AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa1298000

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa1298000 MtrunA17_Chr4g0055361 97.445 274 1 2 1 274 1 268 0.0 548
Msa1298000 MtrunA17_Chr5g0399951 81.560 282 43 3 1 274 1 281 6.51e-168 466
Msa1298000 MtrunA17_Chr1g0153861 98.630 73 1 0 67 139 48 120 7.91e-46 150
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa1298000 AT5G47080.1 75.601 291 50 4 1 274 1 287 4.02e-157 439
Msa1298000 AT4G17640.1 75.874 286 53 5 1 274 1 282 1.49e-156 437
Msa1298000 AT2G44680.1 78.378 259 50 2 15 272 27 280 6.83e-154 431
Msa1298000 AT5G47080.4 74.227 291 49 5 1 274 1 282 3.43e-151 424
Msa1298000 AT4G17640.2 74.476 286 52 6 1 274 1 277 1.23e-150 422
Msa1298000 AT2G44680.2 77.606 259 51 3 15 272 27 279 1.92e-150 422
Msa1298000 AT3G60250.1 74.809 262 55 2 15 274 24 276 1.20e-143 404
Msa1298000 AT3G60250.2 74.046 262 56 3 15 274 24 275 3.74e-140 395
Msa1298000 AT5G47080.2 73.600 250 45 4 1 233 1 246 9.05e-127 361
Msa1298000 AT5G47080.3 73.684 247 47 4 1 233 1 243 4.49e-126 359
Msa1298000 AT2G44680.3 77.273 220 44 2 15 233 27 241 1.01e-123 353
Msa1298000 AT3G60250.3 72.398 221 50 2 15 233 24 235 1.57e-111 322

Find 90 sgRNAs with CRISPR-Local

Find 616 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
TCTTATTATTGGTCAAAATT+AGG 0.097350 8_3:-58655437 Msa1298000:five_prime_UTR
GACATTGATGGAGCTTATTT+TGG 0.142336 8_3:-58652095 Msa1298000:CDS
TTGTTTATTGTAGGTAAAAT+TGG 0.166521 8_3:-58655596 Msa1298000:five_prime_UTR
TTTAGGATTATTCTTATTAT+TGG 0.182218 8_3:-58655448 Msa1298000:five_prime_UTR
TTATGCTCTTGATTTGATTT+TGG 0.200069 8_3:-58653745 Msa1298000:CDS
TCCAAAACTGCCAATATTTC+TGG 0.210478 8_3:-58655213 Msa1298000:intron
CTTATTATTGGTCAAAATTA+GGG 0.221847 8_3:-58655436 Msa1298000:five_prime_UTR
ACCAGAAATATTGGCAGTTT+TGG 0.225014 8_3:+58655212 None:intergenic
GTCTTGTTACAAATTGTATT+TGG 0.226587 8_3:-58651712 Msa1298000:three_prime_UTR
CAAGATGACTTCAACCTTTG+TGG 0.289031 8_3:-58653795 Msa1298000:CDS
TCGGCAGCAGAGATGCTTTA+TGG 0.294830 8_3:-58653443 Msa1298000:CDS
CTTTCGATCCTCCGATTTGT+TGG 0.309378 8_3:+58655362 None:intergenic
TTTGAGACACAAAGTGTGTT+AGG 0.310519 8_3:+58655551 None:intergenic
AGCTTAAACTTCCAGCTTCA+TGG 0.333527 8_3:+58651969 None:intergenic
ATTGGTTTCTCTCTCTTTGT+TGG 0.347659 8_3:+58655266 None:intergenic
GAAATGGGTACCAGAAATAT+TGG 0.362437 8_3:+58655203 None:intergenic
AAGGGGATCCTTGATGGTAT+TGG 0.386002 8_3:+58655248 None:intergenic
TTAAAACGGAAATGAGATAA+TGG 0.387282 8_3:+58651627 None:intergenic
TAAGCTTTCATGAAAGTAAG+AGG 0.390464 8_3:-58651952 Msa1298000:three_prime_UTR
ATATATCCTTCTACCTTAGC+TGG 0.393064 8_3:+58655491 None:intergenic
TCAACTTAAGCAAAGGTAGT+AGG 0.401566 8_3:+58655668 None:intergenic
TGTTTATTGTAGGTAAAATT+GGG 0.403706 8_3:-58655595 Msa1298000:five_prime_UTR
CACCTCTTCTTGATGACATA+TGG 0.412631 8_3:-58652059 Msa1298000:CDS
CACAAAGGTTGAAGTCATCT+TGG 0.419737 8_3:+58653796 None:intergenic
AAGGATACTGCCTTGATACT+TGG 0.428282 8_3:+58653134 None:intergenic
TGACTCTGTCTAGACATTGA+TGG 0.431052 8_3:-58652107 Msa1298000:intron
TTGAAGAAGGGGATCCTTGA+TGG 0.447132 8_3:+58655242 None:intergenic
TCCACAAATTCAACTTAAAA+CGG 0.452059 8_3:+58651613 None:intergenic
TGCCCAAGAGTTTACTGCTC+TGG 0.452889 8_3:-58653252 Msa1298000:CDS
CGACTGACCAACTGGAAGAC+AGG 0.459035 8_3:+58653224 None:intergenic
GGAATGTCCGACTGACCAAC+TGG 0.459318 8_3:+58653216 None:intergenic
TGTCCAGAGCAGTAAACTCT+TGG 0.459857 8_3:+58653249 None:intergenic
TTGGTCAGTCGGACATTCCT+AGG 0.467923 8_3:-58653212 Msa1298000:CDS
CGCTCCTAAAACAAGTAAAA+CGG 0.469487 8_3:+58651839 None:intergenic
AACTTCACAAGCCATGAAGC+TGG 0.476442 8_3:-58651980 Msa1298000:exon
CTCATTTAACTCTTCTGTTG+TGG 0.480534 8_3:-58651919 Msa1298000:three_prime_UTR
TTGAGACACAAAGTGTGTTA+GGG 0.480729 8_3:+58655552 None:intergenic
TCAAGAGCATAATCATAGTA+AGG 0.480913 8_3:+58653756 None:intergenic
TTAGCTGGGAAAATGCCTTT+CGG 0.485073 8_3:+58655506 None:intergenic
ACAAAACGAGTTAATTGAAT+CGG 0.485282 8_3:-58653462 Msa1298000:CDS
TCAACTTCGCGTCCCATCAA+TGG 0.485312 8_3:-58655294 Msa1298000:CDS
AAGCAAAGGAATGGCTGCTA+TGG 0.494974 8_3:-58653393 Msa1298000:intron
GAAGCCGCAGAAACCAGCTC+AGG 0.495797 8_3:-58652030 Msa1298000:CDS
CTGATGGAGAGGACACATCT+TGG 0.496739 8_3:-58653881 Msa1298000:CDS
GTGAAGATCTTTATTATCCT+CGG 0.499504 8_3:-58653158 Msa1298000:CDS
CAGAAGAGTTAAATGAGATT+CGG 0.501653 8_3:+58651925 None:intergenic
CTTGGAACGTAGCCCTGAGC+TGG 0.505575 8_3:+58652017 None:intergenic
AAGTACAAGAACTATGACTT+TGG 0.513375 8_3:-58653279 Msa1298000:CDS
AATTCAATGAGCAAGTGCTT+AGG 0.513437 8_3:-58651756 Msa1298000:three_prime_UTR
TGGTTCTGCCTCCAACAAAT+CGG 0.517982 8_3:-58655373 Msa1298000:CDS
AGGACACATCTTGGATCTCA+TGG 0.519032 8_3:-58653872 Msa1298000:CDS
GTCTCAAATCTACAACCAAA+AGG 0.520752 8_3:-58655536 Msa1298000:five_prime_UTR
TCGATCCTCCGATTTGTTGG+AGG 0.523491 8_3:+58655365 None:intergenic
GTCCAGAGCAGTAAACTCTT+GGG 0.524198 8_3:+58653250 None:intergenic
TTGGATGTTGAATCCTCTCA+TGG 0.536194 8_3:-58653726 Msa1298000:intron
TATCCTCGGTCCAAGTATCA+AGG 0.539508 8_3:-58653144 Msa1298000:CDS
CTAATTCTCAACTTAAGCAA+AGG 0.539634 8_3:+58655661 None:intergenic
TTGGAGGATCGTTGAAGAAG+GGG 0.542487 8_3:+58655231 None:intergenic
TTTGGAGGATCGTTGAAGAA+GGG 0.542634 8_3:+58655230 None:intergenic
TCGGATGTGAGTGGTTCTGA+TGG 0.547426 8_3:-58653897 Msa1298000:CDS
TTGATGGGACGCGAAGTTGA+AGG 0.555193 8_3:+58655297 None:intergenic
CATATTGACAAGCAAAGGAA+TGG 0.559392 8_3:-58653402 Msa1298000:CDS
TAATAAAGATCTTCACACCT+AGG 0.564469 8_3:+58653165 None:intergenic
CTGTGAAAATATATTGCCCT+AGG 0.570529 8_3:-58653182 Msa1298000:CDS
GGACAACCCTGTCTTCCAGT+TGG 0.581204 8_3:-58653231 Msa1298000:CDS
TATATCCTTCTACCTTAGCT+GGG 0.584299 8_3:+58655492 None:intergenic
GAGAGAAACCAATACCATCA+AGG 0.584389 8_3:-58655256 Msa1298000:CDS
CATAATCATAGTAAGGCACT+TGG 0.585754 8_3:+58653763 None:intergenic
GTCCATATGTCATCAAGAAG+AGG 0.586772 8_3:+58652057 None:intergenic
TTGAAGCTGAAAGTGAAACT+AGG 0.589169 8_3:+58651778 None:intergenic
GAAGGAAAGCTCACCATGAG+AGG 0.595315 8_3:+58653713 None:intergenic
CTGTCTTCCAGTTGGTCAGT+CGG 0.596296 8_3:-58653223 Msa1298000:CDS
CGTTACATATTGACAAGCAA+AGG 0.597579 8_3:-58653407 Msa1298000:CDS
AATAAAGATCTTCACACCTA+GGG 0.602100 8_3:+58653166 None:intergenic
TATGTCATCAAGAAGAGGTG+TGG 0.608315 8_3:+58652062 None:intergenic
TGAAACAGACAGTGAAGAGT+CGG 0.609801 8_3:-58653916 Msa1298000:CDS
TTGATCCGCTGAATGCTGCA+AGG 0.612618 8_3:+58651892 None:intergenic
GTACTCCTTGCAGCATTCAG+CGG 0.625181 8_3:-58651897 Msa1298000:three_prime_UTR
TAGCCCTGAGCTGGTTTCTG+CGG 0.627243 8_3:+58652026 None:intergenic
AAGCCGCAGAAACCAGCTCA+GGG 0.638099 8_3:-58652029 Msa1298000:CDS
GACTGACCAACTGGAAGACA+GGG 0.638452 8_3:+58653225 None:intergenic
CTGCCTTGATACTTGGACCG+AGG 0.643410 8_3:+58653141 None:intergenic
AGTGAAGAGTCGGATGTGAG+TGG 0.651799 8_3:-58653906 Msa1298000:CDS
CCAAAAGGAAAATAGCCGAA+AGG 0.654665 8_3:-58655521 Msa1298000:five_prime_UTR
AAAATGTACAAAGGTCGTGG+TGG 0.670283 8_3:-58655393 Msa1298000:CDS
CTTGGCTGCTCAATCCACAA+AGG 0.670694 8_3:+58653781 None:intergenic
TTCTGCCTCCAACAAATCGG+AGG 0.672720 8_3:-58655370 Msa1298000:CDS
TCATGGTTCTGCAATCTCAG+AGG 0.675059 8_3:-58653855 Msa1298000:CDS
TGTGAGTGGTTCTGATGGAG+AGG 0.687843 8_3:-58653892 Msa1298000:CDS
CATAGGTGATATGTTCACAG+AGG 0.751923 8_3:-58653486 Msa1298000:intron

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!!! TAATTTTGTGATTTTTTTTT+GGG - chr8_3:58652183-58652202 Msa1298000:intron 10.0%
!! TAATTAAGTTTGATTAATTT+AGG - chr8_3:58652282-58652301 Msa1298000:intron 10.0%
!!! TATCATTTTTTTTTTTTGAA+TGG + chr8_3:58653034-58653053 None:intergenic 10.0%
!! AAAATAAAAAATAACTGAAA+AGG + chr8_3:58653736-58653755 None:intergenic 10.0%
!!! TAATTTTGTGATTTTTTTTT+GGG - chr8_3:58652183-58652202 Msa1298000:intron 10.0%
!! TAATTAAGTTTGATTAATTT+AGG - chr8_3:58652282-58652301 Msa1298000:intron 10.0%
!!! TATCATTTTTTTTTTTTGAA+TGG + chr8_3:58653034-58653053 None:intergenic 10.0%
!! AAAATAAAAAATAACTGAAA+AGG + chr8_3:58653736-58653755 None:intergenic 10.0%
!!! ATCATGATATAATTGATTTT+AGG - chr8_3:58651811-58651830 Msa1298000:three_prime_UTR 15.0%
!!! TTTAGGATTATTCTTATTAT+TGG - chr8_3:58651828-58651847 Msa1298000:three_prime_UTR 15.0%
!!! GAAATTAAAGATTTTGAATA+CGG + chr8_3:58652124-58652143 None:intergenic 15.0%
!! CAAAAAAAAATCACAAAATT+AGG + chr8_3:58652184-58652203 None:intergenic 15.0%
!!! CTAATTTTGTGATTTTTTTT+TGG - chr8_3:58652182-58652201 Msa1298000:intron 15.0%
!! CAGAAAGAAAAAAAAAAATT+GGG + chr8_3:58652426-58652445 None:intergenic 15.0%
!!! CAATTTTTTTTTTTCTTTCT+GGG - chr8_3:58652425-58652444 Msa1298000:intron 15.0%
!! ATCTATAAAGAAATAAACAA+AGG + chr8_3:58653000-58653019 None:intergenic 15.0%
!!! AAAATATCCTTTATTTGAAA+GGG + chr8_3:58653174-58653193 None:intergenic 15.0%
!!! AAAAATATCCTTTATTTGAA+AGG + chr8_3:58653175-58653194 None:intergenic 15.0%
!!! TATTGAATTTTATTTTGTCA+TGG - chr8_3:58654178-58654197 Msa1298000:intron 15.0%
!!! TATTTTTTAGTATACCATTA+TGG + chr8_3:58654559-58654578 None:intergenic 15.0%
!!! TTTTGGAATTGTAAATTTTT+TGG - chr8_3:58654831-58654850 Msa1298000:intron 15.0%
!! ATATCATGATTAAAAAACTA+TGG + chr8_3:58655046-58655065 None:intergenic 15.0%
!! ATGATATTTATATTAACACT+GGG - chr8_3:58655059-58655078 Msa1298000:intron 15.0%
!!! ATCATGATATAATTGATTTT+AGG - chr8_3:58651811-58651830 Msa1298000:three_prime_UTR 15.0%
!!! TTTAGGATTATTCTTATTAT+TGG - chr8_3:58651828-58651847 Msa1298000:three_prime_UTR 15.0%
!!! GAAATTAAAGATTTTGAATA+CGG + chr8_3:58652124-58652143 None:intergenic 15.0%
!! CAAAAAAAAATCACAAAATT+AGG + chr8_3:58652184-58652203 None:intergenic 15.0%
!!! CTAATTTTGTGATTTTTTTT+TGG - chr8_3:58652182-58652201 Msa1298000:intron 15.0%
!! CAGAAAGAAAAAAAAAAATT+GGG + chr8_3:58652426-58652445 None:intergenic 15.0%
!!! CAATTTTTTTTTTTCTTTCT+GGG - chr8_3:58652425-58652444 Msa1298000:intron 15.0%
!! ATCTATAAAGAAATAAACAA+AGG + chr8_3:58653000-58653019 None:intergenic 15.0%
!!! AAAATATCCTTTATTTGAAA+GGG + chr8_3:58653174-58653193 None:intergenic 15.0%
!!! AAAAATATCCTTTATTTGAA+AGG + chr8_3:58653175-58653194 None:intergenic 15.0%
!!! TATTGAATTTTATTTTGTCA+TGG - chr8_3:58654178-58654197 Msa1298000:intron 15.0%
!!! TATTTTTTAGTATACCATTA+TGG + chr8_3:58654559-58654578 None:intergenic 15.0%
!!! TTTTGGAATTGTAAATTTTT+TGG - chr8_3:58654831-58654850 Msa1298000:intron 15.0%
!! ATATCATGATTAAAAAACTA+TGG + chr8_3:58655046-58655065 None:intergenic 15.0%
!! ATGATATTTATATTAACACT+GGG - chr8_3:58655059-58655078 Msa1298000:intron 15.0%
!!! AATTGTGTTTTGTTTATTGT+AGG - chr8_3:58651671-58651690 Msa1298000:three_prime_UTR 20.0%
!! TTGTTTATTGTAGGTAAAAT+TGG - chr8_3:58651680-58651699 Msa1298000:three_prime_UTR 20.0%
!! TGTTTATTGTAGGTAAAATT+GGG - chr8_3:58651681-58651700 Msa1298000:three_prime_UTR 20.0%
!! TCTTATTATTGGTCAAAATT+AGG - chr8_3:58651839-58651858 Msa1298000:three_prime_UTR 20.0%
!! CTTATTATTGGTCAAAATTA+GGG - chr8_3:58651840-58651859 Msa1298000:three_prime_UTR 20.0%
!!! AATAGTTTTGGATAAGAAAT+GGG + chr8_3:58652091-58652110 None:intergenic 20.0%
!! AATTAGGTCATAAAAAAAGA+GGG + chr8_3:58652168-58652187 None:intergenic 20.0%
!! AAATTAGGTCATAAAAAAAG+AGG + chr8_3:58652169-58652188 None:intergenic 20.0%
!! CCAGAAAGAAAAAAAAAAAT+TGG + chr8_3:58652427-58652446 None:intergenic 20.0%
!!! CCAATTTTTTTTTTTCTTTC+TGG - chr8_3:58652424-58652443 Msa1298000:intron 20.0%
!! CTATAATGTACTATAAAGTA+TGG - chr8_3:58652453-58652472 Msa1298000:intron 20.0%
!! ACTCTAAACAAAAACATTAA+CGG + chr8_3:58652937-58652956 None:intergenic 20.0%
!! ATAAATCCAACAAAATATGA+AGG + chr8_3:58653584-58653603 None:intergenic 20.0%
!! ACTTAACTTTGATTCTTATT+TGG - chr8_3:58653651-58653670 Msa1298000:intron 20.0%
!! TCAATAATTGATATGTCATA+AGG + chr8_3:58654164-58654183 None:intergenic 20.0%
!! TAAAAATACCTATACCTAAA+AGG + chr8_3:58654344-58654363 None:intergenic 20.0%
!!! ACTACAAACTCAATAAATTT+TGG - chr8_3:58654478-58654497 Msa1298000:intron 20.0%
!! AATTTACAATTCCAAAAAAC+TGG + chr8_3:58654828-58654847 None:intergenic 20.0%
!! CACAATAATGTTAAGAAATT+TGG - chr8_3:58654959-58654978 Msa1298000:intron 20.0%
!! CATGATATTTATATTAACAC+TGG - chr8_3:58655058-58655077 Msa1298000:intron 20.0%
!!! TATATTTTACTGGTTTGAAA+AGG + chr8_3:58655412-58655431 None:intergenic 20.0%
!!! AATTGTGTTTTGTTTATTGT+AGG - chr8_3:58651671-58651690 Msa1298000:three_prime_UTR 20.0%
!! TTGTTTATTGTAGGTAAAAT+TGG - chr8_3:58651680-58651699 Msa1298000:three_prime_UTR 20.0%
!! TGTTTATTGTAGGTAAAATT+GGG - chr8_3:58651681-58651700 Msa1298000:three_prime_UTR 20.0%
!! TCTTATTATTGGTCAAAATT+AGG - chr8_3:58651839-58651858 Msa1298000:three_prime_UTR 20.0%
!! CTTATTATTGGTCAAAATTA+GGG - chr8_3:58651840-58651859 Msa1298000:three_prime_UTR 20.0%
!!! AATAGTTTTGGATAAGAAAT+GGG + chr8_3:58652091-58652110 None:intergenic 20.0%
!! AATTAGGTCATAAAAAAAGA+GGG + chr8_3:58652168-58652187 None:intergenic 20.0%
!! AAATTAGGTCATAAAAAAAG+AGG + chr8_3:58652169-58652188 None:intergenic 20.0%
!! CCAGAAAGAAAAAAAAAAAT+TGG + chr8_3:58652427-58652446 None:intergenic 20.0%
!!! CCAATTTTTTTTTTTCTTTC+TGG - chr8_3:58652424-58652443 Msa1298000:intron 20.0%
!! CTATAATGTACTATAAAGTA+TGG - chr8_3:58652453-58652472 Msa1298000:intron 20.0%
!! ACTCTAAACAAAAACATTAA+CGG + chr8_3:58652937-58652956 None:intergenic 20.0%
!! ATAAATCCAACAAAATATGA+AGG + chr8_3:58653584-58653603 None:intergenic 20.0%
!! ACTTAACTTTGATTCTTATT+TGG - chr8_3:58653651-58653670 Msa1298000:intron 20.0%
!! TCAATAATTGATATGTCATA+AGG + chr8_3:58654164-58654183 None:intergenic 20.0%
!! TAAAAATACCTATACCTAAA+AGG + chr8_3:58654344-58654363 None:intergenic 20.0%
!!! ACTACAAACTCAATAAATTT+TGG - chr8_3:58654478-58654497 Msa1298000:intron 20.0%
!! AATTTACAATTCCAAAAAAC+TGG + chr8_3:58654828-58654847 None:intergenic 20.0%
!! CACAATAATGTTAAGAAATT+TGG - chr8_3:58654959-58654978 Msa1298000:intron 20.0%
!! CATGATATTTATATTAACAC+TGG - chr8_3:58655058-58655077 Msa1298000:intron 20.0%
!!! TATATTTTACTGGTTTGAAA+AGG + chr8_3:58655412-58655431 None:intergenic 20.0%
! TTCGAAGAAAAAATGTACAA+AGG - chr8_3:58651874-58651893 Msa1298000:three_prime_UTR 25.0%
!!! GAATAGTTTTGGATAAGAAA+TGG + chr8_3:58652092-58652111 None:intergenic 25.0%
!! GGAAACATAAAGAATAGTTT+TGG + chr8_3:58652103-58652122 None:intergenic 25.0%
!!! TTTTTGGGAATTTTTGTTTG+TGG - chr8_3:58652198-58652217 Msa1298000:intron 25.0%
! TACCCTAATATGATTGAATT+GGG - chr8_3:58652241-58652260 Msa1298000:intron 25.0%
! ATCCCAATTCAATCATATTA+GGG + chr8_3:58652246-58652265 None:intergenic 25.0%
! AATCCCAATTCAATCATATT+AGG + chr8_3:58652247-58652266 None:intergenic 25.0%
!! TTTTAGACTAGTGGAATATT+TGG - chr8_3:58652318-58652337 Msa1298000:intron 25.0%
! TTTAGACTAGTGGAATATTT+GGG - chr8_3:58652319-58652338 Msa1298000:intron 25.0%
!! TGAGAGTATGATATTATTTG+CGG - chr8_3:58653219-58653238 Msa1298000:CDS 25.0%
!!! TTATGCTCTTGATTTGATTT+TGG - chr8_3:58653531-58653550 Msa1298000:intron 25.0%
! ATGGTTTAATTGGAATTCAT+AGG - chr8_3:58653773-58653792 Msa1298000:CDS 25.0%
! ACAAAACGAGTTAATTGAAT+CGG - chr8_3:58653814-58653833 Msa1298000:CDS 25.0%
! TAATTAAGTAGTGTGTTTGT+AGG - chr8_3:58654312-58654331 Msa1298000:intron 25.0%
!! AGAAAAAAATGATTTGCATG+TGG - chr8_3:58654411-58654430 Msa1298000:intron 25.0%
!! GAAAAAAATGATTTGCATGT+GGG - chr8_3:58654412-58654431 Msa1298000:intron 25.0%
! TTTGTAGTAGTTCAAACATA+TGG + chr8_3:58654466-58654485 None:intergenic 25.0%
! TGAAAATATTTCTTGTGCTT+GGG - chr8_3:58654501-58654520 Msa1298000:intron 25.0%
! TATGCAAGATATTCATTGTA+TGG + chr8_3:58654585-58654604 None:intergenic 25.0%
! AATATCTTGCATATGCATTA+TGG - chr8_3:58654592-58654611 Msa1298000:intron 25.0%
! ATATCTTGCATATGCATTAT+GGG - chr8_3:58654593-58654612 Msa1298000:intron 25.0%
!!! TTTTCTGAAAGAAGGAAAAA+TGG + chr8_3:58654700-58654719 None:intergenic 25.0%
!!! AGATATAGTTTTCTGAAAGA+AGG + chr8_3:58654708-58654727 None:intergenic 25.0%
! AACATTAGACAAAAAACAGA+AGG + chr8_3:58654864-58654883 None:intergenic 25.0%
! GAAATCAAGCTTAAAAACAA+TGG + chr8_3:58654985-58655004 None:intergenic 25.0%
! TATTTATATTAACACTGGGA+TGG - chr8_3:58655063-58655082 Msa1298000:intron 25.0%
!! GTTTTATGATATTCATGTTC+TGG - chr8_3:58655085-58655104 Msa1298000:intron 25.0%
! ATAATTGTGGTTAGAATTGT+TGG - chr8_3:58655112-58655131 Msa1298000:intron 25.0%
!! GTCTTGTTACAAATTGTATT+TGG - chr8_3:58655564-58655583 Msa1298000:five_prime_UTR 25.0%
! ATCAGAGACAAAAAACATAA+AGG + chr8_3:58655596-58655615 None:intergenic 25.0%
! TTAAAACGGAAATGAGATAA+TGG + chr8_3:58655652-58655671 None:intergenic 25.0%
! TCCACAAATTCAACTTAAAA+CGG + chr8_3:58655666-58655685 None:intergenic 25.0%
! TTCGAAGAAAAAATGTACAA+AGG - chr8_3:58651874-58651893 Msa1298000:three_prime_UTR 25.0%
!!! GAATAGTTTTGGATAAGAAA+TGG + chr8_3:58652092-58652111 None:intergenic 25.0%
!! GGAAACATAAAGAATAGTTT+TGG + chr8_3:58652103-58652122 None:intergenic 25.0%
!!! TTTTTGGGAATTTTTGTTTG+TGG - chr8_3:58652198-58652217 Msa1298000:intron 25.0%
! TACCCTAATATGATTGAATT+GGG - chr8_3:58652241-58652260 Msa1298000:intron 25.0%
! ATCCCAATTCAATCATATTA+GGG + chr8_3:58652246-58652265 None:intergenic 25.0%
! AATCCCAATTCAATCATATT+AGG + chr8_3:58652247-58652266 None:intergenic 25.0%
!! TTTTAGACTAGTGGAATATT+TGG - chr8_3:58652318-58652337 Msa1298000:intron 25.0%
! TTTAGACTAGTGGAATATTT+GGG - chr8_3:58652319-58652338 Msa1298000:intron 25.0%
!! TGAGAGTATGATATTATTTG+CGG - chr8_3:58653219-58653238 Msa1298000:CDS 25.0%
!!! TTATGCTCTTGATTTGATTT+TGG - chr8_3:58653531-58653550 Msa1298000:intron 25.0%
! ATGGTTTAATTGGAATTCAT+AGG - chr8_3:58653773-58653792 Msa1298000:CDS 25.0%
! ACAAAACGAGTTAATTGAAT+CGG - chr8_3:58653814-58653833 Msa1298000:CDS 25.0%
! TAATTAAGTAGTGTGTTTGT+AGG - chr8_3:58654312-58654331 Msa1298000:intron 25.0%
!! AGAAAAAAATGATTTGCATG+TGG - chr8_3:58654411-58654430 Msa1298000:intron 25.0%
!! GAAAAAAATGATTTGCATGT+GGG - chr8_3:58654412-58654431 Msa1298000:intron 25.0%
! TTTGTAGTAGTTCAAACATA+TGG + chr8_3:58654466-58654485 None:intergenic 25.0%
! TGAAAATATTTCTTGTGCTT+GGG - chr8_3:58654501-58654520 Msa1298000:intron 25.0%
! TATGCAAGATATTCATTGTA+TGG + chr8_3:58654585-58654604 None:intergenic 25.0%
! AATATCTTGCATATGCATTA+TGG - chr8_3:58654592-58654611 Msa1298000:intron 25.0%
! ATATCTTGCATATGCATTAT+GGG - chr8_3:58654593-58654612 Msa1298000:intron 25.0%
!!! TTTTCTGAAAGAAGGAAAAA+TGG + chr8_3:58654700-58654719 None:intergenic 25.0%
!!! AGATATAGTTTTCTGAAAGA+AGG + chr8_3:58654708-58654727 None:intergenic 25.0%
! AACATTAGACAAAAAACAGA+AGG + chr8_3:58654864-58654883 None:intergenic 25.0%
! GAAATCAAGCTTAAAAACAA+TGG + chr8_3:58654985-58655004 None:intergenic 25.0%
! TATTTATATTAACACTGGGA+TGG - chr8_3:58655063-58655082 Msa1298000:intron 25.0%
!! GTTTTATGATATTCATGTTC+TGG - chr8_3:58655085-58655104 Msa1298000:intron 25.0%
! ATAATTGTGGTTAGAATTGT+TGG - chr8_3:58655112-58655131 Msa1298000:intron 25.0%
!! GTCTTGTTACAAATTGTATT+TGG - chr8_3:58655564-58655583 Msa1298000:five_prime_UTR 25.0%
! ATCAGAGACAAAAAACATAA+AGG + chr8_3:58655596-58655615 None:intergenic 25.0%
! TTAAAACGGAAATGAGATAA+TGG + chr8_3:58655652-58655671 None:intergenic 25.0%
! TCCACAAATTCAACTTAAAA+CGG + chr8_3:58655666-58655685 None:intergenic 25.0%
CTAATTCTCAACTTAAGCAA+AGG + chr8_3:58651618-58651637 None:intergenic 30.0%
!!! AGGGTTTTTGTTTTTGATGA+GGG + chr8_3:58651708-58651727 None:intergenic 30.0%
!!! TAGGGTTTTTGTTTTTGATG+AGG + chr8_3:58651709-58651728 None:intergenic 30.0%
GTACCCTAATATGATTGAAT+TGG - chr8_3:58652240-58652259 Msa1298000:intron 30.0%
TGATTGAATTGGGATTTAGA+TGG - chr8_3:58652251-58652270 Msa1298000:intron 30.0%
!! TGATTCATGTTTTAGACTAG+TGG - chr8_3:58652309-58652328 Msa1298000:intron 30.0%
ACAAAAACATTAACGGTACA+AGG + chr8_3:58652930-58652949 None:intergenic 30.0%
AAGGTTACAAAGAGTTTAGA+GGG + chr8_3:58652981-58653000 None:intergenic 30.0%
AAAGGTTACAAAGAGTTTAG+AGG + chr8_3:58652982-58653001 None:intergenic 30.0%
! AACATGGACAAATATTTTCC+TGG + chr8_3:58653088-58653107 None:intergenic 30.0%
TTCTCTCCTTTATATCTTCT+AGG - chr8_3:58653115-58653134 Msa1298000:intron 30.0%
TCTCTCCTTTATATCTTCTA+GGG - chr8_3:58653116-58653135 Msa1298000:intron 30.0%
TCTCTTTCCCTTTCAAATAA+AGG - chr8_3:58653164-58653183 Msa1298000:CDS 30.0%
TTACAATATGAGAGAGATTG+AGG - chr8_3:58653257-58653276 Msa1298000:CDS 30.0%
TACAATATGAGAGAGATTGA+GGG - chr8_3:58653258-58653277 Msa1298000:CDS 30.0%
!!! TTAGTTTTGCATTTATGCGT+TGG - chr8_3:58653324-58653343 Msa1298000:intron 30.0%
! TCAAGAGCATAATCATAGTA+AGG + chr8_3:58653523-58653542 None:intergenic 30.0%
! AGCTTTCCTTCATATTTTGT+TGG - chr8_3:58653575-58653594 Msa1298000:intron 30.0%
TTGGATTTATTGTACAAGCA+TGG - chr8_3:58653594-58653613 Msa1298000:intron 30.0%
TTATTGTACAACTGCTTCTA+TGG - chr8_3:58653754-58653773 Msa1298000:CDS 30.0%
AACTGCTTCTATGGTTTAAT+TGG - chr8_3:58653763-58653782 Msa1298000:CDS 30.0%
AAGTACAAGAACTATGACTT+TGG - chr8_3:58653997-58654016 Msa1298000:intron 30.0%
AATAAAGATCTTCACACCTA+GGG + chr8_3:58654113-58654132 None:intergenic 30.0%
TAATAAAGATCTTCACACCT+AGG + chr8_3:58654114-58654133 None:intergenic 30.0%
GTGAAGATCTTTATTATCCT+CGG - chr8_3:58654118-58654137 Msa1298000:intron 30.0%
AAAGCAAGGAAAAAAAAGTG+AGG + chr8_3:58654262-58654281 None:intergenic 30.0%
TCAAATGAAACTCAAAAGCA+AGG + chr8_3:58654276-58654295 None:intergenic 30.0%
AATATATGCCAGCTAGTATT+TGG - chr8_3:58654381-58654400 Msa1298000:intron 30.0%
GTGAAAATATTTCTTGTGCT+TGG - chr8_3:58654500-58654519 Msa1298000:intron 30.0%
TATCTTGCATATGCATTATG+GGG - chr8_3:58654594-58654613 Msa1298000:intron 30.0%
!! TTTGTTTAGTATCGATTCCA+TGG - chr8_3:58654923-58654942 Msa1298000:intron 30.0%
! ATGTTCTGGCTATATAATTG+TGG - chr8_3:58655099-58655118 Msa1298000:intron 30.0%
TAAGCTTTCATGAAAGTAAG+AGG - chr8_3:58655324-58655343 Msa1298000:CDS 30.0%
CAGAAGAGTTAAATGAGATT+CGG + chr8_3:58655354-58655373 None:intergenic 30.0%
! AACGGATGTCTATATTTTAC+TGG + chr8_3:58655422-58655441 None:intergenic 30.0%
!! ACATCCGTTTTACTTGTTTT+AGG - chr8_3:58655433-58655452 Msa1298000:five_prime_UTR 30.0%
!!! TCCGTTTTAAGTTGAATTTG+TGG - chr8_3:58655662-58655681 Msa1298000:five_prime_UTR 30.0%
CTAATTCTCAACTTAAGCAA+AGG + chr8_3:58651618-58651637 None:intergenic 30.0%
!!! AGGGTTTTTGTTTTTGATGA+GGG + chr8_3:58651708-58651727 None:intergenic 30.0%
!!! TAGGGTTTTTGTTTTTGATG+AGG + chr8_3:58651709-58651728 None:intergenic 30.0%
GTACCCTAATATGATTGAAT+TGG - chr8_3:58652240-58652259 Msa1298000:intron 30.0%
TGATTGAATTGGGATTTAGA+TGG - chr8_3:58652251-58652270 Msa1298000:intron 30.0%
!! TGATTCATGTTTTAGACTAG+TGG - chr8_3:58652309-58652328 Msa1298000:intron 30.0%
ACAAAAACATTAACGGTACA+AGG + chr8_3:58652930-58652949 None:intergenic 30.0%
AAGGTTACAAAGAGTTTAGA+GGG + chr8_3:58652981-58653000 None:intergenic 30.0%
AAAGGTTACAAAGAGTTTAG+AGG + chr8_3:58652982-58653001 None:intergenic 30.0%
! AACATGGACAAATATTTTCC+TGG + chr8_3:58653088-58653107 None:intergenic 30.0%
TTCTCTCCTTTATATCTTCT+AGG - chr8_3:58653115-58653134 Msa1298000:intron 30.0%
TCTCTCCTTTATATCTTCTA+GGG - chr8_3:58653116-58653135 Msa1298000:intron 30.0%
TCTCTTTCCCTTTCAAATAA+AGG - chr8_3:58653164-58653183 Msa1298000:CDS 30.0%
TTACAATATGAGAGAGATTG+AGG - chr8_3:58653257-58653276 Msa1298000:CDS 30.0%
TACAATATGAGAGAGATTGA+GGG - chr8_3:58653258-58653277 Msa1298000:CDS 30.0%
!!! TTAGTTTTGCATTTATGCGT+TGG - chr8_3:58653324-58653343 Msa1298000:intron 30.0%
! TCAAGAGCATAATCATAGTA+AGG + chr8_3:58653523-58653542 None:intergenic 30.0%
! AGCTTTCCTTCATATTTTGT+TGG - chr8_3:58653575-58653594 Msa1298000:intron 30.0%
TTGGATTTATTGTACAAGCA+TGG - chr8_3:58653594-58653613 Msa1298000:intron 30.0%
TTATTGTACAACTGCTTCTA+TGG - chr8_3:58653754-58653773 Msa1298000:CDS 30.0%
AACTGCTTCTATGGTTTAAT+TGG - chr8_3:58653763-58653782 Msa1298000:CDS 30.0%
AAGTACAAGAACTATGACTT+TGG - chr8_3:58653997-58654016 Msa1298000:intron 30.0%
AATAAAGATCTTCACACCTA+GGG + chr8_3:58654113-58654132 None:intergenic 30.0%
TAATAAAGATCTTCACACCT+AGG + chr8_3:58654114-58654133 None:intergenic 30.0%
GTGAAGATCTTTATTATCCT+CGG - chr8_3:58654118-58654137 Msa1298000:intron 30.0%
AAAGCAAGGAAAAAAAAGTG+AGG + chr8_3:58654262-58654281 None:intergenic 30.0%
TCAAATGAAACTCAAAAGCA+AGG + chr8_3:58654276-58654295 None:intergenic 30.0%
AATATATGCCAGCTAGTATT+TGG - chr8_3:58654381-58654400 Msa1298000:intron 30.0%
GTGAAAATATTTCTTGTGCT+TGG - chr8_3:58654500-58654519 Msa1298000:intron 30.0%
TATCTTGCATATGCATTATG+GGG - chr8_3:58654594-58654613 Msa1298000:intron 30.0%
!! TTTGTTTAGTATCGATTCCA+TGG - chr8_3:58654923-58654942 Msa1298000:intron 30.0%
! ATGTTCTGGCTATATAATTG+TGG - chr8_3:58655099-58655118 Msa1298000:intron 30.0%
TAAGCTTTCATGAAAGTAAG+AGG - chr8_3:58655324-58655343 Msa1298000:CDS 30.0%
CAGAAGAGTTAAATGAGATT+CGG + chr8_3:58655354-58655373 None:intergenic 30.0%
! AACGGATGTCTATATTTTAC+TGG + chr8_3:58655422-58655441 None:intergenic 30.0%
!! ACATCCGTTTTACTTGTTTT+AGG - chr8_3:58655433-58655452 Msa1298000:five_prime_UTR 30.0%
!!! TCCGTTTTAAGTTGAATTTG+TGG - chr8_3:58655662-58655681 Msa1298000:five_prime_UTR 30.0%
TCAACTTAAGCAAAGGTAGT+AGG + chr8_3:58651611-58651630 None:intergenic 35.0%
TTGAGACACAAAGTGTGTTA+GGG + chr8_3:58651727-58651746 None:intergenic 35.0%
! TTTGAGACACAAAGTGTGTT+AGG + chr8_3:58651728-58651747 None:intergenic 35.0%
GTCTCAAATCTACAACCAAA+AGG - chr8_3:58651740-58651759 Msa1298000:three_prime_UTR 35.0%
TATATCCTTCTACCTTAGCT+GGG + chr8_3:58651787-58651806 None:intergenic 35.0%
ATATATCCTTCTACCTTAGC+TGG + chr8_3:58651788-58651807 None:intergenic 35.0%
GAAAAAATGTACAAAGGTCG+TGG - chr8_3:58651880-58651899 Msa1298000:three_prime_UTR 35.0%
!!! TTGTTGGTTTTGCCATTGAT+GGG + chr8_3:58651997-58652016 None:intergenic 35.0%
!!! TTTGTTGGTTTTGCCATTGA+TGG + chr8_3:58651998-58652017 None:intergenic 35.0%
! ATTGGTTTCTCTCTCTTTGT+TGG + chr8_3:58652013-58652032 None:intergenic 35.0%
!! AGAAATATTGGCAGTTTTGG+AGG + chr8_3:58652064-58652083 None:intergenic 35.0%
TCCAAAACTGCCAATATTTC+TGG - chr8_3:58652063-58652082 Msa1298000:CDS 35.0%
! ACCAGAAATATTGGCAGTTT+TGG + chr8_3:58652067-58652086 None:intergenic 35.0%
GAAATGGGTACCAGAAATAT+TGG + chr8_3:58652076-58652095 None:intergenic 35.0%
ATTGGGATTTAGATGGTTGT+TGG - chr8_3:58652258-58652277 Msa1298000:intron 35.0%
AAAAAAAATTGGGTCCGAAG+TGG + chr8_3:58652416-58652435 None:intergenic 35.0%
TAGAACCCAATTTGTGCAAA+CGG - chr8_3:58652492-58652511 Msa1298000:intron 35.0%
GGAAGCTTAGAGGTAAATTA+GGG - chr8_3:58652513-58652532 Msa1298000:intron 35.0%
TATGTTGTTGTGTGATCGAT+CGG - chr8_3:58652569-58652588 Msa1298000:intron 35.0%
GTGACTTATCATTTCCGATA+AGG - chr8_3:58652603-58652622 Msa1298000:intron 35.0%
GTGTTCAGTGATTACCTTAT+CGG + chr8_3:58652620-58652639 None:intergenic 35.0%
! CTGGTGATTTTTGTCTTTAC+TGG - chr8_3:58652890-58652909 Msa1298000:intron 35.0%
AGGTTACAAAGAGTTTAGAG+GGG + chr8_3:58652980-58652999 None:intergenic 35.0%
! ATATTTTCCTGGAGCATACA+AGG + chr8_3:58653077-58653096 None:intergenic 35.0%
AGGAACCCTAGAAGATATAA+AGG + chr8_3:58653124-58653143 None:intergenic 35.0%
TAACAAGCAGAAACAGCATA+AGG + chr8_3:58653144-58653163 None:intergenic 35.0%
! AGGAAATGAGTTCTTTTGTG+AGG - chr8_3:58653441-58653460 Msa1298000:CDS 35.0%
! CATAATCATAGTAAGGCACT+TGG + chr8_3:58653516-58653535 None:intergenic 35.0%
CGTTACATATTGACAAGCAA+AGG - chr8_3:58653869-58653888 Msa1298000:CDS 35.0%
CATATTGACAAGCAAAGGAA+TGG - chr8_3:58653874-58653893 Msa1298000:CDS 35.0%
! CTTTTCATGCTTTACTATCC+AGG - chr8_3:58653931-58653950 Msa1298000:intron 35.0%
TGTTAACAATGTCAATCTCC+TGG + chr8_3:58653952-58653971 None:intergenic 35.0%
! ATTTTCACAGTACTTGACCT+AGG + chr8_3:58654084-58654103 None:intergenic 35.0%
CTGTGAAAATATATTGCCCT+AGG - chr8_3:58654094-58654113 Msa1298000:intron 35.0%
AAATAGCTTCAGTGACATAG+TGG + chr8_3:58654227-58654246 None:intergenic 35.0%
! TTTGTAGGATGTGACCTTTT+AGG - chr8_3:58654327-58654346 Msa1298000:intron 35.0%
TTTCCATACCAAATACTAGC+TGG + chr8_3:58654392-58654411 None:intergenic 35.0%
ATCTTGCATATGCATTATGG+GGG - chr8_3:58654595-58654614 Msa1298000:intron 35.0%
! AGTCAACAAACACTTTTCAG+AGG + chr8_3:58654663-58654682 None:intergenic 35.0%
GGTTACAACAACTAGAAACA+CGG + chr8_3:58654735-58654754 None:intergenic 35.0%
! ATGGCAGTTTCTGAAAACTT+TGG - chr8_3:58654764-58654783 Msa1298000:intron 35.0%
! TGGCAGTTTCTGAAAACTTT+GGG - chr8_3:58654765-58654784 Msa1298000:intron 35.0%
!!! CTGAAAAGTGACCAGTTTTT+TGG - chr8_3:58654814-58654833 Msa1298000:intron 35.0%
! GACATTGATGGAGCTTATTT+TGG - chr8_3:58655181-58655200 Msa1298000:intron 35.0%
AGTTTGAACCCAAAAACTCT+TGG + chr8_3:58655280-58655299 None:intergenic 35.0%
CTCATTTAACTCTTCTGTTG+TGG - chr8_3:58655357-58655376 Msa1298000:CDS 35.0%
CGCTCCTAAAACAAGTAAAA+CGG + chr8_3:58655440-58655459 None:intergenic 35.0%
TTGAAGCTGAAAGTGAAACT+AGG + chr8_3:58655501-58655520 None:intergenic 35.0%
AATTCAATGAGCAAGTGCTT+AGG - chr8_3:58655520-58655539 Msa1298000:five_prime_UTR 35.0%
TCAACTTAAGCAAAGGTAGT+AGG + chr8_3:58651611-58651630 None:intergenic 35.0%
TTGAGACACAAAGTGTGTTA+GGG + chr8_3:58651727-58651746 None:intergenic 35.0%
! TTTGAGACACAAAGTGTGTT+AGG + chr8_3:58651728-58651747 None:intergenic 35.0%
GTCTCAAATCTACAACCAAA+AGG - chr8_3:58651740-58651759 Msa1298000:three_prime_UTR 35.0%
TATATCCTTCTACCTTAGCT+GGG + chr8_3:58651787-58651806 None:intergenic 35.0%
ATATATCCTTCTACCTTAGC+TGG + chr8_3:58651788-58651807 None:intergenic 35.0%
GAAAAAATGTACAAAGGTCG+TGG - chr8_3:58651880-58651899 Msa1298000:three_prime_UTR 35.0%
!!! TTGTTGGTTTTGCCATTGAT+GGG + chr8_3:58651997-58652016 None:intergenic 35.0%
!!! TTTGTTGGTTTTGCCATTGA+TGG + chr8_3:58651998-58652017 None:intergenic 35.0%
! ATTGGTTTCTCTCTCTTTGT+TGG + chr8_3:58652013-58652032 None:intergenic 35.0%
!! AGAAATATTGGCAGTTTTGG+AGG + chr8_3:58652064-58652083 None:intergenic 35.0%
TCCAAAACTGCCAATATTTC+TGG - chr8_3:58652063-58652082 Msa1298000:CDS 35.0%
! ACCAGAAATATTGGCAGTTT+TGG + chr8_3:58652067-58652086 None:intergenic 35.0%
GAAATGGGTACCAGAAATAT+TGG + chr8_3:58652076-58652095 None:intergenic 35.0%
ATTGGGATTTAGATGGTTGT+TGG - chr8_3:58652258-58652277 Msa1298000:intron 35.0%
AAAAAAAATTGGGTCCGAAG+TGG + chr8_3:58652416-58652435 None:intergenic 35.0%
TAGAACCCAATTTGTGCAAA+CGG - chr8_3:58652492-58652511 Msa1298000:intron 35.0%
GGAAGCTTAGAGGTAAATTA+GGG - chr8_3:58652513-58652532 Msa1298000:intron 35.0%
TATGTTGTTGTGTGATCGAT+CGG - chr8_3:58652569-58652588 Msa1298000:intron 35.0%
GTGACTTATCATTTCCGATA+AGG - chr8_3:58652603-58652622 Msa1298000:intron 35.0%
GTGTTCAGTGATTACCTTAT+CGG + chr8_3:58652620-58652639 None:intergenic 35.0%
! CTGGTGATTTTTGTCTTTAC+TGG - chr8_3:58652890-58652909 Msa1298000:intron 35.0%
AGGTTACAAAGAGTTTAGAG+GGG + chr8_3:58652980-58652999 None:intergenic 35.0%
! ATATTTTCCTGGAGCATACA+AGG + chr8_3:58653077-58653096 None:intergenic 35.0%
AGGAACCCTAGAAGATATAA+AGG + chr8_3:58653124-58653143 None:intergenic 35.0%
TAACAAGCAGAAACAGCATA+AGG + chr8_3:58653144-58653163 None:intergenic 35.0%
! AGGAAATGAGTTCTTTTGTG+AGG - chr8_3:58653441-58653460 Msa1298000:CDS 35.0%
! CATAATCATAGTAAGGCACT+TGG + chr8_3:58653516-58653535 None:intergenic 35.0%
CGTTACATATTGACAAGCAA+AGG - chr8_3:58653869-58653888 Msa1298000:CDS 35.0%
CATATTGACAAGCAAAGGAA+TGG - chr8_3:58653874-58653893 Msa1298000:CDS 35.0%
! CTTTTCATGCTTTACTATCC+AGG - chr8_3:58653931-58653950 Msa1298000:intron 35.0%
TGTTAACAATGTCAATCTCC+TGG + chr8_3:58653952-58653971 None:intergenic 35.0%
! ATTTTCACAGTACTTGACCT+AGG + chr8_3:58654084-58654103 None:intergenic 35.0%
CTGTGAAAATATATTGCCCT+AGG - chr8_3:58654094-58654113 Msa1298000:intron 35.0%
AAATAGCTTCAGTGACATAG+TGG + chr8_3:58654227-58654246 None:intergenic 35.0%
! TTTGTAGGATGTGACCTTTT+AGG - chr8_3:58654327-58654346 Msa1298000:intron 35.0%
TTTCCATACCAAATACTAGC+TGG + chr8_3:58654392-58654411 None:intergenic 35.0%
ATCTTGCATATGCATTATGG+GGG - chr8_3:58654595-58654614 Msa1298000:intron 35.0%
! AGTCAACAAACACTTTTCAG+AGG + chr8_3:58654663-58654682 None:intergenic 35.0%
GGTTACAACAACTAGAAACA+CGG + chr8_3:58654735-58654754 None:intergenic 35.0%
! ATGGCAGTTTCTGAAAACTT+TGG - chr8_3:58654764-58654783 Msa1298000:intron 35.0%
! TGGCAGTTTCTGAAAACTTT+GGG - chr8_3:58654765-58654784 Msa1298000:intron 35.0%
!!! CTGAAAAGTGACCAGTTTTT+TGG - chr8_3:58654814-58654833 Msa1298000:intron 35.0%
! GACATTGATGGAGCTTATTT+TGG - chr8_3:58655181-58655200 Msa1298000:intron 35.0%
AGTTTGAACCCAAAAACTCT+TGG + chr8_3:58655280-58655299 None:intergenic 35.0%
CTCATTTAACTCTTCTGTTG+TGG - chr8_3:58655357-58655376 Msa1298000:CDS 35.0%
CGCTCCTAAAACAAGTAAAA+CGG + chr8_3:58655440-58655459 None:intergenic 35.0%
TTGAAGCTGAAAGTGAAACT+AGG + chr8_3:58655501-58655520 None:intergenic 35.0%
AATTCAATGAGCAAGTGCTT+AGG - chr8_3:58655520-58655539 Msa1298000:five_prime_UTR 35.0%
!! CCTTTCGGCTATTTTCCTTT+TGG + chr8_3:58651758-58651777 None:intergenic 40.0%
CCAAAAGGAAAATAGCCGAA+AGG - chr8_3:58651755-58651774 Msa1298000:three_prime_UTR 40.0%
TTAGCTGGGAAAATGCCTTT+CGG + chr8_3:58651773-58651792 None:intergenic 40.0%
! ATTTTCCCAGCTAAGGTAGA+AGG - chr8_3:58651779-58651798 Msa1298000:three_prime_UTR 40.0%
AAAATGTACAAAGGTCGTGG+TGG - chr8_3:58651883-58651902 Msa1298000:three_prime_UTR 40.0%
GAGAGAAACCAATACCATCA+AGG - chr8_3:58652020-58652039 Msa1298000:CDS 40.0%
TTTGGAGGATCGTTGAAGAA+GGG + chr8_3:58652049-58652068 None:intergenic 40.0%
!! TTTTGGAGGATCGTTGAAGA+AGG + chr8_3:58652050-58652069 None:intergenic 40.0%
GATATCCAGTCTATCAAGCT+AGG + chr8_3:58652356-58652375 None:intergenic 40.0%
ACTCACACTTTACAACTTCG+AGG + chr8_3:58652390-58652409 None:intergenic 40.0%
AGCTTCCGTTTGCACAAATT+GGG + chr8_3:58652500-58652519 None:intergenic 40.0%
AAGCTTCCGTTTGCACAAAT+TGG + chr8_3:58652501-58652520 None:intergenic 40.0%
CGGAAGCTTAGAGGTAAATT+AGG - chr8_3:58652512-58652531 Msa1298000:intron 40.0%
AGCTTAGAGGTAAATTAGGG+AGG - chr8_3:58652516-58652535 Msa1298000:intron 40.0%
TTAGAGGTAAATTAGGGAGG+AGG - chr8_3:58652519-58652538 Msa1298000:intron 40.0%
TAGAGGTAAATTAGGGAGGA+GGG - chr8_3:58652520-58652539 Msa1298000:intron 40.0%
ATGTTGTTGTGTGATCGATC+GGG - chr8_3:58652570-58652589 Msa1298000:intron 40.0%
TCTTGATCTTATCCACCAGT+TGG + chr8_3:58652642-58652661 None:intergenic 40.0%
ATAAGATCAAGACCACCTTG+CGG - chr8_3:58652650-58652669 Msa1298000:intron 40.0%
TTCCATATCCTACCTGTAGT+AGG + chr8_3:58652713-58652732 None:intergenic 40.0%
! TTAGAGTACTTCTTGTACCC+TGG - chr8_3:58652950-58652969 Msa1298000:intron 40.0%
! TAGAGTACTTCTTGTACCCT+GGG - chr8_3:58652951-58652970 Msa1298000:intron 40.0%
TTTATCACCTTGTATGCTCC+AGG - chr8_3:58653067-58653086 Msa1298000:intron 40.0%
AGGAGAGAAAAGACAGAACA+TGG + chr8_3:58653104-58653123 None:intergenic 40.0%
TGAAACAGACAGTGAAGAGT+CGG - chr8_3:58653360-58653379 Msa1298000:intron 40.0%
CACAAAGGTTGAAGTCATCT+TGG + chr8_3:58653483-58653502 None:intergenic 40.0%
CAAGATGACTTCAACCTTTG+TGG - chr8_3:58653481-58653500 Msa1298000:CDS 40.0%
TTGGATGTTGAATCCTCTCA+TGG - chr8_3:58653550-58653569 Msa1298000:intron 40.0%
CATAGGTGATATGTTCACAG+AGG - chr8_3:58653790-58653809 Msa1298000:CDS 40.0%
AAGGATACTGCCTTGATACT+TGG + chr8_3:58654145-58654164 None:intergenic 40.0%
!! GGATGTGACCTTTTAGGTAT+AGG - chr8_3:58654333-58654352 Msa1298000:intron 40.0%
ATGCCAGCTAGTATTTGGTA+TGG - chr8_3:58654386-58654405 Msa1298000:intron 40.0%
TATAAACTGCTCTCTGGACA+TGG - chr8_3:58654436-58654455 Msa1298000:intron 40.0%
AAGACTTTGCTGCTCCATAA+TGG - chr8_3:58654542-58654561 Msa1298000:intron 40.0%
CTAGTTGTTGTAACCTCAAG+TGG - chr8_3:58654740-58654759 Msa1298000:intron 40.0%
TGTTGTAACCTCAAGTGGAA+TGG - chr8_3:58654745-58654764 Msa1298000:intron 40.0%
TCAATGTCTAGACAGAGTCA+AGG + chr8_3:58655169-58655188 None:intergenic 40.0%
TGACTCTGTCTAGACATTGA+TGG - chr8_3:58655169-58655188 Msa1298000:intron 40.0%
TATGTCATCAAGAAGAGGTG+TGG + chr8_3:58655217-58655236 None:intergenic 40.0%
! CACCTCTTCTTGATGACATA+TGG - chr8_3:58655217-58655236 Msa1298000:CDS 40.0%
GTCCATATGTCATCAAGAAG+AGG + chr8_3:58655222-58655241 None:intergenic 40.0%
! GCTACGTTCCAAGAGTTTTT+GGG - chr8_3:58655269-58655288 Msa1298000:CDS 40.0%
AGCTTAAACTTCCAGCTTCA+TGG + chr8_3:58655310-58655329 None:intergenic 40.0%
!! CCTTTCGGCTATTTTCCTTT+TGG + chr8_3:58651758-58651777 None:intergenic 40.0%
CCAAAAGGAAAATAGCCGAA+AGG - chr8_3:58651755-58651774 Msa1298000:three_prime_UTR 40.0%
TTAGCTGGGAAAATGCCTTT+CGG + chr8_3:58651773-58651792 None:intergenic 40.0%
! ATTTTCCCAGCTAAGGTAGA+AGG - chr8_3:58651779-58651798 Msa1298000:three_prime_UTR 40.0%
AAAATGTACAAAGGTCGTGG+TGG - chr8_3:58651883-58651902 Msa1298000:three_prime_UTR 40.0%
GAGAGAAACCAATACCATCA+AGG - chr8_3:58652020-58652039 Msa1298000:CDS 40.0%
TTTGGAGGATCGTTGAAGAA+GGG + chr8_3:58652049-58652068 None:intergenic 40.0%
!! TTTTGGAGGATCGTTGAAGA+AGG + chr8_3:58652050-58652069 None:intergenic 40.0%
GATATCCAGTCTATCAAGCT+AGG + chr8_3:58652356-58652375 None:intergenic 40.0%
ACTCACACTTTACAACTTCG+AGG + chr8_3:58652390-58652409 None:intergenic 40.0%
AGCTTCCGTTTGCACAAATT+GGG + chr8_3:58652500-58652519 None:intergenic 40.0%
AAGCTTCCGTTTGCACAAAT+TGG + chr8_3:58652501-58652520 None:intergenic 40.0%
CGGAAGCTTAGAGGTAAATT+AGG - chr8_3:58652512-58652531 Msa1298000:intron 40.0%
AGCTTAGAGGTAAATTAGGG+AGG - chr8_3:58652516-58652535 Msa1298000:intron 40.0%
TTAGAGGTAAATTAGGGAGG+AGG - chr8_3:58652519-58652538 Msa1298000:intron 40.0%
TAGAGGTAAATTAGGGAGGA+GGG - chr8_3:58652520-58652539 Msa1298000:intron 40.0%
ATGTTGTTGTGTGATCGATC+GGG - chr8_3:58652570-58652589 Msa1298000:intron 40.0%
TCTTGATCTTATCCACCAGT+TGG + chr8_3:58652642-58652661 None:intergenic 40.0%
ATAAGATCAAGACCACCTTG+CGG - chr8_3:58652650-58652669 Msa1298000:intron 40.0%
TTCCATATCCTACCTGTAGT+AGG + chr8_3:58652713-58652732 None:intergenic 40.0%
! TTAGAGTACTTCTTGTACCC+TGG - chr8_3:58652950-58652969 Msa1298000:intron 40.0%
! TAGAGTACTTCTTGTACCCT+GGG - chr8_3:58652951-58652970 Msa1298000:intron 40.0%
TTTATCACCTTGTATGCTCC+AGG - chr8_3:58653067-58653086 Msa1298000:intron 40.0%
AGGAGAGAAAAGACAGAACA+TGG + chr8_3:58653104-58653123 None:intergenic 40.0%
TGAAACAGACAGTGAAGAGT+CGG - chr8_3:58653360-58653379 Msa1298000:intron 40.0%
CACAAAGGTTGAAGTCATCT+TGG + chr8_3:58653483-58653502 None:intergenic 40.0%
CAAGATGACTTCAACCTTTG+TGG - chr8_3:58653481-58653500 Msa1298000:CDS 40.0%
TTGGATGTTGAATCCTCTCA+TGG - chr8_3:58653550-58653569 Msa1298000:intron 40.0%
CATAGGTGATATGTTCACAG+AGG - chr8_3:58653790-58653809 Msa1298000:CDS 40.0%
AAGGATACTGCCTTGATACT+TGG + chr8_3:58654145-58654164 None:intergenic 40.0%
!! GGATGTGACCTTTTAGGTAT+AGG - chr8_3:58654333-58654352 Msa1298000:intron 40.0%
ATGCCAGCTAGTATTTGGTA+TGG - chr8_3:58654386-58654405 Msa1298000:intron 40.0%
TATAAACTGCTCTCTGGACA+TGG - chr8_3:58654436-58654455 Msa1298000:intron 40.0%
AAGACTTTGCTGCTCCATAA+TGG - chr8_3:58654542-58654561 Msa1298000:intron 40.0%
CTAGTTGTTGTAACCTCAAG+TGG - chr8_3:58654740-58654759 Msa1298000:intron 40.0%
TGTTGTAACCTCAAGTGGAA+TGG - chr8_3:58654745-58654764 Msa1298000:intron 40.0%
TCAATGTCTAGACAGAGTCA+AGG + chr8_3:58655169-58655188 None:intergenic 40.0%
TGACTCTGTCTAGACATTGA+TGG - chr8_3:58655169-58655188 Msa1298000:intron 40.0%
TATGTCATCAAGAAGAGGTG+TGG + chr8_3:58655217-58655236 None:intergenic 40.0%
! CACCTCTTCTTGATGACATA+TGG - chr8_3:58655217-58655236 Msa1298000:CDS 40.0%
GTCCATATGTCATCAAGAAG+AGG + chr8_3:58655222-58655241 None:intergenic 40.0%
! GCTACGTTCCAAGAGTTTTT+GGG - chr8_3:58655269-58655288 Msa1298000:CDS 40.0%
AGCTTAAACTTCCAGCTTCA+TGG + chr8_3:58655310-58655329 None:intergenic 40.0%
!!! GAAAGGCATTTTCCCAGCTA+AGG - chr8_3:58651772-58651791 Msa1298000:three_prime_UTR 45.0%
! TGGTTCTGCCTCCAACAAAT+CGG - chr8_3:58651903-58651922 Msa1298000:three_prime_UTR 45.0%
! CTTTCGATCCTCCGATTTGT+TGG + chr8_3:58651917-58651936 None:intergenic 45.0%
! AAGGGGATCCTTGATGGTAT+TGG + chr8_3:58652031-58652050 None:intergenic 45.0%
TTGAAGAAGGGGATCCTTGA+TGG + chr8_3:58652037-58652056 None:intergenic 45.0%
TTGGAGGATCGTTGAAGAAG+GGG + chr8_3:58652048-58652067 None:intergenic 45.0%
TGAGACCTAGCTTGATAGAC+TGG - chr8_3:58652348-58652367 Msa1298000:intron 45.0%
ATAGACTGGATATCCTCACC+CGG - chr8_3:58652362-58652381 Msa1298000:intron 45.0%
! AAAGTGTGAGTCTGCCACTT+CGG - chr8_3:58652399-58652418 Msa1298000:intron 45.0%
TTGTGCAAACGGAAGCTTAG+AGG - chr8_3:58652503-58652522 Msa1298000:intron 45.0%
AGAGGTAAATTAGGGAGGAG+GGG - chr8_3:58652521-58652540 Msa1298000:intron 45.0%
!!! GGTTAGGTTGGCTTTTGGTT+TGG - chr8_3:58652546-58652565 Msa1298000:intron 45.0%
GGTAATCACTGAACACCAAC+TGG - chr8_3:58652624-58652643 Msa1298000:intron 45.0%
AATCACTGAACACCAACTGG+TGG - chr8_3:58652627-58652646 Msa1298000:intron 45.0%
TAAGAACCATTTCCGCAAGG+TGG + chr8_3:58652665-58652684 None:intergenic 45.0%
ACCTTGCGGAAATGGTTCTT+AGG - chr8_3:58652664-58652683 Msa1298000:intron 45.0%
CCTTGCGGAAATGGTTCTTA+GGG - chr8_3:58652665-58652684 Msa1298000:intron 45.0%
!! TGGTTCTTAGGGAAGCATTC+TGG - chr8_3:58652676-58652695 Msa1298000:intron 45.0%
GACATTACTGCTCCTACTAC+AGG - chr8_3:58652698-58652717 Msa1298000:intron 45.0%
TTACTGCTCCTACTACAGGT+AGG - chr8_3:58652702-58652721 Msa1298000:intron 45.0%
CTCCTACTACAGGTAGGATA+TGG - chr8_3:58652708-58652727 Msa1298000:intron 45.0%
TCTTTGTCTCGTTCAGCTGA+TGG - chr8_3:58652811-58652830 Msa1298000:intron 45.0%
CTTTGTCTCGTTCAGCTGAT+GGG - chr8_3:58652812-58652831 Msa1298000:intron 45.0%
! GCTGATGGGTAATCTGTTTC+TGG - chr8_3:58652826-58652845 Msa1298000:intron 45.0%
!! TCTGTTTCTGGTGCTTTCCT+TGG - chr8_3:58652838-58652857 Msa1298000:intron 45.0%
!! CTGTTTCTGGTGCTTTCCTT+GGG - chr8_3:58652839-58652858 Msa1298000:intron 45.0%
! CTTTCCTTGGGTTTGGAGTT+GGG - chr8_3:58652851-58652870 Msa1298000:intron 45.0%
! TTTCCTTGGGTTTGGAGTTG+GGG - chr8_3:58652852-58652871 Msa1298000:intron 45.0%
AGGACACATCTTGGATCTCA+TGG - chr8_3:58653404-58653423 Msa1298000:CDS 45.0%
! TCATGGTTCTGCAATCTCAG+AGG - chr8_3:58653421-58653440 Msa1298000:CDS 45.0%
AAGCAAAGGAATGGCTGCTA+TGG - chr8_3:58653883-58653902 Msa1298000:CDS 45.0%
GTCCAGAGCAGTAAACTCTT+GGG + chr8_3:58654029-58654048 None:intergenic 45.0%
TGTCCAGAGCAGTAAACTCT+TGG + chr8_3:58654030-58654049 None:intergenic 45.0%
TATCCTCGGTCCAAGTATCA+AGG - chr8_3:58654132-58654151 Msa1298000:intron 45.0%
! GTGGGTTATAAACTGCTCTC+TGG - chr8_3:58654430-58654449 Msa1298000:intron 45.0%
AGAAACTGCCATTCCACTTG+AGG + chr8_3:58654756-58654775 None:intergenic 45.0%
TGTGCGATAGAGAAAGACCA+TGG + chr8_3:58654943-58654962 None:intergenic 45.0%
! GGCTACGTTCCAAGAGTTTT+TGG - chr8_3:58655268-58655287 Msa1298000:CDS 45.0%
AACTTCACAAGCCATGAAGC+TGG - chr8_3:58655296-58655315 Msa1298000:CDS 45.0%
!!! GAAAGGCATTTTCCCAGCTA+AGG - chr8_3:58651772-58651791 Msa1298000:three_prime_UTR 45.0%
! TGGTTCTGCCTCCAACAAAT+CGG - chr8_3:58651903-58651922 Msa1298000:three_prime_UTR 45.0%
! CTTTCGATCCTCCGATTTGT+TGG + chr8_3:58651917-58651936 None:intergenic 45.0%
! AAGGGGATCCTTGATGGTAT+TGG + chr8_3:58652031-58652050 None:intergenic 45.0%
TTGAAGAAGGGGATCCTTGA+TGG + chr8_3:58652037-58652056 None:intergenic 45.0%
TTGGAGGATCGTTGAAGAAG+GGG + chr8_3:58652048-58652067 None:intergenic 45.0%
TGAGACCTAGCTTGATAGAC+TGG - chr8_3:58652348-58652367 Msa1298000:intron 45.0%
ATAGACTGGATATCCTCACC+CGG - chr8_3:58652362-58652381 Msa1298000:intron 45.0%
! AAAGTGTGAGTCTGCCACTT+CGG - chr8_3:58652399-58652418 Msa1298000:intron 45.0%
TTGTGCAAACGGAAGCTTAG+AGG - chr8_3:58652503-58652522 Msa1298000:intron 45.0%
AGAGGTAAATTAGGGAGGAG+GGG - chr8_3:58652521-58652540 Msa1298000:intron 45.0%
!!! GGTTAGGTTGGCTTTTGGTT+TGG - chr8_3:58652546-58652565 Msa1298000:intron 45.0%
GGTAATCACTGAACACCAAC+TGG - chr8_3:58652624-58652643 Msa1298000:intron 45.0%
AATCACTGAACACCAACTGG+TGG - chr8_3:58652627-58652646 Msa1298000:intron 45.0%
TAAGAACCATTTCCGCAAGG+TGG + chr8_3:58652665-58652684 None:intergenic 45.0%
ACCTTGCGGAAATGGTTCTT+AGG - chr8_3:58652664-58652683 Msa1298000:intron 45.0%
CCTTGCGGAAATGGTTCTTA+GGG - chr8_3:58652665-58652684 Msa1298000:intron 45.0%
!! TGGTTCTTAGGGAAGCATTC+TGG - chr8_3:58652676-58652695 Msa1298000:intron 45.0%
GACATTACTGCTCCTACTAC+AGG - chr8_3:58652698-58652717 Msa1298000:intron 45.0%
TTACTGCTCCTACTACAGGT+AGG - chr8_3:58652702-58652721 Msa1298000:intron 45.0%
CTCCTACTACAGGTAGGATA+TGG - chr8_3:58652708-58652727 Msa1298000:intron 45.0%
TCTTTGTCTCGTTCAGCTGA+TGG - chr8_3:58652811-58652830 Msa1298000:intron 45.0%
CTTTGTCTCGTTCAGCTGAT+GGG - chr8_3:58652812-58652831 Msa1298000:intron 45.0%
! GCTGATGGGTAATCTGTTTC+TGG - chr8_3:58652826-58652845 Msa1298000:intron 45.0%
!! TCTGTTTCTGGTGCTTTCCT+TGG - chr8_3:58652838-58652857 Msa1298000:intron 45.0%
!! CTGTTTCTGGTGCTTTCCTT+GGG - chr8_3:58652839-58652858 Msa1298000:intron 45.0%
! CTTTCCTTGGGTTTGGAGTT+GGG - chr8_3:58652851-58652870 Msa1298000:intron 45.0%
! TTTCCTTGGGTTTGGAGTTG+GGG - chr8_3:58652852-58652871 Msa1298000:intron 45.0%
AGGACACATCTTGGATCTCA+TGG - chr8_3:58653404-58653423 Msa1298000:CDS 45.0%
! TCATGGTTCTGCAATCTCAG+AGG - chr8_3:58653421-58653440 Msa1298000:CDS 45.0%
AAGCAAAGGAATGGCTGCTA+TGG - chr8_3:58653883-58653902 Msa1298000:CDS 45.0%
GTCCAGAGCAGTAAACTCTT+GGG + chr8_3:58654029-58654048 None:intergenic 45.0%
TGTCCAGAGCAGTAAACTCT+TGG + chr8_3:58654030-58654049 None:intergenic 45.0%
TATCCTCGGTCCAAGTATCA+AGG - chr8_3:58654132-58654151 Msa1298000:intron 45.0%
! GTGGGTTATAAACTGCTCTC+TGG - chr8_3:58654430-58654449 Msa1298000:intron 45.0%
AGAAACTGCCATTCCACTTG+AGG + chr8_3:58654756-58654775 None:intergenic 45.0%
TGTGCGATAGAGAAAGACCA+TGG + chr8_3:58654943-58654962 None:intergenic 45.0%
! GGCTACGTTCCAAGAGTTTT+TGG - chr8_3:58655268-58655287 Msa1298000:CDS 45.0%
AACTTCACAAGCCATGAAGC+TGG - chr8_3:58655296-58655315 Msa1298000:CDS 45.0%
TTCTGCCTCCAACAAATCGG+AGG - chr8_3:58651906-58651925 Msa1298000:three_prime_UTR 50.0%
!! TCGATCCTCCGATTTGTTGG+AGG + chr8_3:58651914-58651933 None:intergenic 50.0%
TTGATGGGACGCGAAGTTGA+AGG + chr8_3:58651982-58652001 None:intergenic 50.0%
TCAACTTCGCGTCCCATCAA+TGG - chr8_3:58651982-58652001 Msa1298000:exon 50.0%
TAGACTGGATATCCTCACCC+GGG - chr8_3:58652363-58652382 Msa1298000:intron 50.0%
ACTTTACAACTTCGAGGCCC+CGG + chr8_3:58652384-58652403 None:intergenic 50.0%
GTAAATTAGGGAGGAGGGGT+GGG - chr8_3:58652525-58652544 Msa1298000:intron 50.0%
TTGTTGTGTGATCGATCGGG+AGG - chr8_3:58652573-58652592 Msa1298000:intron 50.0%
TCAAGACCACCTTGCGGAAA+TGG - chr8_3:58652656-58652675 Msa1298000:intron 50.0%
CCCTAAGAACCATTTCCGCA+AGG + chr8_3:58652668-58652687 None:intergenic 50.0%
ATATGGAACCTACGCTCAGC+TGG - chr8_3:58652725-58652744 Msa1298000:intron 50.0%
ACGTCCACACAAGCCTCTAT+CGG + chr8_3:58652753-58652772 None:intergenic 50.0%
AGGCTTGTGTGGACGTTCTT+TGG - chr8_3:58652757-58652776 Msa1298000:intron 50.0%
GGCTTGTGTGGACGTTCTTT+GGG - chr8_3:58652758-58652777 Msa1298000:intron 50.0%
GCTTGTGTGGACGTTCTTTG+GGG - chr8_3:58652759-58652778 Msa1298000:intron 50.0%
CTTGTGTGGACGTTCTTTGG+GGG - chr8_3:58652760-58652779 Msa1298000:intron 50.0%
! GACGTTCTTTGGGGGATGTA+TGG - chr8_3:58652768-58652787 Msa1298000:intron 50.0%
TTTGGGGGATGTATGGCCTT+GGG - chr8_3:58652775-58652794 Msa1298000:intron 50.0%
TCTGGTGCTTTCCTTGGGTT+TGG - chr8_3:58652844-58652863 Msa1298000:intron 50.0%
! GCTTTCCTTGGGTTTGGAGT+TGG - chr8_3:58652850-58652869 Msa1298000:intron 50.0%
! TTCCTTGGGTTTGGAGTTGG+GGG - chr8_3:58652853-58652872 Msa1298000:intron 50.0%
GAGTTTAGAGGGGAATCCCA+GGG + chr8_3:58652970-58652989 None:intergenic 50.0%
AGAGTTTAGAGGGGAATCCC+AGG + chr8_3:58652971-58652990 None:intergenic 50.0%
!! CATTTATGCGTTGGCTGCAG+AGG - chr8_3:58653333-58653352 Msa1298000:intron 50.0%
AGTGAAGAGTCGGATGTGAG+TGG - chr8_3:58653370-58653389 Msa1298000:intron 50.0%
!! TCGGATGTGAGTGGTTCTGA+TGG - chr8_3:58653379-58653398 Msa1298000:intron 50.0%
!! TGTGAGTGGTTCTGATGGAG+AGG - chr8_3:58653384-58653403 Msa1298000:intron 50.0%
CTGATGGAGAGGACACATCT+TGG - chr8_3:58653395-58653414 Msa1298000:CDS 50.0%
CTTGGCTGCTCAATCCACAA+AGG + chr8_3:58653498-58653517 None:intergenic 50.0%
GAAGGAAAGCTCACCATGAG+AGG + chr8_3:58653566-58653585 None:intergenic 50.0%
TCGGCAGCAGAGATGCTTTA+TGG - chr8_3:58653833-58653852 Msa1298000:CDS 50.0%
TGCCCAAGAGTTTACTGCTC+TGG - chr8_3:58654024-58654043 Msa1298000:intron 50.0%
GACTGACCAACTGGAAGACA+GGG + chr8_3:58654054-58654073 None:intergenic 50.0%
CTGTCTTCCAGTTGGTCAGT+CGG - chr8_3:58654053-58654072 Msa1298000:intron 50.0%
TTGGTCAGTCGGACATTCCT+AGG - chr8_3:58654064-58654083 Msa1298000:intron 50.0%
TGCATATGCATTATGGGGGC+AGG - chr8_3:58654599-58654618 Msa1298000:intron 50.0%
GCATATGCATTATGGGGGCA+GGG - chr8_3:58654600-58654619 Msa1298000:intron 50.0%
GTACTCCTTGCAGCATTCAG+CGG - chr8_3:58655379-58655398 Msa1298000:CDS 50.0%
TTGATCCGCTGAATGCTGCA+AGG + chr8_3:58655387-58655406 None:intergenic 50.0%
TTCTGCCTCCAACAAATCGG+AGG - chr8_3:58651906-58651925 Msa1298000:three_prime_UTR 50.0%
!! TCGATCCTCCGATTTGTTGG+AGG + chr8_3:58651914-58651933 None:intergenic 50.0%
TTGATGGGACGCGAAGTTGA+AGG + chr8_3:58651982-58652001 None:intergenic 50.0%
TCAACTTCGCGTCCCATCAA+TGG - chr8_3:58651982-58652001 Msa1298000:exon 50.0%
TAGACTGGATATCCTCACCC+GGG - chr8_3:58652363-58652382 Msa1298000:intron 50.0%
ACTTTACAACTTCGAGGCCC+CGG + chr8_3:58652384-58652403 None:intergenic 50.0%
GTAAATTAGGGAGGAGGGGT+GGG - chr8_3:58652525-58652544 Msa1298000:intron 50.0%
TTGTTGTGTGATCGATCGGG+AGG - chr8_3:58652573-58652592 Msa1298000:intron 50.0%
TCAAGACCACCTTGCGGAAA+TGG - chr8_3:58652656-58652675 Msa1298000:intron 50.0%
CCCTAAGAACCATTTCCGCA+AGG + chr8_3:58652668-58652687 None:intergenic 50.0%
ATATGGAACCTACGCTCAGC+TGG - chr8_3:58652725-58652744 Msa1298000:intron 50.0%
ACGTCCACACAAGCCTCTAT+CGG + chr8_3:58652753-58652772 None:intergenic 50.0%
AGGCTTGTGTGGACGTTCTT+TGG - chr8_3:58652757-58652776 Msa1298000:intron 50.0%
GGCTTGTGTGGACGTTCTTT+GGG - chr8_3:58652758-58652777 Msa1298000:intron 50.0%
GCTTGTGTGGACGTTCTTTG+GGG - chr8_3:58652759-58652778 Msa1298000:intron 50.0%
CTTGTGTGGACGTTCTTTGG+GGG - chr8_3:58652760-58652779 Msa1298000:intron 50.0%
! GACGTTCTTTGGGGGATGTA+TGG - chr8_3:58652768-58652787 Msa1298000:intron 50.0%
TTTGGGGGATGTATGGCCTT+GGG - chr8_3:58652775-58652794 Msa1298000:intron 50.0%
TCTGGTGCTTTCCTTGGGTT+TGG - chr8_3:58652844-58652863 Msa1298000:intron 50.0%
! GCTTTCCTTGGGTTTGGAGT+TGG - chr8_3:58652850-58652869 Msa1298000:intron 50.0%
! TTCCTTGGGTTTGGAGTTGG+GGG - chr8_3:58652853-58652872 Msa1298000:intron 50.0%
GAGTTTAGAGGGGAATCCCA+GGG + chr8_3:58652970-58652989 None:intergenic 50.0%
AGAGTTTAGAGGGGAATCCC+AGG + chr8_3:58652971-58652990 None:intergenic 50.0%
!! CATTTATGCGTTGGCTGCAG+AGG - chr8_3:58653333-58653352 Msa1298000:intron 50.0%
AGTGAAGAGTCGGATGTGAG+TGG - chr8_3:58653370-58653389 Msa1298000:intron 50.0%
!! TCGGATGTGAGTGGTTCTGA+TGG - chr8_3:58653379-58653398 Msa1298000:intron 50.0%
!! TGTGAGTGGTTCTGATGGAG+AGG - chr8_3:58653384-58653403 Msa1298000:intron 50.0%
CTGATGGAGAGGACACATCT+TGG - chr8_3:58653395-58653414 Msa1298000:CDS 50.0%
CTTGGCTGCTCAATCCACAA+AGG + chr8_3:58653498-58653517 None:intergenic 50.0%
GAAGGAAAGCTCACCATGAG+AGG + chr8_3:58653566-58653585 None:intergenic 50.0%
TCGGCAGCAGAGATGCTTTA+TGG - chr8_3:58653833-58653852 Msa1298000:CDS 50.0%
TGCCCAAGAGTTTACTGCTC+TGG - chr8_3:58654024-58654043 Msa1298000:intron 50.0%
GACTGACCAACTGGAAGACA+GGG + chr8_3:58654054-58654073 None:intergenic 50.0%
CTGTCTTCCAGTTGGTCAGT+CGG - chr8_3:58654053-58654072 Msa1298000:intron 50.0%
TTGGTCAGTCGGACATTCCT+AGG - chr8_3:58654064-58654083 Msa1298000:intron 50.0%
TGCATATGCATTATGGGGGC+AGG - chr8_3:58654599-58654618 Msa1298000:intron 50.0%
GCATATGCATTATGGGGGCA+GGG - chr8_3:58654600-58654619 Msa1298000:intron 50.0%
GTACTCCTTGCAGCATTCAG+CGG - chr8_3:58655379-58655398 Msa1298000:CDS 50.0%
TTGATCCGCTGAATGCTGCA+AGG + chr8_3:58655387-58655406 None:intergenic 50.0%
AGACTGGATATCCTCACCCG+GGG - chr8_3:58652364-58652383 Msa1298000:intron 55.0%
CTTTACAACTTCGAGGCCCC+GGG + chr8_3:58652383-58652402 None:intergenic 55.0%
GGTAAATTAGGGAGGAGGGG+TGG - chr8_3:58652524-58652543 Msa1298000:intron 55.0%
!!! GGGTGGGTTAGGTTGGCTTT+TGG - chr8_3:58652541-58652560 Msa1298000:intron 55.0%
TGTGATCGATCGGGAGGTCT+TGG - chr8_3:58652579-58652598 Msa1298000:intron 55.0%
! CTTTGGGGGATGTATGGCCT+TGG - chr8_3:58652774-58652793 Msa1298000:intron 55.0%
! TTGGGGGATGTATGGCCTTG+GGG - chr8_3:58652776-58652795 Msa1298000:intron 55.0%
! TATGGCCTTGGGGGCTGATT+GGG - chr8_3:58652786-58652805 Msa1298000:intron 55.0%
AACCCCCAACTCCAAACCCA+AGG + chr8_3:58652858-58652877 None:intergenic 55.0%
! TGGGTTTGGAGTTGGGGGTT+TGG - chr8_3:58652858-58652877 Msa1298000:intron 55.0%
GGACAACCCTGTCTTCCAGT+TGG - chr8_3:58654045-58654064 Msa1298000:intron 55.0%
CGACTGACCAACTGGAAGAC+AGG + chr8_3:58654055-58654074 None:intergenic 55.0%
GGAATGTCCGACTGACCAAC+TGG + chr8_3:58654063-58654082 None:intergenic 55.0%
CTGCCTTGATACTTGGACCG+AGG + chr8_3:58654138-58654157 None:intergenic 55.0%
AAGCCGCAGAAACCAGCTCA+GGG - chr8_3:58655247-58655266 Msa1298000:CDS 55.0%
! TAGCCCTGAGCTGGTTTCTG+CGG + chr8_3:58655253-58655272 None:intergenic 55.0%
AGACTGGATATCCTCACCCG+GGG - chr8_3:58652364-58652383 Msa1298000:intron 55.0%
CTTTACAACTTCGAGGCCCC+GGG + chr8_3:58652383-58652402 None:intergenic 55.0%
GGTAAATTAGGGAGGAGGGG+TGG - chr8_3:58652524-58652543 Msa1298000:intron 55.0%
!!! GGGTGGGTTAGGTTGGCTTT+TGG - chr8_3:58652541-58652560 Msa1298000:intron 55.0%
TGTGATCGATCGGGAGGTCT+TGG - chr8_3:58652579-58652598 Msa1298000:intron 55.0%
! CTTTGGGGGATGTATGGCCT+TGG - chr8_3:58652774-58652793 Msa1298000:intron 55.0%
! TTGGGGGATGTATGGCCTTG+GGG - chr8_3:58652776-58652795 Msa1298000:intron 55.0%
! TATGGCCTTGGGGGCTGATT+GGG - chr8_3:58652786-58652805 Msa1298000:intron 55.0%
AACCCCCAACTCCAAACCCA+AGG + chr8_3:58652858-58652877 None:intergenic 55.0%
! TGGGTTTGGAGTTGGGGGTT+TGG - chr8_3:58652858-58652877 Msa1298000:intron 55.0%
GGACAACCCTGTCTTCCAGT+TGG - chr8_3:58654045-58654064 Msa1298000:intron 55.0%
CGACTGACCAACTGGAAGAC+AGG + chr8_3:58654055-58654074 None:intergenic 55.0%
GGAATGTCCGACTGACCAAC+TGG + chr8_3:58654063-58654082 None:intergenic 55.0%
CTGCCTTGATACTTGGACCG+AGG + chr8_3:58654138-58654157 None:intergenic 55.0%
AAGCCGCAGAAACCAGCTCA+GGG - chr8_3:58655247-58655266 Msa1298000:CDS 55.0%
! TAGCCCTGAGCTGGTTTCTG+CGG + chr8_3:58655253-58655272 None:intergenic 55.0%
! TTAGGGAGGAGGGGTGGGTT+AGG - chr8_3:58652530-58652549 Msa1298000:intron 60.0%
!! TATCGGTGCCAGCTGAGCGT+AGG + chr8_3:58652736-58652755 None:intergenic 60.0%
!! GGCACCGATAGAGGCTTGTG+TGG - chr8_3:58652746-58652765 Msa1298000:intron 60.0%
! TGGGGGATGTATGGCCTTGG+GGG - chr8_3:58652777-58652796 Msa1298000:intron 60.0%
! GTATGGCCTTGGGGGCTGAT+TGG - chr8_3:58652785-58652804 Msa1298000:intron 60.0%
AGACACCCAATCAGCCCCCA+AGG + chr8_3:58652794-58652813 None:intergenic 60.0%
! GGGGGTTTGGCAGCTTGTTC+TGG - chr8_3:58652871-58652890 Msa1298000:intron 60.0%
GAAGCCGCAGAAACCAGCTC+AGG - chr8_3:58655246-58655265 Msa1298000:CDS 60.0%
CTTGGAACGTAGCCCTGAGC+TGG + chr8_3:58655262-58655281 None:intergenic 60.0%
! TTAGGGAGGAGGGGTGGGTT+AGG - chr8_3:58652530-58652549 Msa1298000:intron 60.0%
!! TATCGGTGCCAGCTGAGCGT+AGG + chr8_3:58652736-58652755 None:intergenic 60.0%
!! GGCACCGATAGAGGCTTGTG+TGG - chr8_3:58652746-58652765 Msa1298000:intron 60.0%
! TGGGGGATGTATGGCCTTGG+GGG - chr8_3:58652777-58652796 Msa1298000:intron 60.0%
! GTATGGCCTTGGGGGCTGAT+TGG - chr8_3:58652785-58652804 Msa1298000:intron 60.0%
AGACACCCAATCAGCCCCCA+AGG + chr8_3:58652794-58652813 None:intergenic 60.0%
! GGGGGTTTGGCAGCTTGTTC+TGG - chr8_3:58652871-58652890 Msa1298000:intron 60.0%
GAAGCCGCAGAAACCAGCTC+AGG - chr8_3:58655246-58655265 Msa1298000:CDS 60.0%
CTTGGAACGTAGCCCTGAGC+TGG + chr8_3:58655262-58655281 None:intergenic 60.0%
!! GGAGGAGGGGTGGGTTAGGT+TGG - chr8_3:58652534-58652553 Msa1298000:intron 65.0%
!! CGCTCAGCTGGCACCGATAG+AGG - chr8_3:58652737-58652756 Msa1298000:intron 65.0%
GGGGGCAGGGCTGATGATCT+AGG - chr8_3:58654613-58654632 Msa1298000:intron 65.0%
!! GGAGGAGGGGTGGGTTAGGT+TGG - chr8_3:58652534-58652553 Msa1298000:intron 65.0%
!! CGCTCAGCTGGCACCGATAG+AGG - chr8_3:58652737-58652756 Msa1298000:intron 65.0%
GGGGGCAGGGCTGATGATCT+AGG - chr8_3:58654613-58654632 Msa1298000:intron 65.0%
CAACTTCGAGGCCCCGGGTG+AGG + chr8_3:58652378-58652397 None:intergenic 70.0%
CAACTTCGAGGCCCCGGGTG+AGG + chr8_3:58652378-58652397 None:intergenic 70.0%
Chromosome Type Strat End Strand Name
chr8_3 gene 58651593 58655705 58651593 ID=Msa1298000;Name=Msa1298000
chr8_3 mRNA 58651593 58655705 58651593 ID=Msa1298000-mRNA-1;Parent=Msa1298000;Name=Msa1298000-mRNA-1;_AED=0.06;_eAED=0.06;_QI=293|1|1|1|1|1|5|393|274
chr8_3 exon 58651593 58652116 58651593 ID=Msa1298000-mRNA-1:exon:16840;Parent=Msa1298000-mRNA-1
chr8_3 exon 58653142 58653307 58653142 ID=Msa1298000-mRNA-1:exon:16839;Parent=Msa1298000-mRNA-1
chr8_3 exon 58653394 58653503 58653394 ID=Msa1298000-mRNA-1:exon:16838;Parent=Msa1298000-mRNA-1
chr8_3 exon 58653727 58653945 58653727 ID=Msa1298000-mRNA-1:exon:16837;Parent=Msa1298000-mRNA-1
chr8_3 exon 58655214 58655705 58655214 ID=Msa1298000-mRNA-1:exon:16836;Parent=Msa1298000-mRNA-1
chr8_3 five_prime_UTR 58655413 58655705 58655413 ID=Msa1298000-mRNA-1:five_prime_utr;Parent=Msa1298000-mRNA-1
chr8_3 CDS 58655214 58655412 58655214 ID=Msa1298000-mRNA-1:cds;Parent=Msa1298000-mRNA-1
chr8_3 CDS 58653727 58653945 58653727 ID=Msa1298000-mRNA-1:cds;Parent=Msa1298000-mRNA-1
chr8_3 CDS 58653394 58653503 58653394 ID=Msa1298000-mRNA-1:cds;Parent=Msa1298000-mRNA-1
chr8_3 CDS 58653142 58653307 58653142 ID=Msa1298000-mRNA-1:cds;Parent=Msa1298000-mRNA-1
chr8_3 CDS 58651986 58652116 58651986 ID=Msa1298000-mRNA-1:cds;Parent=Msa1298000-mRNA-1
chr8_3 three_prime_UTR 58651593 58651985 58651593 ID=Msa1298000-mRNA-1:three_prime_utr;Parent=Msa1298000-mRNA-1
Gene Sequence

>Msa1298000

ATGTACAAAGGTCGTGGTGGTTCTGCCTCCAACAAATCGGAGGATCGAAAGCGAATCAACGATGTTCTCGATAAGCAGCTTGAACGATCTTCTCCTTCAACTTCGCGTCCCATCAATGGCAAAACCAACAAAGAGAGAGAAACCAATACCATCAAGGATCCCCTTCTTCAACGATCCTCCAAAACTGCCAATATTTCTGAGGAGTCTGAAACAGACAGTGAAGAGTCGGATGTGAGTGGTTCTGATGGAGAGGACACATCTTGGATCTCATGGTTCTGCAATCTCAGAGGAAATGAGTTCTTTTGTGAGGTTGATGATGATTACATCCAAGATGACTTCAACCTTTGTGGATTGAGCAGCCAAGTGCCTTACTATGATTATGCTCTTGATTTGATTTTGGATGTTGAATCCTCTCATGGTGATATGTTCACAGAGGAACAAAACGAGTTAATTGAATCGGCAGCAGAGATGCTTTATGGTATGATTCATGCGCGTTACATATTGACAAGCAAAGGAATGGCTGCTATGCTTGACAAGTACAAGAACTATGACTTTGGTAGATGCCCAAGAGTTTACTGCTCTGGACAACCCTGTCTTCCAGTTGGTCAGTCGGACATTCCTAGGTCAAGTACTGTGAAAATATATTGCCCTAGGTGTGAAGATCTTTATTATCCTCGGTCCAAGTATCAAGGCAACATTGATGGAGCTTATTTTGGAACAACATTTCCACACCTCTTCTTGATGACATATGGACAACTGAAGCCGCAGAAACCAGCTCAGGGCTACGTTCCAAGAGTTTTTGGGTTCAAACTTCACAAGCCATGA
Protein sequence

>Msa1298000

MYKGRGGSASNKSEDRKRINDVLDKQLERSSPSTSRPINGKTNKERETNTIKDPLLQRSSKTANISEESETDSEESDVSGSDGEDTSWISWFCNLRGNEFFCEVDDDYIQDDFNLCGLSSQVPYYDYALDLILDVESSHGDMFTEEQNELIESAAEMLYGMIHARYILTSKGMAAMLDKYKNYDFGRCPRVYCSGQPCLPVGQSDIPRSSTVKIYCPRCEDLYYPRSKYQGNIDGAYFGTTFPHLFLMTYGQLKPQKPAQGYVPRVFGFKLHKP*