AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa1206260

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa1206260 MtrunA17_Chr4g0055361 97.445 274 1 2 1 274 1 268 0.0 548
Msa1206260 MtrunA17_Chr5g0399951 81.560 282 43 3 1 274 1 281 6.51e-168 466
Msa1206260 MtrunA17_Chr1g0153861 98.630 73 1 0 67 139 48 120 7.91e-46 150
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa1206260 AT5G47080.1 75.601 291 50 4 1 274 1 287 4.02e-157 439
Msa1206260 AT4G17640.1 75.874 286 53 5 1 274 1 282 1.49e-156 437
Msa1206260 AT2G44680.1 78.378 259 50 2 15 272 27 280 6.83e-154 431
Msa1206260 AT5G47080.4 74.227 291 49 5 1 274 1 282 3.43e-151 424
Msa1206260 AT4G17640.2 74.476 286 52 6 1 274 1 277 1.23e-150 422
Msa1206260 AT2G44680.2 77.606 259 51 3 15 272 27 279 1.92e-150 422
Msa1206260 AT3G60250.1 74.809 262 55 2 15 274 24 276 1.20e-143 404
Msa1206260 AT3G60250.2 74.046 262 56 3 15 274 24 275 3.74e-140 395
Msa1206260 AT5G47080.2 73.600 250 45 4 1 233 1 246 9.05e-127 361
Msa1206260 AT5G47080.3 73.684 247 47 4 1 233 1 243 4.49e-126 359
Msa1206260 AT2G44680.3 77.273 220 44 2 15 233 27 241 1.01e-123 353
Msa1206260 AT3G60250.3 72.398 221 50 2 15 233 24 235 1.57e-111 322

Find 90 sgRNAs with CRISPR-Local

Find 620 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
TCTTATTATTGGTCAAAATT+AGG 0.097350 8_1:-63221223 Msa1206260:five_prime_UTR
GACATTGATGGAGCTTATTT+TGG 0.142336 8_1:-63217880 Msa1206260:CDS
TTGTTTATTGTAGGTAAAAT+TGG 0.166521 8_1:-63221382 Msa1206260:five_prime_UTR
TTTAGGATTATTCTTATTAT+TGG 0.182218 8_1:-63221234 Msa1206260:five_prime_UTR
TTATGCTCTTGATTTGATTT+TGG 0.200069 8_1:-63219529 Msa1206260:CDS
TCCAAAACTGCCAATATTTC+TGG 0.210478 8_1:-63220999 Msa1206260:intron
CTTATTATTGGTCAAAATTA+GGG 0.221847 8_1:-63221222 Msa1206260:five_prime_UTR
ACCAGAAATATTGGCAGTTT+TGG 0.225014 8_1:+63220998 None:intergenic
GTCTTGTTACAAATTGTATT+TGG 0.226587 8_1:-63217497 Msa1206260:three_prime_UTR
CAAGATGACTTCAACCTTTG+TGG 0.289031 8_1:-63219579 Msa1206260:CDS
TCGGCAGCAGAGATGCTTTA+TGG 0.294830 8_1:-63219228 Msa1206260:CDS
CTTTCGATCCTCCGATTTGT+TGG 0.309378 8_1:+63221148 None:intergenic
TTTGAGACACAAAGTGTGTT+AGG 0.310519 8_1:+63221337 None:intergenic
AGCTTAAACTTCCAGCTTCA+TGG 0.333527 8_1:+63217754 None:intergenic
ATTGGTTTCTCTCTCTTTGT+TGG 0.347659 8_1:+63221052 None:intergenic
GAAATGGGTACCAGAAATAT+TGG 0.362437 8_1:+63220989 None:intergenic
AAGGGGATCCTTGATGGTAT+TGG 0.386002 8_1:+63221034 None:intergenic
TTAAAACGGAAATGAGATAA+TGG 0.387282 8_1:+63217412 None:intergenic
TAAGCTTTCATGAAAGTAAG+AGG 0.390464 8_1:-63217737 Msa1206260:three_prime_UTR
ATATATCCTTCTACCTTAGC+TGG 0.393064 8_1:+63221277 None:intergenic
TCAACTTAAGCAAAGGTAGT+AGG 0.401566 8_1:+63221454 None:intergenic
TGTTTATTGTAGGTAAAATT+GGG 0.403706 8_1:-63221381 Msa1206260:five_prime_UTR
CACCTCTTCTTGATGACATA+TGG 0.412631 8_1:-63217844 Msa1206260:CDS
CACAAAGGTTGAAGTCATCT+TGG 0.419737 8_1:+63219580 None:intergenic
AAGGATACTGCCTTGATACT+TGG 0.428282 8_1:+63218919 None:intergenic
TGACTCTGTCTAGACATTGA+TGG 0.431052 8_1:-63217892 Msa1206260:intron
TTGAAGAAGGGGATCCTTGA+TGG 0.447132 8_1:+63221028 None:intergenic
TCCACAAATTCAACTTAAAA+CGG 0.452059 8_1:+63217398 None:intergenic
TGCCCAAGAGTTTACTGCTC+TGG 0.452889 8_1:-63219037 Msa1206260:CDS
CGACTGACCAACTGGAAGAC+AGG 0.459035 8_1:+63219009 None:intergenic
GGAATGTCCGACTGACCAAC+TGG 0.459318 8_1:+63219001 None:intergenic
TGTCCAGAGCAGTAAACTCT+TGG 0.459857 8_1:+63219034 None:intergenic
TTGGTCAGTCGGACATTCCT+AGG 0.467923 8_1:-63218997 Msa1206260:CDS
CGCTCCTAAAACAAGTAAAA+CGG 0.469487 8_1:+63217624 None:intergenic
AACTTCACAAGCCATGAAGC+TGG 0.476442 8_1:-63217765 Msa1206260:exon
CTCATTTAACTCTTCTGTTG+TGG 0.480534 8_1:-63217704 Msa1206260:three_prime_UTR
TTGAGACACAAAGTGTGTTA+GGG 0.480729 8_1:+63221338 None:intergenic
TCAAGAGCATAATCATAGTA+AGG 0.480913 8_1:+63219540 None:intergenic
TTAGCTGGGAAAATGCCTTT+CGG 0.485073 8_1:+63221292 None:intergenic
ACAAAACGAGTTAATTGAAT+CGG 0.485282 8_1:-63219247 Msa1206260:CDS
TCAACTTCGCGTCCCATCAA+TGG 0.485312 8_1:-63221080 Msa1206260:CDS
AAGCAAAGGAATGGCTGCTA+TGG 0.494974 8_1:-63219178 Msa1206260:intron
GAAGCCGCAGAAACCAGCTC+AGG 0.495797 8_1:-63217815 Msa1206260:CDS
CTGATGGAGAGGACACATCT+TGG 0.496739 8_1:-63219665 Msa1206260:CDS
GTGAAGATCTTTATTATCCT+CGG 0.499504 8_1:-63218943 Msa1206260:CDS
CAGAAGAGTTAAATGAGATT+CGG 0.501653 8_1:+63217710 None:intergenic
CTTGGAACGTAGCCCTGAGC+TGG 0.505575 8_1:+63217802 None:intergenic
AAGTACAAGAACTATGACTT+TGG 0.513375 8_1:-63219064 Msa1206260:CDS
AATTCAATGAGCAAGTGCTT+AGG 0.513437 8_1:-63217541 Msa1206260:three_prime_UTR
TGGTTCTGCCTCCAACAAAT+CGG 0.517982 8_1:-63221159 Msa1206260:CDS
AGGACACATCTTGGATCTCA+TGG 0.519032 8_1:-63219656 Msa1206260:CDS
GTCTCAAATCTACAACCAAA+AGG 0.520752 8_1:-63221322 Msa1206260:five_prime_UTR
TCGATCCTCCGATTTGTTGG+AGG 0.523491 8_1:+63221151 None:intergenic
GTCCAGAGCAGTAAACTCTT+GGG 0.524198 8_1:+63219035 None:intergenic
TTGGATGTTGAATCCTCTCA+TGG 0.536194 8_1:-63219510 Msa1206260:intron
TATCCTCGGTCCAAGTATCA+AGG 0.539508 8_1:-63218929 Msa1206260:CDS
CTAATTCTCAACTTAAGCAA+AGG 0.539634 8_1:+63221447 None:intergenic
TTGGAGGATCGTTGAAGAAG+GGG 0.542487 8_1:+63221017 None:intergenic
TTTGGAGGATCGTTGAAGAA+GGG 0.542634 8_1:+63221016 None:intergenic
TCGGATGTGAGTGGTTCTGA+TGG 0.547426 8_1:-63219681 Msa1206260:CDS
TTGATGGGACGCGAAGTTGA+AGG 0.555193 8_1:+63221083 None:intergenic
CATATTGACAAGCAAAGGAA+TGG 0.559392 8_1:-63219187 Msa1206260:CDS
TAATAAAGATCTTCACACCT+AGG 0.564469 8_1:+63218950 None:intergenic
CTGTGAAAATATATTGCCCT+AGG 0.570529 8_1:-63218967 Msa1206260:CDS
GGACAACCCTGTCTTCCAGT+TGG 0.581204 8_1:-63219016 Msa1206260:CDS
TATATCCTTCTACCTTAGCT+GGG 0.584299 8_1:+63221278 None:intergenic
GAGAGAAACCAATACCATCA+AGG 0.584389 8_1:-63221042 Msa1206260:CDS
CATAATCATAGTAAGGCACT+TGG 0.585754 8_1:+63219547 None:intergenic
GTCCATATGTCATCAAGAAG+AGG 0.586772 8_1:+63217842 None:intergenic
TTGAAGCTGAAAGTGAAACT+AGG 0.589169 8_1:+63217563 None:intergenic
GAAGGAAAGCTCACCATGAG+AGG 0.595315 8_1:+63219497 None:intergenic
CTGTCTTCCAGTTGGTCAGT+CGG 0.596296 8_1:-63219008 Msa1206260:CDS
CGTTACATATTGACAAGCAA+AGG 0.597579 8_1:-63219192 Msa1206260:CDS
AATAAAGATCTTCACACCTA+GGG 0.602100 8_1:+63218951 None:intergenic
TATGTCATCAAGAAGAGGTG+TGG 0.608315 8_1:+63217847 None:intergenic
TGAAACAGACAGTGAAGAGT+CGG 0.609801 8_1:-63219700 Msa1206260:CDS
TTGATCCGCTGAATGCTGCA+AGG 0.612618 8_1:+63217677 None:intergenic
GTACTCCTTGCAGCATTCAG+CGG 0.625181 8_1:-63217682 Msa1206260:three_prime_UTR
TAGCCCTGAGCTGGTTTCTG+CGG 0.627243 8_1:+63217811 None:intergenic
AAGCCGCAGAAACCAGCTCA+GGG 0.638099 8_1:-63217814 Msa1206260:CDS
GACTGACCAACTGGAAGACA+GGG 0.638452 8_1:+63219010 None:intergenic
CTGCCTTGATACTTGGACCG+AGG 0.643410 8_1:+63218926 None:intergenic
AGTGAAGAGTCGGATGTGAG+TGG 0.651799 8_1:-63219690 Msa1206260:CDS
CCAAAAGGAAAATAGCCGAA+AGG 0.654665 8_1:-63221307 Msa1206260:five_prime_UTR
AAAATGTACAAAGGTCGTGG+TGG 0.670283 8_1:-63221179 Msa1206260:CDS
CTTGGCTGCTCAATCCACAA+AGG 0.670694 8_1:+63219565 None:intergenic
TTCTGCCTCCAACAAATCGG+AGG 0.672720 8_1:-63221156 Msa1206260:CDS
TCATGGTTCTGCAATCTCAG+AGG 0.675059 8_1:-63219639 Msa1206260:CDS
TGTGAGTGGTTCTGATGGAG+AGG 0.687843 8_1:-63219676 Msa1206260:CDS
CATAGGTGATATGTTCACAG+AGG 0.751923 8_1:-63219271 Msa1206260:intron

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!!! TAATTTTGTGATTTTTTTTT+GGG - chr8_1:63217968-63217987 Msa1206260:intron 10.0%
!! TAATTAAGTTTGATTAATTT+AGG - chr8_1:63218067-63218086 Msa1206260:intron 10.0%
!! AGAAAGAAAAAAAAAAAATT+GGG + chr8_1:63218211-63218230 None:intergenic 10.0%
!!! AATTTTTTTTTTTTCTTTCT+GGG - chr8_1:63218211-63218230 Msa1206260:intron 10.0%
!!! ATCATTTTTTTTTTTTTGAA+TGG + chr8_1:63218820-63218839 None:intergenic 10.0%
!! AAAATAAAAAATAACTGAAA+AGG + chr8_1:63219522-63219541 None:intergenic 10.0%
!!! TAATTTTGTGATTTTTTTTT+GGG - chr8_1:63217968-63217987 Msa1206260:intron 10.0%
!! TAATTAAGTTTGATTAATTT+AGG - chr8_1:63218067-63218086 Msa1206260:intron 10.0%
!! AGAAAGAAAAAAAAAAAATT+GGG + chr8_1:63218211-63218230 None:intergenic 10.0%
!!! AATTTTTTTTTTTTCTTTCT+GGG - chr8_1:63218211-63218230 Msa1206260:intron 10.0%
!!! ATCATTTTTTTTTTTTTGAA+TGG + chr8_1:63218820-63218839 None:intergenic 10.0%
!! AAAATAAAAAATAACTGAAA+AGG + chr8_1:63219522-63219541 None:intergenic 10.0%
!!! ATCATGATATAATTGATTTT+AGG - chr8_1:63217596-63217615 Msa1206260:three_prime_UTR 15.0%
!!! TTTAGGATTATTCTTATTAT+TGG - chr8_1:63217613-63217632 Msa1206260:three_prime_UTR 15.0%
!!! GAAATTAAAGATTTTGAATA+CGG + chr8_1:63217909-63217928 None:intergenic 15.0%
!! CAAAAAAAAATCACAAAATT+AGG + chr8_1:63217969-63217988 None:intergenic 15.0%
!!! CTAATTTTGTGATTTTTTTT+TGG - chr8_1:63217967-63217986 Msa1206260:intron 15.0%
!! CAGAAAGAAAAAAAAAAAAT+TGG + chr8_1:63218212-63218231 None:intergenic 15.0%
!!! CAATTTTTTTTTTTTCTTTC+TGG - chr8_1:63218210-63218229 Msa1206260:intron 15.0%
!! ATCTATAAAGAAATAAACAA+AGG + chr8_1:63218786-63218805 None:intergenic 15.0%
!!! AAAATATCCTTTATTTGAAA+GGG + chr8_1:63218961-63218980 None:intergenic 15.0%
!!! AAAAATATCCTTTATTTGAA+AGG + chr8_1:63218962-63218981 None:intergenic 15.0%
!!! TATTGAATTTTATTTTGTCA+TGG - chr8_1:63219964-63219983 Msa1206260:intron 15.0%
!!! TATTTTTTAGTATACCATTA+TGG + chr8_1:63220345-63220364 None:intergenic 15.0%
!!! TTTTGGAATTGTAAATTTTT+TGG - chr8_1:63220617-63220636 Msa1206260:intron 15.0%
!! ATATCATGATTAAAAAACTA+TGG + chr8_1:63220832-63220851 None:intergenic 15.0%
!! ATGATATTTATATTAACACT+GGG - chr8_1:63220845-63220864 Msa1206260:intron 15.0%
!!! ATCATGATATAATTGATTTT+AGG - chr8_1:63217596-63217615 Msa1206260:three_prime_UTR 15.0%
!!! TTTAGGATTATTCTTATTAT+TGG - chr8_1:63217613-63217632 Msa1206260:three_prime_UTR 15.0%
!!! GAAATTAAAGATTTTGAATA+CGG + chr8_1:63217909-63217928 None:intergenic 15.0%
!! CAAAAAAAAATCACAAAATT+AGG + chr8_1:63217969-63217988 None:intergenic 15.0%
!!! CTAATTTTGTGATTTTTTTT+TGG - chr8_1:63217967-63217986 Msa1206260:intron 15.0%
!! CAGAAAGAAAAAAAAAAAAT+TGG + chr8_1:63218212-63218231 None:intergenic 15.0%
!!! CAATTTTTTTTTTTTCTTTC+TGG - chr8_1:63218210-63218229 Msa1206260:intron 15.0%
!! ATCTATAAAGAAATAAACAA+AGG + chr8_1:63218786-63218805 None:intergenic 15.0%
!!! AAAATATCCTTTATTTGAAA+GGG + chr8_1:63218961-63218980 None:intergenic 15.0%
!!! AAAAATATCCTTTATTTGAA+AGG + chr8_1:63218962-63218981 None:intergenic 15.0%
!!! TATTGAATTTTATTTTGTCA+TGG - chr8_1:63219964-63219983 Msa1206260:intron 15.0%
!!! TATTTTTTAGTATACCATTA+TGG + chr8_1:63220345-63220364 None:intergenic 15.0%
!!! TTTTGGAATTGTAAATTTTT+TGG - chr8_1:63220617-63220636 Msa1206260:intron 15.0%
!! ATATCATGATTAAAAAACTA+TGG + chr8_1:63220832-63220851 None:intergenic 15.0%
!! ATGATATTTATATTAACACT+GGG - chr8_1:63220845-63220864 Msa1206260:intron 15.0%
!!! AATTGTGTTTTGTTTATTGT+AGG - chr8_1:63217456-63217475 Msa1206260:three_prime_UTR 20.0%
!! TTGTTTATTGTAGGTAAAAT+TGG - chr8_1:63217465-63217484 Msa1206260:three_prime_UTR 20.0%
!! TGTTTATTGTAGGTAAAATT+GGG - chr8_1:63217466-63217485 Msa1206260:three_prime_UTR 20.0%
!! TCTTATTATTGGTCAAAATT+AGG - chr8_1:63217624-63217643 Msa1206260:three_prime_UTR 20.0%
!! CTTATTATTGGTCAAAATTA+GGG - chr8_1:63217625-63217644 Msa1206260:three_prime_UTR 20.0%
!!! AATAGTTTTGGATAAGAAAT+GGG + chr8_1:63217876-63217895 None:intergenic 20.0%
!! AATTAGGTCATAAAAAAAGA+GGG + chr8_1:63217953-63217972 None:intergenic 20.0%
!! AAATTAGGTCATAAAAAAAG+AGG + chr8_1:63217954-63217973 None:intergenic 20.0%
!! CTATAATGTACTATAAAGTA+TGG - chr8_1:63218239-63218258 Msa1206260:intron 20.0%
!! ACTCTAAACAAAAACATTAA+CGG + chr8_1:63218723-63218742 None:intergenic 20.0%
!! ATAAATCCAACAAAATATGA+AGG + chr8_1:63219371-63219390 None:intergenic 20.0%
!! ACTTAACTTTGATTCTTATT+TGG - chr8_1:63219437-63219456 Msa1206260:intron 20.0%
!! TCAATAATTGATATGTCATA+AGG + chr8_1:63219950-63219969 None:intergenic 20.0%
!! TAAAAATACCTATACCTAAA+AGG + chr8_1:63220130-63220149 None:intergenic 20.0%
!!! ACTACAAACTCAATAAATTT+TGG - chr8_1:63220264-63220283 Msa1206260:intron 20.0%
!! AATTTACAATTCCAAAAAAC+TGG + chr8_1:63220614-63220633 None:intergenic 20.0%
!! CACAATAATGTTAAGAAATT+TGG - chr8_1:63220745-63220764 Msa1206260:intron 20.0%
!! CATGATATTTATATTAACAC+TGG - chr8_1:63220844-63220863 Msa1206260:intron 20.0%
!!! TATATTTTACTGGTTTGAAA+AGG + chr8_1:63221198-63221217 None:intergenic 20.0%
!!! AATTGTGTTTTGTTTATTGT+AGG - chr8_1:63217456-63217475 Msa1206260:three_prime_UTR 20.0%
!! TTGTTTATTGTAGGTAAAAT+TGG - chr8_1:63217465-63217484 Msa1206260:three_prime_UTR 20.0%
!! TGTTTATTGTAGGTAAAATT+GGG - chr8_1:63217466-63217485 Msa1206260:three_prime_UTR 20.0%
!! TCTTATTATTGGTCAAAATT+AGG - chr8_1:63217624-63217643 Msa1206260:three_prime_UTR 20.0%
!! CTTATTATTGGTCAAAATTA+GGG - chr8_1:63217625-63217644 Msa1206260:three_prime_UTR 20.0%
!!! AATAGTTTTGGATAAGAAAT+GGG + chr8_1:63217876-63217895 None:intergenic 20.0%
!! AATTAGGTCATAAAAAAAGA+GGG + chr8_1:63217953-63217972 None:intergenic 20.0%
!! AAATTAGGTCATAAAAAAAG+AGG + chr8_1:63217954-63217973 None:intergenic 20.0%
!! CTATAATGTACTATAAAGTA+TGG - chr8_1:63218239-63218258 Msa1206260:intron 20.0%
!! ACTCTAAACAAAAACATTAA+CGG + chr8_1:63218723-63218742 None:intergenic 20.0%
!! ATAAATCCAACAAAATATGA+AGG + chr8_1:63219371-63219390 None:intergenic 20.0%
!! ACTTAACTTTGATTCTTATT+TGG - chr8_1:63219437-63219456 Msa1206260:intron 20.0%
!! TCAATAATTGATATGTCATA+AGG + chr8_1:63219950-63219969 None:intergenic 20.0%
!! TAAAAATACCTATACCTAAA+AGG + chr8_1:63220130-63220149 None:intergenic 20.0%
!!! ACTACAAACTCAATAAATTT+TGG - chr8_1:63220264-63220283 Msa1206260:intron 20.0%
!! AATTTACAATTCCAAAAAAC+TGG + chr8_1:63220614-63220633 None:intergenic 20.0%
!! CACAATAATGTTAAGAAATT+TGG - chr8_1:63220745-63220764 Msa1206260:intron 20.0%
!! CATGATATTTATATTAACAC+TGG - chr8_1:63220844-63220863 Msa1206260:intron 20.0%
!!! TATATTTTACTGGTTTGAAA+AGG + chr8_1:63221198-63221217 None:intergenic 20.0%
! TTCGAAGAAAAAATGTACAA+AGG - chr8_1:63217659-63217678 Msa1206260:three_prime_UTR 25.0%
!!! GAATAGTTTTGGATAAGAAA+TGG + chr8_1:63217877-63217896 None:intergenic 25.0%
!! GGAAACATAAAGAATAGTTT+TGG + chr8_1:63217888-63217907 None:intergenic 25.0%
!!! TTTTTGGGAATTTTTGTTTG+TGG - chr8_1:63217983-63218002 Msa1206260:intron 25.0%
! TACCCTAATATGATTGAATT+GGG - chr8_1:63218026-63218045 Msa1206260:intron 25.0%
! ATCCCAATTCAATCATATTA+GGG + chr8_1:63218031-63218050 None:intergenic 25.0%
! AATCCCAATTCAATCATATT+AGG + chr8_1:63218032-63218051 None:intergenic 25.0%
!! TTTTAGACTAGTGGAATATT+TGG - chr8_1:63218103-63218122 Msa1206260:intron 25.0%
! TTTAGACTAGTGGAATATTT+GGG - chr8_1:63218104-63218123 Msa1206260:intron 25.0%
!! TGAGAGTATGATATTATTTG+CGG - chr8_1:63219006-63219025 Msa1206260:CDS 25.0%
!!! TTATGCTCTTGATTTGATTT+TGG - chr8_1:63219318-63219337 Msa1206260:intron 25.0%
! ATGGTTTAATTGGAATTCAT+AGG - chr8_1:63219559-63219578 Msa1206260:CDS 25.0%
! ACAAAACGAGTTAATTGAAT+CGG - chr8_1:63219600-63219619 Msa1206260:CDS 25.0%
! TAATTAAGTAGTGTGTTTGT+AGG - chr8_1:63220098-63220117 Msa1206260:intron 25.0%
!! AGAAAAAAATGATTTGCATG+TGG - chr8_1:63220197-63220216 Msa1206260:intron 25.0%
!! GAAAAAAATGATTTGCATGT+GGG - chr8_1:63220198-63220217 Msa1206260:intron 25.0%
! TTTGTAGTAGTTCAAACATA+TGG + chr8_1:63220252-63220271 None:intergenic 25.0%
! TGAAAATATTTCTTGTGCTT+GGG - chr8_1:63220287-63220306 Msa1206260:intron 25.0%
! TATGCAAGATATTCATTGTA+TGG + chr8_1:63220371-63220390 None:intergenic 25.0%
! AATATCTTGCATATGCATTA+TGG - chr8_1:63220378-63220397 Msa1206260:intron 25.0%
! ATATCTTGCATATGCATTAT+GGG - chr8_1:63220379-63220398 Msa1206260:intron 25.0%
!!! TTTTCTGAAAGAAGGAAAAA+TGG + chr8_1:63220486-63220505 None:intergenic 25.0%
!!! AGATATAGTTTTCTGAAAGA+AGG + chr8_1:63220494-63220513 None:intergenic 25.0%
! AACATTAGACAAAAAACAGA+AGG + chr8_1:63220650-63220669 None:intergenic 25.0%
! GAAATCAAGCTTAAAAACAA+TGG + chr8_1:63220771-63220790 None:intergenic 25.0%
! TATTTATATTAACACTGGGA+TGG - chr8_1:63220849-63220868 Msa1206260:intron 25.0%
!! GTTTTATGATATTCATGTTC+TGG - chr8_1:63220871-63220890 Msa1206260:intron 25.0%
! ATAATTGTGGTTAGAATTGT+TGG - chr8_1:63220898-63220917 Msa1206260:intron 25.0%
!! GTCTTGTTACAAATTGTATT+TGG - chr8_1:63221350-63221369 Msa1206260:five_prime_UTR 25.0%
! ATCAGAGACAAAAAACATAA+AGG + chr8_1:63221382-63221401 None:intergenic 25.0%
! TTAAAACGGAAATGAGATAA+TGG + chr8_1:63221438-63221457 None:intergenic 25.0%
! TCCACAAATTCAACTTAAAA+CGG + chr8_1:63221452-63221471 None:intergenic 25.0%
! TTCGAAGAAAAAATGTACAA+AGG - chr8_1:63217659-63217678 Msa1206260:three_prime_UTR 25.0%
!!! GAATAGTTTTGGATAAGAAA+TGG + chr8_1:63217877-63217896 None:intergenic 25.0%
!! GGAAACATAAAGAATAGTTT+TGG + chr8_1:63217888-63217907 None:intergenic 25.0%
!!! TTTTTGGGAATTTTTGTTTG+TGG - chr8_1:63217983-63218002 Msa1206260:intron 25.0%
! TACCCTAATATGATTGAATT+GGG - chr8_1:63218026-63218045 Msa1206260:intron 25.0%
! ATCCCAATTCAATCATATTA+GGG + chr8_1:63218031-63218050 None:intergenic 25.0%
! AATCCCAATTCAATCATATT+AGG + chr8_1:63218032-63218051 None:intergenic 25.0%
!! TTTTAGACTAGTGGAATATT+TGG - chr8_1:63218103-63218122 Msa1206260:intron 25.0%
! TTTAGACTAGTGGAATATTT+GGG - chr8_1:63218104-63218123 Msa1206260:intron 25.0%
!! TGAGAGTATGATATTATTTG+CGG - chr8_1:63219006-63219025 Msa1206260:CDS 25.0%
!!! TTATGCTCTTGATTTGATTT+TGG - chr8_1:63219318-63219337 Msa1206260:intron 25.0%
! ATGGTTTAATTGGAATTCAT+AGG - chr8_1:63219559-63219578 Msa1206260:CDS 25.0%
! ACAAAACGAGTTAATTGAAT+CGG - chr8_1:63219600-63219619 Msa1206260:CDS 25.0%
! TAATTAAGTAGTGTGTTTGT+AGG - chr8_1:63220098-63220117 Msa1206260:intron 25.0%
!! AGAAAAAAATGATTTGCATG+TGG - chr8_1:63220197-63220216 Msa1206260:intron 25.0%
!! GAAAAAAATGATTTGCATGT+GGG - chr8_1:63220198-63220217 Msa1206260:intron 25.0%
! TTTGTAGTAGTTCAAACATA+TGG + chr8_1:63220252-63220271 None:intergenic 25.0%
! TGAAAATATTTCTTGTGCTT+GGG - chr8_1:63220287-63220306 Msa1206260:intron 25.0%
! TATGCAAGATATTCATTGTA+TGG + chr8_1:63220371-63220390 None:intergenic 25.0%
! AATATCTTGCATATGCATTA+TGG - chr8_1:63220378-63220397 Msa1206260:intron 25.0%
! ATATCTTGCATATGCATTAT+GGG - chr8_1:63220379-63220398 Msa1206260:intron 25.0%
!!! TTTTCTGAAAGAAGGAAAAA+TGG + chr8_1:63220486-63220505 None:intergenic 25.0%
!!! AGATATAGTTTTCTGAAAGA+AGG + chr8_1:63220494-63220513 None:intergenic 25.0%
! AACATTAGACAAAAAACAGA+AGG + chr8_1:63220650-63220669 None:intergenic 25.0%
! GAAATCAAGCTTAAAAACAA+TGG + chr8_1:63220771-63220790 None:intergenic 25.0%
! TATTTATATTAACACTGGGA+TGG - chr8_1:63220849-63220868 Msa1206260:intron 25.0%
!! GTTTTATGATATTCATGTTC+TGG - chr8_1:63220871-63220890 Msa1206260:intron 25.0%
! ATAATTGTGGTTAGAATTGT+TGG - chr8_1:63220898-63220917 Msa1206260:intron 25.0%
!! GTCTTGTTACAAATTGTATT+TGG - chr8_1:63221350-63221369 Msa1206260:five_prime_UTR 25.0%
! ATCAGAGACAAAAAACATAA+AGG + chr8_1:63221382-63221401 None:intergenic 25.0%
! TTAAAACGGAAATGAGATAA+TGG + chr8_1:63221438-63221457 None:intergenic 25.0%
! TCCACAAATTCAACTTAAAA+CGG + chr8_1:63221452-63221471 None:intergenic 25.0%
CTAATTCTCAACTTAAGCAA+AGG + chr8_1:63217403-63217422 None:intergenic 30.0%
GTACCCTAATATGATTGAAT+TGG - chr8_1:63218025-63218044 Msa1206260:intron 30.0%
TGATTGAATTGGGATTTAGA+TGG - chr8_1:63218036-63218055 Msa1206260:intron 30.0%
!! TGATTCATGTTTTAGACTAG+TGG - chr8_1:63218094-63218113 Msa1206260:intron 30.0%
ACAAAAACATTAACGGTACA+AGG + chr8_1:63218716-63218735 None:intergenic 30.0%
AAGGTTACAAAGAGTTTAGA+GGG + chr8_1:63218767-63218786 None:intergenic 30.0%
AAAGGTTACAAAGAGTTTAG+AGG + chr8_1:63218768-63218787 None:intergenic 30.0%
! AACATGGACAAATATTTTCC+TGG + chr8_1:63218875-63218894 None:intergenic 30.0%
TTCTCTCCTTTATATCTTCT+AGG - chr8_1:63218902-63218921 Msa1206260:intron 30.0%
TCTCTCCTTTATATCTTCTA+GGG - chr8_1:63218903-63218922 Msa1206260:intron 30.0%
TCTCTTTCCCTTTCAAATAA+AGG - chr8_1:63218951-63218970 Msa1206260:CDS 30.0%
TTACAATATGAGAGAGATTG+AGG - chr8_1:63219044-63219063 Msa1206260:CDS 30.0%
TACAATATGAGAGAGATTGA+GGG - chr8_1:63219045-63219064 Msa1206260:CDS 30.0%
!!! TTAGTTTTGCATTTATGCGT+TGG - chr8_1:63219111-63219130 Msa1206260:intron 30.0%
! TCAAGAGCATAATCATAGTA+AGG + chr8_1:63219310-63219329 None:intergenic 30.0%
! AGCTTTCCTTCATATTTTGT+TGG - chr8_1:63219362-63219381 Msa1206260:intron 30.0%
TTGGATTTATTGTACAAGCA+TGG - chr8_1:63219381-63219400 Msa1206260:intron 30.0%
TTATTGTACAACTGCTTCTA+TGG - chr8_1:63219540-63219559 Msa1206260:CDS 30.0%
AACTGCTTCTATGGTTTAAT+TGG - chr8_1:63219549-63219568 Msa1206260:CDS 30.0%
AAGTACAAGAACTATGACTT+TGG - chr8_1:63219783-63219802 Msa1206260:intron 30.0%
AATAAAGATCTTCACACCTA+GGG + chr8_1:63219899-63219918 None:intergenic 30.0%
TAATAAAGATCTTCACACCT+AGG + chr8_1:63219900-63219919 None:intergenic 30.0%
GTGAAGATCTTTATTATCCT+CGG - chr8_1:63219904-63219923 Msa1206260:intron 30.0%
AAAGCAAGGAAAAAAAAGTG+AGG + chr8_1:63220048-63220067 None:intergenic 30.0%
TCAAATGAAACTCAAAAGCA+AGG + chr8_1:63220062-63220081 None:intergenic 30.0%
AATATATGCCAGCTAGTATT+TGG - chr8_1:63220167-63220186 Msa1206260:intron 30.0%
GTGAAAATATTTCTTGTGCT+TGG - chr8_1:63220286-63220305 Msa1206260:intron 30.0%
TATCTTGCATATGCATTATG+GGG - chr8_1:63220380-63220399 Msa1206260:intron 30.0%
!! ATATTCGTTTTTGATAGACC+TGG + chr8_1:63220420-63220439 None:intergenic 30.0%
!! TTTGTTTAGTATCGATTCCA+TGG - chr8_1:63220709-63220728 Msa1206260:intron 30.0%
! ATGTTCTGGCTATATAATTG+TGG - chr8_1:63220885-63220904 Msa1206260:intron 30.0%
TAAGCTTTCATGAAAGTAAG+AGG - chr8_1:63221110-63221129 Msa1206260:CDS 30.0%
CAGAAGAGTTAAATGAGATT+CGG + chr8_1:63221140-63221159 None:intergenic 30.0%
! AACGGATGTCTATATTTTAC+TGG + chr8_1:63221208-63221227 None:intergenic 30.0%
!! ACATCCGTTTTACTTGTTTT+AGG - chr8_1:63221219-63221238 Msa1206260:five_prime_UTR 30.0%
!!! TCCGTTTTAAGTTGAATTTG+TGG - chr8_1:63221448-63221467 Msa1206260:five_prime_UTR 30.0%
CTAATTCTCAACTTAAGCAA+AGG + chr8_1:63217403-63217422 None:intergenic 30.0%
GTACCCTAATATGATTGAAT+TGG - chr8_1:63218025-63218044 Msa1206260:intron 30.0%
TGATTGAATTGGGATTTAGA+TGG - chr8_1:63218036-63218055 Msa1206260:intron 30.0%
!! TGATTCATGTTTTAGACTAG+TGG - chr8_1:63218094-63218113 Msa1206260:intron 30.0%
ACAAAAACATTAACGGTACA+AGG + chr8_1:63218716-63218735 None:intergenic 30.0%
AAGGTTACAAAGAGTTTAGA+GGG + chr8_1:63218767-63218786 None:intergenic 30.0%
AAAGGTTACAAAGAGTTTAG+AGG + chr8_1:63218768-63218787 None:intergenic 30.0%
! AACATGGACAAATATTTTCC+TGG + chr8_1:63218875-63218894 None:intergenic 30.0%
TTCTCTCCTTTATATCTTCT+AGG - chr8_1:63218902-63218921 Msa1206260:intron 30.0%
TCTCTCCTTTATATCTTCTA+GGG - chr8_1:63218903-63218922 Msa1206260:intron 30.0%
TCTCTTTCCCTTTCAAATAA+AGG - chr8_1:63218951-63218970 Msa1206260:CDS 30.0%
TTACAATATGAGAGAGATTG+AGG - chr8_1:63219044-63219063 Msa1206260:CDS 30.0%
TACAATATGAGAGAGATTGA+GGG - chr8_1:63219045-63219064 Msa1206260:CDS 30.0%
!!! TTAGTTTTGCATTTATGCGT+TGG - chr8_1:63219111-63219130 Msa1206260:intron 30.0%
! TCAAGAGCATAATCATAGTA+AGG + chr8_1:63219310-63219329 None:intergenic 30.0%
! AGCTTTCCTTCATATTTTGT+TGG - chr8_1:63219362-63219381 Msa1206260:intron 30.0%
TTGGATTTATTGTACAAGCA+TGG - chr8_1:63219381-63219400 Msa1206260:intron 30.0%
TTATTGTACAACTGCTTCTA+TGG - chr8_1:63219540-63219559 Msa1206260:CDS 30.0%
AACTGCTTCTATGGTTTAAT+TGG - chr8_1:63219549-63219568 Msa1206260:CDS 30.0%
AAGTACAAGAACTATGACTT+TGG - chr8_1:63219783-63219802 Msa1206260:intron 30.0%
AATAAAGATCTTCACACCTA+GGG + chr8_1:63219899-63219918 None:intergenic 30.0%
TAATAAAGATCTTCACACCT+AGG + chr8_1:63219900-63219919 None:intergenic 30.0%
GTGAAGATCTTTATTATCCT+CGG - chr8_1:63219904-63219923 Msa1206260:intron 30.0%
AAAGCAAGGAAAAAAAAGTG+AGG + chr8_1:63220048-63220067 None:intergenic 30.0%
TCAAATGAAACTCAAAAGCA+AGG + chr8_1:63220062-63220081 None:intergenic 30.0%
AATATATGCCAGCTAGTATT+TGG - chr8_1:63220167-63220186 Msa1206260:intron 30.0%
GTGAAAATATTTCTTGTGCT+TGG - chr8_1:63220286-63220305 Msa1206260:intron 30.0%
TATCTTGCATATGCATTATG+GGG - chr8_1:63220380-63220399 Msa1206260:intron 30.0%
!! ATATTCGTTTTTGATAGACC+TGG + chr8_1:63220420-63220439 None:intergenic 30.0%
!! TTTGTTTAGTATCGATTCCA+TGG - chr8_1:63220709-63220728 Msa1206260:intron 30.0%
! ATGTTCTGGCTATATAATTG+TGG - chr8_1:63220885-63220904 Msa1206260:intron 30.0%
TAAGCTTTCATGAAAGTAAG+AGG - chr8_1:63221110-63221129 Msa1206260:CDS 30.0%
CAGAAGAGTTAAATGAGATT+CGG + chr8_1:63221140-63221159 None:intergenic 30.0%
! AACGGATGTCTATATTTTAC+TGG + chr8_1:63221208-63221227 None:intergenic 30.0%
!! ACATCCGTTTTACTTGTTTT+AGG - chr8_1:63221219-63221238 Msa1206260:five_prime_UTR 30.0%
!!! TCCGTTTTAAGTTGAATTTG+TGG - chr8_1:63221448-63221467 Msa1206260:five_prime_UTR 30.0%
TCAACTTAAGCAAAGGTAGT+AGG + chr8_1:63217396-63217415 None:intergenic 35.0%
!!! AGGGTTTTTGTTTTGGATGA+GGG + chr8_1:63217493-63217512 None:intergenic 35.0%
!!! TAGGGTTTTTGTTTTGGATG+AGG + chr8_1:63217494-63217513 None:intergenic 35.0%
!! GTGTGTTAGGGTTTTTGTTT+TGG + chr8_1:63217500-63217519 None:intergenic 35.0%
TTGAGACACAAAGTGTGTTA+GGG + chr8_1:63217512-63217531 None:intergenic 35.0%
! TTTGAGACACAAAGTGTGTT+AGG + chr8_1:63217513-63217532 None:intergenic 35.0%
GTCTCAAATCTACAACCAAA+AGG - chr8_1:63217525-63217544 Msa1206260:three_prime_UTR 35.0%
TATATCCTTCTACCTTAGCT+GGG + chr8_1:63217572-63217591 None:intergenic 35.0%
ATATATCCTTCTACCTTAGC+TGG + chr8_1:63217573-63217592 None:intergenic 35.0%
GAAAAAATGTACAAAGGTCG+TGG - chr8_1:63217665-63217684 Msa1206260:three_prime_UTR 35.0%
!!! TTGTTGGTTTTGCCATTGAT+GGG + chr8_1:63217782-63217801 None:intergenic 35.0%
!!! TTTGTTGGTTTTGCCATTGA+TGG + chr8_1:63217783-63217802 None:intergenic 35.0%
! ATTGGTTTCTCTCTCTTTGT+TGG + chr8_1:63217798-63217817 None:intergenic 35.0%
!! AGAAATATTGGCAGTTTTGG+AGG + chr8_1:63217849-63217868 None:intergenic 35.0%
TCCAAAACTGCCAATATTTC+TGG - chr8_1:63217848-63217867 Msa1206260:CDS 35.0%
! ACCAGAAATATTGGCAGTTT+TGG + chr8_1:63217852-63217871 None:intergenic 35.0%
GAAATGGGTACCAGAAATAT+TGG + chr8_1:63217861-63217880 None:intergenic 35.0%
ATTGGGATTTAGATGGTTGT+TGG - chr8_1:63218043-63218062 Msa1206260:intron 35.0%
AAAAAAAATTGGGTCCGAAG+TGG + chr8_1:63218201-63218220 None:intergenic 35.0%
TAGAACCCAATTTGTGCAAA+CGG - chr8_1:63218278-63218297 Msa1206260:intron 35.0%
GGAAGCTTAGAGGTAAATTA+GGG - chr8_1:63218299-63218318 Msa1206260:intron 35.0%
TATGTTGTTGTGTGATCGAT+CGG - chr8_1:63218355-63218374 Msa1206260:intron 35.0%
GTGACTTATCATTTCCGATA+AGG - chr8_1:63218389-63218408 Msa1206260:intron 35.0%
GTGTTCAGTGATTACCTTAT+CGG + chr8_1:63218406-63218425 None:intergenic 35.0%
! CTGGTGATTTTTGTCTTTAC+TGG - chr8_1:63218676-63218695 Msa1206260:intron 35.0%
AGGTTACAAAGAGTTTAGAG+GGG + chr8_1:63218766-63218785 None:intergenic 35.0%
! ATATTTTCCTGGAGCATACA+AGG + chr8_1:63218864-63218883 None:intergenic 35.0%
AGGAACCCTAGAAGATATAA+AGG + chr8_1:63218911-63218930 None:intergenic 35.0%
TAACAAGCAGAAACAGCATA+AGG + chr8_1:63218931-63218950 None:intergenic 35.0%
! AGGAAATGAGTTCTTTTGTG+AGG - chr8_1:63219228-63219247 Msa1206260:CDS 35.0%
! CATAATCATAGTAAGGCACT+TGG + chr8_1:63219303-63219322 None:intergenic 35.0%
CGTTACATATTGACAAGCAA+AGG - chr8_1:63219655-63219674 Msa1206260:CDS 35.0%
CATATTGACAAGCAAAGGAA+TGG - chr8_1:63219660-63219679 Msa1206260:CDS 35.0%
! CTTTTCATGCTTTACTATCC+AGG - chr8_1:63219717-63219736 Msa1206260:intron 35.0%
TGTTAACAATGTCAATCTCC+TGG + chr8_1:63219738-63219757 None:intergenic 35.0%
! ATTTTCACAGTACTTGACCT+AGG + chr8_1:63219870-63219889 None:intergenic 35.0%
CTGTGAAAATATATTGCCCT+AGG - chr8_1:63219880-63219899 Msa1206260:intron 35.0%
AAATAGCTTCAGTGACATAG+TGG + chr8_1:63220013-63220032 None:intergenic 35.0%
! TTTGTAGGATGTGACCTTTT+AGG - chr8_1:63220113-63220132 Msa1206260:intron 35.0%
TTTCCATACCAAATACTAGC+TGG + chr8_1:63220178-63220197 None:intergenic 35.0%
ATCTTGCATATGCATTATGG+GGG - chr8_1:63220381-63220400 Msa1206260:intron 35.0%
! AGTCAACAAACACTTTTCAG+AGG + chr8_1:63220449-63220468 None:intergenic 35.0%
GGTTACAACAACTAGAAACA+CGG + chr8_1:63220521-63220540 None:intergenic 35.0%
! ATGGCAGTTTCTGAAAACTT+TGG - chr8_1:63220550-63220569 Msa1206260:intron 35.0%
! TGGCAGTTTCTGAAAACTTT+GGG - chr8_1:63220551-63220570 Msa1206260:intron 35.0%
!!! CTGAAAAGTGACCAGTTTTT+TGG - chr8_1:63220600-63220619 Msa1206260:intron 35.0%
! GACATTGATGGAGCTTATTT+TGG - chr8_1:63220967-63220986 Msa1206260:intron 35.0%
AGTTTGAACCCAAAAACTCT+TGG + chr8_1:63221066-63221085 None:intergenic 35.0%
CTCATTTAACTCTTCTGTTG+TGG - chr8_1:63221143-63221162 Msa1206260:CDS 35.0%
CGCTCCTAAAACAAGTAAAA+CGG + chr8_1:63221226-63221245 None:intergenic 35.0%
TTGAAGCTGAAAGTGAAACT+AGG + chr8_1:63221287-63221306 None:intergenic 35.0%
AATTCAATGAGCAAGTGCTT+AGG - chr8_1:63221306-63221325 Msa1206260:five_prime_UTR 35.0%
TCAACTTAAGCAAAGGTAGT+AGG + chr8_1:63217396-63217415 None:intergenic 35.0%
!!! AGGGTTTTTGTTTTGGATGA+GGG + chr8_1:63217493-63217512 None:intergenic 35.0%
!!! TAGGGTTTTTGTTTTGGATG+AGG + chr8_1:63217494-63217513 None:intergenic 35.0%
!! GTGTGTTAGGGTTTTTGTTT+TGG + chr8_1:63217500-63217519 None:intergenic 35.0%
TTGAGACACAAAGTGTGTTA+GGG + chr8_1:63217512-63217531 None:intergenic 35.0%
! TTTGAGACACAAAGTGTGTT+AGG + chr8_1:63217513-63217532 None:intergenic 35.0%
GTCTCAAATCTACAACCAAA+AGG - chr8_1:63217525-63217544 Msa1206260:three_prime_UTR 35.0%
TATATCCTTCTACCTTAGCT+GGG + chr8_1:63217572-63217591 None:intergenic 35.0%
ATATATCCTTCTACCTTAGC+TGG + chr8_1:63217573-63217592 None:intergenic 35.0%
GAAAAAATGTACAAAGGTCG+TGG - chr8_1:63217665-63217684 Msa1206260:three_prime_UTR 35.0%
!!! TTGTTGGTTTTGCCATTGAT+GGG + chr8_1:63217782-63217801 None:intergenic 35.0%
!!! TTTGTTGGTTTTGCCATTGA+TGG + chr8_1:63217783-63217802 None:intergenic 35.0%
! ATTGGTTTCTCTCTCTTTGT+TGG + chr8_1:63217798-63217817 None:intergenic 35.0%
!! AGAAATATTGGCAGTTTTGG+AGG + chr8_1:63217849-63217868 None:intergenic 35.0%
TCCAAAACTGCCAATATTTC+TGG - chr8_1:63217848-63217867 Msa1206260:CDS 35.0%
! ACCAGAAATATTGGCAGTTT+TGG + chr8_1:63217852-63217871 None:intergenic 35.0%
GAAATGGGTACCAGAAATAT+TGG + chr8_1:63217861-63217880 None:intergenic 35.0%
ATTGGGATTTAGATGGTTGT+TGG - chr8_1:63218043-63218062 Msa1206260:intron 35.0%
AAAAAAAATTGGGTCCGAAG+TGG + chr8_1:63218201-63218220 None:intergenic 35.0%
TAGAACCCAATTTGTGCAAA+CGG - chr8_1:63218278-63218297 Msa1206260:intron 35.0%
GGAAGCTTAGAGGTAAATTA+GGG - chr8_1:63218299-63218318 Msa1206260:intron 35.0%
TATGTTGTTGTGTGATCGAT+CGG - chr8_1:63218355-63218374 Msa1206260:intron 35.0%
GTGACTTATCATTTCCGATA+AGG - chr8_1:63218389-63218408 Msa1206260:intron 35.0%
GTGTTCAGTGATTACCTTAT+CGG + chr8_1:63218406-63218425 None:intergenic 35.0%
! CTGGTGATTTTTGTCTTTAC+TGG - chr8_1:63218676-63218695 Msa1206260:intron 35.0%
AGGTTACAAAGAGTTTAGAG+GGG + chr8_1:63218766-63218785 None:intergenic 35.0%
! ATATTTTCCTGGAGCATACA+AGG + chr8_1:63218864-63218883 None:intergenic 35.0%
AGGAACCCTAGAAGATATAA+AGG + chr8_1:63218911-63218930 None:intergenic 35.0%
TAACAAGCAGAAACAGCATA+AGG + chr8_1:63218931-63218950 None:intergenic 35.0%
! AGGAAATGAGTTCTTTTGTG+AGG - chr8_1:63219228-63219247 Msa1206260:CDS 35.0%
! CATAATCATAGTAAGGCACT+TGG + chr8_1:63219303-63219322 None:intergenic 35.0%
CGTTACATATTGACAAGCAA+AGG - chr8_1:63219655-63219674 Msa1206260:CDS 35.0%
CATATTGACAAGCAAAGGAA+TGG - chr8_1:63219660-63219679 Msa1206260:CDS 35.0%
! CTTTTCATGCTTTACTATCC+AGG - chr8_1:63219717-63219736 Msa1206260:intron 35.0%
TGTTAACAATGTCAATCTCC+TGG + chr8_1:63219738-63219757 None:intergenic 35.0%
! ATTTTCACAGTACTTGACCT+AGG + chr8_1:63219870-63219889 None:intergenic 35.0%
CTGTGAAAATATATTGCCCT+AGG - chr8_1:63219880-63219899 Msa1206260:intron 35.0%
AAATAGCTTCAGTGACATAG+TGG + chr8_1:63220013-63220032 None:intergenic 35.0%
! TTTGTAGGATGTGACCTTTT+AGG - chr8_1:63220113-63220132 Msa1206260:intron 35.0%
TTTCCATACCAAATACTAGC+TGG + chr8_1:63220178-63220197 None:intergenic 35.0%
ATCTTGCATATGCATTATGG+GGG - chr8_1:63220381-63220400 Msa1206260:intron 35.0%
! AGTCAACAAACACTTTTCAG+AGG + chr8_1:63220449-63220468 None:intergenic 35.0%
GGTTACAACAACTAGAAACA+CGG + chr8_1:63220521-63220540 None:intergenic 35.0%
! ATGGCAGTTTCTGAAAACTT+TGG - chr8_1:63220550-63220569 Msa1206260:intron 35.0%
! TGGCAGTTTCTGAAAACTTT+GGG - chr8_1:63220551-63220570 Msa1206260:intron 35.0%
!!! CTGAAAAGTGACCAGTTTTT+TGG - chr8_1:63220600-63220619 Msa1206260:intron 35.0%
! GACATTGATGGAGCTTATTT+TGG - chr8_1:63220967-63220986 Msa1206260:intron 35.0%
AGTTTGAACCCAAAAACTCT+TGG + chr8_1:63221066-63221085 None:intergenic 35.0%
CTCATTTAACTCTTCTGTTG+TGG - chr8_1:63221143-63221162 Msa1206260:CDS 35.0%
CGCTCCTAAAACAAGTAAAA+CGG + chr8_1:63221226-63221245 None:intergenic 35.0%
TTGAAGCTGAAAGTGAAACT+AGG + chr8_1:63221287-63221306 None:intergenic 35.0%
AATTCAATGAGCAAGTGCTT+AGG - chr8_1:63221306-63221325 Msa1206260:five_prime_UTR 35.0%
!! CCTTTCGGCTATTTTCCTTT+TGG + chr8_1:63217543-63217562 None:intergenic 40.0%
CCAAAAGGAAAATAGCCGAA+AGG - chr8_1:63217540-63217559 Msa1206260:three_prime_UTR 40.0%
TTAGCTGGGAAAATGCCTTT+CGG + chr8_1:63217558-63217577 None:intergenic 40.0%
! ATTTTCCCAGCTAAGGTAGA+AGG - chr8_1:63217564-63217583 Msa1206260:three_prime_UTR 40.0%
AAAATGTACAAAGGTCGTGG+TGG - chr8_1:63217668-63217687 Msa1206260:three_prime_UTR 40.0%
GAGAGAAACCAATACCATCA+AGG - chr8_1:63217805-63217824 Msa1206260:CDS 40.0%
TTTGGAGGATCGTTGAAGAA+GGG + chr8_1:63217834-63217853 None:intergenic 40.0%
!! TTTTGGAGGATCGTTGAAGA+AGG + chr8_1:63217835-63217854 None:intergenic 40.0%
GATATCCAGTCTATCAAGCT+AGG + chr8_1:63218141-63218160 None:intergenic 40.0%
ACTCACACTTTACAACTTCG+AGG + chr8_1:63218175-63218194 None:intergenic 40.0%
! AAAGTGTGAGTTTGCCACTT+CGG - chr8_1:63218184-63218203 Msa1206260:intron 40.0%
AGCTTCCGTTTGCACAAATT+GGG + chr8_1:63218286-63218305 None:intergenic 40.0%
AAGCTTCCGTTTGCACAAAT+TGG + chr8_1:63218287-63218306 None:intergenic 40.0%
CGGAAGCTTAGAGGTAAATT+AGG - chr8_1:63218298-63218317 Msa1206260:intron 40.0%
AGCTTAGAGGTAAATTAGGG+AGG - chr8_1:63218302-63218321 Msa1206260:intron 40.0%
TTAGAGGTAAATTAGGGAGG+AGG - chr8_1:63218305-63218324 Msa1206260:intron 40.0%
TAGAGGTAAATTAGGGAGGA+GGG - chr8_1:63218306-63218325 Msa1206260:intron 40.0%
ATGTTGTTGTGTGATCGATC+GGG - chr8_1:63218356-63218375 Msa1206260:intron 40.0%
TCTTGATCTTATCCACCAGT+TGG + chr8_1:63218428-63218447 None:intergenic 40.0%
ATAAGATCAAGACCACCTTG+CGG - chr8_1:63218436-63218455 Msa1206260:intron 40.0%
TTCCATATCCTACCTGTAGT+AGG + chr8_1:63218499-63218518 None:intergenic 40.0%
! TTAGAGTACTTCTTGTACCC+TGG - chr8_1:63218736-63218755 Msa1206260:intron 40.0%
! TAGAGTACTTCTTGTACCCT+GGG - chr8_1:63218737-63218756 Msa1206260:intron 40.0%
TTTATCACCTTGTATGCTCC+AGG - chr8_1:63218854-63218873 Msa1206260:intron 40.0%
AGGAGAGAAAAGACAGAACA+TGG + chr8_1:63218891-63218910 None:intergenic 40.0%
TGAAACAGACAGTGAAGAGT+CGG - chr8_1:63219147-63219166 Msa1206260:intron 40.0%
CACAAAGGTTGAAGTCATCT+TGG + chr8_1:63219270-63219289 None:intergenic 40.0%
CAAGATGACTTCAACCTTTG+TGG - chr8_1:63219268-63219287 Msa1206260:CDS 40.0%
TTGGATGTTGAATCCTCTCA+TGG - chr8_1:63219337-63219356 Msa1206260:intron 40.0%
CATAGGTGATATGTTCACAG+AGG - chr8_1:63219576-63219595 Msa1206260:CDS 40.0%
AAGGATACTGCCTTGATACT+TGG + chr8_1:63219931-63219950 None:intergenic 40.0%
!! GGATGTGACCTTTTAGGTAT+AGG - chr8_1:63220119-63220138 Msa1206260:intron 40.0%
ATGCCAGCTAGTATTTGGTA+TGG - chr8_1:63220172-63220191 Msa1206260:intron 40.0%
TATAAACTGCTCTCTGGACA+TGG - chr8_1:63220222-63220241 Msa1206260:intron 40.0%
AAGACTTTGCTGCTCCATAA+TGG - chr8_1:63220328-63220347 Msa1206260:intron 40.0%
CTAGTTGTTGTAACCTCAAG+TGG - chr8_1:63220526-63220545 Msa1206260:intron 40.0%
TGTTGTAACCTCAAGTGGAA+TGG - chr8_1:63220531-63220550 Msa1206260:intron 40.0%
TCAATGTCTAGACAGAGTCA+AGG + chr8_1:63220955-63220974 None:intergenic 40.0%
TGACTCTGTCTAGACATTGA+TGG - chr8_1:63220955-63220974 Msa1206260:intron 40.0%
TATGTCATCAAGAAGAGGTG+TGG + chr8_1:63221003-63221022 None:intergenic 40.0%
! CACCTCTTCTTGATGACATA+TGG - chr8_1:63221003-63221022 Msa1206260:CDS 40.0%
GTCCATATGTCATCAAGAAG+AGG + chr8_1:63221008-63221027 None:intergenic 40.0%
! GCTACGTTCCAAGAGTTTTT+GGG - chr8_1:63221055-63221074 Msa1206260:CDS 40.0%
AGCTTAAACTTCCAGCTTCA+TGG + chr8_1:63221096-63221115 None:intergenic 40.0%
!! CCTTTCGGCTATTTTCCTTT+TGG + chr8_1:63217543-63217562 None:intergenic 40.0%
CCAAAAGGAAAATAGCCGAA+AGG - chr8_1:63217540-63217559 Msa1206260:three_prime_UTR 40.0%
TTAGCTGGGAAAATGCCTTT+CGG + chr8_1:63217558-63217577 None:intergenic 40.0%
! ATTTTCCCAGCTAAGGTAGA+AGG - chr8_1:63217564-63217583 Msa1206260:three_prime_UTR 40.0%
AAAATGTACAAAGGTCGTGG+TGG - chr8_1:63217668-63217687 Msa1206260:three_prime_UTR 40.0%
GAGAGAAACCAATACCATCA+AGG - chr8_1:63217805-63217824 Msa1206260:CDS 40.0%
TTTGGAGGATCGTTGAAGAA+GGG + chr8_1:63217834-63217853 None:intergenic 40.0%
!! TTTTGGAGGATCGTTGAAGA+AGG + chr8_1:63217835-63217854 None:intergenic 40.0%
GATATCCAGTCTATCAAGCT+AGG + chr8_1:63218141-63218160 None:intergenic 40.0%
ACTCACACTTTACAACTTCG+AGG + chr8_1:63218175-63218194 None:intergenic 40.0%
! AAAGTGTGAGTTTGCCACTT+CGG - chr8_1:63218184-63218203 Msa1206260:intron 40.0%
AGCTTCCGTTTGCACAAATT+GGG + chr8_1:63218286-63218305 None:intergenic 40.0%
AAGCTTCCGTTTGCACAAAT+TGG + chr8_1:63218287-63218306 None:intergenic 40.0%
CGGAAGCTTAGAGGTAAATT+AGG - chr8_1:63218298-63218317 Msa1206260:intron 40.0%
AGCTTAGAGGTAAATTAGGG+AGG - chr8_1:63218302-63218321 Msa1206260:intron 40.0%
TTAGAGGTAAATTAGGGAGG+AGG - chr8_1:63218305-63218324 Msa1206260:intron 40.0%
TAGAGGTAAATTAGGGAGGA+GGG - chr8_1:63218306-63218325 Msa1206260:intron 40.0%
ATGTTGTTGTGTGATCGATC+GGG - chr8_1:63218356-63218375 Msa1206260:intron 40.0%
TCTTGATCTTATCCACCAGT+TGG + chr8_1:63218428-63218447 None:intergenic 40.0%
ATAAGATCAAGACCACCTTG+CGG - chr8_1:63218436-63218455 Msa1206260:intron 40.0%
TTCCATATCCTACCTGTAGT+AGG + chr8_1:63218499-63218518 None:intergenic 40.0%
! TTAGAGTACTTCTTGTACCC+TGG - chr8_1:63218736-63218755 Msa1206260:intron 40.0%
! TAGAGTACTTCTTGTACCCT+GGG - chr8_1:63218737-63218756 Msa1206260:intron 40.0%
TTTATCACCTTGTATGCTCC+AGG - chr8_1:63218854-63218873 Msa1206260:intron 40.0%
AGGAGAGAAAAGACAGAACA+TGG + chr8_1:63218891-63218910 None:intergenic 40.0%
TGAAACAGACAGTGAAGAGT+CGG - chr8_1:63219147-63219166 Msa1206260:intron 40.0%
CACAAAGGTTGAAGTCATCT+TGG + chr8_1:63219270-63219289 None:intergenic 40.0%
CAAGATGACTTCAACCTTTG+TGG - chr8_1:63219268-63219287 Msa1206260:CDS 40.0%
TTGGATGTTGAATCCTCTCA+TGG - chr8_1:63219337-63219356 Msa1206260:intron 40.0%
CATAGGTGATATGTTCACAG+AGG - chr8_1:63219576-63219595 Msa1206260:CDS 40.0%
AAGGATACTGCCTTGATACT+TGG + chr8_1:63219931-63219950 None:intergenic 40.0%
!! GGATGTGACCTTTTAGGTAT+AGG - chr8_1:63220119-63220138 Msa1206260:intron 40.0%
ATGCCAGCTAGTATTTGGTA+TGG - chr8_1:63220172-63220191 Msa1206260:intron 40.0%
TATAAACTGCTCTCTGGACA+TGG - chr8_1:63220222-63220241 Msa1206260:intron 40.0%
AAGACTTTGCTGCTCCATAA+TGG - chr8_1:63220328-63220347 Msa1206260:intron 40.0%
CTAGTTGTTGTAACCTCAAG+TGG - chr8_1:63220526-63220545 Msa1206260:intron 40.0%
TGTTGTAACCTCAAGTGGAA+TGG - chr8_1:63220531-63220550 Msa1206260:intron 40.0%
TCAATGTCTAGACAGAGTCA+AGG + chr8_1:63220955-63220974 None:intergenic 40.0%
TGACTCTGTCTAGACATTGA+TGG - chr8_1:63220955-63220974 Msa1206260:intron 40.0%
TATGTCATCAAGAAGAGGTG+TGG + chr8_1:63221003-63221022 None:intergenic 40.0%
! CACCTCTTCTTGATGACATA+TGG - chr8_1:63221003-63221022 Msa1206260:CDS 40.0%
GTCCATATGTCATCAAGAAG+AGG + chr8_1:63221008-63221027 None:intergenic 40.0%
! GCTACGTTCCAAGAGTTTTT+GGG - chr8_1:63221055-63221074 Msa1206260:CDS 40.0%
AGCTTAAACTTCCAGCTTCA+TGG + chr8_1:63221096-63221115 None:intergenic 40.0%
!!! GAAAGGCATTTTCCCAGCTA+AGG - chr8_1:63217557-63217576 Msa1206260:three_prime_UTR 45.0%
! TGGTTCTGCCTCCAACAAAT+CGG - chr8_1:63217688-63217707 Msa1206260:three_prime_UTR 45.0%
! CTTTCGATCCTCCGATTTGT+TGG + chr8_1:63217702-63217721 None:intergenic 45.0%
! AAGGGGATCCTTGATGGTAT+TGG + chr8_1:63217816-63217835 None:intergenic 45.0%
TTGAAGAAGGGGATCCTTGA+TGG + chr8_1:63217822-63217841 None:intergenic 45.0%
TTGGAGGATCGTTGAAGAAG+GGG + chr8_1:63217833-63217852 None:intergenic 45.0%
TGAGACCTAGCTTGATAGAC+TGG - chr8_1:63218133-63218152 Msa1206260:intron 45.0%
ATAGACTGGATATCCTCACC+CGG - chr8_1:63218147-63218166 Msa1206260:intron 45.0%
TTGTGCAAACGGAAGCTTAG+AGG - chr8_1:63218289-63218308 Msa1206260:intron 45.0%
AGAGGTAAATTAGGGAGGAG+GGG - chr8_1:63218307-63218326 Msa1206260:intron 45.0%
!!! GGTTAGGTTGGCTTTTGGTT+TGG - chr8_1:63218332-63218351 Msa1206260:intron 45.0%
GGTAATCACTGAACACCAAC+TGG - chr8_1:63218410-63218429 Msa1206260:intron 45.0%
AATCACTGAACACCAACTGG+TGG - chr8_1:63218413-63218432 Msa1206260:intron 45.0%
TAAGAACCATTTCCGCAAGG+TGG + chr8_1:63218451-63218470 None:intergenic 45.0%
ACCTTGCGGAAATGGTTCTT+AGG - chr8_1:63218450-63218469 Msa1206260:intron 45.0%
CCTTGCGGAAATGGTTCTTA+GGG - chr8_1:63218451-63218470 Msa1206260:intron 45.0%
!! TGGTTCTTAGGGAAGCATTC+TGG - chr8_1:63218462-63218481 Msa1206260:intron 45.0%
GACATTACTGCTCCTACTAC+AGG - chr8_1:63218484-63218503 Msa1206260:intron 45.0%
TTACTGCTCCTACTACAGGT+AGG - chr8_1:63218488-63218507 Msa1206260:intron 45.0%
CTCCTACTACAGGTAGGATA+TGG - chr8_1:63218494-63218513 Msa1206260:intron 45.0%
TCTTTGTCTCGTTCAGCTGA+TGG - chr8_1:63218597-63218616 Msa1206260:intron 45.0%
CTTTGTCTCGTTCAGCTGAT+GGG - chr8_1:63218598-63218617 Msa1206260:intron 45.0%
! GCTGATGGGTAATCTGTTTC+TGG - chr8_1:63218612-63218631 Msa1206260:intron 45.0%
!! TCTGTTTCTGGTGCTTTCCT+TGG - chr8_1:63218624-63218643 Msa1206260:intron 45.0%
!! CTGTTTCTGGTGCTTTCCTT+GGG - chr8_1:63218625-63218644 Msa1206260:intron 45.0%
! CTTTCCTTGGGTTTGGAGTT+GGG - chr8_1:63218637-63218656 Msa1206260:intron 45.0%
! TTTCCTTGGGTTTGGAGTTG+GGG - chr8_1:63218638-63218657 Msa1206260:intron 45.0%
AGGACACATCTTGGATCTCA+TGG - chr8_1:63219191-63219210 Msa1206260:CDS 45.0%
! TCATGGTTCTGCAATCTCAG+AGG - chr8_1:63219208-63219227 Msa1206260:CDS 45.0%
AAGCAAAGGAATGGCTGCTA+TGG - chr8_1:63219669-63219688 Msa1206260:CDS 45.0%
GTCCAGAGCAGTAAACTCTT+GGG + chr8_1:63219815-63219834 None:intergenic 45.0%
TGTCCAGAGCAGTAAACTCT+TGG + chr8_1:63219816-63219835 None:intergenic 45.0%
TATCCTCGGTCCAAGTATCA+AGG - chr8_1:63219918-63219937 Msa1206260:intron 45.0%
! GTGGGTTATAAACTGCTCTC+TGG - chr8_1:63220216-63220235 Msa1206260:intron 45.0%
AGAAACTGCCATTCCACTTG+AGG + chr8_1:63220542-63220561 None:intergenic 45.0%
TGTGCGATAGAGAAAGACCA+TGG + chr8_1:63220729-63220748 None:intergenic 45.0%
! GGCTACGTTCCAAGAGTTTT+TGG - chr8_1:63221054-63221073 Msa1206260:CDS 45.0%
AACTTCACAAGCCATGAAGC+TGG - chr8_1:63221082-63221101 Msa1206260:CDS 45.0%
!!! GAAAGGCATTTTCCCAGCTA+AGG - chr8_1:63217557-63217576 Msa1206260:three_prime_UTR 45.0%
! TGGTTCTGCCTCCAACAAAT+CGG - chr8_1:63217688-63217707 Msa1206260:three_prime_UTR 45.0%
! CTTTCGATCCTCCGATTTGT+TGG + chr8_1:63217702-63217721 None:intergenic 45.0%
! AAGGGGATCCTTGATGGTAT+TGG + chr8_1:63217816-63217835 None:intergenic 45.0%
TTGAAGAAGGGGATCCTTGA+TGG + chr8_1:63217822-63217841 None:intergenic 45.0%
TTGGAGGATCGTTGAAGAAG+GGG + chr8_1:63217833-63217852 None:intergenic 45.0%
TGAGACCTAGCTTGATAGAC+TGG - chr8_1:63218133-63218152 Msa1206260:intron 45.0%
ATAGACTGGATATCCTCACC+CGG - chr8_1:63218147-63218166 Msa1206260:intron 45.0%
TTGTGCAAACGGAAGCTTAG+AGG - chr8_1:63218289-63218308 Msa1206260:intron 45.0%
AGAGGTAAATTAGGGAGGAG+GGG - chr8_1:63218307-63218326 Msa1206260:intron 45.0%
!!! GGTTAGGTTGGCTTTTGGTT+TGG - chr8_1:63218332-63218351 Msa1206260:intron 45.0%
GGTAATCACTGAACACCAAC+TGG - chr8_1:63218410-63218429 Msa1206260:intron 45.0%
AATCACTGAACACCAACTGG+TGG - chr8_1:63218413-63218432 Msa1206260:intron 45.0%
TAAGAACCATTTCCGCAAGG+TGG + chr8_1:63218451-63218470 None:intergenic 45.0%
ACCTTGCGGAAATGGTTCTT+AGG - chr8_1:63218450-63218469 Msa1206260:intron 45.0%
CCTTGCGGAAATGGTTCTTA+GGG - chr8_1:63218451-63218470 Msa1206260:intron 45.0%
!! TGGTTCTTAGGGAAGCATTC+TGG - chr8_1:63218462-63218481 Msa1206260:intron 45.0%
GACATTACTGCTCCTACTAC+AGG - chr8_1:63218484-63218503 Msa1206260:intron 45.0%
TTACTGCTCCTACTACAGGT+AGG - chr8_1:63218488-63218507 Msa1206260:intron 45.0%
CTCCTACTACAGGTAGGATA+TGG - chr8_1:63218494-63218513 Msa1206260:intron 45.0%
TCTTTGTCTCGTTCAGCTGA+TGG - chr8_1:63218597-63218616 Msa1206260:intron 45.0%
CTTTGTCTCGTTCAGCTGAT+GGG - chr8_1:63218598-63218617 Msa1206260:intron 45.0%
! GCTGATGGGTAATCTGTTTC+TGG - chr8_1:63218612-63218631 Msa1206260:intron 45.0%
!! TCTGTTTCTGGTGCTTTCCT+TGG - chr8_1:63218624-63218643 Msa1206260:intron 45.0%
!! CTGTTTCTGGTGCTTTCCTT+GGG - chr8_1:63218625-63218644 Msa1206260:intron 45.0%
! CTTTCCTTGGGTTTGGAGTT+GGG - chr8_1:63218637-63218656 Msa1206260:intron 45.0%
! TTTCCTTGGGTTTGGAGTTG+GGG - chr8_1:63218638-63218657 Msa1206260:intron 45.0%
AGGACACATCTTGGATCTCA+TGG - chr8_1:63219191-63219210 Msa1206260:CDS 45.0%
! TCATGGTTCTGCAATCTCAG+AGG - chr8_1:63219208-63219227 Msa1206260:CDS 45.0%
AAGCAAAGGAATGGCTGCTA+TGG - chr8_1:63219669-63219688 Msa1206260:CDS 45.0%
GTCCAGAGCAGTAAACTCTT+GGG + chr8_1:63219815-63219834 None:intergenic 45.0%
TGTCCAGAGCAGTAAACTCT+TGG + chr8_1:63219816-63219835 None:intergenic 45.0%
TATCCTCGGTCCAAGTATCA+AGG - chr8_1:63219918-63219937 Msa1206260:intron 45.0%
! GTGGGTTATAAACTGCTCTC+TGG - chr8_1:63220216-63220235 Msa1206260:intron 45.0%
AGAAACTGCCATTCCACTTG+AGG + chr8_1:63220542-63220561 None:intergenic 45.0%
TGTGCGATAGAGAAAGACCA+TGG + chr8_1:63220729-63220748 None:intergenic 45.0%
! GGCTACGTTCCAAGAGTTTT+TGG - chr8_1:63221054-63221073 Msa1206260:CDS 45.0%
AACTTCACAAGCCATGAAGC+TGG - chr8_1:63221082-63221101 Msa1206260:CDS 45.0%
TTCTGCCTCCAACAAATCGG+AGG - chr8_1:63217691-63217710 Msa1206260:three_prime_UTR 50.0%
!! TCGATCCTCCGATTTGTTGG+AGG + chr8_1:63217699-63217718 None:intergenic 50.0%
TTGATGGGACGCGAAGTTGA+AGG + chr8_1:63217767-63217786 None:intergenic 50.0%
TCAACTTCGCGTCCCATCAA+TGG - chr8_1:63217767-63217786 Msa1206260:exon 50.0%
TAGACTGGATATCCTCACCC+GGG - chr8_1:63218148-63218167 Msa1206260:intron 50.0%
ACTTTACAACTTCGAGGCCC+CGG + chr8_1:63218169-63218188 None:intergenic 50.0%
GTAAATTAGGGAGGAGGGGT+GGG - chr8_1:63218311-63218330 Msa1206260:intron 50.0%
TTGTTGTGTGATCGATCGGG+AGG - chr8_1:63218359-63218378 Msa1206260:intron 50.0%
TCAAGACCACCTTGCGGAAA+TGG - chr8_1:63218442-63218461 Msa1206260:intron 50.0%
CCCTAAGAACCATTTCCGCA+AGG + chr8_1:63218454-63218473 None:intergenic 50.0%
ATATGGAACCTACGCTCAGC+TGG - chr8_1:63218511-63218530 Msa1206260:intron 50.0%
ACGTCCACACAAGCCTCTAT+CGG + chr8_1:63218539-63218558 None:intergenic 50.0%
AGGCTTGTGTGGACGTTCTT+TGG - chr8_1:63218543-63218562 Msa1206260:intron 50.0%
GGCTTGTGTGGACGTTCTTT+GGG - chr8_1:63218544-63218563 Msa1206260:intron 50.0%
GCTTGTGTGGACGTTCTTTG+GGG - chr8_1:63218545-63218564 Msa1206260:intron 50.0%
CTTGTGTGGACGTTCTTTGG+GGG - chr8_1:63218546-63218565 Msa1206260:intron 50.0%
! GACGTTCTTTGGGGGATGTA+TGG - chr8_1:63218554-63218573 Msa1206260:intron 50.0%
TTTGGGGGATGTATGGCCTT+GGG - chr8_1:63218561-63218580 Msa1206260:intron 50.0%
TCTGGTGCTTTCCTTGGGTT+TGG - chr8_1:63218630-63218649 Msa1206260:intron 50.0%
! GCTTTCCTTGGGTTTGGAGT+TGG - chr8_1:63218636-63218655 Msa1206260:intron 50.0%
! TTCCTTGGGTTTGGAGTTGG+GGG - chr8_1:63218639-63218658 Msa1206260:intron 50.0%
GAGTTTAGAGGGGAATCCCA+GGG + chr8_1:63218756-63218775 None:intergenic 50.0%
AGAGTTTAGAGGGGAATCCC+AGG + chr8_1:63218757-63218776 None:intergenic 50.0%
!! CATTTATGCGTTGGCTGCAG+AGG - chr8_1:63219120-63219139 Msa1206260:intron 50.0%
AGTGAAGAGTCGGATGTGAG+TGG - chr8_1:63219157-63219176 Msa1206260:intron 50.0%
!! TCGGATGTGAGTGGTTCTGA+TGG - chr8_1:63219166-63219185 Msa1206260:intron 50.0%
!! TGTGAGTGGTTCTGATGGAG+AGG - chr8_1:63219171-63219190 Msa1206260:intron 50.0%
CTGATGGAGAGGACACATCT+TGG - chr8_1:63219182-63219201 Msa1206260:CDS 50.0%
CTTGGCTGCTCAATCCACAA+AGG + chr8_1:63219285-63219304 None:intergenic 50.0%
GAAGGAAAGCTCACCATGAG+AGG + chr8_1:63219353-63219372 None:intergenic 50.0%
TCGGCAGCAGAGATGCTTTA+TGG - chr8_1:63219619-63219638 Msa1206260:CDS 50.0%
TGCCCAAGAGTTTACTGCTC+TGG - chr8_1:63219810-63219829 Msa1206260:intron 50.0%
GACTGACCAACTGGAAGACA+GGG + chr8_1:63219840-63219859 None:intergenic 50.0%
CTGTCTTCCAGTTGGTCAGT+CGG - chr8_1:63219839-63219858 Msa1206260:intron 50.0%
TTGGTCAGTCGGACATTCCT+AGG - chr8_1:63219850-63219869 Msa1206260:intron 50.0%
TGCATATGCATTATGGGGGC+AGG - chr8_1:63220385-63220404 Msa1206260:intron 50.0%
GCATATGCATTATGGGGGCA+GGG - chr8_1:63220386-63220405 Msa1206260:intron 50.0%
GTACTCCTTGCAGCATTCAG+CGG - chr8_1:63221165-63221184 Msa1206260:CDS 50.0%
TTGATCCGCTGAATGCTGCA+AGG + chr8_1:63221173-63221192 None:intergenic 50.0%
TTCTGCCTCCAACAAATCGG+AGG - chr8_1:63217691-63217710 Msa1206260:three_prime_UTR 50.0%
!! TCGATCCTCCGATTTGTTGG+AGG + chr8_1:63217699-63217718 None:intergenic 50.0%
TTGATGGGACGCGAAGTTGA+AGG + chr8_1:63217767-63217786 None:intergenic 50.0%
TCAACTTCGCGTCCCATCAA+TGG - chr8_1:63217767-63217786 Msa1206260:exon 50.0%
TAGACTGGATATCCTCACCC+GGG - chr8_1:63218148-63218167 Msa1206260:intron 50.0%
ACTTTACAACTTCGAGGCCC+CGG + chr8_1:63218169-63218188 None:intergenic 50.0%
GTAAATTAGGGAGGAGGGGT+GGG - chr8_1:63218311-63218330 Msa1206260:intron 50.0%
TTGTTGTGTGATCGATCGGG+AGG - chr8_1:63218359-63218378 Msa1206260:intron 50.0%
TCAAGACCACCTTGCGGAAA+TGG - chr8_1:63218442-63218461 Msa1206260:intron 50.0%
CCCTAAGAACCATTTCCGCA+AGG + chr8_1:63218454-63218473 None:intergenic 50.0%
ATATGGAACCTACGCTCAGC+TGG - chr8_1:63218511-63218530 Msa1206260:intron 50.0%
ACGTCCACACAAGCCTCTAT+CGG + chr8_1:63218539-63218558 None:intergenic 50.0%
AGGCTTGTGTGGACGTTCTT+TGG - chr8_1:63218543-63218562 Msa1206260:intron 50.0%
GGCTTGTGTGGACGTTCTTT+GGG - chr8_1:63218544-63218563 Msa1206260:intron 50.0%
GCTTGTGTGGACGTTCTTTG+GGG - chr8_1:63218545-63218564 Msa1206260:intron 50.0%
CTTGTGTGGACGTTCTTTGG+GGG - chr8_1:63218546-63218565 Msa1206260:intron 50.0%
! GACGTTCTTTGGGGGATGTA+TGG - chr8_1:63218554-63218573 Msa1206260:intron 50.0%
TTTGGGGGATGTATGGCCTT+GGG - chr8_1:63218561-63218580 Msa1206260:intron 50.0%
TCTGGTGCTTTCCTTGGGTT+TGG - chr8_1:63218630-63218649 Msa1206260:intron 50.0%
! GCTTTCCTTGGGTTTGGAGT+TGG - chr8_1:63218636-63218655 Msa1206260:intron 50.0%
! TTCCTTGGGTTTGGAGTTGG+GGG - chr8_1:63218639-63218658 Msa1206260:intron 50.0%
GAGTTTAGAGGGGAATCCCA+GGG + chr8_1:63218756-63218775 None:intergenic 50.0%
AGAGTTTAGAGGGGAATCCC+AGG + chr8_1:63218757-63218776 None:intergenic 50.0%
!! CATTTATGCGTTGGCTGCAG+AGG - chr8_1:63219120-63219139 Msa1206260:intron 50.0%
AGTGAAGAGTCGGATGTGAG+TGG - chr8_1:63219157-63219176 Msa1206260:intron 50.0%
!! TCGGATGTGAGTGGTTCTGA+TGG - chr8_1:63219166-63219185 Msa1206260:intron 50.0%
!! TGTGAGTGGTTCTGATGGAG+AGG - chr8_1:63219171-63219190 Msa1206260:intron 50.0%
CTGATGGAGAGGACACATCT+TGG - chr8_1:63219182-63219201 Msa1206260:CDS 50.0%
CTTGGCTGCTCAATCCACAA+AGG + chr8_1:63219285-63219304 None:intergenic 50.0%
GAAGGAAAGCTCACCATGAG+AGG + chr8_1:63219353-63219372 None:intergenic 50.0%
TCGGCAGCAGAGATGCTTTA+TGG - chr8_1:63219619-63219638 Msa1206260:CDS 50.0%
TGCCCAAGAGTTTACTGCTC+TGG - chr8_1:63219810-63219829 Msa1206260:intron 50.0%
GACTGACCAACTGGAAGACA+GGG + chr8_1:63219840-63219859 None:intergenic 50.0%
CTGTCTTCCAGTTGGTCAGT+CGG - chr8_1:63219839-63219858 Msa1206260:intron 50.0%
TTGGTCAGTCGGACATTCCT+AGG - chr8_1:63219850-63219869 Msa1206260:intron 50.0%
TGCATATGCATTATGGGGGC+AGG - chr8_1:63220385-63220404 Msa1206260:intron 50.0%
GCATATGCATTATGGGGGCA+GGG - chr8_1:63220386-63220405 Msa1206260:intron 50.0%
GTACTCCTTGCAGCATTCAG+CGG - chr8_1:63221165-63221184 Msa1206260:CDS 50.0%
TTGATCCGCTGAATGCTGCA+AGG + chr8_1:63221173-63221192 None:intergenic 50.0%
AGACTGGATATCCTCACCCG+GGG - chr8_1:63218149-63218168 Msa1206260:intron 55.0%
CTTTACAACTTCGAGGCCCC+GGG + chr8_1:63218168-63218187 None:intergenic 55.0%
GGTAAATTAGGGAGGAGGGG+TGG - chr8_1:63218310-63218329 Msa1206260:intron 55.0%
!!! GGGTGGGTTAGGTTGGCTTT+TGG - chr8_1:63218327-63218346 Msa1206260:intron 55.0%
TGTGATCGATCGGGAGGTCT+TGG - chr8_1:63218365-63218384 Msa1206260:intron 55.0%
! CTTTGGGGGATGTATGGCCT+TGG - chr8_1:63218560-63218579 Msa1206260:intron 55.0%
! TTGGGGGATGTATGGCCTTG+GGG - chr8_1:63218562-63218581 Msa1206260:intron 55.0%
! TATGGCCTTGGGGGCTGATT+GGG - chr8_1:63218572-63218591 Msa1206260:intron 55.0%
AACCCCCAACTCCAAACCCA+AGG + chr8_1:63218644-63218663 None:intergenic 55.0%
! TGGGTTTGGAGTTGGGGGTT+TGG - chr8_1:63218644-63218663 Msa1206260:intron 55.0%
GGACAACCCTGTCTTCCAGT+TGG - chr8_1:63219831-63219850 Msa1206260:intron 55.0%
CGACTGACCAACTGGAAGAC+AGG + chr8_1:63219841-63219860 None:intergenic 55.0%
GGAATGTCCGACTGACCAAC+TGG + chr8_1:63219849-63219868 None:intergenic 55.0%
CTGCCTTGATACTTGGACCG+AGG + chr8_1:63219924-63219943 None:intergenic 55.0%
AAGCCGCAGAAACCAGCTCA+GGG - chr8_1:63221033-63221052 Msa1206260:CDS 55.0%
! TAGCCCTGAGCTGGTTTCTG+CGG + chr8_1:63221039-63221058 None:intergenic 55.0%
AGACTGGATATCCTCACCCG+GGG - chr8_1:63218149-63218168 Msa1206260:intron 55.0%
CTTTACAACTTCGAGGCCCC+GGG + chr8_1:63218168-63218187 None:intergenic 55.0%
GGTAAATTAGGGAGGAGGGG+TGG - chr8_1:63218310-63218329 Msa1206260:intron 55.0%
!!! GGGTGGGTTAGGTTGGCTTT+TGG - chr8_1:63218327-63218346 Msa1206260:intron 55.0%
TGTGATCGATCGGGAGGTCT+TGG - chr8_1:63218365-63218384 Msa1206260:intron 55.0%
! CTTTGGGGGATGTATGGCCT+TGG - chr8_1:63218560-63218579 Msa1206260:intron 55.0%
! TTGGGGGATGTATGGCCTTG+GGG - chr8_1:63218562-63218581 Msa1206260:intron 55.0%
! TATGGCCTTGGGGGCTGATT+GGG - chr8_1:63218572-63218591 Msa1206260:intron 55.0%
AACCCCCAACTCCAAACCCA+AGG + chr8_1:63218644-63218663 None:intergenic 55.0%
! TGGGTTTGGAGTTGGGGGTT+TGG - chr8_1:63218644-63218663 Msa1206260:intron 55.0%
GGACAACCCTGTCTTCCAGT+TGG - chr8_1:63219831-63219850 Msa1206260:intron 55.0%
CGACTGACCAACTGGAAGAC+AGG + chr8_1:63219841-63219860 None:intergenic 55.0%
GGAATGTCCGACTGACCAAC+TGG + chr8_1:63219849-63219868 None:intergenic 55.0%
CTGCCTTGATACTTGGACCG+AGG + chr8_1:63219924-63219943 None:intergenic 55.0%
AAGCCGCAGAAACCAGCTCA+GGG - chr8_1:63221033-63221052 Msa1206260:CDS 55.0%
! TAGCCCTGAGCTGGTTTCTG+CGG + chr8_1:63221039-63221058 None:intergenic 55.0%
! TTAGGGAGGAGGGGTGGGTT+AGG - chr8_1:63218316-63218335 Msa1206260:intron 60.0%
!! TATCGGTGCCAGCTGAGCGT+AGG + chr8_1:63218522-63218541 None:intergenic 60.0%
!! GGCACCGATAGAGGCTTGTG+TGG - chr8_1:63218532-63218551 Msa1206260:intron 60.0%
! TGGGGGATGTATGGCCTTGG+GGG - chr8_1:63218563-63218582 Msa1206260:intron 60.0%
! GTATGGCCTTGGGGGCTGAT+TGG - chr8_1:63218571-63218590 Msa1206260:intron 60.0%
AGACACCCAATCAGCCCCCA+AGG + chr8_1:63218580-63218599 None:intergenic 60.0%
! GGGGGTTTGGCAGCTTGTTC+TGG - chr8_1:63218657-63218676 Msa1206260:intron 60.0%
GAAGCCGCAGAAACCAGCTC+AGG - chr8_1:63221032-63221051 Msa1206260:CDS 60.0%
CTTGGAACGTAGCCCTGAGC+TGG + chr8_1:63221048-63221067 None:intergenic 60.0%
! TTAGGGAGGAGGGGTGGGTT+AGG - chr8_1:63218316-63218335 Msa1206260:intron 60.0%
!! TATCGGTGCCAGCTGAGCGT+AGG + chr8_1:63218522-63218541 None:intergenic 60.0%
!! GGCACCGATAGAGGCTTGTG+TGG - chr8_1:63218532-63218551 Msa1206260:intron 60.0%
! TGGGGGATGTATGGCCTTGG+GGG - chr8_1:63218563-63218582 Msa1206260:intron 60.0%
! GTATGGCCTTGGGGGCTGAT+TGG - chr8_1:63218571-63218590 Msa1206260:intron 60.0%
AGACACCCAATCAGCCCCCA+AGG + chr8_1:63218580-63218599 None:intergenic 60.0%
! GGGGGTTTGGCAGCTTGTTC+TGG - chr8_1:63218657-63218676 Msa1206260:intron 60.0%
GAAGCCGCAGAAACCAGCTC+AGG - chr8_1:63221032-63221051 Msa1206260:CDS 60.0%
CTTGGAACGTAGCCCTGAGC+TGG + chr8_1:63221048-63221067 None:intergenic 60.0%
!! GGAGGAGGGGTGGGTTAGGT+TGG - chr8_1:63218320-63218339 Msa1206260:intron 65.0%
!! CGCTCAGCTGGCACCGATAG+AGG - chr8_1:63218523-63218542 Msa1206260:intron 65.0%
!! GGAGGAGGGGTGGGTTAGGT+TGG - chr8_1:63218320-63218339 Msa1206260:intron 65.0%
!! CGCTCAGCTGGCACCGATAG+AGG - chr8_1:63218523-63218542 Msa1206260:intron 65.0%
CAACTTCGAGGCCCCGGGTG+AGG + chr8_1:63218163-63218182 None:intergenic 70.0%
GGGGGCAGGGCTGATGATCC+AGG - chr8_1:63220399-63220418 Msa1206260:intron 70.0%
CAACTTCGAGGCCCCGGGTG+AGG + chr8_1:63218163-63218182 None:intergenic 70.0%
GGGGGCAGGGCTGATGATCC+AGG - chr8_1:63220399-63220418 Msa1206260:intron 70.0%
Chromosome Type Strat End Strand Name
chr8_1 gene 63217378 63221491 63217378 ID=Msa1206260;Name=Msa1206260
chr8_1 mRNA 63217378 63221491 63217378 ID=Msa1206260-mRNA-1;Parent=Msa1206260;Name=Msa1206260-mRNA-1;_AED=0.06;_eAED=0.06;_QI=293|1|1|1|1|1|5|393|274
chr8_1 exon 63217378 63217901 63217378 ID=Msa1206260-mRNA-1:exon:20483;Parent=Msa1206260-mRNA-1
chr8_1 exon 63218927 63219092 63218927 ID=Msa1206260-mRNA-1:exon:20482;Parent=Msa1206260-mRNA-1
chr8_1 exon 63219179 63219288 63219179 ID=Msa1206260-mRNA-1:exon:20481;Parent=Msa1206260-mRNA-1
chr8_1 exon 63219511 63219729 63219511 ID=Msa1206260-mRNA-1:exon:20480;Parent=Msa1206260-mRNA-1
chr8_1 exon 63221000 63221491 63221000 ID=Msa1206260-mRNA-1:exon:20479;Parent=Msa1206260-mRNA-1
chr8_1 five_prime_UTR 63221199 63221491 63221199 ID=Msa1206260-mRNA-1:five_prime_utr;Parent=Msa1206260-mRNA-1
chr8_1 CDS 63221000 63221198 63221000 ID=Msa1206260-mRNA-1:cds;Parent=Msa1206260-mRNA-1
chr8_1 CDS 63219511 63219729 63219511 ID=Msa1206260-mRNA-1:cds;Parent=Msa1206260-mRNA-1
chr8_1 CDS 63219179 63219288 63219179 ID=Msa1206260-mRNA-1:cds;Parent=Msa1206260-mRNA-1
chr8_1 CDS 63218927 63219092 63218927 ID=Msa1206260-mRNA-1:cds;Parent=Msa1206260-mRNA-1
chr8_1 CDS 63217771 63217901 63217771 ID=Msa1206260-mRNA-1:cds;Parent=Msa1206260-mRNA-1
chr8_1 three_prime_UTR 63217378 63217770 63217378 ID=Msa1206260-mRNA-1:three_prime_utr;Parent=Msa1206260-mRNA-1
Gene Sequence

>Msa1206260

ATGTACAAAGGTCGTGGTGGTTCTGCCTCCAACAAATCGGAGGATCGAAAGCGAATCAACGATGTTCTCGATAAGCAGCTTGAACGATCTTCTCCTTCAACTTCGCGTCCCATCAATGGCAAAACCAACAAAGAGAGAGAAACCAATACCATCAAGGATCCCCTTCTTCAACGATCCTCCAAAACTGCCAATATTTCTGAGGAGTCTGAAACAGACAGTGAAGAGTCGGATGTGAGTGGTTCTGATGGAGAGGACACATCTTGGATCTCATGGTTCTGCAATCTCAGAGGAAATGAGTTCTTTTGTGAGGTTGATGATGATTACATCCAAGATGACTTCAACCTTTGTGGATTGAGCAGCCAAGTGCCTTACTATGATTATGCTCTTGATTTGATTTTGGATGTTGAATCCTCTCATGGTGATATGTTCACAGAGGAACAAAACGAGTTAATTGAATCGGCAGCAGAGATGCTTTATGGTATGATTCATGCGCGTTACATATTGACAAGCAAAGGAATGGCTGCTATGCTTGACAAGTACAAGAACTATGACTTTGGTAGATGCCCAAGAGTTTACTGCTCTGGACAACCCTGTCTTCCAGTTGGTCAGTCGGACATTCCTAGGTCAAGTACTGTGAAAATATATTGCCCTAGGTGTGAAGATCTTTATTATCCTCGGTCCAAGTATCAAGGCAACATTGATGGAGCTTATTTTGGAACAACATTTCCACACCTCTTCTTGATGACATATGGACAACTGAAGCCGCAGAAACCAGCTCAGGGCTACGTTCCAAGAGTTTTTGGGTTCAAACTTCACAAGCCATGA
Protein sequence

>Msa1206260

MYKGRGGSASNKSEDRKRINDVLDKQLERSSPSTSRPINGKTNKERETNTIKDPLLQRSSKTANISEESETDSEESDVSGSDGEDTSWISWFCNLRGNEFFCEVDDDYIQDDFNLCGLSSQVPYYDYALDLILDVESSHGDMFTEEQNELIESAAEMLYGMIHARYILTSKGMAAMLDKYKNYDFGRCPRVYCSGQPCLPVGQSDIPRSSTVKIYCPRCEDLYYPRSKYQGNIDGAYFGTTFPHLFLMTYGQLKPQKPAQGYVPRVFGFKLHKP*