Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1331810 | G7JV80 | 99.038 | 312 | 3 | 0 | 1 | 312 | 1 | 312 | 0.0 | 647 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0038350 | Msa1331810 | 0.806802 | 6.892501e-50 | -8.615850e-47 |
| Msa0719490 | Msa1331810 | 0.826100 | 3.264018e-54 | -8.615850e-47 |
| Msa1331810 | Msa1371080 | 0.800734 | 1.254370e-48 | -8.615850e-47 |
| Msa0980440 | Msa1331810 | -0.801282 | 9.691710e-49 | -8.615850e-47 |
| Msa0342200 | Msa1331810 | -0.811512 | 6.745865e-51 | -8.615850e-47 |
| Msa0968320 | Msa1331810 | 0.808181 | 3.513653e-50 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1331810 | MtrunA17_Chr4g0063131 | 99.038 | 312 | 3 | 0 | 1 | 312 | 1 | 312 | 0.0 | 647 |
| Msa1331810 | MtrunA17_Chr3g0124551 | 39.873 | 316 | 124 | 9 | 48 | 312 | 25 | 325 | 3.35e-62 | 200 |
| Msa1331810 | MtrunA17_Chr2g0334241 | 34.496 | 258 | 99 | 7 | 55 | 311 | 57 | 245 | 4.78e-39 | 137 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1331810 | AT1G11020.1 | 79.128 | 321 | 57 | 6 | 1 | 312 | 2 | 321 | 1.95e-172 | 481 |
| Msa1331810 | AT2G22120.1 | 41.000 | 300 | 123 | 7 | 57 | 312 | 35 | 324 | 3.09e-61 | 198 |
| Msa1331810 | AT2G22120.2 | 41.000 | 300 | 123 | 7 | 57 | 312 | 35 | 324 | 5.75e-61 | 198 |
| Msa1331810 | AT1G50440.3 | 36.559 | 279 | 103 | 8 | 38 | 311 | 40 | 249 | 1.79e-43 | 150 |
| Msa1331810 | AT1G50440.1 | 36.559 | 279 | 103 | 8 | 38 | 311 | 40 | 249 | 1.79e-43 | 150 |
| Msa1331810 | AT1G50440.2 | 36.559 | 279 | 103 | 8 | 38 | 311 | 40 | 249 | 1.79e-43 | 150 |
| Msa1331810 | AT1G50440.4 | 42.778 | 180 | 86 | 7 | 38 | 210 | 40 | 209 | 8.02e-36 | 129 |
| Msa1331810 | AT1G50440.5 | 43.396 | 159 | 75 | 5 | 38 | 191 | 40 | 188 | 1.67e-34 | 125 |
Find 122 sgRNAs with CRISPR-Local
Find 332 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| GTTGTCATCTTTGCAATTCT+TGG | 0.166518 | 8_4:+51484637 | Msa1331810:CDS |
| GCAATTCTTGGTGTAGCTTA+TGG | 0.190997 | 8_4:+51484649 | Msa1331810:CDS |
| GTGGCCTTCTTTGTACTAAT+TGG | 0.220798 | 8_4:+51484469 | Msa1331810:CDS |
| ATAAATCCAAAACAGTATTT+TGG | 0.232506 | 8_4:+51480722 | Msa1331810:five_prime_UTR |
| AAAATGGTATCTTAATTCTT+AGG | 0.243356 | 8_4:-51480772 | None:intergenic |
| TGGAAATTCTAATGAGATTA+AGG | 0.258591 | 8_4:+51481169 | Msa1331810:CDS |
| TTAATCATTAAATATAATTA+AGG | 0.262854 | 8_4:+51480882 | Msa1331810:five_prime_UTR |
| GTTCTGACAACCAGCCATTC+TGG | 0.266007 | 8_4:-51484539 | None:intergenic |
| TTTAGGCGACTTTCATGTTC+AGG | 0.279690 | 8_4:-51484926 | None:intergenic |
| AAGATGGAATTGGGCTTTGC+AGG | 0.284313 | 8_4:-51483037 | None:intergenic |
| TTTCAACTCTAAGATGGAAT+TGG | 0.295983 | 8_4:-51483047 | None:intergenic |
| GAACGGTGATTCATTATGTT+AGG | 0.297785 | 8_4:+51481044 | Msa1331810:exon |
| TTCCAGGTGATTGCTGCTAT+TGG | 0.304918 | 8_4:+51483664 | Msa1331810:intron |
| TTACCAATACAATAATAAAA+TGG | 0.334184 | 8_4:-51483775 | None:intergenic |
| GATGACCAAGGATTAGAAAA+AGG | 0.336577 | 8_4:+51485256 | Msa1331810:three_prime_UTR |
| TATATTTAATGATTAATTAG+AGG | 0.362716 | 8_4:-51480875 | None:intergenic |
| GGGAAGAGCAATGCAGTATT+AGG | 0.375957 | 8_4:-51484501 | None:intergenic |
| CTCATCTTGATGAGCGAGTA+AGG | 0.378550 | 8_4:-51481120 | None:intergenic |
| TTCTGACAACCAGCCATTCT+GGG | 0.381237 | 8_4:-51484538 | None:intergenic |
| CTCGAATCCGATTCTGATCC+AGG | 0.385009 | 8_4:+51481239 | Msa1331810:CDS |
| AAGGTGCCAAAATACTGTTT+TGG | 0.398217 | 8_4:-51480728 | None:intergenic |
| GGATTGCTTTCCTGCATCAA+TGG | 0.405434 | 8_4:+51484585 | Msa1331810:CDS |
| ATACAATAATAAAATGGTAT+AGG | 0.411488 | 8_4:-51483769 | None:intergenic |
| AACGGTGATTCATTATGTTA+GGG | 0.420944 | 8_4:+51481045 | Msa1331810:exon |
| AGAGGGAAACACGGAGATAA+TGG | 0.421325 | 8_4:-51480857 | None:intergenic |
| TGGACAAAGATGGGAACTTC+AGG | 0.427837 | 8_4:+51483704 | Msa1331810:CDS |
| CCTTTCAGAAACCATTGAAT+TGG | 0.428736 | 8_4:-51485286 | None:intergenic |
| CATTAGAATTTCCAGTTCCA+TGG | 0.431744 | 8_4:-51481160 | None:intergenic |
| TTCATGTTCAGGGTCTAACT+TGG | 0.434216 | 8_4:-51484915 | None:intergenic |
| TTCAACTCTAAGATGGAATT+GGG | 0.434765 | 8_4:-51483046 | None:intergenic |
| ATCGTTCATGTCTTGATCAC+TGG | 0.440696 | 8_4:+51482883 | Msa1331810:CDS |
| TACCTTTGTAAGCTCCCTCT+TGG | 0.443922 | 8_4:-51484731 | None:intergenic |
| TTCAGGAACTCATTTGATGA+TGG | 0.444767 | 8_4:+51483721 | Msa1331810:CDS |
| TAGGTGTGTCTTGTATGAAA+TGG | 0.449065 | 8_4:-51480753 | None:intergenic |
| TTCTGGGGTCGTTGCTATTG+AGG | 0.453877 | 8_4:-51484522 | None:intergenic |
| GATAATGGTGTTGATTATTG+AGG | 0.457815 | 8_4:-51480842 | None:intergenic |
| GATTTGGAGTATACAGAATC+TGG | 0.458518 | 8_4:-51485132 | None:intergenic |
| TTAGGCGACTTTCATGTTCA+GGG | 0.460342 | 8_4:-51484925 | None:intergenic |
| AAGGATCTCTACCAATTCAA+TGG | 0.460919 | 8_4:+51485275 | Msa1331810:three_prime_UTR |
| GTCAGAACTGTTGCTACGGA+TGG | 0.465548 | 8_4:+51484554 | Msa1331810:CDS |
| GATGACGATTCCCATGGAAC+TGG | 0.467624 | 8_4:+51481149 | Msa1331810:CDS |
| GCGTACATCATGGACAAAGA+TGG | 0.468462 | 8_4:+51483694 | Msa1331810:CDS |
| TCTGGGGTCGTTGCTATTGA+GGG | 0.470587 | 8_4:-51484521 | None:intergenic |
| CCATGGCAATTCAAAGGATC+TGG | 0.473979 | 8_4:+51484686 | Msa1331810:CDS |
| CATACGTTTCAACTCTAAGA+TGG | 0.484110 | 8_4:-51483053 | None:intergenic |
| CAACCTTGTTTGCTAGAGCA+TGG | 0.487448 | 8_4:+51485060 | Msa1331810:three_prime_UTR |
| CAGGTGATTGCTGCTATTGG+TGG | 0.489695 | 8_4:+51483667 | Msa1331810:intron |
| CAAGTTGTTGCTTTATGTGA+CGG | 0.490924 | 8_4:+51485017 | Msa1331810:three_prime_UTR |
| AGCAACGACCCCAGAATGGC+TGG | 0.496626 | 8_4:+51484529 | Msa1331810:CDS |
| GCAGTTAATTGTCAACTCAA+TGG | 0.500606 | 8_4:+51485183 | Msa1331810:three_prime_UTR |
| ATATTTAATGATTAATTAGA+GGG | 0.500886 | 8_4:-51480874 | None:intergenic |
| TTGCTACGGATGGGGCATCT+TGG | 0.502565 | 8_4:+51484564 | Msa1331810:CDS |
| CATTTGATGATGGGTGGGAT+AGG | 0.505244 | 8_4:+51483731 | Msa1331810:CDS |
| GCTCCCTCTTGGTGAGGATG+TGG | 0.508941 | 8_4:-51484720 | None:intergenic |
| TGGGTTCCTTTGCACATGCA+TGG | 0.509336 | 8_4:-51482849 | None:intergenic |
| AGGTGTGTCTTGTATGAAAT+GGG | 0.509385 | 8_4:-51480752 | None:intergenic |
| TCAGAACTGTTGCTACGGAT+GGG | 0.510104 | 8_4:+51484555 | Msa1331810:CDS |
| AAATTCACCTGGATCAGAAT+CGG | 0.512269 | 8_4:-51481246 | None:intergenic |
| TCATGTTCAGGGTCTAACTT+GGG | 0.512896 | 8_4:-51484914 | None:intergenic |
| CTGGATCAGAATCGGATTCG+AGG | 0.513657 | 8_4:-51481238 | None:intergenic |
| ATTAGAATTTCCAGTTCCAT+GGG | 0.517157 | 8_4:-51481159 | None:intergenic |
| CCGATGTCATGTCATATGTT+CGG | 0.528940 | 8_4:+51485234 | Msa1331810:three_prime_UTR |
| GATCAAGAAGATATTGAAGC+TGG | 0.531127 | 8_4:+51481191 | Msa1331810:CDS |
| TCTTAGAGTTGAAACGTATG+AGG | 0.533806 | 8_4:+51483056 | Msa1331810:CDS |
| TGAACGATGAACAAACTGTT+GGG | 0.535187 | 8_4:-51482868 | None:intergenic |
| CCAGATCCTTTGAATTGCCA+TGG | 0.535835 | 8_4:-51484686 | None:intergenic |
| AACCTTGTTTGCTAGAGCAT+GGG | 0.537837 | 8_4:+51485061 | Msa1331810:three_prime_UTR |
| AAATCCAATTAGTACAAAGA+AGG | 0.538670 | 8_4:-51484473 | None:intergenic |
| CGTACATCATGGACAAAGAT+GGG | 0.540985 | 8_4:+51483695 | Msa1331810:CDS |
| TCAGGAACTCATTTGATGAT+GGG | 0.541405 | 8_4:+51483722 | Msa1331810:CDS |
| AAGCATGCCTCCATTGATGC+AGG | 0.542092 | 8_4:-51484595 | None:intergenic |
| GGAACTCATTTGATGATGGG+TGG | 0.548532 | 8_4:+51483725 | Msa1331810:CDS |
| TGATCACTGGCGCTCAGTGA+AGG | 0.550899 | 8_4:+51482896 | Msa1331810:CDS |
| CCAATTCAATGGTTTCTGAA+AGG | 0.551083 | 8_4:+51485286 | Msa1331810:three_prime_UTR |
| ATGAACGATGAACAAACTGT+TGG | 0.553389 | 8_4:-51482869 | None:intergenic |
| TGTTCAGGGTCTAACTTGGG+TGG | 0.553938 | 8_4:-51484911 | None:intergenic |
| CAGAACTGTTGCTACGGATG+GGG | 0.555141 | 8_4:+51484556 | Msa1331810:CDS |
| AGTAAGGGATCGGAATCGCT+AGG | 0.559877 | 8_4:-51481104 | None:intergenic |
| TTGTAAGCTCCCTCTTGGTG+AGG | 0.561935 | 8_4:-51484726 | None:intergenic |
| TGTTTGCTAGAGCATGGGAA+TGG | 0.562348 | 8_4:+51485066 | Msa1331810:three_prime_UTR |
| CATCCACCATGGCAATTCAA+AGG | 0.563779 | 8_4:+51484680 | Msa1331810:CDS |
| AAACGTATGAGGACAACTCT+TGG | 0.564367 | 8_4:+51483067 | Msa1331810:CDS |
| GCAGGTGGTGCAGTGTGAAA+AGG | 0.572415 | 8_4:-51483019 | None:intergenic |
| TCTGAAAGGTGAAATAAACA+TGG | 0.581230 | 8_4:+51485300 | Msa1331810:three_prime_UTR |
| GAACTCATTTGATGATGGGT+GGG | 0.581649 | 8_4:+51483726 | Msa1331810:CDS |
| CAATAGCAACGACCCCAGAA+TGG | 0.582599 | 8_4:+51484525 | Msa1331810:CDS |
| TTCCCATGCTCTAGCAAACA+AGG | 0.585595 | 8_4:-51485063 | None:intergenic |
| TCGAGGCAAATTCGACAACA+AGG | 0.591089 | 8_4:-51481221 | None:intergenic |
| CAATTCAAAGGATCTGGCAG+AGG | 0.591310 | 8_4:+51484692 | Msa1331810:CDS |
| CGAGGTGACGAATCAATACA+AGG | 0.591836 | 8_4:-51485211 | None:intergenic |
| GGTTGTCAGAACTGTTGCTA+CGG | 0.595437 | 8_4:+51484550 | Msa1331810:CDS |
| TTGCTTTCCTGCATCAATGG+AGG | 0.600020 | 8_4:+51484588 | Msa1331810:CDS |
| CTGAAAGGTGAAATAAACAT+GGG | 0.603115 | 8_4:+51485301 | Msa1331810:three_prime_UTR |
| TATACATGTTCCAGGAGTGG+TGG | 0.605675 | 8_4:+51484450 | Msa1331810:intron |
| ATTCTTTGATCGAAATCGAA+CGG | 0.619359 | 8_4:+51481027 | Msa1331810:five_prime_UTR |
| GTTGAAGATGACGATTCCCA+TGG | 0.619822 | 8_4:+51481143 | Msa1331810:CDS |
| GTTCAGGGTCTAACTTGGGT+GGG | 0.621160 | 8_4:-51484910 | None:intergenic |
| GTAAGGGATCGGAATCGCTA+GGG | 0.621501 | 8_4:-51481103 | None:intergenic |
| TCATCTTGATGAGCGAGTAA+GGG | 0.622033 | 8_4:-51481119 | None:intergenic |
| ATATCTCCATGCATGTGCAA+AGG | 0.626524 | 8_4:+51482843 | Msa1331810:CDS |
| TTGATGAGCGAGTAAGGGAT+CGG | 0.627082 | 8_4:-51481114 | None:intergenic |
| AGGAATGTCGATGGTAACAA+TGG | 0.627432 | 8_4:-51480822 | None:intergenic |
| TGGCTTTCTTGCATCCACCA+TGG | 0.628147 | 8_4:+51484669 | Msa1331810:CDS |
| CACCAAGAGGGAGCTTACAA+AGG | 0.629716 | 8_4:+51484729 | Msa1331810:CDS |
| TGGAGTATACAGAATCTGGT+AGG | 0.630664 | 8_4:-51485128 | None:intergenic |
| TTTACAGGAATACGTAGTAG+AGG | 0.634021 | 8_4:+51484868 | Msa1331810:intron |
| ACGGTGATTCATTATGTTAG+GGG | 0.642635 | 8_4:+51481046 | Msa1331810:exon |
| GATCCTTTGAATTGCCATGG+TGG | 0.648218 | 8_4:-51484683 | None:intergenic |
| ATGGAATTGGGCTTTGCAGG+TGG | 0.652674 | 8_4:-51483034 | None:intergenic |
| TCTGACAACCAGCCATTCTG+GGG | 0.663825 | 8_4:-51484537 | None:intergenic |
| TGATTAATTAGAGGGAAACA+CGG | 0.665188 | 8_4:-51480866 | None:intergenic |
| CTTACTCGCTCATCAAGATG+AGG | 0.666209 | 8_4:+51481121 | Msa1331810:CDS |
| TGTCTTGTATGAAATGGGAA+AGG | 0.679803 | 8_4:-51480747 | None:intergenic |
| GTCATATGTTCGGATGACCA+AGG | 0.683616 | 8_4:+51485244 | Msa1331810:three_prime_UTR |
| TGATTATTGAGGAATGTCGA+TGG | 0.690144 | 8_4:-51480831 | None:intergenic |
| ATTACCACATCCTCACCAAG+AGG | 0.692109 | 8_4:+51484716 | Msa1331810:CDS |
| TACGTAGTAGAGGATCTACA+AGG | 0.693561 | 8_4:+51484878 | Msa1331810:CDS |
| GGTGGGATAGGATATTGTCA+AGG | 0.695784 | 8_4:+51483743 | Msa1331810:CDS |
| CGAGGCAAATTCGACAACAA+GGG | 0.696362 | 8_4:-51481220 | None:intergenic |
| TTACCACATCCTCACCAAGA+GGG | 0.705208 | 8_4:+51484717 | Msa1331810:CDS |
| CCGAACATATGACATGACAT+CGG | 0.709801 | 8_4:-51485234 | None:intergenic |
| CATATGACATGACATCGGCG+AGG | 0.775165 | 8_4:-51485229 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | ATATTTAATGATTAATTAGA+GGG | - | chr8_4:51480877-51480896 | None:intergenic | 10.0% |
| !! | TATATTTAATGATTAATTAG+AGG | - | chr8_4:51480878-51480897 | None:intergenic | 10.0% |
| !! | TAAAAATTTATTTAATAACG+CGG | - | chr8_4:51480910-51480929 | None:intergenic | 10.0% |
| !! | ATTTATTTATATATAACTCT+TGG | - | chr8_4:51482569-51482588 | None:intergenic | 10.0% |
| !!! | TTTTTTATAAAATTTGATTC+CGG | + | chr8_4:51483548-51483567 | Msa1331810:intron | 10.0% |
| !! | TAAGTAAATAATAATGAATA+AGG | - | chr8_4:51483642-51483661 | None:intergenic | 10.0% |
| !! | CCTCAAAAAAAAAAAAAAAA+TGG | - | chr8_4:51480791-51480810 | None:intergenic | 15.0% |
| !!! | CCATTTTTTTTTTTTTTTTG+AGG | + | chr8_4:51480788-51480807 | Msa1331810:five_prime_UTR | 15.0% |
| !!! | AATTTTTAAATTGTGAATTG+TGG | + | chr8_4:51481308-51481327 | Msa1331810:intron | 15.0% |
| !!! | ATTTTTAAATTGTGAATTGT+GGG | + | chr8_4:51481309-51481328 | Msa1331810:intron | 15.0% |
| !!! | AAATTAAGAATTTTTTGGTT+AGG | + | chr8_4:51481369-51481388 | Msa1331810:intron | 15.0% |
| !!! | TATTTTAGTTTTATTGCTTT+TGG | + | chr8_4:51481604-51481623 | Msa1331810:intron | 15.0% |
| !!! | TTTAATTCTAAGTTGATAAA+AGG | + | chr8_4:51481739-51481758 | Msa1331810:intron | 15.0% |
| !! | ATTTATCTAATTAATTCAAC+AGG | - | chr8_4:51482724-51482743 | None:intergenic | 15.0% |
| !!! | TTATTATTTACTTATTTTCC+AGG | + | chr8_4:51483648-51483667 | Msa1331810:intron | 15.0% |
| !! | ATACAATAATAAAATGGTAT+AGG | - | chr8_4:51483772-51483791 | None:intergenic | 15.0% |
| !!! | ATACCATTTTATTATTGTAT+TGG | + | chr8_4:51483772-51483791 | Msa1331810:CDS | 15.0% |
| !! | TTACCAATACAATAATAAAA+TGG | - | chr8_4:51483778-51483797 | None:intergenic | 15.0% |
| !! | TATCAAATGATTTAGAAAAT+AGG | - | chr8_4:51484799-51484818 | None:intergenic | 15.0% |
| !!! | ATAAATCCAAAACAGTATTT+TGG | + | chr8_4:51480722-51480741 | Msa1331810:five_prime_UTR | 20.0% |
| !! | AAAATGGTATCTTAATTCTT+AGG | - | chr8_4:51480775-51480794 | None:intergenic | 20.0% |
| !! | AGACGAATGAATAATAAAAA+TGG | - | chr8_4:51480951-51480970 | None:intergenic | 20.0% |
| !! | TCCAAAAATTCCAAAAAAAT+TGG | - | chr8_4:51481289-51481308 | None:intergenic | 20.0% |
| !! | TAATAATCCAAATCACATAA+AGG | - | chr8_4:51481350-51481369 | None:intergenic | 20.0% |
| !! | ATTAGATTAAGGATTTGATA+AGG | + | chr8_4:51481392-51481411 | Msa1331810:intron | 20.0% |
| !! | AAATATTTAGCACATAGAAA+TGG | - | chr8_4:51481849-51481868 | None:intergenic | 20.0% |
| !! | ATTTCTATGTGCTAAATATT+TGG | + | chr8_4:51481848-51481867 | Msa1331810:intron | 20.0% |
| !!! | CATAACATCATCTTTTATAT+AGG | - | chr8_4:51482164-51482183 | None:intergenic | 20.0% |
| !! | GCAAATATTATTATTAAGCA+CGG | - | chr8_4:51482272-51482291 | None:intergenic | 20.0% |
| !! | CTGATATCATCTTAAAATTT+GGG | - | chr8_4:51482432-51482451 | None:intergenic | 20.0% |
| !! | ACTGATATCATCTTAAAATT+TGG | - | chr8_4:51482433-51482452 | None:intergenic | 20.0% |
| !! | ATATATAACTCTTGGAATTT+GGG | - | chr8_4:51482561-51482580 | None:intergenic | 20.0% |
| !! | TATATATAACTCTTGGAATT+TGG | - | chr8_4:51482562-51482581 | None:intergenic | 20.0% |
| !! | GATAGTAGAAAAAAACAATT+CGG | + | chr8_4:51482751-51482770 | Msa1331810:intron | 20.0% |
| !!! | GCTTTATTCAAATCAAATTT+AGG | - | chr8_4:51484055-51484074 | None:intergenic | 20.0% |
| !!! | TTTGTACTAATTGGATTTTT+TGG | + | chr8_4:51484478-51484497 | Msa1331810:CDS | 20.0% |
| !!! | TCTTTGTTGTAAATATTTAC+AGG | + | chr8_4:51484853-51484872 | Msa1331810:intron | 20.0% |
| !!! | GGGTTAAATTTTTAGTTATT+TGG | + | chr8_4:51485321-51485340 | Msa1331810:three_prime_UTR | 20.0% |
| ! | TGGAAATTCTAATGAGATTA+AGG | + | chr8_4:51481169-51481188 | Msa1331810:CDS | 25.0% |
| !!! | CAGTTTTATGCCAATTTTTT+TGG | + | chr8_4:51481276-51481295 | Msa1331810:intron | 25.0% |
| !!! | GCCAATTTTTTTGGAATTTT+TGG | + | chr8_4:51481285-51481304 | Msa1331810:intron | 25.0% |
| !!! | TTTTTTGCCTTTATGTGATT+TGG | + | chr8_4:51481340-51481359 | Msa1331810:intron | 25.0% |
| !!! | TTTTGGTTAGGATTAGATTA+AGG | + | chr8_4:51481381-51481400 | Msa1331810:intron | 25.0% |
| ! | TTCATATCTTAAGAACAACA+GGG | - | chr8_4:51481540-51481559 | None:intergenic | 25.0% |
| ! | ATTCATATCTTAAGAACAAC+AGG | - | chr8_4:51481541-51481560 | None:intergenic | 25.0% |
| ! | TTCAGCATAAATCAATATTG+TGG | + | chr8_4:51481909-51481928 | Msa1331810:intron | 25.0% |
| !!! | TGTAGTTTGTTAACAACTAA+AGG | - | chr8_4:51482106-51482125 | None:intergenic | 25.0% |
| !!! | TCACAATTTGCTTTTAAGTT+TGG | + | chr8_4:51482358-51482377 | Msa1331810:intron | 25.0% |
| !!! | CACAATTTGCTTTTAAGTTT+GGG | + | chr8_4:51482359-51482378 | Msa1331810:intron | 25.0% |
| ! | TATCATCTTAAAATTTGGGT+TGG | - | chr8_4:51482428-51482447 | None:intergenic | 25.0% |
| ! | TCTATCTCAACCTATAAAAT+CGG | - | chr8_4:51482533-51482552 | None:intergenic | 25.0% |
| ! | CCAAACAAAAAATAGGTTTA+GGG | - | chr8_4:51482804-51482823 | None:intergenic | 25.0% |
| ! | ACCAAACAAAAAATAGGTTT+AGG | - | chr8_4:51482805-51482824 | None:intergenic | 25.0% |
| ! | TGTGAAACCAAACAAAAAAT+AGG | - | chr8_4:51482811-51482830 | None:intergenic | 25.0% |
| !!! | TTTTAACTGCTAGTTTTTAC+TGG | + | chr8_4:51482938-51482957 | Msa1331810:intron | 25.0% |
| ! | CTATGAAGCACAAAATAAAT+AGG | - | chr8_4:51482989-51483008 | None:intergenic | 25.0% |
| !!! | CTATTTATTTTGTGCTTCAT+AGG | + | chr8_4:51482987-51483006 | Msa1331810:intron | 25.0% |
| !! | AATAAAGTTCAGACTTTTTG+TGG | + | chr8_4:51483095-51483114 | Msa1331810:CDS | 25.0% |
| ! | CTTGATCATTCAATATGAAA+TGG | - | chr8_4:51483182-51483201 | None:intergenic | 25.0% |
| !!! | ATTGGTAATTTTAGACCTTA+AGG | + | chr8_4:51483497-51483516 | Msa1331810:intron | 25.0% |
| !! | ACCTTAAGGAATTCTTTTTA+TGG | + | chr8_4:51483511-51483530 | Msa1331810:intron | 25.0% |
| ! | ACCATAAAAAGAATTCCTTA+AGG | - | chr8_4:51483515-51483534 | None:intergenic | 25.0% |
| ! | CCTAATTTCAGAAAATTTCA+CGG | - | chr8_4:51483876-51483895 | None:intergenic | 25.0% |
| !!! | CGTGAAATTTTCTGAAATTA+GGG | + | chr8_4:51483874-51483893 | Msa1331810:intron | 25.0% |
| !!! | GTGAAATTTTCTGAAATTAG+GGG | + | chr8_4:51483875-51483894 | Msa1331810:intron | 25.0% |
| !! | TTGATTTGAATAAAGCCAAA+CGG | + | chr8_4:51484059-51484078 | Msa1331810:intron | 25.0% |
| ! | TAACTTTCTGTTCTAACATT+TGG | - | chr8_4:51484110-51484129 | None:intergenic | 25.0% |
| !!! | ACATCTAAGTTTTCTTGTTT+TGG | + | chr8_4:51484170-51484189 | Msa1331810:intron | 25.0% |
| !!! | CATCTAAGTTTTCTTGTTTT+GGG | + | chr8_4:51484171-51484190 | Msa1331810:intron | 25.0% |
| !!! | ATCTAAGTTTTCTTGTTTTG+GGG | + | chr8_4:51484172-51484191 | Msa1331810:intron | 25.0% |
| ! | ATTTAATAACCATGCGAATA+AGG | - | chr8_4:51484266-51484285 | None:intergenic | 25.0% |
| ! | TTCAAACAATTATCACAACA+CGG | - | chr8_4:51484381-51484400 | None:intergenic | 25.0% |
| ! | AAATCCAATTAGTACAAAGA+AGG | - | chr8_4:51484476-51484495 | None:intergenic | 25.0% |
| ! | GAAAATAGGAAAAACATTTC+AGG | - | chr8_4:51484785-51484804 | None:intergenic | 25.0% |
| !! | ACAAAAGCTTAAGCATTTTT+AGG | - | chr8_4:51484946-51484965 | None:intergenic | 25.0% |
| !! | GATAATGGTGTTGATTATTG+AGG | - | chr8_4:51480845-51480864 | None:intergenic | 30.0% |
| TGATTAATTAGAGGGAAACA+CGG | - | chr8_4:51480869-51480888 | None:intergenic | 30.0% | |
| !!! | TTCTCGTGTTCTTTTGTTTT+AGG | + | chr8_4:51480976-51480995 | Msa1331810:intron | 30.0% |
| !!! | TCTCGTGTTCTTTTGTTTTA+GGG | + | chr8_4:51480977-51480996 | Msa1331810:intron | 30.0% |
| !!! | TTTGTTTTAGGGTTTGTGTT+AGG | + | chr8_4:51480988-51481007 | Msa1331810:intron | 30.0% |
| !!! | TTGTTTTAGGGTTTGTGTTA+GGG | + | chr8_4:51480989-51481008 | Msa1331810:intron | 30.0% |
| ATTCTTTGATCGAAATCGAA+CGG | + | chr8_4:51481027-51481046 | Msa1331810:five_prime_UTR | 30.0% | |
| AACGGTGATTCATTATGTTA+GGG | + | chr8_4:51481045-51481064 | Msa1331810:exon | 30.0% | |
| ATTAGAATTTCCAGTTCCAT+GGG | - | chr8_4:51481162-51481181 | None:intergenic | 30.0% | |
| TAAGGCAGAGTTTAAATTGA+AGG | + | chr8_4:51481410-51481429 | Msa1331810:intron | 30.0% | |
| AAGGCAGAGTTTAAATTGAA+GGG | + | chr8_4:51481411-51481430 | Msa1331810:intron | 30.0% | |
| TGTTCTTAAGATATGAATCG+TGG | + | chr8_4:51481543-51481562 | Msa1331810:intron | 30.0% | |
| TAAGATATGAATCGTGGATT+TGG | + | chr8_4:51481549-51481568 | Msa1331810:intron | 30.0% | |
| !! | TAATGTTGATGGCATAAACT+AGG | + | chr8_4:51481769-51481788 | Msa1331810:intron | 30.0% |
| ! | AAACACATTTAGAACATGAC+TGG | - | chr8_4:51482501-51482520 | None:intergenic | 30.0% |
| ! | CCAAAACTTTTGTATAGTGA+GGG | - | chr8_4:51482596-51482615 | None:intergenic | 30.0% |
| ! | CCTCACTATACAAAAGTTTT+GGG | + | chr8_4:51482594-51482613 | Msa1331810:intron | 30.0% |
| !!! | CCCTAAACCTATTTTTTGTT+TGG | + | chr8_4:51482801-51482820 | Msa1331810:intron | 30.0% |
| !!! | TTTTTTGTTTGGTTTCACAG+AGG | + | chr8_4:51482812-51482831 | Msa1331810:intron | 30.0% |
| !! | TTATTTTGTGCTTCATAGGA+AGG | + | chr8_4:51482991-51483010 | Msa1331810:intron | 30.0% |
| !! | TTCAACTCTAAGATGGAATT+GGG | - | chr8_4:51483049-51483068 | None:intergenic | 30.0% |
| !! | TTTCAACTCTAAGATGGAAT+TGG | - | chr8_4:51483050-51483069 | None:intergenic | 30.0% |
| TCTTTCTAAGCCATACTTAT+GGG | + | chr8_4:51483239-51483258 | Msa1331810:intron | 30.0% | |
| TTCTATATCTAACTGTTCTG+AGG | - | chr8_4:51483427-51483446 | None:intergenic | 30.0% | |
| ACAGTTAGATATAGAAGTTG+TGG | + | chr8_4:51483431-51483450 | Msa1331810:intron | 30.0% | |
| ! | GTCTAAAATTACCAATACTG+TGG | - | chr8_4:51483493-51483512 | None:intergenic | 30.0% |
| !!! | GAGTTGTTTGTTTTAACCAA+TGG | + | chr8_4:51483816-51483835 | Msa1331810:intron | 30.0% |
| !!! | CCGTGAAATTTTCTGAAATT+AGG | + | chr8_4:51483873-51483892 | Msa1331810:intron | 30.0% |
| TATCTGTATCTCAGATGATA+TGG | - | chr8_4:51483912-51483931 | None:intergenic | 30.0% | |
| CATTCTCTCCAATATTCTTT+CGG | - | chr8_4:51483984-51484003 | None:intergenic | 30.0% | |
| AAGAATATTGGAGAGAATGT+TGG | + | chr8_4:51483985-51484004 | Msa1331810:intron | 30.0% | |
| GTTAATATGTTACTACCGTT+TGG | - | chr8_4:51484077-51484096 | None:intergenic | 30.0% | |
| !!! | TCTAAGTTTTCTTGTTTTGG+GGG | + | chr8_4:51484173-51484192 | Msa1331810:intron | 30.0% |
| TCTATATCATGTTCATTCAG+TGG | + | chr8_4:51484322-51484341 | Msa1331810:intron | 30.0% | |
| ACAGTTTATATACATGTTCC+AGG | + | chr8_4:51484442-51484461 | Msa1331810:intron | 30.0% | |
| GACAACAAAAACAACTACAA+GGG | - | chr8_4:51484623-51484642 | None:intergenic | 30.0% | |
| TGACAACAAAAACAACTACA+AGG | - | chr8_4:51484624-51484643 | None:intergenic | 30.0% | |
| !!! | CATTTTTTCTGACACAGATT+TGG | - | chr8_4:51485151-51485170 | None:intergenic | 30.0% |
| AATCTGTGTCAGAAAAAATG+AGG | + | chr8_4:51485151-51485170 | Msa1331810:three_prime_UTR | 30.0% | |
| TCTGAAAGGTGAAATAAACA+TGG | + | chr8_4:51485300-51485319 | Msa1331810:three_prime_UTR | 30.0% | |
| CTGAAAGGTGAAATAAACAT+GGG | + | chr8_4:51485301-51485320 | Msa1331810:three_prime_UTR | 30.0% | |
| !! | AAGGTGCCAAAATACTGTTT+TGG | - | chr8_4:51480731-51480750 | None:intergenic | 35.0% |
| TGTCTTGTATGAAATGGGAA+AGG | - | chr8_4:51480750-51480769 | None:intergenic | 35.0% | |
| AGGTGTGTCTTGTATGAAAT+GGG | - | chr8_4:51480755-51480774 | None:intergenic | 35.0% | |
| TAGGTGTGTCTTGTATGAAA+TGG | - | chr8_4:51480756-51480775 | None:intergenic | 35.0% | |
| TGATTATTGAGGAATGTCGA+TGG | - | chr8_4:51480834-51480853 | None:intergenic | 35.0% | |
| GAACGGTGATTCATTATGTT+AGG | + | chr8_4:51481044-51481063 | Msa1331810:exon | 35.0% | |
| ACGGTGATTCATTATGTTAG+GGG | + | chr8_4:51481046-51481065 | Msa1331810:exon | 35.0% | |
| CATTAGAATTTCCAGTTCCA+TGG | - | chr8_4:51481163-51481182 | None:intergenic | 35.0% | |
| GATCAAGAAGATATTGAAGC+TGG | + | chr8_4:51481191-51481210 | Msa1331810:CDS | 35.0% | |
| AAATTCACCTGGATCAGAAT+CGG | - | chr8_4:51481249-51481268 | None:intergenic | 35.0% | |
| ACTGAAAACGAAAATTCACC+TGG | - | chr8_4:51481260-51481279 | None:intergenic | 35.0% | |
| !! | AGTGTTCTGAAGATATGAAC+CGG | + | chr8_4:51481450-51481469 | Msa1331810:intron | 35.0% |
| !! | GACATTTTGATCAGATACTG+TGG | + | chr8_4:51481495-51481514 | Msa1331810:intron | 35.0% |
| ! | TTGATCAGATACTGTGGTTT+TGG | + | chr8_4:51481501-51481520 | Msa1331810:intron | 35.0% |
| TATCTAATGGAAGGTGAAAG+TGG | + | chr8_4:51481663-51481682 | Msa1331810:intron | 35.0% | |
| TTTATGCCATCAACATTACG+AGG | - | chr8_4:51481767-51481786 | None:intergenic | 35.0% | |
| TTCTGTGTTATGCACATTGA+AGG | + | chr8_4:51481952-51481971 | Msa1331810:intron | 35.0% | |
| AGCAAGTTAAACGAGAAATG+AGG | - | chr8_4:51482013-51482032 | None:intergenic | 35.0% | |
| ! | CACTAACTCTAGAAGAGAAA+AGG | + | chr8_4:51482059-51482078 | Msa1331810:intron | 35.0% |
| TGTTAACAACTAAAGGCTAG+AGG | - | chr8_4:51482099-51482118 | None:intergenic | 35.0% | |
| ! | GGAGGAAAAAAGAGTACAAA+AGG | - | chr8_4:51482221-51482240 | None:intergenic | 35.0% |
| !!! | TACTCTTTTTTCCTCCTATG+CGG | + | chr8_4:51482225-51482244 | Msa1331810:intron | 35.0% |
| ! | ACCTTGCAAGATGATTTTGT+AGG | + | chr8_4:51482390-51482409 | Msa1331810:intron | 35.0% |
| ! | CCTTGCAAGATGATTTTGTA+GGG | + | chr8_4:51482391-51482410 | Msa1331810:intron | 35.0% |
| ! | TGATTTTGTAGGGTTGAGTT+AGG | + | chr8_4:51482401-51482420 | Msa1331810:intron | 35.0% |
| !!! | TAGAGTTCCACCGATTTTAT+AGG | + | chr8_4:51482520-51482539 | Msa1331810:intron | 35.0% |
| ATCTCAACCTATAAAATCGG+TGG | - | chr8_4:51482530-51482549 | None:intergenic | 35.0% | |
| ! | TAACTCTTGGAATTTGGGTT+GGG | - | chr8_4:51482556-51482575 | None:intergenic | 35.0% |
| ATAACTCTTGGAATTTGGGT+TGG | - | chr8_4:51482557-51482576 | None:intergenic | 35.0% | |
| ! | CCCTCACTATACAAAAGTTT+TGG | + | chr8_4:51482593-51482612 | Msa1331810:intron | 35.0% |
| ! | CCCAAAACTTTTGTATAGTG+AGG | - | chr8_4:51482597-51482616 | None:intergenic | 35.0% |
| TACCAGCATATCCTATTACA+CGG | + | chr8_4:51482691-51482710 | Msa1331810:intron | 35.0% | |
| GTAGAAAAAAACAATTCGGC+TGG | + | chr8_4:51482755-51482774 | Msa1331810:intron | 35.0% | |
| TGAACGATGAACAAACTGTT+GGG | - | chr8_4:51482871-51482890 | None:intergenic | 35.0% | |
| ATGAACGATGAACAAACTGT+TGG | - | chr8_4:51482872-51482891 | None:intergenic | 35.0% | |
| ! | CATACGTTTCAACTCTAAGA+TGG | - | chr8_4:51483056-51483075 | None:intergenic | 35.0% |
| TCTTAGAGTTGAAACGTATG+AGG | + | chr8_4:51483056-51483075 | Msa1331810:CDS | 35.0% | |
| !!! | GGATGTTTTCCTTGTTTTTC+TGG | + | chr8_4:51483122-51483141 | Msa1331810:CDS | 35.0% |
| TTTGTACAGCCAGAAAAACA+AGG | - | chr8_4:51483134-51483153 | None:intergenic | 35.0% | |
| CTCTTTCTAAGCCATACTTA+TGG | + | chr8_4:51483238-51483257 | Msa1331810:intron | 35.0% | |
| AAATAACACGCCCATAAGTA+TGG | - | chr8_4:51483252-51483271 | None:intergenic | 35.0% | |
| ! | AAAAGAGCTCTAATGTAGGA+TGG | - | chr8_4:51483287-51483306 | None:intergenic | 35.0% |
| ! | CTGAAAAAGAGCTCTAATGT+AGG | - | chr8_4:51483291-51483310 | None:intergenic | 35.0% |
| GTTTAGCAATCACACAAGAT+TGG | - | chr8_4:51483327-51483346 | None:intergenic | 35.0% | |
| AATTACCAATACTGTGGCAT+TGG | - | chr8_4:51483487-51483506 | None:intergenic | 35.0% | |
| AACAACTAGACAGATCAAAC+CGG | - | chr8_4:51483570-51483589 | None:intergenic | 35.0% | |
| GTCATATAGTCTAATGTTCG+CGG | + | chr8_4:51483602-51483621 | Msa1331810:intron | 35.0% | |
| TCATATAGTCTAATGTTCGC+GGG | + | chr8_4:51483603-51483622 | Msa1331810:intron | 35.0% | |
| TTCAGGAACTCATTTGATGA+TGG | + | chr8_4:51483721-51483740 | Msa1331810:CDS | 35.0% | |
| ! | TCAGGAACTCATTTGATGAT+GGG | + | chr8_4:51483722-51483741 | Msa1331810:CDS | 35.0% |
| GTTAAAACAAACAACTCCAG+TGG | - | chr8_4:51483813-51483832 | None:intergenic | 35.0% | |
| TCAGATGATATGGAGAACTA+TGG | - | chr8_4:51483902-51483921 | None:intergenic | 35.0% | |
| TGCATAAAACATGAAGGACA+AGG | - | chr8_4:51483958-51483977 | None:intergenic | 35.0% | |
| ATGCAAGTCCGAAAGAATAT+TGG | + | chr8_4:51483973-51483992 | Msa1331810:intron | 35.0% | |
| TCTCCAACATGACTATAGTT+AGG | - | chr8_4:51484011-51484030 | None:intergenic | 35.0% | |
| AGTCATGTTGGAGAGAAAAT+AGG | + | chr8_4:51484017-51484036 | Msa1331810:intron | 35.0% | |
| TTATATACATGTTCCAGGAG+TGG | + | chr8_4:51484447-51484466 | Msa1331810:intron | 35.0% | |
| GTTGTCATCTTTGCAATTCT+TGG | + | chr8_4:51484637-51484656 | Msa1331810:CDS | 35.0% | |
| TTTACAGGAATACGTAGTAG+AGG | + | chr8_4:51484868-51484887 | Msa1331810:intron | 35.0% | |
| ! | GCTTAAGCTTTTGTGATTCA+CGG | + | chr8_4:51484952-51484971 | Msa1331810:exon | 35.0% |
| !! | CAAGTTGTTGCTTTATGTGA+CGG | + | chr8_4:51485017-51485036 | Msa1331810:three_prime_UTR | 35.0% |
| ! | GATTTGGAGTATACAGAATC+TGG | - | chr8_4:51485135-51485154 | None:intergenic | 35.0% |
| GCAGTTAATTGTCAACTCAA+TGG | + | chr8_4:51485183-51485202 | Msa1331810:three_prime_UTR | 35.0% | |
| GATGACCAAGGATTAGAAAA+AGG | + | chr8_4:51485256-51485275 | Msa1331810:three_prime_UTR | 35.0% | |
| ! | GAGATCCTTTTTCTAATCCT+TGG | - | chr8_4:51485264-51485283 | None:intergenic | 35.0% |
| AAGGATCTCTACCAATTCAA+TGG | + | chr8_4:51485275-51485294 | Msa1331810:three_prime_UTR | 35.0% | |
| CCTTTCAGAAACCATTGAAT+TGG | - | chr8_4:51485289-51485308 | None:intergenic | 35.0% | |
| CCAATTCAATGGTTTCTGAA+AGG | + | chr8_4:51485286-51485305 | Msa1331810:three_prime_UTR | 35.0% | |
| AGGAATGTCGATGGTAACAA+TGG | - | chr8_4:51480825-51480844 | None:intergenic | 40.0% | |
| !!! | TCGCTAGGGTTTTGTTGAAT+CGG | - | chr8_4:51481092-51481111 | None:intergenic | 40.0% |
| TCATCTTGATGAGCGAGTAA+GGG | - | chr8_4:51481122-51481141 | None:intergenic | 40.0% | |
| ! | TTCTGAAGATATGAACCGGT+TGG | + | chr8_4:51481454-51481473 | Msa1331810:intron | 40.0% |
| TCTGAAGATATGAACCGGTT+GGG | + | chr8_4:51481455-51481474 | Msa1331810:intron | 40.0% | |
| AATCTTGATACCAACCCAAC+CGG | - | chr8_4:51481472-51481491 | None:intergenic | 40.0% | |
| TTGTCACTCGCTGTATCTAA+TGG | + | chr8_4:51481650-51481669 | Msa1331810:intron | 40.0% | |
| GAAGGTGAAAGTGGATAACT+TGG | + | chr8_4:51481672-51481691 | Msa1331810:intron | 40.0% | |
| AAGGAACCTCGTAATGTTGA+TGG | + | chr8_4:51481758-51481777 | Msa1331810:intron | 40.0% | |
| TTAAACGAGAAATGAGGCGA+GGG | - | chr8_4:51482007-51482026 | None:intergenic | 40.0% | |
| TAACAACTAAAGGCTAGAGG+TGG | - | chr8_4:51482096-51482115 | None:intergenic | 40.0% | |
| !!! | ACTCTTTTTTCCTCCTATGC+GGG | + | chr8_4:51482226-51482245 | Msa1331810:intron | 40.0% |
| CCCTACAAAATCATCTTGCA+AGG | - | chr8_4:51482394-51482413 | None:intergenic | 40.0% | |
| ! | CATTTAGAACATGACTGGAG+TGG | - | chr8_4:51482496-51482515 | None:intergenic | 40.0% |
| !!! | AAAAGTTTTGGGTCTGTCAC+TGG | + | chr8_4:51482605-51482624 | Msa1331810:intron | 40.0% |
| CAATTCGGCTGGTATTACAT+TGG | + | chr8_4:51482766-51482785 | Msa1331810:intron | 40.0% | |
| ATATCTCCATGCATGTGCAA+AGG | + | chr8_4:51482843-51482862 | Msa1331810:CDS | 40.0% | |
| ATCGTTCATGTCTTGATCAC+TGG | + | chr8_4:51482883-51482902 | Msa1331810:CDS | 40.0% | |
| AAACGTATGAGGACAACTCT+TGG | + | chr8_4:51483067-51483086 | Msa1331810:CDS | 40.0% | |
| ! | AGTTCAGACTTTTTGTGGCA+AGG | + | chr8_4:51483100-51483119 | Msa1331810:CDS | 40.0% |
| ! | GTTCAGACTTTTTGTGGCAA+GGG | + | chr8_4:51483101-51483120 | Msa1331810:CDS | 40.0% |
| !! | TCTAACTGTTCTGAGGTTCA+TGG | - | chr8_4:51483420-51483439 | None:intergenic | 40.0% |
| TATAGAAGTTGTGGTTGTGC+TGG | + | chr8_4:51483440-51483459 | Msa1331810:intron | 40.0% | |
| CATATAGTCTAATGTTCGCG+GGG | + | chr8_4:51483604-51483623 | Msa1331810:intron | 40.0% | |
| ATATAGTCTAATGTTCGCGG+GGG | + | chr8_4:51483605-51483624 | Msa1331810:intron | 40.0% | |
| CGTACATCATGGACAAAGAT+GGG | + | chr8_4:51483695-51483714 | Msa1331810:CDS | 40.0% | |
| !! | GAACTCATTTGATGATGGGT+GGG | + | chr8_4:51483726-51483745 | Msa1331810:CDS | 40.0% |
| GTAAGTTAACATGTGTCCAC+TGG | + | chr8_4:51483794-51483813 | Msa1331810:intron | 40.0% | |
| AATACCAAGTACACATGCAG+AGG | - | chr8_4:51483850-51483869 | None:intergenic | 40.0% | |
| CGGACTTGCATAAAACATGA+AGG | - | chr8_4:51483964-51483983 | None:intergenic | 40.0% | |
| TGGCCTAACTATAGTCATGT+TGG | + | chr8_4:51484005-51484024 | Msa1331810:intron | 40.0% | |
| !!! | AAGTTTTCTTGTTTTGGGGG+AGG | + | chr8_4:51484176-51484195 | Msa1331810:intron | 40.0% |
| !!! | AGTTTTCTTGTTTTGGGGGA+GGG | + | chr8_4:51484177-51484196 | Msa1331810:intron | 40.0% |
| GGGAGGGGAAAAAATAAATG+TGG | + | chr8_4:51484193-51484212 | Msa1331810:intron | 40.0% | |
| ! | ACTGACTTTCCTTATTCGCA+TGG | + | chr8_4:51484254-51484273 | Msa1331810:intron | 40.0% |
| GTAAGAGATAGAGACGTACA+GGG | - | chr8_4:51484422-51484441 | None:intergenic | 40.0% | |
| TGTAAGAGATAGAGACGTAC+AGG | - | chr8_4:51484423-51484442 | None:intergenic | 40.0% | |
| GTGGCCTTCTTTGTACTAAT+TGG | + | chr8_4:51484469-51484488 | Msa1331810:CDS | 40.0% | |
| ! | GCAATTCTTGGTGTAGCTTA+TGG | + | chr8_4:51484649-51484668 | Msa1331810:CDS | 40.0% |
| TACGTAGTAGAGGATCTACA+AGG | + | chr8_4:51484878-51484897 | Msa1331810:CDS | 40.0% | |
| TCATGTTCAGGGTCTAACTT+GGG | - | chr8_4:51484917-51484936 | None:intergenic | 40.0% | |
| TTCATGTTCAGGGTCTAACT+TGG | - | chr8_4:51484918-51484937 | None:intergenic | 40.0% | |
| TTAGGCGACTTTCATGTTCA+GGG | - | chr8_4:51484928-51484947 | None:intergenic | 40.0% | |
| TTTAGGCGACTTTCATGTTC+AGG | - | chr8_4:51484929-51484948 | None:intergenic | 40.0% | |
| ! | AACCTTGTTTGCTAGAGCAT+GGG | + | chr8_4:51485061-51485080 | Msa1331810:three_prime_UTR | 40.0% |
| TGGAGTATACAGAATCTGGT+AGG | - | chr8_4:51485131-51485150 | None:intergenic | 40.0% | |
| CCGAACATATGACATGACAT+CGG | - | chr8_4:51485237-51485256 | None:intergenic | 40.0% | |
| CCGATGTCATGTCATATGTT+CGG | + | chr8_4:51485234-51485253 | Msa1331810:three_prime_UTR | 40.0% | |
| AGAGGGAAACACGGAGATAA+TGG | - | chr8_4:51480860-51480879 | None:intergenic | 45.0% | |
| !!! | CTAGGGTTTTGTTGAATCGG+TGG | - | chr8_4:51481089-51481108 | None:intergenic | 45.0% |
| TTGATGAGCGAGTAAGGGAT+CGG | - | chr8_4:51481117-51481136 | None:intergenic | 45.0% | |
| CTCATCTTGATGAGCGAGTA+AGG | - | chr8_4:51481123-51481142 | None:intergenic | 45.0% | |
| CTTACTCGCTCATCAAGATG+AGG | + | chr8_4:51481121-51481140 | Msa1331810:CDS | 45.0% | |
| GTTGAAGATGACGATTCCCA+TGG | + | chr8_4:51481143-51481162 | Msa1331810:CDS | 45.0% | |
| CGAGGCAAATTCGACAACAA+GGG | - | chr8_4:51481223-51481242 | None:intergenic | 45.0% | |
| TCGAGGCAAATTCGACAACA+AGG | - | chr8_4:51481224-51481243 | None:intergenic | 45.0% | |
| AAGATATGAACCGGTTGGGT+TGG | + | chr8_4:51481459-51481478 | Msa1331810:intron | 45.0% | |
| CACTCGCTGTATCTAATGGA+AGG | + | chr8_4:51481654-51481673 | Msa1331810:intron | 45.0% | |
| GATGGCATAAACTAGGCTGT+AGG | + | chr8_4:51481776-51481795 | Msa1331810:intron | 45.0% | |
| AAACTAGGCTGTAGGAAAGC+AGG | + | chr8_4:51481784-51481803 | Msa1331810:intron | 45.0% | |
| ACCCATGTTTGCAACTATGC+TGG | + | chr8_4:51481975-51481994 | Msa1331810:intron | 45.0% | |
| GCCAGCATAGTTGCAAACAT+GGG | - | chr8_4:51481979-51481998 | None:intergenic | 45.0% | |
| GTTAAACGAGAAATGAGGCG+AGG | - | chr8_4:51482008-51482027 | None:intergenic | 45.0% | |
| AAGATGCACTTAACCCGCAT+AGG | - | chr8_4:51482242-51482261 | None:intergenic | 45.0% | |
| TCAGTCCATCCAAGATCTGT+TGG | + | chr8_4:51482448-51482467 | Msa1331810:intron | 45.0% | |
| CAGTCCATCCAAGATCTGTT+GGG | + | chr8_4:51482449-51482468 | Msa1331810:intron | 45.0% | |
| TGCCGTGTAATAGGATATGC+TGG | - | chr8_4:51482696-51482715 | None:intergenic | 45.0% | |
| AAGATGGAATTGGGCTTTGC+AGG | - | chr8_4:51483040-51483059 | None:intergenic | 45.0% | |
| AGACACCAATGCCACAGTAT+TGG | + | chr8_4:51483479-51483498 | Msa1331810:intron | 45.0% | |
| TATAGTCTAATGTTCGCGGG+GGG | + | chr8_4:51483606-51483625 | Msa1331810:intron | 45.0% | |
| TTCCAGGTGATTGCTGCTAT+TGG | + | chr8_4:51483664-51483683 | Msa1331810:intron | 45.0% | |
| !! | TGGTGGTTTTGCGTACATCA+TGG | + | chr8_4:51483684-51483703 | Msa1331810:CDS | 45.0% |
| GCGTACATCATGGACAAAGA+TGG | + | chr8_4:51483694-51483713 | Msa1331810:CDS | 45.0% | |
| TGGACAAAGATGGGAACTTC+AGG | + | chr8_4:51483704-51483723 | Msa1331810:CDS | 45.0% | |
| !! | GGAACTCATTTGATGATGGG+TGG | + | chr8_4:51483725-51483744 | Msa1331810:CDS | 45.0% |
| !! | CATTTGATGATGGGTGGGAT+AGG | + | chr8_4:51483731-51483750 | Msa1331810:CDS | 45.0% |
| GGTGGGATAGGATATTGTCA+AGG | + | chr8_4:51483743-51483762 | Msa1331810:CDS | 45.0% | |
| GTACACATGCAGAGGAATCT+CGG | - | chr8_4:51483842-51483861 | None:intergenic | 45.0% | |
| GATTCCTCTGCATGTGTACT+TGG | + | chr8_4:51483843-51483862 | Msa1331810:intron | 45.0% | |
| !!! | GTTTTCTTGTTTTGGGGGAG+GGG | + | chr8_4:51484178-51484197 | Msa1331810:intron | 45.0% |
| TATACATGTTCCAGGAGTGG+TGG | + | chr8_4:51484450-51484469 | Msa1331810:intron | 45.0% | |
| GGGAAGAGCAATGCAGTATT+AGG | - | chr8_4:51484504-51484523 | None:intergenic | 45.0% | |
| TTCTGACAACCAGCCATTCT+GGG | - | chr8_4:51484541-51484560 | None:intergenic | 45.0% | |
| GGTTGTCAGAACTGTTGCTA+CGG | + | chr8_4:51484550-51484569 | Msa1331810:CDS | 45.0% | |
| TCAGAACTGTTGCTACGGAT+GGG | + | chr8_4:51484555-51484574 | Msa1331810:CDS | 45.0% | |
| GGATTGCTTTCCTGCATCAA+TGG | + | chr8_4:51484585-51484604 | Msa1331810:CDS | 45.0% | |
| TTGCTTTCCTGCATCAATGG+AGG | + | chr8_4:51484588-51484607 | Msa1331810:CDS | 45.0% | |
| CATCCACCATGGCAATTCAA+AGG | + | chr8_4:51484680-51484699 | Msa1331810:CDS | 45.0% | |
| GATCCTTTGAATTGCCATGG+TGG | - | chr8_4:51484686-51484705 | None:intergenic | 45.0% | |
| CCAGATCCTTTGAATTGCCA+TGG | - | chr8_4:51484689-51484708 | None:intergenic | 45.0% | |
| CCATGGCAATTCAAAGGATC+TGG | + | chr8_4:51484686-51484705 | Msa1331810:CDS | 45.0% | |
| CAATTCAAAGGATCTGGCAG+AGG | + | chr8_4:51484692-51484711 | Msa1331810:CDS | 45.0% | |
| ATTACCACATCCTCACCAAG+AGG | + | chr8_4:51484716-51484735 | Msa1331810:CDS | 45.0% | |
| TTACCACATCCTCACCAAGA+GGG | + | chr8_4:51484717-51484736 | Msa1331810:CDS | 45.0% | |
| TACCTTTGTAAGCTCCCTCT+TGG | - | chr8_4:51484734-51484753 | None:intergenic | 45.0% | |
| ! | CAACCTTGTTTGCTAGAGCA+TGG | + | chr8_4:51485060-51485079 | Msa1331810:three_prime_UTR | 45.0% |
| TTCCCATGCTCTAGCAAACA+AGG | - | chr8_4:51485066-51485085 | None:intergenic | 45.0% | |
| ! | TGTTTGCTAGAGCATGGGAA+TGG | + | chr8_4:51485066-51485085 | Msa1331810:three_prime_UTR | 45.0% |
| CGAGGTGACGAATCAATACA+AGG | - | chr8_4:51485214-51485233 | None:intergenic | 45.0% | |
| GTCATATGTTCGGATGACCA+AGG | + | chr8_4:51485244-51485263 | Msa1331810:three_prime_UTR | 45.0% | |
| !! | TTAATCATTAAATATAATTA+AGG | + | chr8_4:51480882-51480901 | Msa1331810:five_prime_UTR | 5.0% |
| !!! | TTATTAAATTAAGAATTTTT+TGG | + | chr8_4:51481364-51481383 | Msa1331810:intron | 5.0% |
| !!! | TTTTTTTTTATATATAATTC+TGG | + | chr8_4:51485102-51485121 | Msa1331810:three_prime_UTR | 5.0% |
| !!! | TTTTTTTTATATATAATTCT+GGG | + | chr8_4:51485103-51485122 | Msa1331810:three_prime_UTR | 5.0% |
| !!! | GGGTTTTGTTGAATCGGTGG+AGG | - | chr8_4:51481086-51481105 | None:intergenic | 50.0% |
| GTAAGGGATCGGAATCGCTA+GGG | - | chr8_4:51481106-51481125 | None:intergenic | 50.0% | |
| AGTAAGGGATCGGAATCGCT+AGG | - | chr8_4:51481107-51481126 | None:intergenic | 50.0% | |
| GATGACGATTCCCATGGAAC+TGG | + | chr8_4:51481149-51481168 | Msa1331810:CDS | 50.0% | |
| CTGGATCAGAATCGGATTCG+AGG | - | chr8_4:51481241-51481260 | None:intergenic | 50.0% | |
| CTCGAATCCGATTCTGATCC+AGG | + | chr8_4:51481239-51481258 | Msa1331810:CDS | 50.0% | |
| GGCCAGCATAGTTGCAAACA+TGG | - | chr8_4:51481980-51481999 | None:intergenic | 50.0% | |
| GTTTGCAACTATGCTGGCCA+TGG | + | chr8_4:51481981-51482000 | Msa1331810:intron | 50.0% | |
| ATGCACTTAACCCGCATAGG+AGG | - | chr8_4:51482239-51482258 | None:intergenic | 50.0% | |
| GGCTCAATAGAGGAAGCAAG+TGG | - | chr8_4:51482475-51482494 | None:intergenic | 50.0% | |
| TGACTGGAGTGGCTCAATAG+AGG | - | chr8_4:51482485-51482504 | None:intergenic | 50.0% | |
| CAGGCTATGTGCCGTGTAAT+AGG | - | chr8_4:51482705-51482724 | None:intergenic | 50.0% | |
| TGGGTTCCTTTGCACATGCA+TGG | - | chr8_4:51482852-51482871 | None:intergenic | 50.0% | |
| ATGGAATTGGGCTTTGCAGG+TGG | - | chr8_4:51483037-51483056 | None:intergenic | 50.0% | |
| ! | GTTGTGGTTGTGCTGGTATC+AGG | + | chr8_4:51483447-51483466 | Msa1331810:intron | 50.0% |
| ! | TGGTTGTGCTGGTATCAGGT+TGG | + | chr8_4:51483451-51483470 | Msa1331810:intron | 50.0% |
| !! | GTGCTGGTATCAGGTTGGTA+AGG | + | chr8_4:51483456-51483475 | Msa1331810:intron | 50.0% |
| CACCAATAGCAGCAATCACC+TGG | - | chr8_4:51483669-51483688 | None:intergenic | 50.0% | |
| CAGGTGATTGCTGCTATTGG+TGG | + | chr8_4:51483667-51483686 | Msa1331810:intron | 50.0% | |
| GAGATAGAGACGTACAGGGA+AGG | - | chr8_4:51484418-51484437 | None:intergenic | 50.0% | |
| ! | TCTGGGGTCGTTGCTATTGA+GGG | - | chr8_4:51484524-51484543 | None:intergenic | 50.0% |
| !! | TTCTGGGGTCGTTGCTATTG+AGG | - | chr8_4:51484525-51484544 | None:intergenic | 50.0% |
| CAATAGCAACGACCCCAGAA+TGG | + | chr8_4:51484525-51484544 | Msa1331810:CDS | 50.0% | |
| TCTGACAACCAGCCATTCTG+GGG | - | chr8_4:51484540-51484559 | None:intergenic | 50.0% | |
| GTTCTGACAACCAGCCATTC+TGG | - | chr8_4:51484542-51484561 | None:intergenic | 50.0% | |
| GTCAGAACTGTTGCTACGGA+TGG | + | chr8_4:51484554-51484573 | Msa1331810:CDS | 50.0% | |
| CAGAACTGTTGCTACGGATG+GGG | + | chr8_4:51484556-51484575 | Msa1331810:CDS | 50.0% | |
| AAGCATGCCTCCATTGATGC+AGG | - | chr8_4:51484598-51484617 | None:intergenic | 50.0% | |
| TGGCTTTCTTGCATCCACCA+TGG | + | chr8_4:51484669-51484688 | Msa1331810:CDS | 50.0% | |
| TTGTAAGCTCCCTCTTGGTG+AGG | - | chr8_4:51484729-51484748 | None:intergenic | 50.0% | |
| CACCAAGAGGGAGCTTACAA+AGG | + | chr8_4:51484729-51484748 | Msa1331810:CDS | 50.0% | |
| GTTCAGGGTCTAACTTGGGT+GGG | - | chr8_4:51484913-51484932 | None:intergenic | 50.0% | |
| TGTTCAGGGTCTAACTTGGG+TGG | - | chr8_4:51484914-51484933 | None:intergenic | 50.0% | |
| CATATGACATGACATCGGCG+AGG | - | chr8_4:51485232-51485251 | None:intergenic | 50.0% | |
| GTGGCCCAACAGATCTTGGA+TGG | - | chr8_4:51482456-51482475 | None:intergenic | 55.0% | |
| GCAAGTGGCCCAACAGATCT+TGG | - | chr8_4:51482460-51482479 | None:intergenic | 55.0% | |
| TGATCACTGGCGCTCAGTGA+AGG | + | chr8_4:51482896-51482915 | Msa1331810:CDS | 55.0% | |
| GCAGGTGGTGCAGTGTGAAA+AGG | - | chr8_4:51483022-51483041 | None:intergenic | 55.0% | |
| TGCAGAGGAATCTCGGCCAT+TGG | - | chr8_4:51483835-51483854 | None:intergenic | 55.0% | |
| ACAAAGAAGGCCACCACTCC+TGG | - | chr8_4:51484463-51484482 | None:intergenic | 55.0% | |
| ! | TTGCTACGGATGGGGCATCT+TGG | + | chr8_4:51484564-51484583 | Msa1331810:CDS | 55.0% |
| GAGAAATGAGGCGAGGGCCA+TGG | - | chr8_4:51482001-51482020 | None:intergenic | 60.0% | |
| AGCAACGACCCCAGAATGGC+TGG | + | chr8_4:51484529-51484548 | Msa1331810:CDS | 60.0% | |
| GCTCCCTCTTGGTGAGGATG+TGG | - | chr8_4:51484723-51484742 | None:intergenic | 60.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr8_4 | gene | 51480712 | 51485356 | 51480712 | ID=Msa1331810;Name=Msa1331810 |
| chr8_4 | mRNA | 51480712 | 51485356 | 51480712 | ID=Msa1331810-mRNA-1;Parent=Msa1331810;Name=Msa1331810-mRNA-1;_AED=0.04;_eAED=0.04;_QI=253|1|1|1|0.83|0.71|7|389|312 |
| chr8_4 | exon | 51480712 | 51480903 | 51480712 | ID=Msa1331810-mRNA-1:exon:15187;Parent=Msa1331810-mRNA-1 |
| chr8_4 | exon | 51480998 | 51481260 | 51480998 | ID=Msa1331810-mRNA-1:exon:15188;Parent=Msa1331810-mRNA-1 |
| chr8_4 | exon | 51482832 | 51482917 | 51482832 | ID=Msa1331810-mRNA-1:exon:15189;Parent=Msa1331810-mRNA-1 |
| chr8_4 | exon | 51483009 | 51483155 | 51483009 | ID=Msa1331810-mRNA-1:exon:15190;Parent=Msa1331810-mRNA-1 |
| chr8_4 | exon | 51483670 | 51483793 | 51483670 | ID=Msa1331810-mRNA-1:exon:15191;Parent=Msa1331810-mRNA-1 |
| chr8_4 | exon | 51484464 | 51484750 | 51484464 | ID=Msa1331810-mRNA-1:exon:15192;Parent=Msa1331810-mRNA-1 |
| chr8_4 | exon | 51484875 | 51485356 | 51484875 | ID=Msa1331810-mRNA-1:exon:15193;Parent=Msa1331810-mRNA-1 |
| chr8_4 | five_prime_UTR | 51480712 | 51480903 | 51480712 | ID=Msa1331810-mRNA-1:five_prime_utr;Parent=Msa1331810-mRNA-1 |
| chr8_4 | five_prime_UTR | 51480998 | 51481058 | 51480998 | ID=Msa1331810-mRNA-1:five_prime_utr;Parent=Msa1331810-mRNA-1 |
| chr8_4 | CDS | 51481059 | 51481260 | 51481059 | ID=Msa1331810-mRNA-1:cds;Parent=Msa1331810-mRNA-1 |
| chr8_4 | CDS | 51482832 | 51482917 | 51482832 | ID=Msa1331810-mRNA-1:cds;Parent=Msa1331810-mRNA-1 |
| chr8_4 | CDS | 51483009 | 51483155 | 51483009 | ID=Msa1331810-mRNA-1:cds;Parent=Msa1331810-mRNA-1 |
| chr8_4 | CDS | 51483670 | 51483793 | 51483670 | ID=Msa1331810-mRNA-1:cds;Parent=Msa1331810-mRNA-1 |
| chr8_4 | CDS | 51484464 | 51484750 | 51484464 | ID=Msa1331810-mRNA-1:cds;Parent=Msa1331810-mRNA-1 |
| chr8_4 | CDS | 51484875 | 51484967 | 51484875 | ID=Msa1331810-mRNA-1:cds;Parent=Msa1331810-mRNA-1 |
| chr8_4 | three_prime_UTR | 51484968 | 51485356 | 51484968 | ID=Msa1331810-mRNA-1:three_prime_utr;Parent=Msa1331810-mRNA-1 |
| Gene Sequence |
| Protein sequence |
