Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1337510 | XP_003610159.1 | 91.034 | 580 | 34 | 3 | 1 | 566 | 1 | 576 | 0.0 | 1036 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1337510 | sp|Q96C11|FGGY_HUMAN | 45.961 | 557 | 272 | 8 | 14 | 561 | 12 | 548 | 4.24e-164 | 481 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1337510 | G7JD18 | 91.034 | 580 | 34 | 3 | 1 | 566 | 1 | 576 | 0.0 | 1036 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0615600 | Msa1337510 | 0.803225 | 3.858754e-49 | -8.615850e-47 |
| Msa1265260 | Msa1337510 | 0.893418 | 6.400981e-75 | -8.615850e-47 |
| Msa0380650 | Msa1337510 | 0.814100 | 1.829282e-51 | -8.615850e-47 |
| Msa0430290 | Msa1337510 | 0.816883 | 4.396300e-52 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1337510 | MtrunA17_Chr4g0072731 | 91.034 | 580 | 34 | 3 | 1 | 566 | 1 | 576 | 0.0 | 1036 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1337510 | AT4G30310.2 | 73.822 | 573 | 136 | 4 | 7 | 566 | 8 | 579 | 0.0 | 877 |
| Msa1337510 | AT4G30310.1 | 71.575 | 489 | 119 | 4 | 6 | 483 | 7 | 486 | 0.0 | 726 |
| Msa1337510 | AT4G30310.4 | 73.377 | 462 | 109 | 4 | 118 | 566 | 1 | 461 | 0.0 | 707 |
| Msa1337510 | AT4G30310.3 | 72.826 | 460 | 105 | 4 | 118 | 566 | 1 | 451 | 0.0 | 699 |
Find 179 sgRNAs with CRISPR-Local
Find 556 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| ACCTTTGGTGGTTGCATTTC+TGG | 0.088084 | tig0001526:-158936 | None:intergenic |
| GCTCTTGGGTGCTGCTATTC+TGG | 0.108620 | tig0001526:+164203 | Msa1337510:CDS |
| CCTGGCCATCCTTTGGGTTC+TGG | 0.174434 | tig0001526:+160758 | Msa1337510:CDS |
| CAGGAACATGCTGATATTAT+TGG | 0.193681 | tig0001526:+163015 | Msa1337510:CDS |
| GCCACGGAATATCTTGTATT+TGG | 0.194882 | tig0001526:-165029 | None:intergenic |
| CTTTCCCTTGGAAGAATTAT+AGG | 0.198225 | tig0001526:-164171 | None:intergenic |
| ATCTAACTTTCCAGCTTCTA+TGG | 0.200690 | tig0001526:+159498 | Msa1337510:intron |
| CGCTTTCCCTGGCCATCCTT+TGG | 0.231526 | tig0001526:+160751 | Msa1337510:CDS |
| GAGCAGAACCAAACCTTTAT+AGG | 0.233071 | tig0001526:+162345 | Msa1337510:CDS |
| AATTGTTCATTCCTGGGATT+TGG | 0.236868 | tig0001526:+161282 | Msa1337510:CDS |
| ATTGTTCATTCCTGGGATTT+GGG | 0.242505 | tig0001526:+161283 | Msa1337510:CDS |
| TTTGCACCACAGTTTGTAAA+TGG | 0.263446 | tig0001526:+159713 | Msa1337510:CDS |
| CAGCAATGGTACCAGAATAT+TGG | 0.292707 | tig0001526:+162066 | Msa1337510:intron |
| GAGTGCTACTGGTGCATTAT+TGG | 0.296050 | tig0001526:+162106 | Msa1337510:CDS |
| AGCTGCATTCAGGGCTTTCA+TGG | 0.304897 | tig0001526:-164265 | None:intergenic |
| CATGTTCTTCCTGACTTTCA+TGG | 0.316014 | tig0001526:+162387 | Msa1337510:CDS |
| TGGTCGTGTGATTAGTAAAT+TGG | 0.320215 | tig0001526:+165327 | Msa1337510:three_prime_UTR |
| TATCAAACTAAATTAAATTA+AGG | 0.321340 | tig0001526:-165359 | None:intergenic |
| TTCCGACAGCTCACCTGTTT+CGG | 0.328398 | tig0001526:+158788 | Msa1337510:CDS |
| CGGAGCAAATTGTTCATTCC+TGG | 0.329096 | tig0001526:+161275 | Msa1337510:CDS |
| AAGAAAATTTGCAAGAATCT+TGG | 0.330498 | tig0001526:+159525 | Msa1337510:CDS |
| TTCAGTCAGGGCGCCTATAA+AGG | 0.331186 | tig0001526:-162358 | None:intergenic |
| AATAAAGAAAAGAGAGAGAT+AGG | 0.332239 | tig0001526:-158052 | None:intergenic |
| CTCTTGGGTGCTGCTATTCT+GGG | 0.338717 | tig0001526:+164204 | Msa1337510:CDS |
| GCTTTCCCTGGCCATCCTTT+GGG | 0.344709 | tig0001526:+160752 | Msa1337510:CDS |
| ACACCTGACCAGCTGCATTC+AGG | 0.348731 | tig0001526:-164275 | None:intergenic |
| TGTAGATAGGGTTCTTTGAT+AGG | 0.353694 | tig0001526:-162990 | None:intergenic |
| CAAGAAGAAATGTGATAGTA+TGG | 0.357580 | tig0001526:+158829 | Msa1337510:CDS |
| CAAAGAAATATAATAGCCTT+AGG | 0.362518 | tig0001526:+164238 | Msa1337510:CDS |
| GCTCACCTGTTTCGGTTTCT+CGG | 0.363236 | tig0001526:+158796 | Msa1337510:CDS |
| AAATCAAAAGGAGTTATCTA+TGG | 0.364935 | tig0001526:+162516 | Msa1337510:CDS |
| AGCAATCTTCTACAGATATA+TGG | 0.367313 | tig0001526:+158564 | Msa1337510:intron |
| GATGCTCATGCTGGTGGCGT+GGG | 0.370406 | tig0001526:+161056 | Msa1337510:CDS |
| CATAACCTTGAAAATCAATA+TGG | 0.372762 | tig0001526:-165222 | None:intergenic |
| TGGACCAGCGCGAGCGCTGC+CGG | 0.374993 | tig0001526:-158255 | None:intergenic |
| TGATACAGATTCCCGAGATA+TGG | 0.379808 | tig0001526:+159771 | Msa1337510:CDS |
| GCATGTTCCTGAATGTAGAT+AGG | 0.380329 | tig0001526:-163003 | None:intergenic |
| TACAAGTAAATCACCTGTAT+TGG | 0.383130 | tig0001526:+158890 | Msa1337510:CDS |
| TTTCCCTTGGAAGAATTATA+GGG | 0.385065 | tig0001526:-164170 | None:intergenic |
| CACCTGACCAGCTGCATTCA+GGG | 0.386795 | tig0001526:-164274 | None:intergenic |
| TAGAGAGCTGTTGTTCATAA+AGG | 0.387938 | tig0001526:-165051 | None:intergenic |
| CAGGAACTGGGTCTTGTGCC+AGG | 0.395078 | tig0001526:+161008 | Msa1337510:intron |
| GTTTGTAAATGGACATATCT+TGG | 0.395154 | tig0001526:+159724 | Msa1337510:CDS |
| CTGCTAAGTATGTGACAAAA+TGG | 0.396939 | tig0001526:-165286 | None:intergenic |
| TGAGTGACTGGTTGTCATAC+AGG | 0.406255 | tig0001526:+159573 | Msa1337510:CDS |
| GATGTCCCAACAGGAATTCC+TGG | 0.413797 | tig0001526:-161026 | None:intergenic |
| TGAGCTTCTGAACAAGCTCT+TGG | 0.422616 | tig0001526:+162308 | Msa1337510:CDS |
| GAACATGTAAATCTTCAGTC+AGG | 0.427767 | tig0001526:-162371 | None:intergenic |
| CTAGCAGCCCGATACAGATA+TGG | 0.427837 | tig0001526:+158395 | Msa1337510:CDS |
| TTTGCAAGAATCTTGGTCAA+TGG | 0.433970 | tig0001526:+159532 | Msa1337510:CDS |
| TGGTACTTCTACATGTCATA+TGG | 0.435110 | tig0001526:+161244 | Msa1337510:CDS |
| TTCCTGACTTTCATGGGAAT+AGG | 0.435627 | tig0001526:+162394 | Msa1337510:CDS |
| GATGAGGAAGGAAAGCTTCT+CGG | 0.436211 | tig0001526:+158367 | Msa1337510:CDS |
| AACTTTCAACTGCAATTAGA+TGG | 0.437644 | tig0001526:+165138 | Msa1337510:three_prime_UTR |
| CCATCTTTCCATATCTGTAT+CGG | 0.442697 | tig0001526:-158403 | None:intergenic |
| ACCTACAGAAGTACAGAGTC+TGG | 0.443527 | tig0001526:+158637 | Msa1337510:CDS |
| CCAGAACCCAAAGGATGGCC+AGG | 0.443578 | tig0001526:-160758 | None:intergenic |
| GGCACCGGCAGCGCTCGCGC+TGG | 0.448012 | tig0001526:+158251 | Msa1337510:CDS |
| ACCCACAAGCTTCCATATCT+CGG | 0.448292 | tig0001526:-159783 | None:intergenic |
| ATGATGCTACCTATTGAAAT+CGG | 0.448759 | tig0001526:+158096 | Msa1337510:five_prime_UTR |
| CCTTCAGTAAGCCAATATTC+TGG | 0.454185 | tig0001526:-162077 | None:intergenic |
| GGAAAGTGAATCTGTGCTCT+TGG | 0.455346 | tig0001526:+164188 | Msa1337510:CDS |
| TACCTATTCCCATGAAAGTC+AGG | 0.457567 | tig0001526:-162396 | None:intergenic |
| ATGTTCTTCCTGACTTTCAT+GGG | 0.458051 | tig0001526:+162388 | Msa1337510:CDS |
| GACAACCTTCAGTTTCTGAT+GGG | 0.462804 | tig0001526:-161097 | None:intergenic |
| TTGTGCCAGGAATTCCTGTT+GGG | 0.464564 | tig0001526:+161021 | Msa1337510:CDS |
| AGCCCTGAATGCAGCTGGTC+AGG | 0.465495 | tig0001526:+164272 | Msa1337510:CDS |
| TTCTGTGATGGCTCAGGCGT+TGG | 0.466708 | tig0001526:+165078 | Msa1337510:CDS |
| AAGGAGAATGCTTGAACAGT+TGG | 0.468383 | tig0001526:+165108 | Msa1337510:three_prime_UTR |
| GGAGCAAATTGTTCATTCCT+GGG | 0.468555 | tig0001526:+161276 | Msa1337510:CDS |
| TATCTTTCTTCTTTACATAA+CGG | 0.470586 | tig0001526:-158129 | None:intergenic |
| AGTTCTAACGGTACCTTTGG+TGG | 0.470780 | tig0001526:-158948 | None:intergenic |
| CCACTCCGAGAAACCGAAAC+AGG | 0.474301 | tig0001526:-158801 | None:intergenic |
| GGGCGAAGTGTCGCTTTCCC+TGG | 0.475188 | tig0001526:+160740 | Msa1337510:intron |
| GGAGCGAGAAGCAGAAGGTT+CGG | 0.475193 | tig0001526:-158207 | None:intergenic |
| TCAGGGCGCCTATAAAGGTT+TGG | 0.475718 | tig0001526:-162353 | None:intergenic |
| ACTGTGCAGGGCATTGCATA+TGG | 0.476650 | tig0001526:+162588 | Msa1337510:CDS |
| AACCGTATGGTGTTAGTTTG+TGG | 0.476840 | tig0001526:+161224 | Msa1337510:CDS |
| CAGGAATGAACAATTTGCTC+CGG | 0.480068 | tig0001526:-161274 | None:intergenic |
| CCCGAGATATGGAAGCTTGT+GGG | 0.481065 | tig0001526:+159782 | Msa1337510:CDS |
| CCTTCGCTGCAGTAGGAGTA+AGG | 0.484393 | tig0001526:-160781 | None:intergenic |
| TGACACAAGTGATCAACAAT+TGG | 0.484665 | tig0001526:+162548 | Msa1337510:CDS |
| ATATCTTGTATTTGGCATCA+TGG | 0.486058 | tig0001526:-165021 | None:intergenic |
| CTCGGCGTCGACGTCGGCAC+CGG | 0.486914 | tig0001526:+158236 | Msa1337510:CDS |
| GAAGGCGGGCAGAGTGCTAC+TGG | 0.487058 | tig0001526:+162095 | Msa1337510:CDS |
| GGACAACCTTCAGTTTCTGA+TGG | 0.487406 | tig0001526:-161098 | None:intergenic |
| AGCACAGATTCACTTTCCCT+TGG | 0.488663 | tig0001526:-164183 | None:intergenic |
| ATTTGCAAGGTGTATAGAAC+CGG | 0.490689 | tig0001526:-162150 | None:intergenic |
| CATCTTTCCATATCTGTATC+GGG | 0.490835 | tig0001526:-158402 | None:intergenic |
| TTGTTCATTCCTGGGATTTG+GGG | 0.492785 | tig0001526:+161284 | Msa1337510:CDS |
| TCTAACTTTCCAGCTTCTAT+GGG | 0.496091 | tig0001526:+159499 | Msa1337510:intron |
| TCAATCAATGATGTCCCAAC+AGG | 0.497590 | tig0001526:-161035 | None:intergenic |
| GGGCTTTCATGGCCTCCCTA+AGG | 0.499701 | tig0001526:-164254 | None:intergenic |
| CCTGTTTCGGTTTCTCGGAG+TGG | 0.501459 | tig0001526:+158801 | Msa1337510:CDS |
| TGATGCTCATGCTGGTGGCG+TGG | 0.503744 | tig0001526:+161055 | Msa1337510:CDS |
| CTTGTGCCAGGAATTCCTGT+TGG | 0.504324 | tig0001526:+161020 | Msa1337510:CDS |
| GACGTCGACGCCGAGGAAGA+TGG | 0.505360 | tig0001526:-158228 | None:intergenic |
| ATGCTCATGCTGGTGGCGTG+GGG | 0.506408 | tig0001526:+161057 | Msa1337510:CDS |
| CCACCACAGTATTCCAATAC+AGG | 0.506731 | tig0001526:-158903 | None:intergenic |
| GAAAGTGAATCTGTGCTCTT+GGG | 0.508762 | tig0001526:+164189 | Msa1337510:CDS |
| TTGTATTGATCCTTTCAGCT+TGG | 0.509862 | tig0001526:-158872 | None:intergenic |
| AGCAGAAGGTTCGGTGGGTG+AGG | 0.511787 | tig0001526:-158198 | None:intergenic |
| CCCACAAGCTTCCATATCTC+GGG | 0.512125 | tig0001526:-159782 | None:intergenic |
| AAAGAAATATAATAGCCTTA+GGG | 0.515674 | tig0001526:+164239 | Msa1337510:CDS |
| GGTGGATGGATTTGAGTGAC+TGG | 0.517100 | tig0001526:+159561 | Msa1337510:CDS |
| AAAGAACCCTATCTACATTC+AGG | 0.526921 | tig0001526:+162996 | Msa1337510:CDS |
| CATCCTTACTTTGTGACCAT+GGG | 0.529335 | tig0001526:-162640 | None:intergenic |
| CATGTTCCTGAATGTAGATA+GGG | 0.529832 | tig0001526:-163002 | None:intergenic |
| AAGAAATGTGATAGTATGGA+TGG | 0.531924 | tig0001526:+158833 | Msa1337510:CDS |
| TAATCGTTCTGTGATGGCTC+AGG | 0.533125 | tig0001526:+165072 | Msa1337510:CDS |
| ATTGCAGACCCAAAATCAAA+AGG | 0.535856 | tig0001526:+162504 | Msa1337510:CDS |
| CAATGCCCTGCACAGTTGCT+AGG | 0.539531 | tig0001526:-162581 | None:intergenic |
| TCTATACCTAGCAACTGTGC+AGG | 0.543459 | tig0001526:+162575 | Msa1337510:CDS |
| ATGAAAGCCCTGAATGCAGC+TGG | 0.545563 | tig0001526:+164267 | Msa1337510:CDS |
| GCATCCTTACTTTGTGACCA+TGG | 0.549525 | tig0001526:-162641 | None:intergenic |
| GGGAAGCAGCTCTATTTGCA+AGG | 0.553538 | tig0001526:-162163 | None:intergenic |
| CCTTACTCCTACTGCAGCGA+AGG | 0.555644 | tig0001526:+160781 | Msa1337510:CDS |
| TTCGCAGCTACTTGTTCACT+CGG | 0.559234 | tig0001526:+158662 | Msa1337510:CDS |
| CTGCCCTATAATTCTTCCAA+GGG | 0.560555 | tig0001526:+164167 | Msa1337510:CDS |
| AATATTGGCTTACTGAAGGC+GGG | 0.560778 | tig0001526:+162081 | Msa1337510:CDS |
| GGAAGCAATTTGCAACCGTA+TGG | 0.561289 | tig0001526:+161211 | Msa1337510:CDS |
| GCAGGATTGTTTGATGAGGA+AGG | 0.563949 | tig0001526:+158355 | Msa1337510:intron |
| ATCTTCCTCGGCGTCGACGT+CGG | 0.564258 | tig0001526:+158230 | Msa1337510:CDS |
| CATGTCATATGGCTGTATCC+CGG | 0.565315 | tig0001526:+161255 | Msa1337510:CDS |
| GAATATTGGCTTACTGAAGG+CGG | 0.565847 | tig0001526:+162080 | Msa1337510:CDS |
| AGGAATGAACAATTTGCTCC+GGG | 0.568276 | tig0001526:-161273 | None:intergenic |
| GCTGCCCTATAATTCTTCCA+AGG | 0.568690 | tig0001526:+164166 | Msa1337510:CDS |
| TTACTAATCACACGACCATA+CGG | 0.570228 | tig0001526:-165322 | None:intergenic |
| CCGATACAGATATGGAAAGA+TGG | 0.571912 | tig0001526:+158403 | Msa1337510:CDS |
| GCTTCTCGCTCCATCTTCCT+CGG | 0.576028 | tig0001526:+158218 | Msa1337510:CDS |
| CATATAATTGAAAACCATGC+CGG | 0.578445 | tig0001526:+162131 | Msa1337510:CDS |
| ACCAGAAATGCAACCACCAA+AGG | 0.579084 | tig0001526:+158935 | Msa1337510:CDS |
| CAGAACCCAAAGGATGGCCA+GGG | 0.580895 | tig0001526:-160757 | None:intergenic |
| TCCCGAGATATGGAAGCTTG+TGG | 0.581118 | tig0001526:+159781 | Msa1337510:CDS |
| TACCACAAACTAACACCATA+CGG | 0.584648 | tig0001526:-161226 | None:intergenic |
| TCATTGATTGATGCTCATGC+TGG | 0.585328 | tig0001526:+161047 | Msa1337510:CDS |
| AGTAGTCTACCTGACCAAAA+CGG | 0.588840 | tig0001526:-161308 | None:intergenic |
| CGAGAAGCAGAAGGTTCGGT+GGG | 0.589881 | tig0001526:-158203 | None:intergenic |
| AACCGAAACAGGTGAGCTGT+CGG | 0.593045 | tig0001526:-158790 | None:intergenic |
| GCTCTCTAATCGTTCTGTGA+TGG | 0.593052 | tig0001526:+165066 | Msa1337510:CDS |
| CAAGGTGTATAGAACCGGCA+TGG | 0.596311 | tig0001526:-162145 | None:intergenic |
| ATCATTCTGCTGCAAAACGA+GGG | 0.597147 | tig0001526:-158078 | None:intergenic |
| GAGAGAATACATTAATCCGA+TGG | 0.597589 | tig0001526:+158175 | Msa1337510:exon |
| TGTTTATGAATTAGTTGCGG+TGG | 0.598795 | tig0001526:+158764 | Msa1337510:intron |
| TGTTCATTCCTGGGATTTGG+GGG | 0.599170 | tig0001526:+161285 | Msa1337510:CDS |
| CATCATTCTGCTGCAAAACG+AGG | 0.601352 | tig0001526:-158079 | None:intergenic |
| CTCAGGCGTTGGCATAGCAA+AGG | 0.601934 | tig0001526:+165089 | Msa1337510:exon |
| AAGCATATATTCATGCCTTG+TGG | 0.606122 | tig0001526:+165176 | Msa1337510:three_prime_UTR |
| CTATACCTAGCAACTGTGCA+GGG | 0.609843 | tig0001526:+162576 | Msa1337510:CDS |
| TAAGGCCAGAACCCAAAGGA+TGG | 0.612845 | tig0001526:-160763 | None:intergenic |
| AGCAGCATAGTGATACCGTA+TGG | 0.613972 | tig0001526:+165307 | Msa1337510:three_prime_UTR |
| GCCAAATACAAGATATTCCG+TGG | 0.614406 | tig0001526:+165028 | Msa1337510:CDS |
| ATTCTTGCCTTCGCTGCAGT+AGG | 0.614851 | tig0001526:-160788 | None:intergenic |
| TGACATACTGCATGTGAGCA+TGG | 0.614970 | tig0001526:-159747 | None:intergenic |
| CGGTGCCGACGTCGACGCCG+AGG | 0.618580 | tig0001526:-158235 | None:intergenic |
| GAGCTGTAGACCAAGCTGAA+AGG | 0.619207 | tig0001526:+158862 | Msa1337510:CDS |
| TGCTCATGCTGGTGGCGTGG+GGG | 0.620437 | tig0001526:+161058 | Msa1337510:CDS |
| CCCAGACTCTGTACTTCTGT+AGG | 0.620897 | tig0001526:-158638 | None:intergenic |
| CCAGAATATTGGCTTACTGA+AGG | 0.621883 | tig0001526:+162077 | Msa1337510:CDS |
| GCGAGAAGCAGAAGGTTCGG+TGG | 0.622415 | tig0001526:-158204 | None:intergenic |
| CAACCTTCAGTTTCTGATGG+GGG | 0.623501 | tig0001526:-161095 | None:intergenic |
| GTAGAGCATTGTAATGCCCA+TGG | 0.624269 | tig0001526:+162624 | Msa1337510:CDS |
| ATCAACACATTACTTGCATG+TGG | 0.626073 | tig0001526:+162964 | Msa1337510:CDS |
| GAAATATAATAGCCTTAGGG+AGG | 0.627076 | tig0001526:+164242 | Msa1337510:CDS |
| ACAACCTTCAGTTTCTGATG+GGG | 0.628160 | tig0001526:-161096 | None:intergenic |
| ATATGTCCATTTACAAACTG+TGG | 0.629492 | tig0001526:-159719 | None:intergenic |
| TTGATTGATGCTCATGCTGG+TGG | 0.633063 | tig0001526:+161050 | Msa1337510:CDS |
| GGAGTAAGGCCAGAACCCAA+AGG | 0.635240 | tig0001526:-160767 | None:intergenic |
| GAAAGATGGTGCCTTTGTTG+AGG | 0.636370 | tig0001526:+158417 | Msa1337510:CDS |
| AACATGTAAATCTTCAGTCA+GGG | 0.637963 | tig0001526:-162370 | None:intergenic |
| CCTACAGAAGTACAGAGTCT+GGG | 0.640434 | tig0001526:+158638 | Msa1337510:CDS |
| CAAACAAGTTACCTCAACAA+AGG | 0.656353 | tig0001526:-158428 | None:intergenic |
| TGATGCAGGATTGTTTGATG+AGG | 0.660491 | tig0001526:+158351 | Msa1337510:intron |
| GCTGTTGTTCATAAAGGCCA+CGG | 0.660748 | tig0001526:-165045 | None:intergenic |
| AAGATGGAGCGAGAAGCAGA+AGG | 0.666509 | tig0001526:-158212 | None:intergenic |
| AACACATTACTTGCATGTGG+AGG | 0.667479 | tig0001526:+162967 | Msa1337510:CDS |
| CGTATCCTCAGAGAATGACA+AGG | 0.671302 | tig0001526:+161190 | Msa1337510:intron |
| CCTGTATTGGAATACTGTGG+TGG | 0.701824 | tig0001526:+158903 | Msa1337510:CDS |
| TCACCTGTATTGGAATACTG+TGG | 0.766102 | tig0001526:+158900 | Msa1337510:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | AAAGTTAAATAAGAATATAA+TGG | - | tig0001526:159288-159307 | None:intergenic | 10.0% |
| !!! | TTATATTCTTATTTAACTTT+TGG | + | tig0001526:159288-159307 | Msa1337510:intron | 10.0% |
| !! | TTATTATTAATGATAAACTT+TGG | + | tig0001526:160203-160222 | Msa1337510:intron | 10.0% |
| !!! | TTATTTTATGATTAGAATTA+CGG | + | tig0001526:164348-164367 | Msa1337510:intron | 10.0% |
| !! | TATCAAACTAAATTAAATTA+AGG | - | tig0001526:165362-165381 | None:intergenic | 10.0% |
| !! | ATGAATCAACATTATTATTA+CGG | - | tig0001526:158526-158545 | None:intergenic | 15.0% |
| !!! | AATTTTTTTCTTTCCATTTA+TGG | + | tig0001526:160912-160931 | Msa1337510:intron | 15.0% |
| !! | TATCAATTAAATCTATATTC+TGG | + | tig0001526:161335-161354 | Msa1337510:intron | 15.0% |
| !! | ATATTCATAATTGTTTATCT+TGG | + | tig0001526:162003-162022 | Msa1337510:intron | 15.0% |
| !! | TAAAACAAAATAGATTAAGA+TGG | - | tig0001526:163962-163981 | None:intergenic | 15.0% |
| !!! | TTTTATTTTCCGATTTCAAT+AGG | - | tig0001526:158108-158127 | None:intergenic | 20.0% |
| !! | TATCTTTCTTCTTTACATAA+CGG | - | tig0001526:158132-158151 | None:intergenic | 20.0% |
| !!! | CATTTCATTTTTCGTTAAAT+TGG | + | tig0001526:158308-158327 | Msa1337510:intron | 20.0% |
| !!! | CTTTTTTGTGAAAGAATAAT+TGG | - | tig0001526:159225-159244 | None:intergenic | 20.0% |
| !!! | AATATAATTTTCTGATAGAC+AGG | - | tig0001526:159333-159352 | None:intergenic | 20.0% |
| !! | TAATAAATATAAGTAGATGC+TGG | - | tig0001526:160189-160208 | None:intergenic | 20.0% |
| !! | TCAACTTGCAATTATTTATA+TGG | + | tig0001526:160376-160395 | Msa1337510:intron | 20.0% |
| !! | ACTCAATCAATTATAATAAC+AGG | + | tig0001526:160719-160738 | Msa1337510:intron | 20.0% |
| !! | CTCAATCAATTATAATAACA+GGG | + | tig0001526:160720-160739 | Msa1337510:intron | 20.0% |
| !!! | CTGGTTTTGATATTATTAAT+GGG | + | tig0001526:160975-160994 | Msa1337510:intron | 20.0% |
| !! | AAATTACACTTATCAATTGA+AGG | - | tig0001526:161494-161513 | None:intergenic | 20.0% |
| !! | AAACTATAAGAGAAACTATT+AGG | + | tig0001526:161562-161581 | Msa1337510:intron | 20.0% |
| !! | TACTTATTGTTTATCCTTTA+TGG | + | tig0001526:161870-161889 | Msa1337510:intron | 20.0% |
| !! | TTAAATCAAATAGAAGAGAA+TGG | - | tig0001526:161972-161991 | None:intergenic | 20.0% |
| !! | GCAAATATTGTATAAAACAT+AGG | - | tig0001526:162442-162461 | None:intergenic | 20.0% |
| !!! | TTTCTGTCATTTTTGTATAA+CGG | + | tig0001526:163735-163754 | Msa1337510:intron | 20.0% |
| !! | ATGAAGTGTGATTTATTTAT+AGG | - | tig0001526:163772-163791 | None:intergenic | 20.0% |
| !!! | TCAATTTTTTTCTTGACTTT+AGG | - | tig0001526:163841-163860 | None:intergenic | 20.0% |
| !!! | AAAGAAATATAATAGCCTTA+GGG | + | tig0001526:164239-164258 | Msa1337510:CDS | 20.0% |
| !! | GAAGTATAAATAAAGATAGA+AGG | - | tig0001526:164315-164334 | None:intergenic | 20.0% |
| !!! | ATCTGAAATATGTAGTAAAT+CGG | + | tig0001526:164508-164527 | Msa1337510:intron | 20.0% |
| !!! | TGTTTTTTTAACTAGTAACT+AGG | - | tig0001526:164672-164691 | None:intergenic | 20.0% |
| !!! | ATTTTCAAGGTTATGTTTTT+CGG | + | tig0001526:165230-165249 | Msa1337510:three_prime_UTR | 20.0% |
| ! | TGAAATCGTTGAAAATGAAT+TGG | - | tig0001526:158290-158309 | None:intergenic | 25.0% |
| ! | GAAATTGATGTACTTATTCA+TGG | + | tig0001526:158706-158725 | Msa1337510:intron | 25.0% |
| ! | GATTGTTTATGAATTAGTTG+CGG | + | tig0001526:158761-158780 | Msa1337510:intron | 25.0% |
| !!! | GTTTTAGACTTTTATGGTAA+TGG | + | tig0001526:159031-159050 | Msa1337510:intron | 25.0% |
| ! | ATCTGTATTGGATAAAGTTA+AGG | + | tig0001526:159130-159149 | Msa1337510:intron | 25.0% |
| ! | ACATCATAGTTTATTTGAGT+AGG | + | tig0001526:159153-159172 | Msa1337510:intron | 25.0% |
| ! | TGAAAGAATAATTGGTCAAT+AGG | - | tig0001526:159217-159236 | None:intergenic | 25.0% |
| ! | TTGAGTATTATACTCCTTTA+TGG | + | tig0001526:159439-159458 | Msa1337510:intron | 25.0% |
| ! | AAGAAAATTTGCAAGAATCT+TGG | + | tig0001526:159525-159544 | Msa1337510:CDS | 25.0% |
| !! | GTTGTATTTGGATTAATTTG+TGG | + | tig0001526:159653-159672 | Msa1337510:intron | 25.0% |
| !!! | TTAATTTGTGGCTGTTTTTT+AGG | + | tig0001526:159665-159684 | Msa1337510:intron | 25.0% |
| !!! | TAATTTGTGGCTGTTTTTTA+GGG | + | tig0001526:159666-159685 | Msa1337510:intron | 25.0% |
| !! | ACAATTAAGCTTTTGATAGA+TGG | - | tig0001526:159909-159928 | None:intergenic | 25.0% |
| ! | CTATCAAAAGCTTAATTGTT+AGG | + | tig0001526:159910-159929 | Msa1337510:intron | 25.0% |
| ! | AATTTCTTTATGAGAACGAT+GGG | + | tig0001526:160049-160068 | Msa1337510:intron | 25.0% |
| ! | AGTTTGTATCAAAATCTCTA+TGG | - | tig0001526:160119-160138 | None:intergenic | 25.0% |
| ! | TTGATATAAACTTGTCAACA+AGG | - | tig0001526:160424-160443 | None:intergenic | 25.0% |
| !!! | ATGACATTTGTTTTAAGACA+TGG | - | tig0001526:160493-160512 | None:intergenic | 25.0% |
| ! | ATGTCTTAAAACAAATGTCA+TGG | + | tig0001526:160492-160511 | Msa1337510:intron | 25.0% |
| ! | AAATCAAACATGTATTTGAG+TGG | + | tig0001526:160874-160893 | Msa1337510:intron | 25.0% |
| !!! | GCTGGTTTTGATATTATTAA+TGG | + | tig0001526:160974-160993 | Msa1337510:intron | 25.0% |
| !!! | ATTAATGGGTTGAAATTTTC+AGG | + | tig0001526:160989-161008 | Msa1337510:intron | 25.0% |
| !! | GTTTCTCTTATAGTTTTTCT+AGG | - | tig0001526:161558-161577 | None:intergenic | 25.0% |
| !! | TAATGAGTTGGACAAAAATA+TGG | + | tig0001526:161599-161618 | Msa1337510:intron | 25.0% |
| ! | TGGTTTATGATAGAACATTA+TGG | + | tig0001526:161619-161638 | Msa1337510:intron | 25.0% |
| ! | TTCATTAATAGATCTTGCTA+TGG | + | tig0001526:161713-161732 | Msa1337510:intron | 25.0% |
| !!! | TATCTGAAAGGTATTCATTT+GGG | + | tig0001526:161746-161765 | Msa1337510:intron | 25.0% |
| !! | TTTATCTGAATTTTCAGCAA+TGG | + | tig0001526:162052-162071 | Msa1337510:intron | 25.0% |
| ! | ATATTCCAAATCCAAATGAT+GGG | - | tig0001526:162205-162224 | None:intergenic | 25.0% |
| ! | TATATTCCAAATCCAAATGA+TGG | - | tig0001526:162206-162225 | None:intergenic | 25.0% |
| ! | ATAAAACATAGGAAAGATGT+TGG | - | tig0001526:162431-162450 | None:intergenic | 25.0% |
| ! | TAATATGCTGCTATATATCT+TGG | + | tig0001526:162469-162488 | Msa1337510:intron | 25.0% |
| !!! | AGATAACTCCTTTTGATTTT+GGG | - | tig0001526:162515-162534 | None:intergenic | 25.0% |
| !!! | TAGATAACTCCTTTTGATTT+TGG | - | tig0001526:162516-162535 | None:intergenic | 25.0% |
| ! | AAATCAAAAGGAGTTATCTA+TGG | + | tig0001526:162516-162535 | Msa1337510:CDS | 25.0% |
| ! | ATAATCTCAAATTTGTGTCA+TGG | - | tig0001526:162673-162692 | None:intergenic | 25.0% |
| ! | TAACATCCATTACACATATT+TGG | + | tig0001526:162720-162739 | Msa1337510:intron | 25.0% |
| ! | AACATCCATTACACATATTT+GGG | + | tig0001526:162721-162740 | Msa1337510:intron | 25.0% |
| ! | ATAATCCCAAATATGTGTAA+TGG | - | tig0001526:162729-162748 | None:intergenic | 25.0% |
| ! | ACAATTACACAAGTAACTTT+GGG | - | tig0001526:162851-162870 | None:intergenic | 25.0% |
| ! | AACAATTACACAAGTAACTT+TGG | - | tig0001526:162852-162871 | None:intergenic | 25.0% |
| ! | GATATTATTGGTATGTATTG+AGG | + | tig0001526:163027-163046 | Msa1337510:intron | 25.0% |
| !! | ATTTCAAGCTATATTTTGCA+GGG | - | tig0001526:163921-163940 | None:intergenic | 25.0% |
| !! | AATTTCAAGCTATATTTTGC+AGG | - | tig0001526:163922-163941 | None:intergenic | 25.0% |
| !! | ATCACATTTACAATTTTCCT+AGG | + | tig0001526:164144-164163 | Msa1337510:intron | 25.0% |
| ! | CAAAGAAATATAATAGCCTT+AGG | + | tig0001526:164238-164257 | Msa1337510:CDS | 25.0% |
| ! | ATAAAGATAGAAGGAAAGAA+AGG | - | tig0001526:164306-164325 | None:intergenic | 25.0% |
| ! | AAAACAATGCAAATTGGTAA+TGG | - | tig0001526:164610-164629 | None:intergenic | 25.0% |
| !! | AGACATATTTTGCTTTCTAA+TGG | + | tig0001526:164852-164871 | Msa1337510:intron | 25.0% |
| !!! | CTTGTATAGAAAGCATTTAA+AGG | - | tig0001526:164881-164900 | None:intergenic | 25.0% |
| !! | TATAAATTTTTGCATCCACA+AGG | - | tig0001526:165194-165213 | None:intergenic | 25.0% |
| ! | CATAACCTTGAAAATCAATA+TGG | - | tig0001526:165225-165244 | None:intergenic | 25.0% |
| ATGATGCTACCTATTGAAAT+CGG | + | tig0001526:158096-158115 | Msa1337510:five_prime_UTR | 30.0% | |
| AAATGAATTGGAAGAAGGAA+TGG | - | tig0001526:158278-158297 | None:intergenic | 30.0% | |
| GTTGAAAATGAATTGGAAGA+AGG | - | tig0001526:158283-158302 | None:intergenic | 30.0% | |
| !! | TTTGTTGAGGTAACTTGTTT+GGG | + | tig0001526:158430-158449 | Msa1337510:intron | 30.0% |
| TATTATTACGGCAATGAAAG+TGG | - | tig0001526:158514-158533 | None:intergenic | 30.0% | |
| !! | AGATTGCTGTTTAGAACAAA+AGG | - | tig0001526:158552-158571 | None:intergenic | 30.0% |
| AGCAATCTTCTACAGATATA+TGG | + | tig0001526:158564-158583 | Msa1337510:intron | 30.0% | |
| CAAGAAGAAATGTGATAGTA+TGG | + | tig0001526:158829-158848 | Msa1337510:CDS | 30.0% | |
| AAGAAATGTGATAGTATGGA+TGG | + | tig0001526:158833-158852 | Msa1337510:CDS | 30.0% | |
| TACAAGTAAATCACCTGTAT+TGG | + | tig0001526:158890-158909 | Msa1337510:CDS | 30.0% | |
| !!! | AAGGCAGTTTTAGACTTTTA+TGG | + | tig0001526:159025-159044 | Msa1337510:intron | 30.0% |
| !! | TTATGGTAATGGATGTTCAA+CGG | + | tig0001526:159042-159061 | Msa1337510:intron | 30.0% |
| ! | TGTAGTAATTAACGCTTTTG+TGG | - | tig0001526:159081-159100 | None:intergenic | 30.0% |
| CAAGGAATCATAATCTGTAT+TGG | + | tig0001526:159118-159137 | Msa1337510:intron | 30.0% | |
| CTCCTTTATGGATTCAATTA+TGG | + | tig0001526:159451-159470 | Msa1337510:intron | 30.0% | |
| AGCCATAATTGAATCCATAA+AGG | - | tig0001526:159456-159475 | None:intergenic | 30.0% | |
| ATATGTCCATTTACAAACTG+TGG | - | tig0001526:159722-159741 | None:intergenic | 30.0% | |
| GTTTGTAAATGGACATATCT+TGG | + | tig0001526:159724-159743 | Msa1337510:CDS | 30.0% | |
| CAATTTCTTTATGAGAACGA+TGG | + | tig0001526:160048-160067 | Msa1337510:intron | 30.0% | |
| !! | CAAGAGTTTAAGTTGAAGAT+TGG | + | tig0001526:160143-160162 | Msa1337510:intron | 30.0% |
| ATGCAAATTTCCTGTTAAGT+AGG | + | tig0001526:160292-160311 | Msa1337510:intron | 30.0% | |
| ! | TTAAGTAGGTGATTTGTACT+GGG | + | tig0001526:160306-160325 | Msa1337510:intron | 30.0% |
| GTAAAGAATATTGCTAGACA+AGG | - | tig0001526:160456-160475 | None:intergenic | 30.0% | |
| TGAGTATCAAGATAAGAAGT+GGG | - | tig0001526:160704-160723 | None:intergenic | 30.0% | |
| TTGAGTATCAAGATAAGAAG+TGG | - | tig0001526:160705-160724 | None:intergenic | 30.0% | |
| TATTTGAGTGGTTGGAAAAA+TGG | + | tig0001526:160886-160905 | Msa1337510:intron | 30.0% | |
| AGTGAAACAATCTCCATAAA+TGG | - | tig0001526:160928-160947 | None:intergenic | 30.0% | |
| GACTTACAAGCATAAATACA+AGG | - | tig0001526:161132-161151 | None:intergenic | 30.0% | |
| ! | ACTACAATTTTCAACCATTG+TGG | - | tig0001526:161466-161485 | None:intergenic | 30.0% |
| AGACTTGAAGATTAATGAGT+TGG | + | tig0001526:161587-161606 | Msa1337510:intron | 30.0% | |
| ! | TTAATAGATCTTGCTATGGT+TGG | + | tig0001526:161717-161736 | Msa1337510:intron | 30.0% |
| !! | GTATCTGAAAGGTATTCATT+TGG | + | tig0001526:161745-161764 | Msa1337510:intron | 30.0% |
| TATCGCAAATGTCATTCATA+TGG | + | tig0001526:161819-161838 | Msa1337510:intron | 30.0% | |
| ATCGCAAATGTCATTCATAT+GGG | + | tig0001526:161820-161839 | Msa1337510:intron | 30.0% | |
| ! | CTTTGTGAACATATTTTGCA+TGG | + | tig0001526:161846-161865 | Msa1337510:intron | 30.0% |
| CCAATATCAATGTTCCATAA+AGG | - | tig0001526:161887-161906 | None:intergenic | 30.0% | |
| CCTTTATGGAACATTGATAT+TGG | + | tig0001526:161884-161903 | Msa1337510:intron | 30.0% | |
| TTGATATTGGCATAGAAAGT+AGG | + | tig0001526:161897-161916 | Msa1337510:intron | 30.0% | |
| CATATAATTGAAAACCATGC+CGG | + | tig0001526:162131-162150 | Msa1337510:CDS | 30.0% | |
| TGGGAAAAAAACCTTACTTT+GGG | - | tig0001526:162186-162205 | None:intergenic | 30.0% | |
| ATGGGAAAAAAACCTTACTT+TGG | - | tig0001526:162187-162206 | None:intergenic | 30.0% | |
| !!! | AAGGTTTTTTTCCCATCATT+TGG | + | tig0001526:162191-162210 | Msa1337510:intron | 30.0% |
| ! | TTTTTCCCATCATTTGGATT+TGG | + | tig0001526:162197-162216 | Msa1337510:intron | 30.0% |
| AACATGTAAATCTTCAGTCA+GGG | - | tig0001526:162373-162392 | None:intergenic | 30.0% | |
| TTTCATGGGAATAGGTAATT+TGG | + | tig0001526:162402-162421 | Msa1337510:intron | 30.0% | |
| TGAGATTATTACCAGTTCTT+TGG | + | tig0001526:162684-162703 | Msa1337510:intron | 30.0% | |
| GAGATTATTACCAGTTCTTT+GGG | + | tig0001526:162685-162704 | Msa1337510:intron | 30.0% | |
| TGGGATTATTATCAGTTCTT+TGG | + | tig0001526:162740-162759 | Msa1337510:intron | 30.0% | |
| GGGATTATTATCAGTTCTTT+GGG | + | tig0001526:162741-162760 | Msa1337510:intron | 30.0% | |
| TTATTATCAGTTCTTTGGGT+TGG | + | tig0001526:162745-162764 | Msa1337510:intron | 30.0% | |
| ATAGTAAGGAACATTTCAGT+GGG | - | tig0001526:162801-162820 | None:intergenic | 30.0% | |
| AATTACACAAGTAACTTTGG+GGG | - | tig0001526:162849-162868 | None:intergenic | 30.0% | |
| CAATTACACAAGTAACTTTG+GGG | - | tig0001526:162850-162869 | None:intergenic | 30.0% | |
| TATGCTAGTATGCGTTATAT+AGG | + | tig0001526:163140-163159 | Msa1337510:intron | 30.0% | |
| ATGCTAGTATGCGTTATATA+GGG | + | tig0001526:163141-163160 | Msa1337510:intron | 30.0% | |
| ATATATGATAGAGCGTGATA+TGG | - | tig0001526:163249-163268 | None:intergenic | 30.0% | |
| AGTAAGGAAAGTAGATTTGA+CGG | - | tig0001526:163367-163386 | None:intergenic | 30.0% | |
| ! | TCAACCATCTTTTCTACAAT+AGG | + | tig0001526:163438-163457 | Msa1337510:intron | 30.0% |
| ATAGCATTAGAGTTAGAGTT+GGG | - | tig0001526:163470-163489 | None:intergenic | 30.0% | |
| ! | AAAGTCTGAAATGCTAACAA+GGG | - | tig0001526:163867-163886 | None:intergenic | 30.0% |
| ! | TAAAGTCTGAAATGCTAACA+AGG | - | tig0001526:163868-163887 | None:intergenic | 30.0% |
| AGCATTTCAGACTTTATACA+TGG | + | tig0001526:163872-163891 | Msa1337510:intron | 30.0% | |
| CTTGAAATTGTTCCATGATT+TGG | + | tig0001526:163933-163952 | Msa1337510:intron | 30.0% | |
| TTAAGATGGAATCCAAATCA+TGG | - | tig0001526:163948-163967 | None:intergenic | 30.0% | |
| TTTCCCTTGGAAGAATTATA+GGG | - | tig0001526:164173-164192 | None:intergenic | 30.0% | |
| TAAGAGTGACTTTATGGTAA+TGG | - | tig0001526:164374-164393 | None:intergenic | 30.0% | |
| TTGTAACTTTATGCCATTAC+TGG | - | tig0001526:164397-164416 | None:intergenic | 30.0% | |
| ATGGCATAAAGTTACAAGTT+AGG | + | tig0001526:164400-164419 | Msa1337510:intron | 30.0% | |
| TAAAGTTACAAGTTAGGATG+AGG | + | tig0001526:164406-164425 | Msa1337510:intron | 30.0% | |
| ! | TACTGCAAATGTTGATGAAA+CGG | - | tig0001526:164452-164471 | None:intergenic | 30.0% |
| TATTTCAGATCCTACTAGTT+TGG | - | tig0001526:164498-164517 | None:intergenic | 30.0% | |
| CTTCACAAAACAATGCAAAT+TGG | - | tig0001526:164616-164635 | None:intergenic | 30.0% | |
| AGCATGTCCATAAAATAGTT+TGG | + | tig0001526:164634-164653 | Msa1337510:intron | 30.0% | |
| GCATGTCCATAAAATAGTTT+GGG | + | tig0001526:164635-164654 | Msa1337510:intron | 30.0% | |
| ! | TCACATCCCAAACTATTTTA+TGG | - | tig0001526:164644-164663 | None:intergenic | 30.0% |
| TTAACCGTCTATAGATGATT+AGG | + | tig0001526:164790-164809 | Msa1337510:intron | 30.0% | |
| AAAATATGTCTATAGTGCAC+AGG | - | tig0001526:164843-164862 | None:intergenic | 30.0% | |
| AAATGCTTTCTATACAAGTC+AGG | + | tig0001526:164883-164902 | Msa1337510:intron | 30.0% | |
| !!! | TCATGGTACTTTTTCACTTT+TGG | - | tig0001526:165007-165026 | None:intergenic | 30.0% |
| ATATCTTGTATTTGGCATCA+TGG | - | tig0001526:165024-165043 | None:intergenic | 30.0% | |
| AACTTTCAACTGCAATTAGA+TGG | + | tig0001526:165138-165157 | Msa1337510:three_prime_UTR | 30.0% | |
| !!! | TGATGCCATATTGATTTTCA+AGG | + | tig0001526:165217-165236 | Msa1337510:three_prime_UTR | 30.0% |
| GAGAGAATACATTAATCCGA+TGG | + | tig0001526:158175-158194 | Msa1337510:exon | 35.0% | |
| AATTGTGTTGCATTTGATGC+AGG | + | tig0001526:158337-158356 | Msa1337510:intron | 35.0% | |
| CATCTTTCCATATCTGTATC+GGG | - | tig0001526:158405-158424 | None:intergenic | 35.0% | |
| CCATCTTTCCATATCTGTAT+CGG | - | tig0001526:158406-158425 | None:intergenic | 35.0% | |
| CAAACAAGTTACCTCAACAA+AGG | - | tig0001526:158431-158450 | None:intergenic | 35.0% | |
| !! | CTTTGTTGAGGTAACTTGTT+TGG | + | tig0001526:158429-158448 | Msa1337510:intron | 35.0% |
| TGTTTATGAATTAGTTGCGG+TGG | + | tig0001526:158764-158783 | Msa1337510:intron | 35.0% | |
| ! | TTGTATTGATCCTTTCAGCT+TGG | - | tig0001526:158875-158894 | None:intergenic | 35.0% |
| GAACAGATACTACACTACAT+TGG | - | tig0001526:159005-159024 | None:intergenic | 35.0% | |
| TGTAGTGTAGTATCTGTTCA+AGG | + | tig0001526:159006-159025 | Msa1337510:intron | 35.0% | |
| AATGGATGTTCAACGGTTAA+TGG | + | tig0001526:159049-159068 | Msa1337510:intron | 35.0% | |
| TTACTACATCTGCAAGCAAA+TGG | + | tig0001526:159093-159112 | Msa1337510:intron | 35.0% | |
| TACTACATCTGCAAGCAAAT+GGG | + | tig0001526:159094-159113 | Msa1337510:intron | 35.0% | |
| ACCAGTTAAACACAGTTGAT+AGG | + | tig0001526:159178-159197 | Msa1337510:intron | 35.0% | |
| TCCTATCAACTGTGTTTAAC+TGG | - | tig0001526:159182-159201 | None:intergenic | 35.0% | |
| AGCTTCAAAGGAAATTCGTA+GGG | - | tig0001526:159356-159375 | None:intergenic | 35.0% | |
| TAGCTTCAAAGGAAATTCGT+AGG | - | tig0001526:159357-159376 | None:intergenic | 35.0% | |
| ATCTAACTTTCCAGCTTCTA+TGG | + | tig0001526:159498-159517 | Msa1337510:intron | 35.0% | |
| TCTAACTTTCCAGCTTCTAT+GGG | + | tig0001526:159499-159518 | Msa1337510:intron | 35.0% | |
| TTTCTTTAACCCATAGAAGC+TGG | - | tig0001526:159511-159530 | None:intergenic | 35.0% | |
| TTTGCAAGAATCTTGGTCAA+TGG | + | tig0001526:159532-159551 | Msa1337510:CDS | 35.0% | |
| ! | AATCTTGGTCAATGGTTTTC+AGG | + | tig0001526:159540-159559 | Msa1337510:CDS | 35.0% |
| TGTTCGAGTCTAGTTGTATT+TGG | + | tig0001526:159641-159660 | Msa1337510:intron | 35.0% | |
| TTTGCACCACAGTTTGTAAA+TGG | + | tig0001526:159713-159732 | Msa1337510:CDS | 35.0% | |
| !! | TTTTGGGAGGAAATTGGTTT+GGG | + | tig0001526:159817-159836 | Msa1337510:intron | 35.0% |
| GAAGGACATCATGCTAAAAT+AGG | + | tig0001526:159850-159869 | Msa1337510:intron | 35.0% | |
| TTGATAGATGGTTCTTGACA+AGG | - | tig0001526:159897-159916 | None:intergenic | 35.0% | |
| AAAGCTTAATTGTTAGGTGC+TGG | + | tig0001526:159916-159935 | Msa1337510:intron | 35.0% | |
| AAGCTTAATTGTTAGGTGCT+GGG | + | tig0001526:159917-159936 | Msa1337510:intron | 35.0% | |
| !! | ACAAACGTTTCAAGTTCAAG+AGG | - | tig0001526:159997-160016 | None:intergenic | 35.0% |
| GTACAAATCACCTACTTAAC+AGG | - | tig0001526:160305-160324 | None:intergenic | 35.0% | |
| ! | GTTAAGTAGGTGATTTGTAC+TGG | + | tig0001526:160305-160324 | Msa1337510:intron | 35.0% |
| GCAATATTCTTTACTCCCTA+TGG | + | tig0001526:160462-160481 | Msa1337510:intron | 35.0% | |
| TAAGACATGGACTTTCCATA+GGG | - | tig0001526:160480-160499 | None:intergenic | 35.0% | |
| TTAAGACATGGACTTTCCAT+AGG | - | tig0001526:160481-160500 | None:intergenic | 35.0% | |
| ! | ATATTCTTTTCATGCTCGAC+CGG | + | tig0001526:160611-160630 | Msa1337510:intron | 35.0% |
| CAGAGATAAATAGCAAAGAG+TGG | - | tig0001526:160677-160696 | None:intergenic | 35.0% | |
| CAAACATGTATTTGAGTGGT+TGG | + | tig0001526:160878-160897 | Msa1337510:intron | 35.0% | |
| TGGAGATTGTTTCACTTTGA+TGG | + | tig0001526:160932-160951 | Msa1337510:intron | 35.0% | |
| GGAGATTGTTTCACTTTGAT+GGG | + | tig0001526:160933-160952 | Msa1337510:intron | 35.0% | |
| !! | GGTTGAAATTTTCAGGAACT+GGG | + | tig0001526:160996-161015 | Msa1337510:intron | 35.0% |
| CATAAATACAAGGTAAGTCG+TGG | - | tig0001526:161122-161141 | None:intergenic | 35.0% | |
| TACCACAAACTAACACCATA+CGG | - | tig0001526:161229-161248 | None:intergenic | 35.0% | |
| TGGTACTTCTACATGTCATA+TGG | + | tig0001526:161244-161263 | Msa1337510:CDS | 35.0% | |
| AATTGTTCATTCCTGGGATT+TGG | + | tig0001526:161282-161301 | Msa1337510:CDS | 35.0% | |
| ATTGTTCATTCCTGGGATTT+GGG | + | tig0001526:161283-161302 | Msa1337510:CDS | 35.0% | |
| ACCCAGAGTAAATAGTACAT+GGG | - | tig0001526:161406-161425 | None:intergenic | 35.0% | |
| TACCCAGAGTAAATAGTACA+TGG | - | tig0001526:161407-161426 | None:intergenic | 35.0% | |
| CATCTGACTTACTATCGAAA+AGG | - | tig0001526:161518-161537 | None:intergenic | 35.0% | |
| ATATTGGCATAGAAAGTAGG+AGG | + | tig0001526:161900-161919 | Msa1337510:intron | 35.0% | |
| ATTTGCAAGGTGTATAGAAC+CGG | - | tig0001526:162153-162172 | None:intergenic | 35.0% | |
| GAACATGTAAATCTTCAGTC+AGG | - | tig0001526:162374-162393 | None:intergenic | 35.0% | |
| ATGTTCTTCCTGACTTTCAT+GGG | + | tig0001526:162388-162407 | Msa1337510:CDS | 35.0% | |
| TATAGCAGCATATTAGTCAC+AGG | - | tig0001526:162464-162483 | None:intergenic | 35.0% | |
| !! | TTTGATTTTGGGTCTGCAAT+GGG | - | tig0001526:162504-162523 | None:intergenic | 35.0% |
| !!! | TTTTGATTTTGGGTCTGCAA+TGG | - | tig0001526:162505-162524 | None:intergenic | 35.0% |
| ATTGCAGACCCAAAATCAAA+AGG | + | tig0001526:162504-162523 | Msa1337510:CDS | 35.0% | |
| TGACACAAGTGATCAACAAT+TGG | + | tig0001526:162548-162567 | Msa1337510:CDS | 35.0% | |
| TTATTACCAGTTCTTTGGGT+TGG | + | tig0001526:162689-162708 | Msa1337510:intron | 35.0% | |
| CATAGTAAGGAACATTTCAG+TGG | - | tig0001526:162802-162821 | None:intergenic | 35.0% | |
| ATCAACACATTACTTGCATG+TGG | + | tig0001526:162964-162983 | Msa1337510:CDS | 35.0% | |
| TGTAGATAGGGTTCTTTGAT+AGG | - | tig0001526:162993-163012 | None:intergenic | 35.0% | |
| AAAGAACCCTATCTACATTC+AGG | + | tig0001526:162996-163015 | Msa1337510:CDS | 35.0% | |
| CATGTTCCTGAATGTAGATA+GGG | - | tig0001526:163005-163024 | None:intergenic | 35.0% | |
| CAGGAACATGCTGATATTAT+TGG | + | tig0001526:163015-163034 | Msa1337510:CDS | 35.0% | |
| GTTCAGTGTATAGAATGTCA+CGG | + | tig0001526:163088-163107 | Msa1337510:intron | 35.0% | |
| TATCCAAACCATAGACTACT+AGG | + | tig0001526:163277-163296 | Msa1337510:intron | 35.0% | |
| AAGAAAGACCTAGTAGTCTA+TGG | - | tig0001526:163288-163307 | None:intergenic | 35.0% | |
| AGCACCTATTGTAGAAAAGA+TGG | - | tig0001526:163445-163464 | None:intergenic | 35.0% | |
| GATAGCATTAGAGTTAGAGT+TGG | - | tig0001526:163471-163490 | None:intergenic | 35.0% | |
| ATACTAGGCGAGATAAGATT+AGG | - | tig0001526:163497-163516 | None:intergenic | 35.0% | |
| AACTGTAAGCGATGTTGTAT+GGG | - | tig0001526:163602-163621 | None:intergenic | 35.0% | |
| ! | AAGGTACCACTCAAGATAAA+GGG | - | tig0001526:163640-163659 | None:intergenic | 35.0% |
| !! | AAAGGTACCACTCAAGATAA+AGG | - | tig0001526:163641-163660 | None:intergenic | 35.0% |
| !! | GGGGGTTTTATGTGATAAAA+AGG | - | tig0001526:163659-163678 | None:intergenic | 35.0% |
| TTTATCACATAAAACCCCCA+AGG | + | tig0001526:163660-163679 | Msa1337510:intron | 35.0% | |
| TTATCACATAAAACCCCCAA+GGG | + | tig0001526:163661-163680 | Msa1337510:intron | 35.0% | |
| !! | AAGCAAGGTTGATGAAATGA+AGG | - | tig0001526:163690-163709 | None:intergenic | 35.0% |
| AACAGAGAGATGTAAACCAT+CGG | - | tig0001526:163717-163736 | None:intergenic | 35.0% | |
| !! | GGATTGGTTCGTAAAATACA+CGG | - | tig0001526:163799-163818 | None:intergenic | 35.0% |
| TTTAACCTTGAACTGTGGAT+TGG | - | tig0001526:163815-163834 | None:intergenic | 35.0% | |
| !!! | GGTTTTTTAACCTTGAACTG+TGG | - | tig0001526:163820-163839 | None:intergenic | 35.0% |
| CTTTCCCTTGGAAGAATTAT+AGG | - | tig0001526:164174-164193 | None:intergenic | 35.0% | |
| ! | GAAATATAATAGCCTTAGGG+AGG | + | tig0001526:164242-164261 | Msa1337510:CDS | 35.0% |
| TACTGGTAAGAGTGACTTTA+TGG | - | tig0001526:164380-164399 | None:intergenic | 35.0% | |
| AAAGTCACTCTTACCAGTAA+TGG | + | tig0001526:164381-164400 | Msa1337510:intron | 35.0% | |
| GAACTGATACTGCGTTATTT+AGG | - | tig0001526:164534-164553 | None:intergenic | 35.0% | |
| AACGCAGTATCAGTTCATAT+AGG | + | tig0001526:164538-164557 | Msa1337510:intron | 35.0% | |
| ACGCAGTATCAGTTCATATA+GGG | + | tig0001526:164539-164558 | Msa1337510:intron | 35.0% | |
| ATTAATTAATGCAGCCTCTC+AGG | - | tig0001526:164747-164766 | None:intergenic | 35.0% | |
| CTCACCTAATCATCTATAGA+CGG | - | tig0001526:164797-164816 | None:intergenic | 35.0% | |
| ! | TTTTCCCTGAACGACTAATA+AGG | + | tig0001526:164943-164962 | Msa1337510:intron | 35.0% |
| !! | TTCACTTTTGGATCAGTAGA+TGG | - | tig0001526:164995-165014 | None:intergenic | 35.0% |
| TAGAGAGCTGTTGTTCATAA+AGG | - | tig0001526:165054-165073 | None:intergenic | 35.0% | |
| AAGCATATATTCATGCCTTG+TGG | + | tig0001526:165176-165195 | Msa1337510:three_prime_UTR | 35.0% | |
| CTGCTAAGTATGTGACAAAA+TGG | - | tig0001526:165289-165308 | None:intergenic | 35.0% | |
| TTACTAATCACACGACCATA+CGG | - | tig0001526:165325-165344 | None:intergenic | 35.0% | |
| TGGTCGTGTGATTAGTAAAT+TGG | + | tig0001526:165327-165346 | Msa1337510:three_prime_UTR | 35.0% | |
| ATCATTCTGCTGCAAAACGA+GGG | - | tig0001526:158081-158100 | None:intergenic | 40.0% | |
| TGATGCAGGATTGTTTGATG+AGG | + | tig0001526:158351-158370 | Msa1337510:intron | 40.0% | |
| CCGATACAGATATGGAAAGA+TGG | + | tig0001526:158403-158422 | Msa1337510:CDS | 40.0% | |
| CTACTCAGTTCGAAATGTGT+TGG | + | tig0001526:158482-158501 | Msa1337510:intron | 40.0% | |
| TCACCTGTATTGGAATACTG+TGG | + | tig0001526:158900-158919 | Msa1337510:CDS | 40.0% | |
| !! | TCTAGTTCTAACGGTACCTT+TGG | - | tig0001526:158954-158973 | None:intergenic | 40.0% |
| !! | GGGACTAGTTCTAGTTCTAA+CGG | - | tig0001526:158963-158982 | None:intergenic | 40.0% |
| TAGTCCCATTATTTGACCTC+TGG | + | tig0001526:158976-158995 | Msa1337510:intron | 40.0% | |
| GTGACCAGAGGTCAAATAAT+GGG | - | tig0001526:158983-159002 | None:intergenic | 40.0% | |
| AACGAGTCTAGTAGCTTCAA+AGG | - | tig0001526:159368-159387 | None:intergenic | 40.0% | |
| TTGAAGCTACTAGACTCGTT+AGG | + | tig0001526:159368-159387 | Msa1337510:intron | 40.0% | |
| CTGGAAAGTTAGATCGTATC+GGG | - | tig0001526:159492-159511 | None:intergenic | 40.0% | |
| GCTGGAAAGTTAGATCGTAT+CGG | - | tig0001526:159493-159512 | None:intergenic | 40.0% | |
| CTCAAGTCTTCTTGATGTTC+AGG | + | tig0001526:159608-159627 | Msa1337510:intron | 40.0% | |
| ! | CTTGATGTTCAGGTTCAGTT+TGG | + | tig0001526:159618-159637 | Msa1337510:intron | 40.0% |
| TGATACAGATTCCCGAGATA+TGG | + | tig0001526:159771-159790 | Msa1337510:CDS | 40.0% | |
| !!! | GATGAGTTTTGGGAGGAAAT+TGG | + | tig0001526:159811-159830 | Msa1337510:intron | 40.0% |
| !!! | GTTTTGGGAGGAAATTGGTT+TGG | + | tig0001526:159816-159835 | Msa1337510:intron | 40.0% |
| TTGTAACACAAGAGCTGACA+TGG | + | tig0001526:160013-160032 | Msa1337510:intron | 40.0% | |
| TGTAACACAAGAGCTGACAT+GGG | + | tig0001526:160014-160033 | Msa1337510:intron | 40.0% | |
| ! | CTTTATGAGAACGATGGGTT+TGG | + | tig0001526:160054-160073 | Msa1337510:intron | 40.0% |
| !! | TTTGAACTGCTGCTTTCTTG+AGG | + | tig0001526:160842-160861 | Msa1337510:intron | 40.0% |
| !! | GGGTTGAAATTTTCAGGAAC+TGG | + | tig0001526:160995-161014 | Msa1337510:intron | 40.0% |
| TCAATCAATGATGTCCCAAC+AGG | - | tig0001526:161038-161057 | None:intergenic | 40.0% | |
| ! | TCATTGATTGATGCTCATGC+TGG | + | tig0001526:161047-161066 | Msa1337510:CDS | 40.0% |
| ACAACCTTCAGTTTCTGATG+GGG | - | tig0001526:161099-161118 | None:intergenic | 40.0% | |
| GACAACCTTCAGTTTCTGAT+GGG | - | tig0001526:161100-161119 | None:intergenic | 40.0% | |
| ! | AACCGTATGGTGTTAGTTTG+TGG | + | tig0001526:161224-161243 | Msa1337510:CDS | 40.0% |
| ! | AGGAATGAACAATTTGCTCC+GGG | - | tig0001526:161276-161295 | None:intergenic | 40.0% |
| ! | CAGGAATGAACAATTTGCTC+CGG | - | tig0001526:161277-161296 | None:intergenic | 40.0% |
| GGAGCAAATTGTTCATTCCT+GGG | + | tig0001526:161276-161295 | Msa1337510:CDS | 40.0% | |
| TTGTTCATTCCTGGGATTTG+GGG | + | tig0001526:161284-161303 | Msa1337510:CDS | 40.0% | |
| AGTAGTCTACCTGACCAAAA+CGG | - | tig0001526:161311-161330 | None:intergenic | 40.0% | |
| AGCCCATGTACTATTTACTC+TGG | + | tig0001526:161401-161420 | Msa1337510:intron | 40.0% | |
| GCCCATGTACTATTTACTCT+GGG | + | tig0001526:161402-161421 | Msa1337510:intron | 40.0% | |
| ! | CTAAACTGCGTAGTTTTCCA+TGG | - | tig0001526:161434-161453 | None:intergenic | 40.0% |
| TTTAGACGTCAGTACCACAA+TGG | + | tig0001526:161449-161468 | Msa1337510:intron | 40.0% | |
| GATAGTAAGTCAGATGCTAG+AGG | + | tig0001526:161522-161541 | Msa1337510:intron | 40.0% | |
| GGTTGGAACTTGTATCTGAA+AGG | + | tig0001526:161734-161753 | Msa1337510:intron | 40.0% | |
| CAGCAATGGTACCAGAATAT+TGG | + | tig0001526:162066-162085 | Msa1337510:intron | 40.0% | |
| CCTTCAGTAAGCCAATATTC+TGG | - | tig0001526:162080-162099 | None:intergenic | 40.0% | |
| !! | CCAGAATATTGGCTTACTGA+AGG | + | tig0001526:162077-162096 | Msa1337510:CDS | 40.0% |
| !! | GAATATTGGCTTACTGAAGG+CGG | + | tig0001526:162080-162099 | Msa1337510:CDS | 40.0% |
| !! | AATATTGGCTTACTGAAGGC+GGG | + | tig0001526:162081-162100 | Msa1337510:CDS | 40.0% |
| GAGCAGAACCAAACCTTTAT+AGG | + | tig0001526:162345-162364 | Msa1337510:CDS | 40.0% | |
| CATGTTCTTCCTGACTTTCA+TGG | + | tig0001526:162387-162406 | Msa1337510:CDS | 40.0% | |
| TTCCTGACTTTCATGGGAAT+AGG | + | tig0001526:162394-162413 | Msa1337510:CDS | 40.0% | |
| TACCTATTCCCATGAAAGTC+AGG | - | tig0001526:162399-162418 | None:intergenic | 40.0% | |
| CATCCTTACTTTGTGACCAT+GGG | - | tig0001526:162643-162662 | None:intergenic | 40.0% | |
| AAATAGCCAACCCAAAGAAC+TGG | - | tig0001526:162698-162717 | None:intergenic | 40.0% | |
| TGTTCCTTACTATGAACGTG+AGG | + | tig0001526:162808-162827 | Msa1337510:intron | 40.0% | |
| AGATCCTCACGTTCATAGTA+AGG | - | tig0001526:162815-162834 | None:intergenic | 40.0% | |
| TGTTGCCAAGTCATTACTCT+TGG | + | tig0001526:162886-162905 | Msa1337510:intron | 40.0% | |
| AACAGCCAAGAGTAATGACT+TGG | - | tig0001526:162894-162913 | None:intergenic | 40.0% | |
| AACACATTACTTGCATGTGG+AGG | + | tig0001526:162967-162986 | Msa1337510:CDS | 40.0% | |
| GCATGTTCCTGAATGTAGAT+AGG | - | tig0001526:163006-163025 | None:intergenic | 40.0% | |
| ATGCGTTATATAGGGTTGCA+TGG | + | tig0001526:163149-163168 | Msa1337510:intron | 40.0% | |
| TGCGTTATATAGGGTTGCAT+GGG | + | tig0001526:163150-163169 | Msa1337510:intron | 40.0% | |
| AGACCTAGTAGTCTATGGTT+TGG | - | tig0001526:163283-163302 | None:intergenic | 40.0% | |
| GACTACTAGGTCTTTCTTGA+TGG | + | tig0001526:163290-163309 | Msa1337510:intron | 40.0% | |
| AAGGAAAGTAGATTTGACGG+AGG | - | tig0001526:163364-163383 | None:intergenic | 40.0% | |
| TTCCTTACTACAGAATCTCC+AGG | + | tig0001526:163378-163397 | Msa1337510:intron | 40.0% | |
| AATCTCGTCTTAGGTGGTTT+GGG | - | tig0001526:163419-163438 | None:intergenic | 40.0% | |
| AGATGGTTGAATCTCGTCTT+AGG | - | tig0001526:163428-163447 | None:intergenic | 40.0% | |
| GTTGGATGTGCGAAAATACT+AGG | - | tig0001526:163512-163531 | None:intergenic | 40.0% | |
| CAAAGAAGAGAATGCTACGT+TGG | - | tig0001526:163530-163549 | None:intergenic | 40.0% | |
| CAACTGTAAGCGATGTTGTA+TGG | - | tig0001526:163603-163622 | None:intergenic | 40.0% | |
| AACTTCCCCTTTATCTTGAG+TGG | + | tig0001526:163631-163650 | Msa1337510:intron | 40.0% | |
| AGGTACCACTCAAGATAAAG+GGG | - | tig0001526:163639-163658 | None:intergenic | 40.0% | |
| TATCACATAAAACCCCCAAG+GGG | + | tig0001526:163662-163681 | Msa1337510:intron | 40.0% | |
| TAAACCATCGGATTCAAGCA+AGG | - | tig0001526:163705-163724 | None:intergenic | 40.0% | |
| GGCACAAGTATTTGAGAACT+TGG | + | tig0001526:163893-163912 | Msa1337510:intron | 40.0% | |
| TCCTATGCATCCAAATGATG+AGG | + | tig0001526:164008-164027 | Msa1337510:intron | 40.0% | |
| TCCTCATCATTTGGATGCAT+AGG | - | tig0001526:164012-164031 | None:intergenic | 40.0% | |
| CTGCCCTATAATTCTTCCAA+GGG | + | tig0001526:164167-164186 | Msa1337510:CDS | 40.0% | |
| GAAAGTGAATCTGTGCTCTT+GGG | + | tig0001526:164189-164208 | Msa1337510:CDS | 40.0% | |
| CAGTAAAGCGAGAATGAAGT+TGG | + | tig0001526:164467-164486 | Msa1337510:intron | 40.0% | |
| GTTGGAACTACCAAACTAGT+AGG | + | tig0001526:164485-164504 | Msa1337510:intron | 40.0% | |
| CGCAGTATCAGTTCATATAG+GGG | + | tig0001526:164540-164559 | Msa1337510:intron | 40.0% | |
| GGCAATTGAGTTTAGTAGCT+CGG | - | tig0001526:164822-164841 | None:intergenic | 40.0% | |
| TTAGTCGTTCAGGGAAAACT+GGG | - | tig0001526:164941-164960 | None:intergenic | 40.0% | |
| ATTAGTCGTTCAGGGAAAAC+TGG | - | tig0001526:164942-164961 | None:intergenic | 40.0% | |
| TGCACCTTATTAGTCGTTCA+GGG | - | tig0001526:164950-164969 | None:intergenic | 40.0% | |
| ATGCACCTTATTAGTCGTTC+AGG | - | tig0001526:164951-164970 | None:intergenic | 40.0% | |
| TGAACGACTAATAAGGTGCA+TGG | + | tig0001526:164950-164969 | Msa1337510:intron | 40.0% | |
| GCCAAATACAAGATATTCCG+TGG | + | tig0001526:165028-165047 | Msa1337510:CDS | 40.0% | |
| GCCACGGAATATCTTGTATT+TGG | - | tig0001526:165032-165051 | None:intergenic | 40.0% | |
| AAGGAGAATGCTTGAACAGT+TGG | + | tig0001526:165108-165127 | Msa1337510:three_prime_UTR | 40.0% | |
| CATCATTCTGCTGCAAAACG+AGG | - | tig0001526:158082-158101 | None:intergenic | 45.0% | |
| GCAGGATTGTTTGATGAGGA+AGG | + | tig0001526:158355-158374 | Msa1337510:intron | 45.0% | |
| GATGAGGAAGGAAAGCTTCT+CGG | + | tig0001526:158367-158386 | Msa1337510:CDS | 45.0% | |
| GAAAGATGGTGCCTTTGTTG+AGG | + | tig0001526:158417-158436 | Msa1337510:CDS | 45.0% | |
| !! | TGAGGTAACTTGTTTGGGAG+TGG | + | tig0001526:158435-158454 | Msa1337510:intron | 45.0% |
| ! | ACCTACAGAAGTACAGAGTC+TGG | + | tig0001526:158637-158656 | Msa1337510:CDS | 45.0% |
| ! | CCTACAGAAGTACAGAGTCT+GGG | + | tig0001526:158638-158657 | Msa1337510:CDS | 45.0% |
| TTCGCAGCTACTTGTTCACT+CGG | + | tig0001526:158662-158681 | Msa1337510:CDS | 45.0% | |
| CCACCACAGTATTCCAATAC+AGG | - | tig0001526:158906-158925 | None:intergenic | 45.0% | |
| CCTGTATTGGAATACTGTGG+TGG | + | tig0001526:158903-158922 | Msa1337510:CDS | 45.0% | |
| ACCAGAAATGCAACCACCAA+AGG | + | tig0001526:158935-158954 | Msa1337510:CDS | 45.0% | |
| ! | ACCTTTGGTGGTTGCATTTC+TGG | - | tig0001526:158939-158958 | None:intergenic | 45.0% |
| ! | AGTTCTAACGGTACCTTTGG+TGG | - | tig0001526:158951-158970 | None:intergenic | 45.0% |
| GGTGACCAGAGGTCAAATAA+TGG | - | tig0001526:158984-159003 | None:intergenic | 45.0% | |
| ! | TACACTACATTGGTGACCAG+AGG | - | tig0001526:158995-159014 | None:intergenic | 45.0% |
| ATCTGCAAGCAAATGGGACA+AGG | + | tig0001526:159100-159119 | Msa1337510:intron | 45.0% | |
| !! | CTTGGTCAATGGTTTTCAGG+TGG | + | tig0001526:159543-159562 | Msa1337510:CDS | 45.0% |
| !!! | GTCAATGGTTTTCAGGTGGA+TGG | + | tig0001526:159547-159566 | Msa1337510:CDS | 45.0% |
| ! | TGAGTGACTGGTTGTCATAC+AGG | + | tig0001526:159573-159592 | Msa1337510:CDS | 45.0% |
| !!! | TGGCTGTTTTTTAGGGCTAC+TGG | + | tig0001526:159673-159692 | Msa1337510:intron | 45.0% |
| TGACATACTGCATGTGAGCA+TGG | - | tig0001526:159750-159769 | None:intergenic | 45.0% | |
| ACCCACAAGCTTCCATATCT+CGG | - | tig0001526:159786-159805 | None:intergenic | 45.0% | |
| AGATATGGAAGCTTGTGGGT+GGG | + | tig0001526:159786-159805 | Msa1337510:intron | 45.0% | |
| ! | TGGGTGGGATGATGAGTTTT+GGG | + | tig0001526:159801-159820 | Msa1337510:intron | 45.0% |
| GGTTTGGGTGATCTTGTTGA+AGG | + | tig0001526:159832-159851 | Msa1337510:intron | 45.0% | |
| !! | GTTCAAGAGGCACTTTCATC+CGG | - | tig0001526:159984-160003 | None:intergenic | 45.0% |
| ! | TATGAGAACGATGGGTTTGG+AGG | + | tig0001526:160057-160076 | Msa1337510:intron | 45.0% |
| ! | ATGAGAACGATGGGTTTGGA+GGG | + | tig0001526:160058-160077 | Msa1337510:intron | 45.0% |
| TTGTGCCAGGAATTCCTGTT+GGG | + | tig0001526:161021-161040 | Msa1337510:CDS | 45.0% | |
| TTGATTGATGCTCATGCTGG+TGG | + | tig0001526:161050-161069 | Msa1337510:CDS | 45.0% | |
| CAACCTTCAGTTTCTGATGG+GGG | - | tig0001526:161098-161117 | None:intergenic | 45.0% | |
| GGACAACCTTCAGTTTCTGA+TGG | - | tig0001526:161101-161120 | None:intergenic | 45.0% | |
| CGTATCCTCAGAGAATGACA+AGG | + | tig0001526:161190-161209 | Msa1337510:intron | 45.0% | |
| TGCTTCCTTGTCATTCTCTG+AGG | - | tig0001526:161198-161217 | None:intergenic | 45.0% | |
| GGAAGCAATTTGCAACCGTA+TGG | + | tig0001526:161211-161230 | Msa1337510:CDS | 45.0% | |
| CATGTCATATGGCTGTATCC+CGG | + | tig0001526:161255-161274 | Msa1337510:CDS | 45.0% | |
| CGGAGCAAATTGTTCATTCC+TGG | + | tig0001526:161275-161294 | Msa1337510:CDS | 45.0% | |
| TGTTCATTCCTGGGATTTGG+GGG | + | tig0001526:161285-161304 | Msa1337510:CDS | 45.0% | |
| TTTACTCTGGGTAGCTACCA+TGG | + | tig0001526:161414-161433 | Msa1337510:intron | 45.0% | |
| !! | ACTAAGTGGGGTTGGCTATA+TGG | - | tig0001526:161656-161675 | None:intergenic | 45.0% |
| ATATAGCCAACCCCACTTAG+TGG | + | tig0001526:161655-161674 | Msa1337510:intron | 45.0% | |
| TATAGCCAACCCCACTTAGT+GGG | + | tig0001526:161656-161675 | Msa1337510:intron | 45.0% | |
| ! | AAGCCTTATCCCACTAAGTG+GGG | - | tig0001526:161668-161687 | None:intergenic | 45.0% |
| ! | CAAGCCTTATCCCACTAAGT+GGG | - | tig0001526:161669-161688 | None:intergenic | 45.0% |
| !! | GGCTTGGTTGTTGTTGTTTG+TGG | + | tig0001526:161683-161702 | Msa1337510:intron | 45.0% |
| !! | AAGTAGGAGGTATCTGACAC+TGG | + | tig0001526:161913-161932 | Msa1337510:intron | 45.0% |
| TGGACACTGAACAGGTTATC+AGG | - | tig0001526:161952-161971 | None:intergenic | 45.0% | |
| GAAGAGAATGGACACTGAAC+AGG | - | tig0001526:161960-161979 | None:intergenic | 45.0% | |
| ! | GAGTGCTACTGGTGCATTAT+TGG | + | tig0001526:162106-162125 | Msa1337510:CDS | 45.0% |
| TAGAGCTGCTTCCCAAAGTA+AGG | + | tig0001526:162172-162191 | Msa1337510:intron | 45.0% | |
| TGAGCTTCTGAACAAGCTCT+TGG | + | tig0001526:162308-162327 | Msa1337510:CDS | 45.0% | |
| TCTATACCTAGCAACTGTGC+AGG | + | tig0001526:162575-162594 | Msa1337510:CDS | 45.0% | |
| CTATACCTAGCAACTGTGCA+GGG | + | tig0001526:162576-162595 | Msa1337510:CDS | 45.0% | |
| !! | GTAGAGCATTGTAATGCCCA+TGG | + | tig0001526:162624-162643 | Msa1337510:CDS | 45.0% |
| ATGCCCATGGTCACAAAGTA+AGG | + | tig0001526:162637-162656 | Msa1337510:intron | 45.0% | |
| GCATCCTTACTTTGTGACCA+TGG | - | tig0001526:162644-162663 | None:intergenic | 45.0% | |
| CAGTGGGTGTAAACGTGAAA+TGG | - | tig0001526:162785-162804 | None:intergenic | 45.0% | |
| GACCTGGAGATTCTGTAGTA+AGG | - | tig0001526:163383-163402 | None:intergenic | 45.0% | |
| ! | TAGGTGGTTTGGGAATGTGT+GGG | - | tig0001526:163409-163428 | None:intergenic | 45.0% |
| ! | TTAGGTGGTTTGGGAATGTG+TGG | - | tig0001526:163410-163429 | None:intergenic | 45.0% |
| GAATCTCGTCTTAGGTGGTT+TGG | - | tig0001526:163420-163439 | None:intergenic | 45.0% | |
| TGGTTGAATCTCGTCTTAGG+TGG | - | tig0001526:163425-163444 | None:intergenic | 45.0% | |
| GTAAGCGATGTTGTATGGGA+CGG | - | tig0001526:163598-163617 | None:intergenic | 45.0% | |
| ATGAAATGAAGGAGCCCCTT+GGG | - | tig0001526:163679-163698 | None:intergenic | 45.0% | |
| TCAACCTTGCTTGAATCCGA+TGG | + | tig0001526:163698-163717 | Msa1337510:intron | 45.0% | |
| ACGAACCAATCCACAGTTCA+AGG | + | tig0001526:163807-163826 | Msa1337510:intron | 45.0% | |
| CACGGTGATTCCTCATCATT+TGG | - | tig0001526:164021-164040 | None:intergenic | 45.0% | |
| CAAATGATGAGGAATCACCG+TGG | + | tig0001526:164019-164038 | Msa1337510:intron | 45.0% | |
| ! | TAGACTTGTTTGACCGTCCA+CGG | - | tig0001526:164039-164058 | None:intergenic | 45.0% |
| GAAGAATTATAGGGCAGCCT+AGG | - | tig0001526:164164-164183 | None:intergenic | 45.0% | |
| GCTGCCCTATAATTCTTCCA+AGG | + | tig0001526:164166-164185 | Msa1337510:CDS | 45.0% | |
| AGCACAGATTCACTTTCCCT+TGG | - | tig0001526:164186-164205 | None:intergenic | 45.0% | |
| GGAAAGTGAATCTGTGCTCT+TGG | + | tig0001526:164188-164207 | Msa1337510:CDS | 45.0% | |
| GTGGCGCATTTACAAGACTA+TGG | - | tig0001526:164711-164730 | None:intergenic | 45.0% | |
| ! | TAAGGTGCATGGATTGTTGC+AGG | + | tig0001526:164961-164980 | Msa1337510:intron | 45.0% |
| GCTGTTGTTCATAAAGGCCA+CGG | - | tig0001526:165048-165067 | None:intergenic | 45.0% | |
| GCTCTCTAATCGTTCTGTGA+TGG | + | tig0001526:165066-165085 | Msa1337510:CDS | 45.0% | |
| TAATCGTTCTGTGATGGCTC+AGG | + | tig0001526:165072-165091 | Msa1337510:CDS | 45.0% | |
| AGCAGCATAGTGATACCGTA+TGG | + | tig0001526:165307-165326 | Msa1337510:three_prime_UTR | 45.0% | |
| AAGATGGAGCGAGAAGCAGA+AGG | - | tig0001526:158215-158234 | None:intergenic | 50.0% | |
| CTAGCAGCCCGATACAGATA+TGG | + | tig0001526:158395-158414 | Msa1337510:CDS | 50.0% | |
| !! | GGTAACTTGTTTGGGAGTGG+TGG | + | tig0001526:158438-158457 | Msa1337510:intron | 50.0% |
| CCCAGACTCTGTACTTCTGT+AGG | - | tig0001526:158641-158660 | None:intergenic | 50.0% | |
| TTCCGACAGCTCACCTGTTT+CGG | + | tig0001526:158788-158807 | Msa1337510:CDS | 50.0% | |
| AACCGAAACAGGTGAGCTGT+CGG | - | tig0001526:158793-158812 | None:intergenic | 50.0% | |
| GCTCACCTGTTTCGGTTTCT+CGG | + | tig0001526:158796-158815 | Msa1337510:CDS | 50.0% | |
| GAGCTGTAGACCAAGCTGAA+AGG | + | tig0001526:158862-158881 | Msa1337510:CDS | 50.0% | |
| ! | GGTGGATGGATTTGAGTGAC+TGG | + | tig0001526:159561-159580 | Msa1337510:CDS | 50.0% |
| TCCCGAGATATGGAAGCTTG+TGG | + | tig0001526:159781-159800 | Msa1337510:CDS | 50.0% | |
| CCCACAAGCTTCCATATCTC+GGG | - | tig0001526:159785-159804 | None:intergenic | 50.0% | |
| CCCGAGATATGGAAGCTTGT+GGG | + | tig0001526:159782-159801 | Msa1337510:CDS | 50.0% | |
| GAGATATGGAAGCTTGTGGG+TGG | + | tig0001526:159785-159804 | Msa1337510:intron | 50.0% | |
| ! | GTGGGTGGGATGATGAGTTT+TGG | + | tig0001526:159800-159819 | Msa1337510:intron | 50.0% |
| !!! | GTGGGATGATGAGTTTTGGG+AGG | + | tig0001526:159804-159823 | Msa1337510:intron | 50.0% |
| TCTCAACACGCTGTCTATGC+CGG | + | tig0001526:159962-159981 | Msa1337510:intron | 50.0% | |
| ! | TGAGAACGATGGGTTTGGAG+GGG | + | tig0001526:160059-160078 | Msa1337510:intron | 50.0% |
| TAAGGCCAGAACCCAAAGGA+TGG | - | tig0001526:160766-160785 | None:intergenic | 50.0% | |
| ATTCTTGCCTTCGCTGCAGT+AGG | - | tig0001526:160791-160810 | None:intergenic | 50.0% | |
| ACAAATTCCTGTGACGCAGC+TGG | + | tig0001526:160956-160975 | Msa1337510:intron | 50.0% | |
| ATCAAAACCAGCTGCGTCAC+AGG | - | tig0001526:160966-160985 | None:intergenic | 50.0% | |
| CTTGTGCCAGGAATTCCTGT+TGG | + | tig0001526:161020-161039 | Msa1337510:CDS | 50.0% | |
| GATGTCCCAACAGGAATTCC+TGG | - | tig0001526:161029-161048 | None:intergenic | 50.0% | |
| TTGCCCCCATCAGAAACTGA+AGG | + | tig0001526:161092-161111 | Msa1337510:CDS | 50.0% | |
| AAGTCAGATGCTAGAGGCAG+AGG | + | tig0001526:161528-161547 | Msa1337510:intron | 50.0% | |
| CTTATCCCACTAAGTGGGGT+TGG | - | tig0001526:161664-161683 | None:intergenic | 50.0% | |
| CAACCCCACTTAGTGGGATA+AGG | + | tig0001526:161662-161681 | Msa1337510:intron | 50.0% | |
| ! | CCAAGCCTTATCCCACTAAG+TGG | - | tig0001526:161670-161689 | None:intergenic | 50.0% |
| CCACTTAGTGGGATAAGGCT+TGG | + | tig0001526:161667-161686 | Msa1337510:intron | 50.0% | |
| CAAGGTGTATAGAACCGGCA+TGG | - | tig0001526:162148-162167 | None:intergenic | 50.0% | |
| GGGAAGCAGCTCTATTTGCA+AGG | - | tig0001526:162166-162185 | None:intergenic | 50.0% | |
| ! | TCAGGGCGCCTATAAAGGTT+TGG | - | tig0001526:162356-162375 | None:intergenic | 50.0% |
| ! | TTCAGTCAGGGCGCCTATAA+AGG | - | tig0001526:162361-162380 | None:intergenic | 50.0% |
| GCTGCTATATATCTTGGCCC+AGG | + | tig0001526:162475-162494 | Msa1337510:intron | 50.0% | |
| !! | ACTGTGCAGGGCATTGCATA+TGG | + | tig0001526:162588-162607 | Msa1337510:CDS | 50.0% |
| !! | GCTGTTGATGCAGCGTTGAT+GGG | + | tig0001526:162908-162927 | Msa1337510:intron | 50.0% |
| GGTTGCATGGGTGTCTAGTT+TGG | + | tig0001526:163162-163181 | Msa1337510:intron | 50.0% | |
| CAACCAAGCCTTAACCCACT+AGG | + | tig0001526:163197-163216 | Msa1337510:intron | 50.0% | |
| CAAGCCTTAACCCACTAGGT+GGG | + | tig0001526:163201-163220 | Msa1337510:intron | 50.0% | |
| AAGCCTTAACCCACTAGGTG+GGG | + | tig0001526:163202-163221 | Msa1337510:intron | 50.0% | |
| TTTAGCCAACCCCACCTAGT+GGG | - | tig0001526:163214-163233 | None:intergenic | 50.0% | |
| ATTTAGCCAACCCCACCTAG+TGG | - | tig0001526:163215-163234 | None:intergenic | 50.0% | |
| TGTTCGTTGTCCTTTGCCTC+TGG | + | tig0001526:163326-163345 | Msa1337510:intron | 50.0% | |
| TGTCCTTTGCCTCTGGCAAT+TGG | + | tig0001526:163333-163352 | Msa1337510:intron | 50.0% | |
| GTCCTTTGCCTCTGGCAATT+GGG | + | tig0001526:163334-163353 | Msa1337510:intron | 50.0% | |
| AACCCAATTGCCAGAGGCAA+AGG | - | tig0001526:163339-163358 | None:intergenic | 50.0% | |
| GAGGATAACCCAATTGCCAG+AGG | - | tig0001526:163345-163364 | None:intergenic | 50.0% | |
| ! | AGGTGGTTTGGGAATGTGTG+GGG | - | tig0001526:163408-163427 | None:intergenic | 50.0% |
| ! | GTTGTATGGGACGGAGCATT+GGG | - | tig0001526:163589-163608 | None:intergenic | 50.0% |
| TGTTGTATGGGACGGAGCAT+TGG | - | tig0001526:163590-163609 | None:intergenic | 50.0% | |
| TGAAATGAAGGAGCCCCTTG+GGG | - | tig0001526:163678-163697 | None:intergenic | 50.0% | |
| GATGAAATGAAGGAGCCCCT+TGG | - | tig0001526:163680-163699 | None:intergenic | 50.0% | |
| TGATGAGGAATCACCGTGGA+CGG | + | tig0001526:164023-164042 | Msa1337510:intron | 50.0% | |
| !! | CTCTTGGGTGCTGCTATTCT+GGG | + | tig0001526:164204-164223 | Msa1337510:CDS | 50.0% |
| AGCTGCATTCAGGGCTTTCA+TGG | - | tig0001526:164268-164287 | None:intergenic | 50.0% | |
| ATGAAAGCCCTGAATGCAGC+TGG | + | tig0001526:164267-164286 | Msa1337510:CDS | 50.0% | |
| ! | AGTCTTGTAAATGCGCCACC+AGG | + | tig0001526:164712-164731 | Msa1337510:intron | 50.0% |
| ! | CGAGAAGCAGAAGGTTCGGT+GGG | - | tig0001526:158206-158225 | None:intergenic | 55.0% |
| GGAGCGAGAAGCAGAAGGTT+CGG | - | tig0001526:158210-158229 | None:intergenic | 55.0% | |
| GCTTCTCGCTCCATCTTCCT+CGG | + | tig0001526:158218-158237 | Msa1337510:CDS | 55.0% | |
| CCACTCCGAGAAACCGAAAC+AGG | - | tig0001526:158804-158823 | None:intergenic | 55.0% | |
| CCTGTTTCGGTTTCTCGGAG+TGG | + | tig0001526:158801-158820 | Msa1337510:CDS | 55.0% | |
| ! | GAGAACGATGGGTTTGGAGG+GGG | + | tig0001526:160060-160079 | Msa1337510:intron | 55.0% |
| GTGCAGATGCATGCTCGTGT+AGG | - | tig0001526:160233-160252 | None:intergenic | 55.0% | |
| ATGCTCGACCGGTCGAAACT+TGG | + | tig0001526:160622-160641 | Msa1337510:intron | 55.0% | |
| TGCTCGACCGGTCGAAACTT+GGG | + | tig0001526:160623-160642 | Msa1337510:intron | 55.0% | |
| GCTTTCCCTGGCCATCCTTT+GGG | + | tig0001526:160752-160771 | Msa1337510:CDS | 55.0% | |
| CAGAACCCAAAGGATGGCCA+GGG | - | tig0001526:160760-160779 | None:intergenic | 55.0% | |
| GGAGTAAGGCCAGAACCCAA+AGG | - | tig0001526:160770-160789 | None:intergenic | 55.0% | |
| CCTTCGCTGCAGTAGGAGTA+AGG | - | tig0001526:160784-160803 | None:intergenic | 55.0% | |
| CCTTACTCCTACTGCAGCGA+AGG | + | tig0001526:160781-160800 | Msa1337510:CDS | 55.0% | |
| !! | ATTTGGGGGCCGTTTTGGTC+AGG | + | tig0001526:161299-161318 | Msa1337510:CDS | 55.0% |
| CAATGCCCTGCACAGTTGCT+AGG | - | tig0001526:162584-162603 | None:intergenic | 55.0% | |
| ! | GGCTGTTGATGCAGCGTTGA+TGG | + | tig0001526:162907-162926 | Msa1337510:intron | 55.0% |
| !! | CCACCTAGTGGGTTAAGGCT+TGG | - | tig0001526:163203-163222 | None:intergenic | 55.0% |
| CCAAGCCTTAACCCACTAGG+TGG | + | tig0001526:163200-163219 | Msa1337510:intron | 55.0% | |
| !! | CAACCCCACCTAGTGGGTTA+AGG | - | tig0001526:163208-163227 | None:intergenic | 55.0% |
| CTTAACCCACTAGGTGGGGT+TGG | + | tig0001526:163206-163225 | Msa1337510:intron | 55.0% | |
| GAAATGAAGGAGCCCCTTGG+GGG | - | tig0001526:163677-163696 | None:intergenic | 55.0% | |
| !! | GCTCTTGGGTGCTGCTATTC+TGG | + | tig0001526:164203-164222 | Msa1337510:CDS | 55.0% |
| CACCTGACCAGCTGCATTCA+GGG | - | tig0001526:164277-164296 | None:intergenic | 55.0% | |
| ACACCTGACCAGCTGCATTC+AGG | - | tig0001526:164278-164297 | None:intergenic | 55.0% | |
| TGAATGCAGCTGGTCAGGTG+TGG | + | tig0001526:164277-164296 | Msa1337510:intron | 55.0% | |
| TTCTGTGATGGCTCAGGCGT+TGG | + | tig0001526:165078-165097 | Msa1337510:CDS | 55.0% | |
| !! | CTCAGGCGTTGGCATAGCAA+AGG | + | tig0001526:165089-165108 | Msa1337510:exon | 55.0% |
| !! | AGCAGAAGGTTCGGTGGGTG+AGG | - | tig0001526:158201-158220 | None:intergenic | 60.0% |
| GCGAGAAGCAGAAGGTTCGG+TGG | - | tig0001526:158207-158226 | None:intergenic | 60.0% | |
| !! | ATCTTCCTCGGCGTCGACGT+CGG | + | tig0001526:158230-158249 | Msa1337510:CDS | 60.0% |
| ! | AACGATGGGTTTGGAGGGGG+TGG | + | tig0001526:160063-160082 | Msa1337510:intron | 60.0% |
| ! | ACGATGGGTTTGGAGGGGGT+GGG | + | tig0001526:160064-160083 | Msa1337510:intron | 60.0% |
| GCTCGACCGGTCGAAACTTG+GGG | + | tig0001526:160624-160643 | Msa1337510:intron | 60.0% | |
| AGCCTGCCCCAAGTTTCGAC+CGG | - | tig0001526:160633-160652 | None:intergenic | 60.0% | |
| CGCTTTCCCTGGCCATCCTT+TGG | + | tig0001526:160751-160770 | Msa1337510:CDS | 60.0% | |
| CCAGAACCCAAAGGATGGCC+AGG | - | tig0001526:160761-160780 | None:intergenic | 60.0% | |
| ! | CCTGGCCATCCTTTGGGTTC+TGG | + | tig0001526:160758-160777 | Msa1337510:CDS | 60.0% |
| ! | CAGGAACTGGGTCTTGTGCC+AGG | + | tig0001526:161008-161027 | Msa1337510:intron | 60.0% |
| ! | TGATGCTCATGCTGGTGGCG+TGG | + | tig0001526:161055-161074 | Msa1337510:CDS | 60.0% |
| ! | GATGCTCATGCTGGTGGCGT+GGG | + | tig0001526:161056-161075 | Msa1337510:CDS | 60.0% |
| ! | ATGCTCATGCTGGTGGCGTG+GGG | + | tig0001526:161057-161076 | Msa1337510:CDS | 60.0% |
| CAAAACGGCCCCCAAATCCC+AGG | - | tig0001526:161296-161315 | None:intergenic | 60.0% | |
| ! | CTGGGATTTGGGGGCCGTTT+TGG | + | tig0001526:161294-161313 | Msa1337510:CDS | 60.0% |
| GGGTCTGCAATGGGAGACCT+GGG | - | tig0001526:162495-162514 | None:intergenic | 60.0% | |
| TGGGTCTGCAATGGGAGACC+TGG | - | tig0001526:162496-162515 | None:intergenic | 60.0% | |
| GGGAATGTGTGGGGTAGACC+TGG | - | tig0001526:163399-163418 | None:intergenic | 60.0% | |
| !! | GTATGGGACGGAGCATTGGG+CGG | - | tig0001526:163586-163605 | None:intergenic | 60.0% |
| GGGCTTTCATGGCCTCCCTA+AGG | - | tig0001526:164257-164276 | None:intergenic | 60.0% | |
| AGCCCTGAATGCAGCTGGTC+AGG | + | tig0001526:164272-164291 | Msa1337510:CDS | 60.0% | |
| !! | GGTTCGGTGGGTGAGGCCAT+CGG | - | tig0001526:158194-158213 | None:intergenic | 65.0% |
| GACGTCGACGCCGAGGAAGA+TGG | - | tig0001526:158231-158250 | None:intergenic | 65.0% | |
| ! | CGATGGGTTTGGAGGGGGTG+GGG | + | tig0001526:160065-160084 | Msa1337510:intron | 65.0% |
| ! | GATGGGTTTGGAGGGGGTGG+GGG | + | tig0001526:160066-160085 | Msa1337510:intron | 65.0% |
| GACCGGTCGAAACTTGGGGC+AGG | + | tig0001526:160628-160647 | Msa1337510:intron | 65.0% | |
| !! | GGGCGAAGTGTCGCTTTCCC+TGG | + | tig0001526:160740-160759 | Msa1337510:intron | 65.0% |
| ! | TGCTCATGCTGGTGGCGTGG+GGG | + | tig0001526:161058-161077 | Msa1337510:CDS | 65.0% |
| ! | GAAGGCGGGCAGAGTGCTAC+TGG | + | tig0001526:162095-162114 | Msa1337510:CDS | 65.0% |
| CTCAGGCTTGCACTGCCTGG+TGG | - | tig0001526:164730-164749 | None:intergenic | 65.0% | |
| CCTCTCAGGCTTGCACTGCC+TGG | - | tig0001526:164733-164752 | None:intergenic | 65.0% | |
| CCAGGCAGTGCAAGCCTGAG+AGG | + | tig0001526:164730-164749 | Msa1337510:intron | 65.0% | |
| GGTTTGGAGGGGGTGGGGGT+GGG | + | tig0001526:160070-160089 | Msa1337510:intron | 70.0% | |
| !! | CTCGGCGTCGACGTCGGCAC+CGG | + | tig0001526:158236-158255 | Msa1337510:CDS | 75.0% |
| ! | TGGACCAGCGCGAGCGCTGC+CGG | - | tig0001526:158258-158277 | None:intergenic | 75.0% |
| GGGTTTGGAGGGGGTGGGGG+TGG | + | tig0001526:160069-160088 | Msa1337510:intron | 75.0% | |
| !!! | CGGTGCCGACGTCGACGCCG+AGG | - | tig0001526:158238-158257 | None:intergenic | 80.0% |
| !!! | GGCACCGGCAGCGCTCGCGC+TGG | + | tig0001526:158251-158270 | Msa1337510:CDS | 85.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| tig0001526 | gene | 158054 | 165393 | 158054 | ID=Msa1337510;Name=Msa1337510 |
| tig0001526 | mRNA | 158054 | 165393 | 158054 | ID=Msa1337510-mRNA-1;Parent=Msa1337510;Name=Msa1337510-mRNA-1;_AED=0.11;_eAED=0.11;_QI=140|0.85|0.86|1|1|1|15|288|566 |
| tig0001526 | exon | 158054 | 158272 | 158054 | ID=Msa1337510-mRNA-1:exon:1130;Parent=Msa1337510-mRNA-1 |
| tig0001526 | exon | 158359 | 158438 | 158359 | ID=Msa1337510-mRNA-1:exon:1131;Parent=Msa1337510-mRNA-1 |
| tig0001526 | exon | 158566 | 158683 | 158566 | ID=Msa1337510-mRNA-1:exon:1132;Parent=Msa1337510-mRNA-1 |
| tig0001526 | exon | 158778 | 158956 | 158778 | ID=Msa1337510-mRNA-1:exon:1133;Parent=Msa1337510-mRNA-1 |
| tig0001526 | exon | 159512 | 159594 | 159512 | ID=Msa1337510-mRNA-1:exon:1134;Parent=Msa1337510-mRNA-1 |
| tig0001526 | exon | 159687 | 159803 | 159687 | ID=Msa1337510-mRNA-1:exon:1135;Parent=Msa1337510-mRNA-1 |
| tig0001526 | exon | 160741 | 160840 | 160741 | ID=Msa1337510-mRNA-1:exon:1136;Parent=Msa1337510-mRNA-1 |
| tig0001526 | exon | 161011 | 161113 | 161011 | ID=Msa1337510-mRNA-1:exon:1137;Parent=Msa1337510-mRNA-1 |
| tig0001526 | exon | 161201 | 161320 | 161201 | ID=Msa1337510-mRNA-1:exon:1138;Parent=Msa1337510-mRNA-1 |
| tig0001526 | exon | 162069 | 162188 | 162069 | ID=Msa1337510-mRNA-1:exon:1139;Parent=Msa1337510-mRNA-1 |
| tig0001526 | exon | 162295 | 162415 | 162295 | ID=Msa1337510-mRNA-1:exon:1140;Parent=Msa1337510-mRNA-1 |
| tig0001526 | exon | 162497 | 162653 | 162497 | ID=Msa1337510-mRNA-1:exon:1141;Parent=Msa1337510-mRNA-1 |
| tig0001526 | exon | 162964 | 163036 | 162964 | ID=Msa1337510-mRNA-1:exon:1142;Parent=Msa1337510-mRNA-1 |
| tig0001526 | exon | 164166 | 164293 | 164166 | ID=Msa1337510-mRNA-1:exon:1143;Parent=Msa1337510-mRNA-1 |
| tig0001526 | exon | 164983 | 165393 | 164983 | ID=Msa1337510-mRNA-1:exon:1144;Parent=Msa1337510-mRNA-1 |
| tig0001526 | five_prime_UTR | 158054 | 158193 | 158054 | ID=Msa1337510-mRNA-1:five_prime_utr;Parent=Msa1337510-mRNA-1 |
| tig0001526 | CDS | 158194 | 158272 | 158194 | ID=Msa1337510-mRNA-1:cds;Parent=Msa1337510-mRNA-1 |
| tig0001526 | CDS | 158359 | 158438 | 158359 | ID=Msa1337510-mRNA-1:cds;Parent=Msa1337510-mRNA-1 |
| tig0001526 | CDS | 158566 | 158683 | 158566 | ID=Msa1337510-mRNA-1:cds;Parent=Msa1337510-mRNA-1 |
| tig0001526 | CDS | 158778 | 158956 | 158778 | ID=Msa1337510-mRNA-1:cds;Parent=Msa1337510-mRNA-1 |
| tig0001526 | CDS | 159512 | 159594 | 159512 | ID=Msa1337510-mRNA-1:cds;Parent=Msa1337510-mRNA-1 |
| tig0001526 | CDS | 159687 | 159803 | 159687 | ID=Msa1337510-mRNA-1:cds;Parent=Msa1337510-mRNA-1 |
| tig0001526 | CDS | 160741 | 160840 | 160741 | ID=Msa1337510-mRNA-1:cds;Parent=Msa1337510-mRNA-1 |
| tig0001526 | CDS | 161011 | 161113 | 161011 | ID=Msa1337510-mRNA-1:cds;Parent=Msa1337510-mRNA-1 |
| tig0001526 | CDS | 161201 | 161320 | 161201 | ID=Msa1337510-mRNA-1:cds;Parent=Msa1337510-mRNA-1 |
| tig0001526 | CDS | 162069 | 162188 | 162069 | ID=Msa1337510-mRNA-1:cds;Parent=Msa1337510-mRNA-1 |
| tig0001526 | CDS | 162295 | 162415 | 162295 | ID=Msa1337510-mRNA-1:cds;Parent=Msa1337510-mRNA-1 |
| tig0001526 | CDS | 162497 | 162653 | 162497 | ID=Msa1337510-mRNA-1:cds;Parent=Msa1337510-mRNA-1 |
| tig0001526 | CDS | 162964 | 163036 | 162964 | ID=Msa1337510-mRNA-1:cds;Parent=Msa1337510-mRNA-1 |
| tig0001526 | CDS | 164166 | 164293 | 164166 | ID=Msa1337510-mRNA-1:cds;Parent=Msa1337510-mRNA-1 |
| tig0001526 | CDS | 164983 | 165105 | 164983 | ID=Msa1337510-mRNA-1:cds;Parent=Msa1337510-mRNA-1 |
| tig0001526 | three_prime_UTR | 165106 | 165393 | 165106 | ID=Msa1337510-mRNA-1:three_prime_utr;Parent=Msa1337510-mRNA-1 |
| Gene Sequence |
| Protein sequence |
