AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa1358690

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa1358690 MtrunA17_Chr5g0401171 78.095 315 16 2 1 262 1 315 1.74e-173 480
Msa1358690 MtrunA17_Chr4g0054041 52.903 310 86 5 1 262 1 298 6.93e-101 296
Msa1358690 MtrunA17_Chr7g0253331 50.244 205 59 1 99 260 1 205 2.08e-70 215
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa1358690 AT2G14750.1 55.189 212 54 2 92 262 65 276 1.47e-77 236
Msa1358690 AT3G03900.2 53.883 206 52 1 99 261 1 206 6.29e-73 222
Msa1358690 AT3G03900.1 53.883 206 52 1 99 261 1 206 6.29e-73 222
Msa1358690 AT4G39940.1 55.500 200 45 1 105 260 92 291 2.36e-71 221
Msa1358690 AT5G67520.3 72.519 131 36 0 102 232 83 213 4.42e-71 219
Msa1358690 AT5G67520.2 72.519 131 36 0 102 232 83 213 4.42e-71 219
Msa1358690 AT5G67520.1 72.519 131 36 0 102 232 83 213 4.38e-70 218
Msa1358690 AT3G03900.3 73.282 131 35 0 99 229 1 131 1.77e-68 208

Find 78 sgRNAs with CRISPR-Local

Find 328 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
GGCTGTGTCGTTTGGGTAAC+TGG 0.264792 tig0016374:-12161 Msa1358690:CDS
GTTGCTGTCTATCAAGCTTC+TGG 0.282023 tig0016374:+12198 None:intergenic
TGCAAGCATCTCTATCCTTT+TGG 0.283640 tig0016374:+10634 None:intergenic
ATTAATATGATCTTATCTTT+TGG 0.300331 tig0016374:-8663 Msa1358690:three_prime_UTR
AATACTTGATGTTACTTTGC+TGG 0.317044 tig0016374:-8508 Msa1358690:three_prime_UTR
TACCTCAATAAAATCTCCTT+TGG 0.326099 tig0016374:+10599 None:intergenic
GTGTCTTTCTTGTTTGTTGT+AGG 0.327041 tig0016374:-8905 Msa1358690:three_prime_UTR
ACAGAAATTCCCCTGTATTT+CGG 0.327349 tig0016374:+13507 None:intergenic
AAGTTCCGCATTCGATGTTC+TGG 0.330014 tig0016374:+13673 None:intergenic
ACTTCGACGGCGGAGAAGTT+AGG 0.339004 tig0016374:-13654 Msa1358690:CDS
CAGCAACTACTTCAACAAAA+AGG 0.364083 tig0016374:-12182 Msa1358690:CDS
AAAAGGATAGAGATGCTTGC+AGG 0.370037 tig0016374:-10632 Msa1358690:CDS
GTAACTGGTCTCAGCGGTTC+AGG 0.370998 tig0016374:-12146 Msa1358690:intron
CTCAGCAATTTGACAACAAA+TGG 0.397415 tig0016374:-12257 Msa1358690:CDS
ATCATTGTTCACTATGCATC+TGG 0.420661 tig0016374:-8826 Msa1358690:three_prime_UTR
ATGCTGCTATTTCCAGTGAC+TGG 0.440926 tig0016374:+8565 None:intergenic
GGGGAATTTCTGTGAATAAA+CGG 0.448574 tig0016374:-13497 Msa1358690:CDS
GTAACAGAATTCCGAAATAC+AGG 0.451180 tig0016374:-13518 Msa1358690:CDS
ACCTCAATAAAATCTCCTTT+GGG 0.452103 tig0016374:+10600 None:intergenic
GCCTTCATTACATCAGTAAG+TGG 0.458142 tig0016374:-8767 Msa1358690:three_prime_UTR
AAGTTAACATATATCCTTGA+TGG 0.466938 tig0016374:-10883 Msa1358690:CDS
TGATCAATGAAAGATGAATC+AGG 0.467437 tig0016374:+13456 None:intergenic
TGCTCCTCTTTCGCCGTGAT+CGG 0.469600 tig0016374:+13564 None:intergenic
CCGGATGCATGTGGCTTGGA+TGG 0.479219 tig0016374:+8801 None:intergenic
GGTGAGGAAGGAGCTGGTCT+TGG 0.479373 tig0016374:-8736 Msa1358690:three_prime_UTR
GCTAAACTCTTGGCAGATGC+AGG 0.488790 tig0016374:-10690 Msa1358690:CDS
ATATCCTACTTGGAGAAGAA+TGG 0.491660 tig0016374:-8957 Msa1358690:CDS
TATCCTACTTGGAGAAGAAT+GGG 0.491666 tig0016374:-8956 Msa1358690:CDS
CCATCCAAGCCACATGCATC+CGG 0.493820 tig0016374:-8801 Msa1358690:three_prime_UTR
ACAATGATTTCCTTGCTGCT+TGG 0.501540 tig0016374:+8841 None:intergenic
TCCACTTACTGATGTAATGA+AGG 0.508751 tig0016374:+8766 None:intergenic
GACACCGTTCAAGCATCGTC+AGG 0.513990 tig0016374:+8923 None:intergenic
TTGGTATGGTGATATCAAAC+TGG 0.514639 tig0016374:+10653 None:intergenic
CGGGCCTGACGATGCTTGAA+CGG 0.515243 tig0016374:-8927 Msa1358690:exon
ATCTATCTACAACCAGTCAC+TGG 0.515355 tig0016374:-8577 Msa1358690:three_prime_UTR
TCAAGCATCGTCAGGCCCGC+AGG 0.516787 tig0016374:+8931 None:intergenic
CTGCAGCCACAGTGTGGTGG+TGG 0.519914 tig0016374:-13702 Msa1358690:CDS
AGGAAGGAGCTGGTCTTGGT+TGG 0.524092 tig0016374:-8732 Msa1358690:three_prime_UTR
GAATAATTAGCAGAACATCA+AGG 0.527956 tig0016374:+8473 None:intergenic
TTTGATATCACCATACCAAA+AGG 0.528738 tig0016374:-10649 Msa1358690:CDS
TGGCAAACAAATGCTTCTTG+TGG 0.532487 tig0016374:-8643 Msa1358690:three_prime_UTR
AAGTTTGTTGAAGCCGATCA+CGG 0.535327 tig0016374:-13577 Msa1358690:CDS
GTCGAATATTATCACCATCA+AGG 0.540627 tig0016374:+10869 None:intergenic
ATGAAGGCATAAATACAATC+CGG 0.540704 tig0016374:+8782 None:intergenic
GAAGCCGATCACGGCGAAAG+AGG 0.545427 tig0016374:-13568 Msa1358690:CDS
TCAGAGAACATACGAAGGAT+TGG 0.546139 tig0016374:-10805 Msa1358690:intron
TGTAGATAGATATGTTACAT+TGG 0.547198 tig0016374:+8589 None:intergenic
CATCGAATGCGGAACTTCGA+CGG 0.558793 tig0016374:-13667 Msa1358690:CDS
CTGCTCTAAAACTAAGATCA+CGG 0.567587 tig0016374:+10836 None:intergenic
GAATCGTTTATTGTTGATGA+CGG 0.567893 tig0016374:-13540 Msa1358690:CDS
CAATCCGGATGCATGTGGCT+TGG 0.569787 tig0016374:+8797 None:intergenic
GTGGAGTGGATCGGTGAGGA+AGG 0.573653 tig0016374:-8748 Msa1358690:three_prime_UTR
AATAATTAGCAGAACATCAA+GGG 0.574500 tig0016374:+8474 None:intergenic
AGGTGAAGTAGCTAAACTCT+TGG 0.578494 tig0016374:-10700 Msa1358690:CDS
AAAGGATAGAGATGCTTGCA+GGG 0.582569 tig0016374:-10631 Msa1358690:CDS
TAACAGAATTCCGAAATACA+GGG 0.585497 tig0016374:-13517 Msa1358690:CDS
GGAGAAGAATGGGTACCTGC+GGG 0.591894 tig0016374:-8946 Msa1358690:CDS
AGTCGAAGCTTGCACTCGAG+AGG 0.595301 tig0016374:-10907 Msa1358690:CDS
GTACCCATTCTTCTCCAAGT+AGG 0.597668 tig0016374:+8953 None:intergenic
AACTGCTTCTCCAAGCAGCA+AGG 0.597930 tig0016374:-8851 Msa1358690:three_prime_UTR
TAATTGTTCAAAGCAGAACT+CGG 0.598029 tig0016374:+8449 None:intergenic
GTTACTTTGCTGGTATAATG+AGG 0.600320 tig0016374:-8498 Msa1358690:three_prime_UTR
CATCAGTAAGTGGAGTGGAT+CGG 0.603774 tig0016374:-8757 Msa1358690:three_prime_UTR
TGGATCGGTGAGGAAGGAGC+TGG 0.610942 tig0016374:-8742 Msa1358690:three_prime_UTR
CATTACATCAGTAAGTGGAG+TGG 0.618140 tig0016374:-8762 Msa1358690:three_prime_UTR
TGGAGAAGAATGGGTACCTG+CGG 0.627754 tig0016374:-8947 Msa1358690:CDS
TGCAGGGCTCTACTGCCCAA+AGG 0.632424 tig0016374:-10615 Msa1358690:CDS
AAATACAATCCGGATGCATG+TGG 0.647441 tig0016374:+8792 None:intergenic
CTGTATGTCTCCAAGTAATG+CGG 0.676662 tig0016374:-8991 Msa1358690:CDS
GATGGTGATAATATTCGACA+TGG 0.683288 tig0016374:-10865 Msa1358690:CDS
CGAATGCGGAACTTCGACGG+CGG 0.687952 tig0016374:-13664 Msa1358690:CDS
ATCGTTCAGAGAACATACGA+AGG 0.694484 tig0016374:-10810 Msa1358690:CDS
GTTTGGGTAACTGGTCTCAG+CGG 0.695742 tig0016374:-12152 Msa1358690:CDS
AACAGAATTCCGAAATACAG+GGG 0.699949 tig0016374:-13516 Msa1358690:CDS
GCACTGCAGCCACAGTGTGG+TGG 0.709496 tig0016374:-13705 Msa1358690:CDS
CAAGCACTGCAGCCACAGTG+TGG 0.727033 tig0016374:-13708 Msa1358690:CDS
GTAAGTGGAGTGGATCGGTG+AGG 0.727554 tig0016374:-8752 Msa1358690:three_prime_UTR
AAAATTCCACCACCACACTG+TGG 0.729351 tig0016374:+13696 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!!! TTAGTTTAGTTTTTTTTTTT+TGG - tig0016374:11831-11850 Msa1358690:intron 10.0%
!! GATAATAAGTTAGTTAATAA+CGG - tig0016374:9130-9149 Msa1358690:intron 15.0%
!!! AAATTAAGTTGTTTATTATG+AGG + tig0016374:9507-9526 None:intergenic 15.0%
!! ATACATTAAAAACTGATAAA+AGG + tig0016374:10178-10197 None:intergenic 15.0%
!! TATTCATGTGAAATTAAAAT+TGG - tig0016374:10844-10863 Msa1358690:CDS 15.0%
!! GATATTTGTTCAAAAAAAAA+AGG + tig0016374:11143-11162 None:intergenic 15.0%
!! AATTGCTCAAAAAATATTAA+GGG + tig0016374:11907-11926 None:intergenic 15.0%
!! AAATTGCTCAAAAAATATTA+AGG + tig0016374:11908-11927 None:intergenic 15.0%
!! AAATATTATTGTTGCTAAAA+AGG - tig0016374:13001-13020 Msa1358690:intron 15.0%
!!! ATTAATATGATCTTATCTTT+TGG - tig0016374:13512-13531 Msa1358690:CDS 15.0%
!!! TATTCGTTTTATCTATTGAA+AGG + tig0016374:9073-9092 None:intergenic 20.0%
!! AGATAAAACGAATAAGAATT+AGG - tig0016374:9079-9098 Msa1358690:intron 20.0%
!! AAATTGAAAGCAATAAACTA+TGG + tig0016374:10104-10123 None:intergenic 20.0%
!!! TATCAGTTTTTAATGTATCT+AGG - tig0016374:10180-10199 Msa1358690:intron 20.0%
!! TACTAGAAAAAAAAATTGCA+GGG + tig0016374:10480-10499 None:intergenic 20.0%
!! AAAATATAGATTTCAGTTAG+CGG + tig0016374:10773-10792 None:intergenic 20.0%
!! TTAAATCTTTCATAACAACT+TGG + tig0016374:10965-10984 None:intergenic 20.0%
!! CATAAACAAAATAGCAAAAA+AGG + tig0016374:11427-11446 None:intergenic 20.0%
!! ATTGCACAATTTAAAAACTT+GGG + tig0016374:11877-11896 None:intergenic 20.0%
!! AATTGCACAATTTAAAAACT+TGG + tig0016374:11878-11897 None:intergenic 20.0%
!!! GTTTTTAAATTGTGCAATTT+TGG - tig0016374:11879-11898 Msa1358690:intron 20.0%
!! ATTGCTCAAAAAATATTAAG+GGG + tig0016374:11906-11925 None:intergenic 20.0%
!! AATTCTTAATTGCATTGAAT+TGG + tig0016374:12128-12147 None:intergenic 20.0%
!! AAAATTGCTCAAAAAAAACT+AGG - tig0016374:12670-12689 Msa1358690:intron 20.0%
!! AAATTGCTCAAAAAAAACTA+GGG - tig0016374:12671-12690 Msa1358690:intron 20.0%
! GATAAATTCAGATTCAGATT+CGG + tig0016374:8944-8963 None:intergenic 25.0%
! AATCTGAATTTATCGTTTCA+GGG - tig0016374:8950-8969 Msa1358690:CDS 25.0%
!!! TTTTGAAAAGAAGCTTGAAA+TGG - tig0016374:8996-9015 Msa1358690:CDS 25.0%
! CTAATTGAATTTGTAGTGTT+TGG - tig0016374:9191-9210 Msa1358690:intron 25.0%
!! TAATGTATCTAGGATTTCAT+TGG - tig0016374:10190-10209 Msa1358690:intron 25.0%
! TTCATCATATCATTTCTATC+AGG + tig0016374:10446-10465 None:intergenic 25.0%
! GTACTAGAAAAAAAAATTGC+AGG + tig0016374:10481-10500 None:intergenic 25.0%
! TAACTACGTACTCTATAATA+TGG + tig0016374:10716-10735 None:intergenic 25.0%
!!! CAAGTTCCACTTTTAATTTA+CGG - tig0016374:10801-10820 Msa1358690:intron 25.0%
! TATAAGCCGTAAATTAAAAG+TGG + tig0016374:10810-10829 None:intergenic 25.0%
!!! ACAGCTTCATTTTTATGTTT+CGG + tig0016374:10884-10903 None:intergenic 25.0%
!!! TATACTTAGACATTGATTTC+AGG - tig0016374:11220-11239 Msa1358690:intron 25.0%
! AAGTTAACATATATCCTTGA+TGG - tig0016374:11292-11311 Msa1358690:intron 25.0%
! TTGCACAATTTAAAAACTTG+GGG + tig0016374:11876-11895 None:intergenic 25.0%
! AAACAAATCAAACCACATAT+GGG + tig0016374:11975-11994 None:intergenic 25.0%
! AAAACAAATCAAACCACATA+TGG + tig0016374:11976-11995 None:intergenic 25.0%
!!! GATTTGTTTTAAGTCTATGA+TGG - tig0016374:11986-12005 Msa1358690:intron 25.0%
!!! TGATTTTTGGTTGATGAATA+CGG - tig0016374:12458-12477 Msa1358690:intron 25.0%
! AATTGCTCAAAAAAAACTAG+GGG - tig0016374:12672-12691 Msa1358690:intron 25.0%
!! GTTTTCAAATTGTGCAATTT+TGG + tig0016374:12700-12719 None:intergenic 25.0%
! AATTGCACAATTTGAAAACA+TGG - tig0016374:12701-12720 Msa1358690:intron 25.0%
! ATTGCACAATTTGAAAACAT+GGG - tig0016374:12702-12721 Msa1358690:intron 25.0%
!!! CTTTTTTTTTATTTGCATCG+CGG - tig0016374:12746-12765 Msa1358690:intron 25.0%
! AGCATAATACATAGAATAGA+AGG + tig0016374:12788-12807 None:intergenic 25.0%
! CCAAATAGATAATTCAATAC+TGG + tig0016374:12899-12918 None:intergenic 25.0%
!! CCAGTATTGAATTATCTATT+TGG - tig0016374:12896-12915 Msa1358690:intron 25.0%
! AGAAAAAGTAATATCCTACT+TGG - tig0016374:13208-13227 Msa1358690:intron 25.0%
! TGTAGATAGATATGTTACAT+TGG + tig0016374:13589-13608 None:intergenic 25.0%
! AATAATTAGCAGAACATCAA+GGG + tig0016374:13704-13723 None:intergenic 25.0%
! GAATCGTTTATTGTTGATGA+CGG - tig0016374:8635-8654 Msa1358690:three_prime_UTR 30.0%
TAACAGAATTCCGAAATACA+GGG - tig0016374:8658-8677 Msa1358690:three_prime_UTR 30.0%
TGATCAATGAAAGATGAATC+AGG + tig0016374:8722-8741 None:intergenic 30.0%
TTATTCATCACACACTTGAT+TGG + tig0016374:8824-8843 None:intergenic 30.0%
AATCAAGTGTGTGATGAATA+AGG - tig0016374:8823-8842 Msa1358690:three_prime_UTR 30.0%
! CACATCTATTGTAAAAGCAT+AGG + tig0016374:8855-8874 None:intergenic 30.0%
GAATCTGAATTTATCGTTTC+AGG - tig0016374:8949-8968 Msa1358690:CDS 30.0%
ATGATAGCATGAAGAAATAG+CGG - tig0016374:9104-9123 Msa1358690:intron 30.0%
TTATAGCGAATAGCTTATAG+TGG - tig0016374:9159-9178 Msa1358690:intron 30.0%
ATAACATGAGTAAAGTTGAG+AGG - tig0016374:9305-9324 Msa1358690:intron 30.0%
TAACATGAGTAAAGTTGAGA+GGG - tig0016374:9306-9325 Msa1358690:intron 30.0%
TATCATAAGACTTTGTGTAG+TGG + tig0016374:9646-9665 None:intergenic 30.0%
AACTTGTGTAAACAACTTGT+GGG + tig0016374:9747-9766 None:intergenic 30.0%
TTTACACAAGTTCTCAGAAA+TGG - tig0016374:9755-9774 Msa1358690:intron 30.0%
! GGTTCATTTGAGTTTATCTA+CGG + tig0016374:9786-9805 None:intergenic 30.0%
AAAGTAGAAGCTACTATATC+AGG + tig0016374:9822-9841 None:intergenic 30.0%
! GCAATTCAACAAACATTTTG+TGG - tig0016374:9940-9959 Msa1358690:intron 30.0%
AAACTGATAAAAGGAAGCTA+AGG + tig0016374:10169-10188 None:intergenic 30.0%
!!! TCAGCAGAAGCATTTTAAAA+CGG - tig0016374:10621-10640 Msa1358690:CDS 30.0%
! CCTTTCTTTTCCAACTATAA+CGG - tig0016374:11034-11053 Msa1358690:intron 30.0%
ATCTAGAAGAATGACAAGTA+AGG + tig0016374:11175-11194 None:intergenic 30.0%
AACATCATGAATGATGTTTC+AGG - tig0016374:11455-11474 Msa1358690:intron 30.0%
TTTGATATCACCATACCAAA+AGG - tig0016374:11526-11545 Msa1358690:intron 30.0%
ACCTCAATAAAATCTCCTTT+GGG + tig0016374:11578-11597 None:intergenic 30.0%
TACCTCAATAAAATCTCCTT+TGG + tig0016374:11579-11598 None:intergenic 30.0%
TGAGGTACATATACTTATTG+AGG - tig0016374:11592-11611 Msa1358690:intron 30.0%
TGCACAATTTAAAAACTTGG+GGG + tig0016374:11875-11894 None:intergenic 30.0%
GAGAATAGAAGAGATGAAAA+GGG + tig0016374:12044-12063 None:intergenic 30.0%
TGAGAATAGAAGAGATGAAA+AGG + tig0016374:12045-12064 None:intergenic 30.0%
TATCAAAGTATGTGTGAGTT+TGG - tig0016374:12258-12277 Msa1358690:CDS 30.0%
AAAGAAATCCAACCACATAT+GGG - tig0016374:12604-12623 Msa1358690:intron 30.0%
!! TGGGGACTTTAAAATCAAAA+AGG - tig0016374:12629-12648 Msa1358690:intron 30.0%
!! GGGGACTTTAAAATCAAAAA+GGG - tig0016374:12630-12649 Msa1358690:intron 30.0%
!! GGGACTTTAAAATCAAAAAG+GGG - tig0016374:12631-12650 Msa1358690:intron 30.0%
!! GGACTTTAAAATCAAAAAGG+GGG - tig0016374:12632-12651 Msa1358690:intron 30.0%
ATTGCTCAAAAAAAACTAGG+GGG - tig0016374:12673-12692 Msa1358690:intron 30.0%
TTGCACAATTTGAAAACATG+GGG - tig0016374:12703-12722 Msa1358690:intron 30.0%
CGCGATGCAAATAAAAAAAA+AGG + tig0016374:12748-12767 None:intergenic 30.0%
AATTCATAAAGCTAAACTGC+TGG + tig0016374:12853-12872 None:intergenic 30.0%
TTATCTATTTGGAAATCTGC+AGG - tig0016374:12907-12926 Msa1358690:intron 30.0%
! ACTCTGACATCTTGTTTATA+AGG + tig0016374:13056-13075 None:intergenic 30.0%
GATCAAAGGAAAAACATAGT+TGG + tig0016374:13082-13101 None:intergenic 30.0%
! TTTTTCCTTTGATCAAACGT+CGG - tig0016374:13088-13107 Msa1358690:intron 30.0%
! ATGAAGGCATAAATACAATC+CGG + tig0016374:13396-13415 None:intergenic 30.0%
!! AATACTTGATGTTACTTTGC+TGG - tig0016374:13667-13686 Msa1358690:CDS 30.0%
GAATAATTAGCAGAACATCA+AGG + tig0016374:13705-13724 None:intergenic 30.0%
! ATTTTCCAGAACATCGAATG+CGG - tig0016374:8497-8516 Msa1358690:three_prime_UTR 35.0%
GTAACAGAATTCCGAAATAC+AGG - tig0016374:8657-8676 Msa1358690:three_prime_UTR 35.0%
AACAGAATTCCGAAATACAG+GGG - tig0016374:8659-8678 Msa1358690:three_prime_UTR 35.0%
ACAGAAATTCCCCTGTATTT+CGG + tig0016374:8671-8690 None:intergenic 35.0%
GGGGAATTTCTGTGAATAAA+CGG - tig0016374:8678-8697 Msa1358690:three_prime_UTR 35.0%
! GATCATTCTTCTGCATTTTC+TGG - tig0016374:8737-8756 Msa1358690:three_prime_UTR 35.0%
TTTCTCTCTACCAGCTAAAT+AGG - tig0016374:8887-8906 Msa1358690:three_prime_UTR 35.0%
TGAAAGGAATCAAACTGTCA+AGG + tig0016374:9057-9076 None:intergenic 35.0%
!! GCTATTTCTTCATGCTATCA+TGG + tig0016374:9105-9124 None:intergenic 35.0%
GTAGTGTTTGGTTAAATGAG+CGG - tig0016374:9203-9222 Msa1358690:intron 35.0%
AACATGAGTAAAGTTGAGAG+GGG - tig0016374:9307-9326 Msa1358690:intron 35.0%
GCTATAAATCCGTGAGAAAA+AGG - tig0016374:9416-9435 Msa1358690:intron 35.0%
!! GTTTGGTAACCTTTTTCTCA+CGG + tig0016374:9428-9447 None:intergenic 35.0%
TATGACAAAAGAGACTCGTT+TGG + tig0016374:9445-9464 None:intergenic 35.0%
GAACTTGTGTAAACAACTTG+TGG + tig0016374:9748-9767 None:intergenic 35.0%
CTCAGCAATTTGACAACAAA+TGG - tig0016374:9918-9937 Msa1358690:intron 35.0%
CAGCAACTACTTCAACAAAA+AGG - tig0016374:9993-10012 Msa1358690:intron 35.0%
! TACGCAGACTTTCACATTTT+TGG - tig0016374:10512-10531 Msa1358690:intron 35.0%
!!! CAGCAGAAGCATTTTAAAAC+GGG - tig0016374:10622-10641 Msa1358690:CDS 35.0%
!!! AAGCATTTTAAAACGGGACA+CGG - tig0016374:10628-10647 Msa1358690:CDS 35.0%
! TTGGTCTATTTTCCATCACA+TGG - tig0016374:10661-10680 Msa1358690:CDS 35.0%
TGGTATTCTGTCTCTATAGA+TGG - tig0016374:10681-10700 Msa1358690:CDS 35.0%
ATTCATAAGCCAAGATCAGT+AGG + tig0016374:10936-10955 None:intergenic 35.0%
CCGTTATAGTTGGAAAAGAA+AGG + tig0016374:11037-11056 None:intergenic 35.0%
TGTTGTAGAACATCTACAGA+TGG - tig0016374:11061-11080 Msa1358690:intron 35.0%
AGTATATCTAGAAACAGTGC+TGG + tig0016374:11206-11225 None:intergenic 35.0%
GTCGAATATTATCACCATCA+AGG + tig0016374:11309-11328 None:intergenic 35.0%
GATGGTGATAATATTCGACA+TGG - tig0016374:11310-11329 Msa1358690:intron 35.0%
!! CTGCTCTAAAACTAAGATCA+CGG + tig0016374:11342-11361 None:intergenic 35.0%
! GCAAAAAAGGTGCAAGAATA+AGG + tig0016374:11414-11433 None:intergenic 35.0%
TTGGTATGGTGATATCAAAC+TGG + tig0016374:11525-11544 None:intergenic 35.0%
TGAGAGATGTAAGATTGCAT+AGG + tig0016374:11707-11726 None:intergenic 35.0%
TCTAAGAAAACCTACAACAC+GGG + tig0016374:11732-11751 None:intergenic 35.0%
GTCTAAGAAAACCTACAACA+CGG + tig0016374:11733-11752 None:intergenic 35.0%
AAAAAGTGATCAGGTGTGAA+AGG + tig0016374:12021-12040 None:intergenic 35.0%
TGAAAAGGGAAAAAGTGATC+AGG + tig0016374:12030-12049 None:intergenic 35.0%
TGCATTGAATTGGACAATCT+TGG + tig0016374:12118-12137 None:intergenic 35.0%
GAGAAAGAGAAAACATAGAG+AGG + tig0016374:12185-12204 None:intergenic 35.0%
TCAAAAATACTTTCCCGCAA+CGG + tig0016374:12350-12369 None:intergenic 35.0%
!!! TTGCGGGAAAGTATTTTTGA+AGG - tig0016374:12350-12369 Msa1358690:intron 35.0%
!! TTTTTGAAGGAAGACAGTGA+AGG - tig0016374:12363-12382 Msa1358690:intron 35.0%
!! TTTTGAAGGAAGACAGTGAA+GGG - tig0016374:12364-12383 Msa1358690:intron 35.0%
!!! TTTTTGGTTGATGAATACGG+CGG - tig0016374:12461-12480 Msa1358690:intron 35.0%
GGAAATTGATCAAGTGTGAA+AGG - tig0016374:12558-12577 Msa1358690:intron 35.0%
CAAAGAAATCCAACCACATA+TGG - tig0016374:12603-12622 Msa1358690:intron 35.0%
AATCAAAAAGGGGGTAAACA+TGG - tig0016374:12641-12660 Msa1358690:intron 35.0%
ATCAAAAAGGGGGTAAACAT+GGG - tig0016374:12642-12661 Msa1358690:intron 35.0%
TGCACAATTTGAAAACATGG+GGG - tig0016374:12704-12723 Msa1358690:intron 35.0%
TGCTCACATTATGTTTATGC+TGG - tig0016374:12804-12823 Msa1358690:intron 35.0%
GCTCACATTATGTTTATGCT+GGG - tig0016374:12805-12824 Msa1358690:intron 35.0%
GATGCAATACTATCTGTAAG+AGG + tig0016374:13148-13167 None:intergenic 35.0%
ATATCCTACTTGGAGAAGAA+TGG - tig0016374:13218-13237 Msa1358690:intron 35.0%
TATCCTACTTGGAGAAGAAT+GGG - tig0016374:13219-13238 Msa1358690:intron 35.0%
!! GTGTCTTTCTTGTTTGTTGT+AGG - tig0016374:13270-13289 Msa1358690:intron 35.0%
ATCATTGTTCACTATGCATC+TGG - tig0016374:13349-13368 Msa1358690:intron 35.0%
TCCACTTACTGATGTAATGA+AGG + tig0016374:13412-13431 None:intergenic 35.0%
! GTTACTTTGCTGGTATAATG+AGG - tig0016374:13677-13696 Msa1358690:CDS 35.0%
! CAACGGCATTGAATCTATGA+CGG + tig0016374:8559-8578 None:intergenic 40.0%
AGATTCAATGCCGTTGGATT+AGG - tig0016374:8563-8582 Msa1358690:three_prime_UTR 40.0%
!! AAGTTTGTTGAAGCCGATCA+CGG - tig0016374:8598-8617 Msa1358690:three_prime_UTR 40.0%
TGTGAAGCAACCTATTTAGC+TGG + tig0016374:8900-8919 None:intergenic 40.0%
ATATCAGGATCTGTCTGTAC+TGG + tig0016374:9807-9826 None:intergenic 40.0%
TACCTAGCTAGATGATAGCT+GGG + tig0016374:9893-9912 None:intergenic 40.0%
TTACCTAGCTAGATGATAGC+TGG + tig0016374:9894-9913 None:intergenic 40.0%
! AACAAAAAGGCTGTGTCGTT+TGG - tig0016374:10006-10025 Msa1358690:intron 40.0%
!! ACAAAAAGGCTGTGTCGTTT+GGG - tig0016374:10007-10026 Msa1358690:intron 40.0%
AAGCCAAAACTAGCAGAGAA+TGG + tig0016374:10385-10404 None:intergenic 40.0%
TTAGCACGTGGTTGGAAAAA+AGG + tig0016374:10416-10435 None:intergenic 40.0%
GCAAAAAATTAGCACGTGGT+TGG + tig0016374:10424-10443 None:intergenic 40.0%
TCAGGCAAAAAATTAGCACG+TGG + tig0016374:10428-10447 None:intergenic 40.0%
!!! AGCATTTTAAAACGGGACAC+GGG - tig0016374:10629-10648 Msa1358690:CDS 40.0%
AGAGACAGAATACCATGTGA+TGG + tig0016374:10676-10695 None:intergenic 40.0%
CATGTCAATCCTACTGATCT+TGG - tig0016374:10924-10943 Msa1358690:CDS 40.0%
ACAACAGTGACCGTTATAGT+TGG + tig0016374:11047-11066 None:intergenic 40.0%
!! GATTTCAGGAAAAAGCACTC+TGG - tig0016374:11234-11253 Msa1358690:intron 40.0%
ATCGTTCAGAGAACATACGA+AGG - tig0016374:11365-11384 Msa1358690:intron 40.0%
TCAGAGAACATACGAAGGAT+TGG - tig0016374:11370-11389 Msa1358690:intron 40.0%
AGGTGAAGTAGCTAAACTCT+TGG - tig0016374:11475-11494 Msa1358690:intron 40.0%
! GCATCTCTATCCTTTTGGTA+TGG + tig0016374:11539-11558 None:intergenic 40.0%
! TGCAAGCATCTCTATCCTTT+TGG + tig0016374:11544-11563 None:intergenic 40.0%
AAAAGGATAGAGATGCTTGC+AGG - tig0016374:11543-11562 Msa1358690:intron 40.0%
AAAGGATAGAGATGCTTGCA+GGG - tig0016374:11544-11563 Msa1358690:intron 40.0%
! GCCCAAAGGAGATTTTATTG+AGG - tig0016374:11574-11593 Msa1358690:intron 40.0%
GACAAACTACCTGCGAAATT+TGG + tig0016374:11622-11641 None:intergenic 40.0%
CAAGCTTGTATAGTCCCTTT+GGG + tig0016374:11785-11804 None:intergenic 40.0%
TCAAACCACATATGGGTGTA+GGG + tig0016374:11968-11987 None:intergenic 40.0%
ATCAAACCACATATGGGTGT+AGG + tig0016374:11969-11988 None:intergenic 40.0%
TCTCATCTCAACAAGTACCA+TGG - tig0016374:12060-12079 Msa1358690:intron 40.0%
!! CAATCTTGGTTTGTGTTTGG+TGG + tig0016374:12104-12123 None:intergenic 40.0%
!! GGACAATCTTGGTTTGTGTT+TGG + tig0016374:12107-12126 None:intergenic 40.0%
CAAAGTATGTGTGAGTTTGG+TGG - tig0016374:12261-12280 Msa1358690:CDS 40.0%
AGTTTGGATGAGGTTATGGT+GGG - tig0016374:12306-12325 Msa1358690:intron 40.0%
TTTGAAGGAAGACAGTGAAG+GGG - tig0016374:12365-12384 Msa1358690:intron 40.0%
!!! GGATGGGAGTTGTTGATTTT+TGG - tig0016374:12445-12464 Msa1358690:intron 40.0%
!!! TTTTGGTTGATGAATACGGC+GGG - tig0016374:12462-12481 Msa1358690:intron 40.0%
ATGGAAGAGAACGGATGAAA+AGG - tig0016374:12535-12554 Msa1358690:intron 40.0%
TGGAAGAGAACGGATGAAAA+GGG - tig0016374:12536-12555 Msa1358690:intron 40.0%
TCAAAAAGGGGGTAAACATG+GGG - tig0016374:12643-12662 Msa1358690:intron 40.0%
TTTAGCCGACGTTTGATCAA+AGG + tig0016374:13096-13115 None:intergenic 40.0%
CTGTATGTCTCCAAGTAATG+CGG - tig0016374:13184-13203 Msa1358690:intron 40.0%
!! ACTTTTTCTGCCGCATTACT+TGG + tig0016374:13197-13216 None:intergenic 40.0%
ACAATGATTTCCTTGCTGCT+TGG + tig0016374:13337-13356 None:intergenic 40.0%
AAATACAATCCGGATGCATG+TGG + tig0016374:13386-13405 None:intergenic 40.0%
GCCTTCATTACATCAGTAAG+TGG - tig0016374:13408-13427 Msa1358690:intron 40.0%
CATTACATCAGTAAGTGGAG+TGG - tig0016374:13413-13432 Msa1358690:intron 40.0%
TGGCAAACAAATGCTTCTTG+TGG - tig0016374:13532-13551 Msa1358690:CDS 40.0%
ATCTATCTACAACCAGTCAC+TGG - tig0016374:13598-13617 Msa1358690:intron 40.0%
AAAATTCCACCACCACACTG+TGG + tig0016374:8482-8501 None:intergenic 45.0%
AAGTTCCGCATTCGATGTTC+TGG + tig0016374:8505-8524 None:intergenic 45.0%
CGTCATAGATTCAATGCCGT+TGG - tig0016374:8557-8576 Msa1358690:three_prime_UTR 45.0%
! GCATCCATGTATGCTGCTTA+CGG - tig0016374:9030-9049 Msa1358690:intron 45.0%
GTTGCTGTCTATCAAGCTTC+TGG + tig0016374:9980-9999 None:intergenic 45.0%
!! GCACCATTCTCTGCTAGTTT+TGG - tig0016374:10379-10398 Msa1358690:intron 45.0%
TGAGGTGAACCAAATTTCGC+AGG - tig0016374:11610-11629 Msa1358690:intron 45.0%
ATCTCTCAAACCCGTGTTGT+AGG - tig0016374:11719-11738 Msa1358690:intron 45.0%
ACTAGCTGTGTGTGAAGCAA+GGG - tig0016374:11758-11777 Msa1358690:intron 45.0%
GCAAGCTTGTATAGTCCCTT+TGG + tig0016374:11786-11805 None:intergenic 45.0%
CAAAAAGGGGGTAAACATGG+GGG + tig0016374:12644-12663 None:intergenic 45.0%
AAAGTCCCTACACCCATATG+TGG - tig0016374:11960-11979 Msa1358690:intron 45.0%
!! AATGAGAAGCATCAGAGCCA+TGG + tig0016374:12080-12099 None:intergenic 45.0%
TAGTGAATGGGGAGACAACA+CGG + tig0016374:12207-12226 None:intergenic 45.0%
TTGCCGCAAGTGTAGTGAAT+GGG + tig0016374:12219-12238 None:intergenic 45.0%
TTTGCCGCAAGTGTAGTGAA+TGG + tig0016374:12220-12239 None:intergenic 45.0%
ACTACACTTGCGGCAAACTA+TGG - tig0016374:12223-12242 Msa1358690:CDS 45.0%
CTACACTTGCGGCAAACTAT+GGG - tig0016374:12224-12243 Msa1358690:CDS 45.0%
TACACTTGCGGCAAACTATG+GGG - tig0016374:12225-12244 Msa1358690:CDS 45.0%
!! TATGTGTGAGTTTGGTGGTG+AGG - tig0016374:12266-12285 Msa1358690:CDS 45.0%
! GTGAGGAAGAGAGGGTATAT+GGG - tig0016374:12283-12302 Msa1358690:intron 45.0%
! AGAGAGGGTATATGGGAGTT+TGG - tig0016374:12290-12309 Msa1358690:intron 45.0%
GGTATATGGGAGTTTGGATG+AGG - tig0016374:12296-12315 Msa1358690:intron 45.0%
TGGGAGTTTGGATGAGGTTA+TGG - tig0016374:12302-12321 Msa1358690:intron 45.0%
GAGTTTGGATGAGGTTATGG+TGG - tig0016374:12305-12324 Msa1358690:intron 45.0%
! GATGGAATGTGTGATGACGA+TGG - tig0016374:12387-12406 Msa1358690:intron 45.0%
! TGTGATGACGATGGTTGTGT+TGG - tig0016374:12396-12415 Msa1358690:intron 45.0%
! GTGATGACGATGGTTGTGTT+GGG - tig0016374:12397-12416 Msa1358690:intron 45.0%
!! TTTGGTTGATGAATACGGCG+GGG - tig0016374:12463-12482 Msa1358690:intron 45.0%
GCTGTTGTCGGAAACAAAGA+GGG - tig0016374:12485-12504 Msa1358690:intron 45.0%
TCGGAAACAAAGAGGGTTCA+AGG - tig0016374:12492-12511 Msa1358690:intron 45.0%
AGGGTTCAAGGAAGTCTACT+GGG - tig0016374:12504-12523 Msa1358690:intron 45.0%
GGAGGTAGAATGGAAGAGAA+CGG - tig0016374:12526-12545 Msa1358690:intron 45.0%
GGAAGAGAACGGATGAAAAG+GGG - tig0016374:12537-12556 Msa1358690:intron 45.0%
AATCCAACCACATATGGGTG+TGG - tig0016374:12609-12628 Msa1358690:intron 45.0%
ATCCAACCACATATGGGTGT+GGG - tig0016374:12610-12629 Msa1358690:intron 45.0%
CAAAAAGGGGGTAAACATGG+GGG - tig0016374:12644-12663 Msa1358690:intron 45.0%
TGGAAATCTGCAGGTTTCAC+AGG - tig0016374:12916-12935 Msa1358690:intron 45.0%
GGAAATCTGCAGGTTTCACA+GGG - tig0016374:12917-12936 Msa1358690:intron 45.0%
TACACACCTCACAGCTACAT+GGG + tig0016374:12963-12982 None:intergenic 45.0%
ATACACACCTCACAGCTACA+TGG + tig0016374:12964-12983 None:intergenic 45.0%
GTACCCATTCTTCTCCAAGT+AGG + tig0016374:13225-13244 None:intergenic 45.0%
CATCAGTAAGTGGAGTGGAT+CGG - tig0016374:13418-13437 Msa1358690:intron 45.0%
!! ATGCTGCTATTTCCAGTGAC+TGG + tig0016374:13613-13632 None:intergenic 45.0%
CATCGAATGCGGAACTTCGA+CGG - tig0016374:8508-8527 Msa1358690:three_prime_UTR 50.0%
TCGACGACGACCTAATCCAA+CGG + tig0016374:8576-8595 None:intergenic 50.0%
ATAGGTTGCTTCACAGCCGT+TGG - tig0016374:8905-8924 Msa1358690:three_prime_UTR 50.0%
CGGACTGCACTTGAATCCAA+CGG + tig0016374:8924-8943 None:intergenic 50.0%
AGGACCGTAAGCAGCATACA+TGG + tig0016374:9037-9056 None:intergenic 50.0%
GACCCAGCTATCATCTAGCT+AGG - tig0016374:9888-9907 Msa1358690:intron 50.0%
! GTTTGGGTAACTGGTCTCAG+CGG - tig0016374:10023-10042 Msa1358690:intron 50.0%
GCTAAACTCTTGGCAGATGC+AGG - tig0016374:11485-11504 Msa1358690:intron 50.0%
CTTGCTTCACACACAGCTAG+TGG + tig0016374:11759-11778 None:intergenic 50.0%
CACTAGCTGTGTGTGAAGCA+AGG - tig0016374:11757-11776 Msa1358690:intron 50.0%
TGTGAAGCAAGGGACCCAAA+GGG - tig0016374:11768-11787 Msa1358690:intron 50.0%
! CTATACAAGCTTGCTCGAGC+TGG - tig0016374:11792-11811 Msa1358690:intron 50.0%
GCTCGAGCTGGAATGATCAA+AGG - tig0016374:11804-11823 Msa1358690:intron 50.0%
CTCCCCATTCACTACACTTG+CGG - tig0016374:12213-12232 Msa1358690:CDS 50.0%
TGCCGCAAGTGTAGTGAATG+GGG + tig0016374:12218-12237 None:intergenic 50.0%
ACACTTGCGGCAAACTATGG+GGG - tig0016374:12226-12245 Msa1358690:CDS 50.0%
!! AGTTTGGTGGTGAGGAAGAG+AGG - tig0016374:12274-12293 Msa1358690:intron 50.0%
!! GTTTGGTGGTGAGGAAGAGA+GGG - tig0016374:12275-12294 Msa1358690:intron 50.0%
! GGTGAGGAAGAGAGGGTATA+TGG - tig0016374:12282-12301 Msa1358690:intron 50.0%
!! GATGAGGTTATGGTGGGTGA+TGG - tig0016374:12312-12331 Msa1358690:intron 50.0%
!! TTATGGTGGGTGATGGTGAC+AGG - tig0016374:12319-12338 Msa1358690:intron 50.0%
GGTGACAGGTTAAACCGTTG+CGG - tig0016374:12333-12352 Msa1358690:intron 50.0%
GTGACAGGTTAAACCGTTGC+GGG - tig0016374:12334-12353 Msa1358690:intron 50.0%
AAGGAAGACAGTGAAGGGGA+TGG - tig0016374:12369-12388 Msa1358690:intron 50.0%
ATGACGATGGTTGTGTTGGG+TGG - tig0016374:12400-12419 Msa1358690:intron 50.0%
TGGAAGGTTGTTGTGGTGGT+GGG - tig0016374:12423-12442 Msa1358690:intron 50.0%
GGCTGTTGTCGGAAACAAAG+AGG - tig0016374:12484-12503 Msa1358690:intron 50.0%
GAGGGTTCAAGGAAGTCTAC+TGG - tig0016374:12503-12522 Msa1358690:intron 50.0%
GGGTTCAAGGAAGTCTACTG+GGG - tig0016374:12505-12524 Msa1358690:intron 50.0%
TTCAAGGAAGTCTACTGGGG+AGG - tig0016374:12508-12527 Msa1358690:intron 50.0%
AGTCTACTGGGGAGGTAGAA+TGG - tig0016374:12516-12535 Msa1358690:intron 50.0%
TCCAACCACATATGGGTGTG+GGG - tig0016374:12611-12630 Msa1358690:intron 50.0%
AAAGTCCCCACACCCATATG+TGG + tig0016374:12619-12638 None:intergenic 50.0%
!! GCATCGCGGCTTTATTTGTG+TGG - tig0016374:12760-12779 Msa1358690:intron 50.0%
CAGCTACATGGGGGTTCATA+AGG + tig0016374:12952-12971 None:intergenic 50.0%
ACACACCTCACAGCTACATG+GGG + tig0016374:12962-12981 None:intergenic 50.0%
TGGAGAAGAATGGGTACCTG+CGG - tig0016374:13228-13247 Msa1358690:intron 50.0%
AACTGCTTCTCCAAGCAGCA+AGG - tig0016374:13324-13343 Msa1358690:intron 50.0%
ACTTCGACGGCGGAGAAGTT+AGG - tig0016374:8521-8540 Msa1358690:three_prime_UTR 55.0%
TGCTCCTCTTTCGCCGTGAT+CGG + tig0016374:8614-8633 None:intergenic 55.0%
!! GGCTGTGTCGTTTGGGTAAC+TGG - tig0016374:10014-10033 Msa1358690:intron 55.0%
! GTAACTGGTCTCAGCGGTTC+AGG - tig0016374:10029-10048 Msa1358690:intron 55.0%
GGGACACGGGACACATACTT+TGG - tig0016374:10642-10661 Msa1358690:CDS 55.0%
AGTCGAAGCTTGCACTCGAG+AGG - tig0016374:11268-11287 Msa1358690:intron 55.0%
GTGTGAAGCAAGGGACCCAA+AGG - tig0016374:11767-11786 Msa1358690:intron 55.0%
CACTTGCGGCAAACTATGGG+GGG - tig0016374:12227-12246 Msa1358690:CDS 55.0%
GGCAAACTATGGGGGGAGTT+TGG - tig0016374:12234-12253 Msa1358690:CDS 55.0%
ACGATGGTTGTGTTGGGTGG+TGG - tig0016374:12403-12422 Msa1358690:intron 55.0%
!! TGGTTGTGTTGGGTGGTGGA+AGG - tig0016374:12407-12426 Msa1358690:intron 55.0%
!! TGGGTGGTGGAAGGTTGTTG+TGG - tig0016374:12416-12435 Msa1358690:intron 55.0%
! GTGGTGGAAGGTTGTTGTGG+TGG - tig0016374:12419-12438 Msa1358690:intron 55.0%
GTGGAAGGTTGTTGTGGTGG+TGG - tig0016374:12422-12441 Msa1358690:intron 55.0%
! GGAAGGTTGTTGTGGTGGTG+GGG - tig0016374:12424-12443 Msa1358690:intron 55.0%
!! GTTGTTGTGGTGGTGGGGAT+GGG - tig0016374:12429-12448 Msa1358690:intron 55.0%
TCCCCACACCCATATGTGGT+TGG + tig0016374:12615-12634 None:intergenic 55.0%
TGAACCCCCATGTAGCTGTG+AGG - tig0016374:12954-12973 Msa1358690:intron 55.0%
CACACCTCACAGCTACATGG+GGG + tig0016374:12961-12980 None:intergenic 55.0%
GGAGAAGAATGGGTACCTGC+GGG - tig0016374:13229-13248 Msa1358690:intron 55.0%
! GACACCGTTCAAGCATCGTC+AGG + tig0016374:13255-13274 None:intergenic 55.0%
CCATCCAAGCCACATGCATC+CGG - tig0016374:13374-13393 Msa1358690:intron 55.0%
CAATCCGGATGCATGTGGCT+TGG + tig0016374:13381-13400 None:intergenic 55.0%
GTAAGTGGAGTGGATCGGTG+AGG - tig0016374:13423-13442 Msa1358690:intron 55.0%
!! AGGAAGGAGCTGGTCTTGGT+TGG - tig0016374:13443-13462 Msa1358690:CDS 55.0%
! CAAGCACTGCAGCCACAGTG+TGG - tig0016374:8467-8486 Msa1358690:three_prime_UTR 60.0%
CGAATGCGGAACTTCGACGG+CGG - tig0016374:8511-8530 Msa1358690:three_prime_UTR 60.0%
GAAGCCGATCACGGCGAAAG+AGG - tig0016374:8607-8626 Msa1358690:three_prime_UTR 60.0%
TGCAGGGCTCTACTGCCCAA+AGG - tig0016374:11560-11579 Msa1358690:intron 60.0%
!! GGTTGTTGTGGTGGTGGGGA+TGG - tig0016374:12428-12447 Msa1358690:intron 60.0%
GAATACGGCGGGGCTGTTGT+CGG - tig0016374:12473-12492 Msa1358690:intron 60.0%
CGGGCCTGACGATGCTTGAA+CGG - tig0016374:13248-13267 Msa1358690:intron 60.0%
! CCGGATGCATGTGGCTTGGA+TGG + tig0016374:13377-13396 None:intergenic 60.0%
GTGGAGTGGATCGGTGAGGA+AGG - tig0016374:13427-13446 Msa1358690:intron 60.0%
TGGATCGGTGAGGAAGGAGC+TGG - tig0016374:13433-13452 Msa1358690:intron 60.0%
! GGTGAGGAAGGAGCTGGTCT+TGG - tig0016374:13439-13458 Msa1358690:CDS 60.0%
GCACTGCAGCCACAGTGTGG+TGG - tig0016374:8470-8489 Msa1358690:three_prime_UTR 65.0%
CTGCAGCCACAGTGTGGTGG+TGG - tig0016374:8473-8492 Msa1358690:three_prime_UTR 65.0%
! TCAAGCATCGTCAGGCCCGC+AGG + tig0016374:13247-13266 None:intergenic 65.0%
Chromosome Type Strat End Strand Name
tig0016374 gene 8455 13742 8455 ID=Msa1358690;Name=Msa1358690
tig0016374 mRNA 8455 13742 8455 ID=Msa1358690-mRNA-1;Parent=Msa1358690;Name=Msa1358690-mRNA-1;_AED=0.21;_eAED=0.21;_QI=0|0.4|0.66|1|0.2|0.5|6|486|262
tig0016374 exon 8455 9042 8455 ID=Msa1358690-mRNA-1:exon:10996;Parent=Msa1358690-mRNA-1
tig0016374 exon 10602 10720 10602 ID=Msa1358690-mRNA-1:exon:10995;Parent=Msa1358690-mRNA-1
tig0016374 exon 10806 10955 10806 ID=Msa1358690-mRNA-1:exon:10994;Parent=Msa1358690-mRNA-1
tig0016374 exon 12147 12287 12147 ID=Msa1358690-mRNA-1:exon:10993;Parent=Msa1358690-mRNA-1
tig0016374 exon 13439 13612 13439 ID=Msa1358690-mRNA-1:exon:10992;Parent=Msa1358690-mRNA-1
tig0016374 exon 13640 13742 13640 ID=Msa1358690-mRNA-1:exon:10991;Parent=Msa1358690-mRNA-1
tig0016374 CDS 13640 13742 13640 ID=Msa1358690-mRNA-1:cds;Parent=Msa1358690-mRNA-1
tig0016374 CDS 13439 13612 13439 ID=Msa1358690-mRNA-1:cds;Parent=Msa1358690-mRNA-1
tig0016374 CDS 12147 12287 12147 ID=Msa1358690-mRNA-1:cds;Parent=Msa1358690-mRNA-1
tig0016374 CDS 10806 10955 10806 ID=Msa1358690-mRNA-1:cds;Parent=Msa1358690-mRNA-1
tig0016374 CDS 10602 10720 10602 ID=Msa1358690-mRNA-1:cds;Parent=Msa1358690-mRNA-1
tig0016374 CDS 8941 9042 8941 ID=Msa1358690-mRNA-1:cds;Parent=Msa1358690-mRNA-1
tig0016374 three_prime_UTR 8455 8940 8455 ID=Msa1358690-mRNA-1:three_prime_utr;Parent=Msa1358690-mRNA-1
Gene Sequence

>Msa1358690

ATGTGTTTCGTACAAGCACTGCAGCCACAGTGTGGTGGTGGAATTTTCCAGAACATCGAATGCGGAACTTCGACGGCGGAGAAGTTAGGATTTGTTAACTTCCGTCGTCGTCGAAGAAGTTTGTTGAAGCCGATCACGGCGAAAGAGGAGCATGAATCGTTTATTGTTGATGACGGTAACAGAATTCCGAAATACAGGGGAATTTCTGTGAATAAACGGAACTGTGTTAAAAATGAACCTGATTCATCTTTCATTGATCATTCTTCTGCATTTTCTGGTAAAAATCTCAGCAATTTGACAACAAATGGCAATTCAACAAACATTTTGTGGCATGAATGTTCAATCCAGAAGCTTGATAGACAGCAACTACTTCAACAAAAAGGCTGTGTCGTTTGGGTAACTGGTCTCAGCGGTTCAGGAAAAAGCACTCTGGCATGCGCTTTGAGTCGAAGCTTGCACTCGAGAGGAAAGTTAACATATATCCTTGATGGTGATAATATTCGACATGGTCTAAACCGTGATCTTAGTTTTAGAGCAGAAGATCGTTCAGAGAACATACGAAGGATTGGTGAAGTAGCTAAACTCTTGGCAGATGCAGGAGTTATTTGCATCACCAGTTTGATATCACCATACCAAAAGGATAGAGATGCTTGCAGGGCTCTACTGCCCAAAGGAGATTTTATTGAGATAGTATTGCATCAGCAAAAAGAAAGTGACTGTATGTCTCCAAGTAATGCGGCAGAAAAAGTAATATCCTACTTGGAGAAGAATGGGTACCTGCGGGCCTGA
Protein sequence

>Msa1358690

MCFVQALQPQCGGGIFQNIECGTSTAEKLGFVNFRRRRRSLLKPITAKEEHESFIVDDGNRIPKYRGISVNKRNCVKNEPDSSFIDHSSAFSGKNLSNLTTNGNSTNILWHECSIQKLDRQQLLQQKGCVVWVTGLSGSGKSTLACALSRSLHSRGKLTYILDGDNIRHGLNRDLSFRAEDRSENIRRIGEVAKLLADAGVICITSLISPYQKDRDACRALLPKGDFIEIVLHQQKESDCMSPSNAAEKVISYLEKNGYLRA*