AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa1358890

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa1358890 MtrunA17_Chr4g0072481 96.892 547 17 0 1 547 1 547 0.0 1098
Msa1358890 MtrunA17_Chr3g0120751 21.951 410 278 12 142 518 63 463 4.10e-18 87.4
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa1358890 AT2G18850.1 52.247 534 249 4 5 537 10 538 0.0 558
Msa1358890 AT2G18850.2 51.873 534 244 5 5 537 10 531 0.0 550
Msa1358890 AT3G07670.1 23.382 479 306 19 82 520 15 472 1.65e-20 95.1
Msa1358890 AT3G07670.2 24.528 318 200 11 234 520 26 334 1.63e-15 79.0

Find 134 sgRNAs with CRISPR-Local

Find 785 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
TTTGATTTAATTTCTGATTT+TGG 0.061221 tig0016544:+49369 Msa1358890:CDS
TCCACGCGGTAGATTTAATT+TGG 0.159441 tig0016544:+57991 Msa1358890:three_prime_UTR
TGGTCTTCCCTCTCCATTAT+TGG 0.251856 tig0016544:+56934 Msa1358890:CDS
ATACATTATCTTCATGCTAT+TGG 0.253277 tig0016544:-55921 None:intergenic
GTTTCAACTTCTTGCTGTAC+TGG 0.267684 tig0016544:+57906 Msa1358890:CDS
TAATTTGCAGGATTGAGTTT+TGG 0.273161 tig0016544:+52898 Msa1358890:intron
GTACTCCCTTCATATTGTTT+TGG 0.278110 tig0016544:-49395 None:intergenic
CCGTATGATGTCATTCCTTT+AGG 0.285448 tig0016544:+56663 Msa1358890:CDS
GAAAATGAGCTAGAAGTTCT+TGG 0.287372 tig0016544:+57353 Msa1358890:CDS
CTGAGACAATATTGCTGTTA+TGG 0.304721 tig0016544:+50361 Msa1358890:CDS
GAGAGCCTCCAACTCATTCC+TGG 0.355681 tig0016544:-49259 None:intergenic
TGGTCACGAGTGTTCTAATA+TGG 0.358809 tig0016544:+58318 Msa1358890:three_prime_UTR
TCAGAAATTACTACGATGTA+AGG 0.359589 tig0016544:+48828 Msa1358890:intron
AATCACAGCATATTCTATTA+TGG 0.363717 tig0016544:+56914 Msa1358890:CDS
TTCTAGAACCTACCGTGTTC+TGG 0.364789 tig0016544:+47239 Msa1358890:five_prime_UTR
TCATTACATTATCTTTGAAA+TGG 0.368906 tig0016544:+58294 Msa1358890:three_prime_UTR
AGTGCTCCTCAGGACCTTCT+TGG 0.369830 tig0016544:+48881 Msa1358890:CDS
ACATGTTTGATACCTCTTGC+TGG 0.371762 tig0016544:+55962 Msa1358890:CDS
TCCACAGTTGCAAGGAAACT+TGG 0.382837 tig0016544:+57331 Msa1358890:intron
CTAGACTTCAAAAGAATTTG+TGG 0.386959 tig0016544:-58209 None:intergenic
TGACGACATGATGGACAGTA+TGG 0.401765 tig0016544:+57394 Msa1358890:CDS
ATCTCTGGAGGAAATATATC+AGG 0.406816 tig0016544:-55854 None:intergenic
AGCAAGCAACTGTTTCTTAC+CGG 0.409122 tig0016544:-58173 None:intergenic
CTCCATTATTGGATCATCTT+CGG 0.411384 tig0016544:+56945 Msa1358890:CDS
CTATCAAGACCATGCCGATC+TGG 0.413805 tig0016544:+56558 Msa1358890:CDS
ATAGAATATGCTGTGATTGT+TGG 0.416388 tig0016544:-56909 None:intergenic
CACCATGTGAGTCGTCCATT+TGG 0.419396 tig0016544:-56870 None:intergenic
TGCCCACATATTACACACTA+TGG 0.422578 tig0016544:+56498 Msa1358890:CDS
TTCTCCCAAGTGTAAATCTC+TGG 0.423678 tig0016544:-55869 None:intergenic
CTCCGAAGATGATCCAATAA+TGG 0.426430 tig0016544:-56947 None:intergenic
AATTTCAATGAATTTGTTGA+AGG 0.427682 tig0016544:-56531 None:intergenic
GCTTGTGCTTGAAACTGATA+TGG 0.430090 tig0016544:+49728 Msa1358890:CDS
AGATGTTGAAGGAGCAGGCC+GGG 0.432091 tig0016544:+49629 Msa1358890:intron
GCAGGCCGGGGAATGATAGC+AGG 0.433260 tig0016544:+49642 Msa1358890:CDS
AAAGTCTTTGTTTGCATCAC+AGG 0.436089 tig0016544:-56980 None:intergenic
TTACTACGATGTAAGGGGTT+TGG 0.439522 tig0016544:+48835 Msa1358890:CDS
AAGCTCCTCAGAAATGATAA+TGG 0.442652 tig0016544:-49709 None:intergenic
TTTCAACTTCTTGCTGTACT+GGG 0.444329 tig0016544:+57907 Msa1358890:CDS
TCCTTTCTTTGATGAAAAGA+AGG 0.455845 tig0016544:+47910 Msa1358890:CDS
TACATTATCTTTGAAATGGA+TGG 0.458485 tig0016544:+58298 Msa1358890:three_prime_UTR
GAATGAACTGCACAAGTGTT+TGG 0.459339 tig0016544:+57944 Msa1358890:CDS
TGTTTGGCTGAGGACATTGT+AGG 0.459596 tig0016544:+57960 Msa1358890:CDS
ACCCTTGCAGGATGTTTGTA+TGG 0.460432 tig0016544:-49332 None:intergenic
TTGGTTCCTGCTTTGTGCAA+TGG 0.460579 tig0016544:+55827 Msa1358890:CDS
TTAATCTACACAGATGTTGA+AGG 0.462913 tig0016544:+49618 Msa1358890:intron
GCTTAGCTGCCTCGACCATA+TGG 0.463395 tig0016544:+58083 Msa1358890:three_prime_UTR
ATACATCTCAAGTGCTCCTC+AGG 0.464633 tig0016544:+48871 Msa1358890:CDS
AGGATAAACCTGTGTCCAAA+TGG 0.465266 tig0016544:+56855 Msa1358890:CDS
TTGAGATGTATCCATTCCTT+GGG 0.465915 tig0016544:-48859 None:intergenic
CTTGAGATGTATCCATTCCT+TGG 0.467813 tig0016544:-48860 None:intergenic
GTGAAGTCGATCTTGATAAC+AGG 0.473430 tig0016544:+57417 Msa1358890:CDS
TTCTGATGTTGATTCTATTG+AGG 0.474846 tig0016544:+56835 Msa1358890:CDS
CTAAGCTTCGCTGTACCATA+TGG 0.475189 tig0016544:-58098 None:intergenic
TCAGTATCGTCTCTTGAAAG+AGG 0.476597 tig0016544:+50323 Msa1358890:intron
GAGAAGAACACCTGATTGAG+TGG 0.477724 tig0016544:+49442 Msa1358890:CDS
GCAGGGAAAGATCTAAAAGT+TGG 0.483249 tig0016544:+49660 Msa1358890:CDS
TGGGGACCAAAACAATATGA+AGG 0.487327 tig0016544:+49389 Msa1358890:CDS
ATATGTCAAAATCTAAACTA+AGG 0.487996 tig0016544:-58015 None:intergenic
GAAGAATGCTGCTTAAGCTA+TGG 0.488333 tig0016544:+56582 Msa1358890:CDS
CGTCTCTTGAAAGAGGTTGA+TGG 0.489397 tig0016544:+50330 Msa1358890:CDS
AGCAAGAAGTTGAAACAGAA+TGG 0.489908 tig0016544:-57899 None:intergenic
GAAGCGATTACAATGCTAGA+TGG 0.490904 tig0016544:+52925 Msa1358890:CDS
CCTAAAGGAATGACATCATA+CGG 0.505016 tig0016544:-56663 None:intergenic
GCTGTGATTGTTGGAGAGCC+AGG 0.506463 tig0016544:-56900 None:intergenic
CAGCCCCAGGAATGAGTTGG+AGG 0.515961 tig0016544:+49254 Msa1358890:CDS
GCAAGCAACTGTTTCTTACC+GGG 0.517659 tig0016544:-58172 None:intergenic
AGAGCCTCCAACTCATTCCT+GGG 0.519139 tig0016544:-49258 None:intergenic
TCCTCCAGAGATTTACACTT+GGG 0.521467 tig0016544:+55865 Msa1358890:CDS
TACACAGATGTTGAAGGAGC+AGG 0.521506 tig0016544:+49624 Msa1358890:intron
AAAAGCCATGGTGTAAAGAC+AGG 0.525288 tig0016544:+49468 Msa1358890:CDS
ACGATATCATTCATCCAAGA+AGG 0.525319 tig0016544:-48895 None:intergenic
AAATGTAATAAAATGAGAGC+TGG 0.529710 tig0016544:-56613 None:intergenic
GGAAAACCATTGCACAAAGC+AGG 0.530912 tig0016544:-55833 None:intergenic
CAGAAATTACTACGATGTAA+GGG 0.531459 tig0016544:+48829 Msa1358890:intron
ATGTAAGGGGTTTGGTCCCA+AGG 0.532723 tig0016544:+48843 Msa1358890:CDS
AGGGGTTTGGTCCCAAGGAA+TGG 0.533877 tig0016544:+48848 Msa1358890:CDS
CGTGTCCATTATCATTTCTG+AGG 0.534034 tig0016544:+49704 Msa1358890:CDS
CAGATGTTGAAGGAGCAGGC+CGG 0.534056 tig0016544:+49628 Msa1358890:intron
CTTTCCCTGCTATCATTCCC+CGG 0.534319 tig0016544:-49647 None:intergenic
AAGAATGCTGCTTAAGCTAT+GGG 0.536764 tig0016544:+56583 Msa1358890:CDS
TTCTCAGAGAAAGCTACACC+TGG 0.537382 tig0016544:+57829 Msa1358890:intron
GCAAGAAGTTGAAACAGAAT+GGG 0.537385 tig0016544:-57898 None:intergenic
TTACAGCCCCAGGAATGAGT+TGG 0.537964 tig0016544:+49251 Msa1358890:CDS
AGCAGCATTCTTCTCCAGAT+CGG 0.542200 tig0016544:-56572 None:intergenic
CTAAGCTCATATAGCAATGA+CGG 0.542352 tig0016544:-58066 None:intergenic
ACAACTAGAAAGTGATTTGT+CGG 0.544339 tig0016544:-49301 None:intergenic
GCACTCCTCGTCACTATCCA+TGG 0.550146 tig0016544:-47858 None:intergenic
AGAGATAATGCAATCAAGAC+AGG 0.553032 tig0016544:+52963 Msa1358890:CDS
AGACATCTTTGACGACATGA+TGG 0.557106 tig0016544:+57385 Msa1358890:CDS
TTCCATACAAACATCCTGCA+AGG 0.560101 tig0016544:+49330 Msa1358890:CDS
TGAGTCGTCCATTTGGACAC+AGG 0.564379 tig0016544:-56863 None:intergenic
CATTATCTCTTCAAACAGCA+AGG 0.565535 tig0016544:-52950 None:intergenic
TTTCTTACTTCACTCACTTG+CGG 0.566160 tig0016544:+47152 Msa1358890:five_prime_UTR
CTCAGAAATGATAATGGACA+CGG 0.571725 tig0016544:-49703 None:intergenic
GCATGCTCAGTATGATGAGT+TGG 0.574500 tig0016544:+55808 Msa1358890:CDS
AGATGATCCAATAATGGAGA+GGG 0.579934 tig0016544:-56941 None:intergenic
TTCCTCCAGAGATTTACACT+TGG 0.582164 tig0016544:+55864 Msa1358890:CDS
TTGCCATAGTGTGTAATATG+TGG 0.582672 tig0016544:-56501 None:intergenic
AGAAGAACACCTGATTGAGT+GGG 0.587488 tig0016544:+49443 Msa1358890:CDS
AGAAATTACTACGATGTAAG+GGG 0.589340 tig0016544:+48830 Msa1358890:intron
GGGGACCAAAACAATATGAA+GGG 0.590986 tig0016544:+49390 Msa1358890:CDS
TCCATACAAACATCCTGCAA+GGG 0.600641 tig0016544:+49331 Msa1358890:CDS
ATGAAGATAATGTATTCAGA+TGG 0.601114 tig0016544:+55929 Msa1358890:CDS
GATGTTGAAGGAGCAGGCCG+GGG 0.613770 tig0016544:+49630 Msa1358890:intron
TGATTAAGAAAGCCAGCAAG+AGG 0.615019 tig0016544:-55974 None:intergenic
TTCGCTGTACCATATGGTCG+AGG 0.616113 tig0016544:-58092 None:intergenic
TCCCAAGTGTAAATCTCTGG+AGG 0.620554 tig0016544:-55866 None:intergenic
TTAATCCTGTCTTTACACCA+TGG 0.622253 tig0016544:-49473 None:intergenic
CATTCTTCTCCAGATCGGCA+TGG 0.630402 tig0016544:-56567 None:intergenic
GAGCCTCCAACTCATTCCTG+GGG 0.630829 tig0016544:-49257 None:intergenic
TGCTGAAGACGATGCCTCGG+TGG 0.645814 tig0016544:+49224 Msa1358890:CDS
TGGACGACTCACATGGTGCG+TGG 0.646565 tig0016544:+56875 Msa1358890:CDS
AGAAAGTACCAGAACACGGT+AGG 0.646932 tig0016544:-47247 None:intergenic
CTAAAGGAATGACATCATAC+GGG 0.653617 tig0016544:-56662 None:intergenic
AGGATGTTTGTATGGAAATG+TGG 0.655140 tig0016544:-49324 None:intergenic
TCAGAAATGATAATGGACAC+GGG 0.657279 tig0016544:-49702 None:intergenic
CAAGCAACTGTTTCTTACCG+GGG 0.660127 tig0016544:-58171 None:intergenic
TGCCATAGTGTGTAATATGT+GGG 0.660167 tig0016544:-56500 None:intergenic
CAGGCCGGGGAATGATAGCA+GGG 0.660857 tig0016544:+49643 Msa1358890:CDS
AAGATGATCCAATAATGGAG+AGG 0.665042 tig0016544:-56942 None:intergenic
TGCAGCCATGGATAGTGACG+AGG 0.679797 tig0016544:+47853 Msa1358890:intron
GTCCAAATGGACGACTCACA+TGG 0.681562 tig0016544:+56868 Msa1358890:CDS
TCTCAGAGAAAGCTACACCT+GGG 0.684262 tig0016544:+57830 Msa1358890:intron
TCATACGGGTTGTCTCCTTG+AGG 0.685652 tig0016544:-56648 None:intergenic
ATTGAGTGGGGTAAAAGCCA+TGG 0.686263 tig0016544:+49456 Msa1358890:CDS
GACGACATGATGGACAGTAT+GGG 0.690308 tig0016544:+57395 Msa1358890:CDS
GAAGAACACCTGATTGAGTG+GGG 0.693168 tig0016544:+49444 Msa1358890:CDS
ACTGCACAAGTGTTTGGCTG+AGG 0.693657 tig0016544:+57950 Msa1358890:CDS
TCCAAATTAAATCTACCGCG+TGG 0.697660 tig0016544:-57992 None:intergenic
ATTCATCCAAGAAGGTCCTG+AGG 0.699592 tig0016544:-48887 None:intergenic
TGTATTCAGATGGAAAACTG+AGG 0.723155 tig0016544:+55939 Msa1358890:CDS
AAGAATCATACAGTTAAACG+AGG 0.733021 tig0016544:+48939 Msa1358890:CDS
GGGGCTGTAAAACTCCACCG+AGG 0.821008 tig0016544:-49238 None:intergenic
TGTAGGTTAATCGATCCACG+CGG 0.875211 tig0016544:+57977 Msa1358890:exon

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!!! AGAAAGTATTTTATTTAAAA+TGG + tig0016544:49773-49792 Msa1358890:intron 10.0%
!!! TCATTTTCTTAAATTATTAT+CGG - tig0016544:50011-50030 None:intergenic 10.0%
!! TTTCTTAAAATAAATTGAAA+AGG + tig0016544:50209-50228 Msa1358890:intron 10.0%
!! TTATTGAATTTAATATCTAT+AGG + tig0016544:51546-51565 Msa1358890:intron 10.0%
!! ATAACTGTAATTATAATAAA+GGG - tig0016544:52628-52647 None:intergenic 10.0%
!! AAAAAAAAATTTAAGGAAAA+GGG - tig0016544:54055-54074 None:intergenic 10.0%
!! AAAAAAAAAATTTAAGGAAA+AGG - tig0016544:54056-54075 None:intergenic 10.0%
!! TTAAGAAAAATAATATATTG+AGG - tig0016544:56451-56470 None:intergenic 10.0%
!!! ATAAATGATTTTTAAAATAG+TGG + tig0016544:57503-57522 Msa1358890:intron 10.0%
! GGGGGGGGGGGGGGGGGGGG+TGG - tig0016544:51017-51036 None:intergenic 100.0%
! GGGGGGGGGGGGGGGGGGGG+GGG - tig0016544:51017-51036 None:intergenic 100.0%
! GGGGGGGGGGGGGGGGGGGG+GGG - tig0016544:51017-51036 None:intergenic 100.0%
! GGGGGGGGGGGGGGGGGGGG+GGG - tig0016544:51017-51036 None:intergenic 100.0%
!!! TTAAATGATATTACTGATTT+TGG + tig0016544:47654-47673 Msa1358890:intron 15.0%
!!! TTTGATTTAATTTCTGATTT+TGG + tig0016544:49369-49388 Msa1358890:CDS 15.0%
!!! TTGATTTAATTTCTGATTTT+GGG + tig0016544:49370-49389 Msa1358890:CDS 15.0%
!!! ACTTTCTCATTTTTTAATAA+GGG - tig0016544:49760-49779 None:intergenic 15.0%
!!! TACTTTCTCATTTTTTAATA+AGG - tig0016544:49761-49780 None:intergenic 15.0%
!! AATTTATATTCAATTCAACT+CGG - tig0016544:49812-49831 None:intergenic 15.0%
!! ATGAATTCAGTTATAATTAT+AGG + tig0016544:50027-50046 Msa1358890:intron 15.0%
!! TTATACTTGAAGAATTTATT+TGG + tig0016544:50566-50585 Msa1358890:intron 15.0%
!!! ATTTTTCATAAACCATTAAA+AGG - tig0016544:51162-51181 None:intergenic 15.0%
!!! TTTTAATGGTTTATGAAAAA+TGG + tig0016544:51161-51180 Msa1358890:intron 15.0%
!!! TTAATGACATTGATTATTTA+CGG - tig0016544:51470-51489 None:intergenic 15.0%
!! GATAACTGTAATTATAATAA+AGG - tig0016544:52629-52648 None:intergenic 15.0%
!! AATAGAAAAATAAGAATAGA+AGG - tig0016544:53261-53280 None:intergenic 15.0%
!!! TGTAATTTAAGAATGTTTTT+GGG - tig0016544:53665-53684 None:intergenic 15.0%
!!! TTGTAATTTAAGAATGTTTT+TGG - tig0016544:53666-53685 None:intergenic 15.0%
!!! AGTGTAATTTTTCAAAATAA+AGG - tig0016544:53696-53715 None:intergenic 15.0%
!! TTTATGAAAGAATAATAGAT+AGG - tig0016544:54497-54516 None:intergenic 15.0%
!!! TAAACATATTTACTTTTATC+TGG + tig0016544:54845-54864 Msa1358890:intron 15.0%
!! ACAAATCCTTAAAATAATTA+GGG - tig0016544:54884-54903 None:intergenic 15.0%
!! TAATTTAATATAAAATGCAC+AGG + tig0016544:54993-55012 Msa1358890:intron 15.0%
!! TAAAGTCAAAAAAATAACTT+AGG + tig0016544:55412-55431 Msa1358890:intron 15.0%
!!! TATTTTTCTTAATTCACTTT+TGG + tig0016544:56459-56478 Msa1358890:intron 15.0%
!!! TCTCATTTTATTACATTTTA+TGG + tig0016544:56618-56637 Msa1358890:CDS 15.0%
!! AAATAAAAGAAAAAAGTTGA+GGG - tig0016544:57089-57108 None:intergenic 15.0%
!! AAAATAAAAGAAAAAAGTTG+AGG - tig0016544:57090-57109 None:intergenic 15.0%
!! TATTTGGTAGATTAAAAATT+CGG - tig0016544:57304-57323 None:intergenic 15.0%
!!! AGTTTTAATTGAATTGATTT+TGG + tig0016544:57464-57483 Msa1358890:intron 15.0%
!! ATTTAATATTTGATACTGTT+TGG + tig0016544:57541-57560 Msa1358890:intron 15.0%
!!! TTTTTAGCATGTATTGTTAT+AGG + tig0016544:47597-47616 Msa1358890:intron 20.0%
!! GGAATTATTTGATTAAGATA+TGG + tig0016544:47675-47694 Msa1358890:intron 20.0%
!! ATACAAAATCAGTAATATCA+AGG - tig0016544:47712-47731 None:intergenic 20.0%
!!! CATGATAAAAAGTTTTGTAA+AGG + tig0016544:48096-48115 Msa1358890:intron 20.0%
!! ATTAGTCATTACAGTATAAA+TGG - tig0016544:48791-48810 None:intergenic 20.0%
!!! AATTTTTTAACAAGATGTGT+GGG - tig0016544:49066-49085 None:intergenic 20.0%
!!! TGATTTAATTTCTGATTTTG+GGG + tig0016544:49371-49390 Msa1358890:CDS 20.0%
!! TTCAAATATAAATGTCACAT+AGG + tig0016544:49866-49885 Msa1358890:intron 20.0%
!! TAATTCAATTATGTTGTAAG+GGG - tig0016544:50163-50182 None:intergenic 20.0%
!! GTAATTCAATTATGTTGTAA+GGG - tig0016544:50164-50183 None:intergenic 20.0%
!! TGTAATTCAATTATGTTGTA+AGG - tig0016544:50165-50184 None:intergenic 20.0%
!!! TTTAAGAAATAATGTTGCTT+AGG - tig0016544:50198-50217 None:intergenic 20.0%
!!! TAACCTGTATTAAATTTTTC+TGG - tig0016544:50444-50463 None:intergenic 20.0%
!!! AGCTAATTTAGTATTTTCTT+TGG - tig0016544:50821-50840 None:intergenic 20.0%
!!! TAAATTAGCTCTAAATTCAA+AGG + tig0016544:50831-50850 Msa1358890:intron 20.0%
!!! TATTATTCATGTCCTTTTAA+TGG + tig0016544:51147-51166 Msa1358890:intron 20.0%
!! TGATAGTTGATTGAATTATA+AGG + tig0016544:51241-51260 Msa1358890:intron 20.0%
!! GATAGTTGATTGAATTATAA+GGG + tig0016544:51242-51261 Msa1358890:intron 20.0%
!!! GACTATAAACTCAATATTTT+GGG + tig0016544:51271-51290 Msa1358890:intron 20.0%
!!! ACTATAAACTCAATATTTTG+GGG + tig0016544:51272-51291 Msa1358890:intron 20.0%
!!! TAATGACATTGATTATTTAC+GGG - tig0016544:51469-51488 None:intergenic 20.0%
!!! AGAACTTTTTTTTTTTGTGA+TGG + tig0016544:51765-51784 Msa1358890:intron 20.0%
!! AGGATTAACATATCAAAAAA+AGG + tig0016544:52208-52227 Msa1358890:intron 20.0%
!! GGATTAACATATCAAAAAAA+GGG + tig0016544:52209-52228 Msa1358890:intron 20.0%
!! GATTAACATATCAAAAAAAG+GGG + tig0016544:52210-52229 Msa1358890:intron 20.0%
!! TATATATGACATCTACAAAA+TGG + tig0016544:52280-52299 Msa1358890:intron 20.0%
!! CTCTTGATGTATTATTATAA+GGG + tig0016544:52427-52446 Msa1358890:intron 20.0%
!!! TTTTTTATCTTCTTAACAAG+TGG - tig0016544:52478-52497 None:intergenic 20.0%
!! TGGGAAAGAAAATATAATAA+AGG - tig0016544:52855-52874 None:intergenic 20.0%
!! TCAAAGATATTTGAAAACAT+GGG - tig0016544:52874-52893 None:intergenic 20.0%
!! ATCAAAGATATTTGAAAACA+TGG - tig0016544:52875-52894 None:intergenic 20.0%
!!! ATCTTTGATATTTAATTTGC+AGG + tig0016544:52886-52905 Msa1358890:intron 20.0%
!! TTCAATGTAAAAACAATAGA+AGG - tig0016544:53010-53029 None:intergenic 20.0%
!!! TTCTATTGTTTTTACATTGA+AGG + tig0016544:53009-53028 Msa1358890:intron 20.0%
!! TAAATCCTGAATAAACAAAT+TGG - tig0016544:53076-53095 None:intergenic 20.0%
!!! AATTTGTTTATTCAGGATTT+AGG + tig0016544:53075-53094 Msa1358890:intron 20.0%
!!! TTGATCTTGTTAATTTTAAG+TGG + tig0016544:53101-53120 Msa1358890:intron 20.0%
!! TTAGAATTACTTAGAATAGA+TGG - tig0016544:53309-53328 None:intergenic 20.0%
!! TTTAAATGATGGTTCATTTA+AGG + tig0016544:53434-53453 Msa1358890:intron 20.0%
!! TTAAATGATGGTTCATTTAA+GGG + tig0016544:53435-53454 Msa1358890:intron 20.0%
!!! ATTTTGAAAATGATGGATTT+CGG - tig0016544:53493-53512 None:intergenic 20.0%
!! GAAAAATTGATAAAGTGTAA+TGG + tig0016544:53618-53637 Msa1358890:intron 20.0%
!!! GTAATTTTTCAAAATAAAGG+AGG - tig0016544:53693-53712 None:intergenic 20.0%
!!! GTTTTAAACTTCATCTATTT+TGG - tig0016544:54296-54315 None:intergenic 20.0%
!!! TTTTATCTTTTAGAAACTCT+CGG - tig0016544:54336-54355 None:intergenic 20.0%
!! GACAAATCCTTAAAATAATT+AGG - tig0016544:54885-54904 None:intergenic 20.0%
!!! TAGAAAAACCCTTATTTTAA+AGG + tig0016544:55071-55090 Msa1358890:intron 20.0%
!!! CCTATTATCCTTTAAAATAA+GGG - tig0016544:55082-55101 None:intergenic 20.0%
!!! TCCTATTATCCTTTAAAATA+AGG - tig0016544:55083-55102 None:intergenic 20.0%
!!! GATAAAACCAAATTTAAAAC+TGG - tig0016544:55602-55621 None:intergenic 20.0%
!! TTTAATATCCAATCCATAAA+TGG + tig0016544:55680-55699 Msa1358890:intron 20.0%
!! GTTATTTATCACTTTCAATA+AGG + tig0016544:56102-56121 Msa1358890:intron 20.0%
!! GATGGAATTTCAAAATAAAA+TGG + tig0016544:56136-56155 Msa1358890:intron 20.0%
!!! AATTTCAATGAATTTGTTGA+AGG - tig0016544:56534-56553 None:intergenic 20.0%
!! AATAACATTGAAACTATAGT+AGG - tig0016544:57233-57252 None:intergenic 20.0%
!!! AATGATTTTTAAAATAGTGG+AGG + tig0016544:57506-57525 Msa1358890:intron 20.0%
!! AGGTCTAAAAATGAAAAATT+GGG + tig0016544:57577-57596 Msa1358890:intron 20.0%
!! ATATGTCAAAATCTAAACTA+AGG - tig0016544:58018-58037 None:intergenic 20.0%
!!! TTTAGATTTTGACATATTGA+TGG + tig0016544:58021-58040 Msa1358890:three_prime_UTR 20.0%
!!! TCTTTAGGTTAAAAAATGTT+TGG + tig0016544:58128-58147 Msa1358890:three_prime_UTR 20.0%
!!! TCATTACATTATCTTTGAAA+TGG + tig0016544:58294-58313 Msa1358890:three_prime_UTR 20.0%
!! AAAATGATTGCACATTTTCT+CGG - tig0016544:47334-47353 None:intergenic 25.0%
! AGGATGTACAAATTGAATAT+CGG - tig0016544:47403-47422 None:intergenic 25.0%
! AATTCAAATTCATAAATGCG+AGG - tig0016544:47423-47442 None:intergenic 25.0%
! AAAAAATGAAGATGCATTTC+TGG - tig0016544:47537-47556 None:intergenic 25.0%
! CATGTATTGTTATAGGTTTA+TGG + tig0016544:47604-47623 Msa1358890:intron 25.0%
! ATAGGTTTATGGATAAAGTT+TGG + tig0016544:47615-47634 Msa1358890:intron 25.0%
!!! TACTGATTTTGTATTATAGC+TGG + tig0016544:47718-47737 Msa1358890:intron 25.0%
!!! GCATCATTTTTTAGTGATTA+AGG - tig0016544:48038-48057 None:intergenic 25.0%
!! TTTTGTTGAATCATACCATA+TGG - tig0016544:48068-48087 None:intergenic 25.0%
! TTTGTAAAGGAAAGTTCTAT+CGG + tig0016544:48109-48128 Msa1358890:intron 25.0%
!!! TAGAAAAGTTGGTAGAAAAT+AGG + tig0016544:48307-48326 Msa1358890:intron 25.0%
! GTTCTATCAAAAACCATATT+TGG - tig0016544:48489-48508 None:intergenic 25.0%
! CAAATGTGAGAAAAATTAAG+CGG + tig0016544:48622-48641 Msa1358890:intron 25.0%
! AATAAAACCATAAGCAGTTA+AGG - tig0016544:48753-48772 None:intergenic 25.0%
! TTATACTGTAATGACTAATC+TGG + tig0016544:48792-48811 Msa1358890:intron 25.0%
!!! ATTTTTTAACAAGATGTGTG+GGG - tig0016544:49065-49084 None:intergenic 25.0%
!!! GAATTTTTTAACAAGATGTG+TGG - tig0016544:49067-49086 None:intergenic 25.0%
! CTTCAAATAATATGCAATCA+AGG + tig0016544:49095-49114 Msa1358890:intron 25.0%
! TAAAGATAATACATGTGCAA+AGG - tig0016544:49570-49589 None:intergenic 25.0%
! TGAAATACAGAAGATAAGTA+AGG - tig0016544:49850-49869 None:intergenic 25.0%
! TCTTAAATTATTATCGGTGT+CGG - tig0016544:50005-50024 None:intergenic 25.0%
! AAAAGTTATTAAGAACACAG+TGG - tig0016544:50255-50274 None:intergenic 25.0%
! CTTCCAGAAAAATTTAATAC+AGG + tig0016544:50438-50457 Msa1358890:CDS 25.0%
!!! AACTTAAGTAATAGCTTTGA+TGG + tig0016544:50939-50958 Msa1358890:intron 25.0%
!! TTTCCTTGTTTGTAATTGTT+AGG + tig0016544:51200-51219 Msa1358890:intron 25.0%
!! TTCCTTGTTTGTAATTGTTA+GGG + tig0016544:51201-51220 Msa1358890:intron 25.0%
! GATTGAATTATAAGGGTAAA+TGG + tig0016544:51249-51268 Msa1358890:intron 25.0%
!! GGACTATAAACTCAATATTT+TGG + tig0016544:51270-51289 Msa1358890:intron 25.0%
!! ATAACAACCAGATCAATTTT+AGG - tig0016544:51377-51396 None:intergenic 25.0%
!! CAACTGATTTACACATAAAT+TGG - tig0016544:51504-51523 None:intergenic 25.0%
! AAATTCAATAAACCAACAAG+TGG - tig0016544:51537-51556 None:intergenic 25.0%
! GATTAAATTATCCAAATGGT+TGG - tig0016544:51664-51683 None:intergenic 25.0%
! TCTGGATTAAATTATCCAAA+TGG - tig0016544:51668-51687 None:intergenic 25.0%
! TTGGATAATTTAATCCAGAA+AGG + tig0016544:51669-51688 Msa1358890:intron 25.0%
!! TGAAGTACAATTTTATGCTT+TGG + tig0016544:51832-51851 Msa1358890:intron 25.0%
! ACAAATAATGACAATGATGA+TGG - tig0016544:51925-51944 None:intergenic 25.0%
! TCATCATTGTCATTATTTGT+TGG + tig0016544:51925-51944 Msa1358890:intron 25.0%
!!! TTGTCATTATTTGTTGGTTT+CGG + tig0016544:51931-51950 Msa1358890:intron 25.0%
! GTTATACAATCACACATTAT+TGG + tig0016544:52090-52109 Msa1358890:intron 25.0%
! TTGAAATTCTTTCAATCCTA+AGG + tig0016544:52181-52200 Msa1358890:intron 25.0%
! TGAAATTCTTTCAATCCTAA+GGG + tig0016544:52182-52201 Msa1358890:intron 25.0%
!!! GATAAGGTAAGTTTTAACTA+TGG + tig0016544:52245-52264 Msa1358890:intron 25.0%
! CCTTATAATAATACATCAAG+AGG - tig0016544:52429-52448 None:intergenic 25.0%
! CCTCTTGATGTATTATTATA+AGG + tig0016544:52426-52445 Msa1358890:intron 25.0%
! ACTATTTGTTCATTATCTCT+TGG + tig0016544:52686-52705 Msa1358890:intron 25.0%
! ACAAATTGGTGAAGTTTAAT+AGG - tig0016544:53062-53081 None:intergenic 25.0%
! TGTTAGGATAAAGAATAAAG+GGG - tig0016544:53343-53362 None:intergenic 25.0%
! GTGTTAGGATAAAGAATAAA+GGG - tig0016544:53344-53363 None:intergenic 25.0%
! TGTGTTAGGATAAAGAATAA+AGG - tig0016544:53345-53364 None:intergenic 25.0%
!! TTTTCAATTCGTAGTTATCA+GGG - tig0016544:53380-53399 None:intergenic 25.0%
!! ATTTTCAATTCGTAGTTATC+AGG - tig0016544:53381-53400 None:intergenic 25.0%
!!! GGAGATTATTTTGAAAATGA+TGG - tig0016544:53500-53519 None:intergenic 25.0%
!!! TTTAAGAATGTTTTTGGGAA+GGG - tig0016544:53660-53679 None:intergenic 25.0%
!!! ATTTAAGAATGTTTTTGGGA+AGG - tig0016544:53661-53680 None:intergenic 25.0%
!!! TATTTCACTTTCTAAAGTTG+AGG - tig0016544:54206-54225 None:intergenic 25.0%
!!! ATCTATTTTGGAACTTTAGA+AGG - tig0016544:54284-54303 None:intergenic 25.0%
! GTACTTATTTATAGTGCTAA+AGG + tig0016544:54578-54597 Msa1358890:intron 25.0%
! TTTATAATCCAATCCATATC+AGG - tig0016544:54829-54848 None:intergenic 25.0%
!!! GAACAACCCTAATTATTTTA+AGG + tig0016544:54875-54894 Msa1358890:intron 25.0%
!!! CCCTTATTTTAAAGGATAAT+AGG + tig0016544:55079-55098 Msa1358890:intron 25.0%
! AGACACATGCTATTAAAAAA+TGG + tig0016544:55162-55181 Msa1358890:intron 25.0%
! CATGCTATTAAAAAATGGTA+AGG + tig0016544:55167-55186 Msa1358890:intron 25.0%
! AAAAATTAGAACCACACTAT+AGG - tig0016544:55239-55258 None:intergenic 25.0%
! GTCAAAAAAATAACTTAGGT+TGG + tig0016544:55416-55435 Msa1358890:intron 25.0%
!!! TCTAACAACTTTTTTCTCTT+TGG - tig0016544:55660-55679 None:intergenic 25.0%
! ATACATTATCTTCATGCTAT+TGG - tig0016544:55924-55943 None:intergenic 25.0%
! ATGAAGATAATGTATTCAGA+TGG + tig0016544:55929-55948 Msa1358890:CDS 25.0%
! AGAATATGCTATTCTTGAAA+AGG - tig0016544:56172-56191 None:intergenic 25.0%
! TATGCAGCAAAACAAATAAT+GGG - tig0016544:56209-56228 None:intergenic 25.0%
! ATATGCAGCAAAACAAATAA+TGG - tig0016544:56210-56229 None:intergenic 25.0%
! AAATGTAATAAAATGAGAGC+TGG - tig0016544:56616-56635 None:intergenic 25.0%
! AGGGTAATAATATTACCTAA+AGG - tig0016544:56681-56700 None:intergenic 25.0%
! CAACAAAGAACCATTAAATT+CGG - tig0016544:56750-56769 None:intergenic 25.0%
! AATCACAGCATATTCTATTA+TGG + tig0016544:56914-56933 Msa1358890:CDS 25.0%
! GAAAACAAATTAAGAGTCAA+GGG - tig0016544:57021-57040 None:intergenic 25.0%
! TGAAAACAAATTAAGAGTCA+AGG - tig0016544:57022-57041 None:intergenic 25.0%
! AATTTCATAACAACAGAATG+CGG - tig0016544:57065-57084 None:intergenic 25.0%
!!! ATATTTTATTTCTCTGCAGA+AGG - tig0016544:57162-57181 None:intergenic 25.0%
! AAAAATTCGGCTGTAAAATT+CGG - tig0016544:57291-57310 None:intergenic 25.0%
! GAGGTCTAAAAATGAAAAAT+TGG + tig0016544:57576-57595 Msa1358890:intron 25.0%
! ATCAATTCTACTCACATAAA+AGG + tig0016544:57609-57628 Msa1358890:intron 25.0%
!!! TTGATTTTAGTAGACTCTAA+TGG + tig0016544:57708-57727 Msa1358890:intron 25.0%
!!! TACATGATTTGTTTCAGTAA+AGG - tig0016544:57782-57801 None:intergenic 25.0%
!!! AAGCTTAGAGTTTTTTCTTT+AGG + tig0016544:58113-58132 Msa1358890:three_prime_UTR 25.0%
!!! CAGAATTTATTTTTTTTCCC+CGG + tig0016544:58154-58173 Msa1358890:three_prime_UTR 25.0%
!!! TACATTATCTTTGAAATGGA+TGG + tig0016544:58298-58317 Msa1358890:three_prime_UTR 25.0%
!! AAAAAGAAAGTACCAGAACA+CGG - tig0016544:47254-47273 None:intergenic 30.0%
TTATATCATGTACAAACCCT+AGG - tig0016544:47502-47521 None:intergenic 30.0%
ATCAGTAATATCAAGGTATG+AGG - tig0016544:47705-47724 None:intergenic 30.0%
TCCTTTCTTTGATGAAAAGA+AGG + tig0016544:47910-47929 Msa1358890:CDS 30.0%
! ACCTTCTTTTCATCAAAGAA+AGG - tig0016544:47914-47933 None:intergenic 30.0%
! TCTACCAACTTTTCTACTAT+AGG - tig0016544:48303-48322 None:intergenic 30.0%
TTGATCTACTCTTCTTACAA+CGG - tig0016544:48373-48392 None:intergenic 30.0%
TGTAAGAAGAGTAGATCAAA+TGG + tig0016544:48374-48393 Msa1358890:intron 30.0%
! GTTTCTCTAATGGTTTTCTT+AGG - tig0016544:48432-48451 None:intergenic 30.0%
! TTTTCGAATGGTTTCTCTAA+TGG - tig0016544:48442-48461 None:intergenic 30.0%
AACCATTCGAAAAGATTTAG+AGG + tig0016544:48449-48468 Msa1358890:intron 30.0%
! TGGTTTTTGATAGAACACTA+TGG + tig0016544:48493-48512 Msa1358890:intron 30.0%
CATTACAGTATAAATGGCTT+TGG - tig0016544:48785-48804 None:intergenic 30.0%
TCAGAAATTACTACGATGTA+AGG + tig0016544:48828-48847 Msa1358890:intron 30.0%
CAGAAATTACTACGATGTAA+GGG + tig0016544:48829-48848 Msa1358890:intron 30.0%
AGAAATTACTACGATGTAAG+GGG + tig0016544:48830-48849 Msa1358890:intron 30.0%
AAGAATCATACAGTTAAACG+AGG + tig0016544:48939-48958 Msa1358890:CDS 30.0%
TCTAAGGAGAAACTATAGTT+AGG + tig0016544:49014-49033 Msa1358890:intron 30.0%
CTAAGGAGAAACTATAGTTA+GGG + tig0016544:49015-49034 Msa1358890:intron 30.0%
! ACAACTAGAAAGTGATTTGT+CGG - tig0016544:49304-49323 None:intergenic 30.0%
ATAATACATGTGCAAAGGAA+AGG - tig0016544:49565-49584 None:intergenic 30.0%
TTAATCTACACAGATGTTGA+AGG + tig0016544:49618-49637 Msa1358890:intron 30.0%
! TATAATTATAGGTGTCGTGT+CGG + tig0016544:50038-50057 Msa1358890:intron 30.0%
TAACACTAAAAAAAAGGCCT+AGG - tig0016544:50597-50616 None:intergenic 30.0%
GAGGGATAACACTAAAAAAA+AGG - tig0016544:50603-50622 None:intergenic 30.0%
!!! TTTTTTTAGTGTTATCCCTC+CGG + tig0016544:50603-50622 Msa1358890:intron 30.0%
ACCTATTATATAGGTTCCTT+GGG + tig0016544:50857-50876 Msa1358890:intron 30.0%
GCTATTACTTAAGTTCCATA+TGG - tig0016544:50934-50953 None:intergenic 30.0%
ATCAAACGAACAAAAGTAAC+AGG - tig0016544:51054-51073 None:intergenic 30.0%
! TCCTTGTTTGTAATTGTTAG+GGG + tig0016544:51202-51221 Msa1358890:intron 30.0%
TAATTGTTAGGGGAAAAACT+TGG + tig0016544:51212-51231 Msa1358890:intron 30.0%
TAGTATTTCCACTAGAAAGA+AGG - tig0016544:51322-51341 None:intergenic 30.0%
ATCATGGTGTAATAATGCTT+TGG + tig0016544:51347-51366 Msa1358890:intron 30.0%
ATATCTATAGGCCTATAACT+TGG + tig0016544:51558-51577 Msa1358890:intron 30.0%
ATCTATGTAAGTTCAGTGTA+GGG + tig0016544:51701-51720 Msa1358890:intron 30.0%
! TCCATACAAGTTTTACATGA+TGG + tig0016544:52067-52086 Msa1358890:intron 30.0%
! CCATACAAGTTTTACATGAT+GGG + tig0016544:52068-52087 Msa1358890:intron 30.0%
! AATGAGGAAGCTTTTATCTT+GGG - tig0016544:52573-52592 None:intergenic 30.0%
! TAATGAGGAAGCTTTTATCT+TGG - tig0016544:52574-52593 None:intergenic 30.0%
! ACTTGTTAAGAAGTCTAATG+AGG - tig0016544:52589-52608 None:intergenic 30.0%
ATAAAGGGAAATGCTAACAA+GGG - tig0016544:52613-52632 None:intergenic 30.0%
AATAAAGGGAAATGCTAACA+AGG - tig0016544:52614-52633 None:intergenic 30.0%
GAAATGATATATCAAGAGCA+AGG + tig0016544:52756-52775 Msa1358890:intron 30.0%
!! TAATTTGCAGGATTGAGTTT+TGG + tig0016544:52898-52917 Msa1358890:intron 30.0%
! AATTTGCAGGATTGAGTTTT+GGG + tig0016544:52899-52918 Msa1358890:intron 30.0%
! CTTCACCAATTTGTTTATTC+AGG + tig0016544:53068-53087 Msa1358890:intron 30.0%
!! ATTTTAAGTGGCAATGTGTA+AGG + tig0016544:53113-53132 Msa1358890:intron 30.0%
TTTAATAGCTCGTGAGTAAA+GGG - tig0016544:53232-53251 None:intergenic 30.0%
ATTTAATAGCTCGTGAGTAA+AGG - tig0016544:53233-53252 None:intergenic 30.0%
! GAATAGATGGTTAGTTAGAA+GGG - tig0016544:53296-53315 None:intergenic 30.0%
! AGAATAGATGGTTAGTTAGA+AGG - tig0016544:53297-53316 None:intergenic 30.0%
GTTAGGATAAAGAATAAAGG+GGG - tig0016544:53342-53361 None:intergenic 30.0%
TTTCAATTCGTAGTTATCAG+GGG - tig0016544:53379-53398 None:intergenic 30.0%
GCAAATGATGTAAAGACATT+AGG - tig0016544:53521-53540 None:intergenic 30.0%
ATGTCTTTACATCATTTGCT+TGG + tig0016544:53522-53541 Msa1358890:intron 30.0%
TGTCTTTACATCATTTGCTT+GGG + tig0016544:53523-53542 Msa1358890:intron 30.0%
TCTAAGAACAATAAGCTTCT+TGG - tig0016544:53600-53619 None:intergenic 30.0%
GTATAAATGAATTTCGTAGC+AGG + tig0016544:53762-53781 Msa1358890:intron 30.0%
ATTATCAGGGAAATGATAAG+TGG - tig0016544:53972-53991 None:intergenic 30.0%
CACATGTATCAACATTATCA+GGG - tig0016544:53985-54004 None:intergenic 30.0%
! CTGATAATGTTGATACATGT+GGG + tig0016544:53984-54003 Msa1358890:intron 30.0%
TGTGGGTTCAATAATTTACA+CGG + tig0016544:54001-54020 Msa1358890:intron 30.0%
AAAATTTAAGGAAAAGGGCA+CGG - tig0016544:54050-54069 None:intergenic 30.0%
!!! TATTTTGGAACTTTAGAAGG+TGG - tig0016544:54281-54300 None:intergenic 30.0%
CTAAAAGATAAAAGCTTCGT+CGG + tig0016544:54343-54362 Msa1358890:intron 30.0%
AGAGCATATATTAATCCGTT+AGG + tig0016544:54388-54407 Msa1358890:intron 30.0%
GAGCATATATTAATCCGTTA+GGG + tig0016544:54389-54408 Msa1358890:intron 30.0%
ATTACTATAGGAAAGATTGC+AGG + tig0016544:54629-54648 Msa1358890:intron 30.0%
CTTAGATATCCAAAACCAAA+AGG - tig0016544:54779-54798 None:intergenic 30.0%
!! GTTTTGGATATCTAAGTACT+TGG + tig0016544:54783-54802 Msa1358890:intron 30.0%
!! TTTTAAGTCTTCACATGATG+TGG - tig0016544:55134-55153 None:intergenic 30.0%
CTCATGATTAATGCTTAGTT+TGG + tig0016544:55261-55280 Msa1358890:intron 30.0%
!! CTTAGTTTGGTTCTTGATAA+TGG + tig0016544:55274-55293 Msa1358890:intron 30.0%
!! AAAATAACTTAGGTTGGATG+TGG + tig0016544:55422-55441 Msa1358890:intron 30.0%
AAAATTTACCTACTAGAGGA+AGG - tig0016544:55537-55556 None:intergenic 30.0%
! TTCCTCTAGTAGGTAAATTT+TGG + tig0016544:55536-55555 Msa1358890:intron 30.0%
! AATGGGTTTAGAGACATTTA+AGG - tig0016544:55624-55643 None:intergenic 30.0%
TCTTCTATCCATTTATGGAT+TGG - tig0016544:55691-55710 None:intergenic 30.0%
ATCCATAAATGGATAGAAGA+TGG + tig0016544:55691-55710 Msa1358890:intron 30.0%
ATCCATCTTCTATCCATTTA+TGG - tig0016544:55696-55715 None:intergenic 30.0%
! AAATGGATAGAAGATGGATT+TGG + tig0016544:55697-55716 Msa1358890:intron 30.0%
TCATTCATTAAATGCAGGAA+GGG - tig0016544:55749-55768 None:intergenic 30.0%
ATCATTCATTAAATGCAGGA+AGG - tig0016544:55750-55769 None:intergenic 30.0%
! ATGTTGTTCTTTCTCTTTTG+TGG + tig0016544:55777-55796 Msa1358890:intron 30.0%
!!! ACACTTGGGAGAATTTTTTA+TGG + tig0016544:55879-55898 Msa1358890:CDS 30.0%
!!! CACTTGGGAGAATTTTTTAT+GGG + tig0016544:55880-55899 Msa1358890:CDS 30.0%
TAGACATTCAAAACCAATGA+CGG - tig0016544:56062-56081 None:intergenic 30.0%
AATAAGGAAGCAAAAGATGA+TGG + tig0016544:56118-56137 Msa1358890:intron 30.0%
CAAGAATAGCATATTCTTCT+AGG + tig0016544:56175-56194 Msa1358890:intron 30.0%
ACTTAAATCTCACCAATCAT+GGG - tig0016544:56256-56275 None:intergenic 30.0%
TACTTAAATCTCACCAATCA+TGG - tig0016544:56257-56276 None:intergenic 30.0%
CCAGTACAGAAATTAACAAA+TGG - tig0016544:56280-56299 None:intergenic 30.0%
! CCATTTGTTAATTTCTGTAC+TGG + tig0016544:56277-56296 Msa1358890:intron 30.0%
TTTGTTAATTTCTGTACTGG+TGG + tig0016544:56280-56299 Msa1358890:intron 30.0%
! TTGTTAATTTCTGTACTGGT+GGG + tig0016544:56281-56300 Msa1358890:intron 30.0%
GCCTGGATTATAAAATTTCA+AGG + tig0016544:56361-56380 Msa1358890:intron 30.0%
! GCCTTGAAATTTTATAATCC+AGG - tig0016544:56365-56384 None:intergenic 30.0%
AAATTTCAAGGCAATTTCTG+TGG + tig0016544:56373-56392 Msa1358890:intron 30.0%
! TTTTATGGTTTCTTACCTCA+AGG + tig0016544:56633-56652 Msa1358890:CDS 30.0%
CATAAGAATTGAGATACGTA+TGG - tig0016544:56715-56734 None:intergenic 30.0%
AGAACCATTAAATTCGGAAA+GGG - tig0016544:56744-56763 None:intergenic 30.0%
AAGAACCATTAAATTCGGAA+AGG - tig0016544:56745-56764 None:intergenic 30.0%
!! TTCTGATGTTGATTCTATTG+AGG + tig0016544:56835-56854 Msa1358890:CDS 30.0%
ATAGAATATGCTGTGATTGT+TGG - tig0016544:56912-56931 None:intergenic 30.0%
ATTTCATAACAACAGAATGC+GGG - tig0016544:57064-57083 None:intergenic 30.0%
TGCAATGCATAGAAAACTTT+CGG - tig0016544:57122-57141 None:intergenic 30.0%
TGCTTACTTGAATGCATATT+AGG + tig0016544:57200-57219 Msa1358890:intron 30.0%
AACTGTGGACGAAAAATATT+TGG - tig0016544:57320-57339 None:intergenic 30.0%
AAACTAAAGCATGAACTCTA+GGG - tig0016544:57449-57468 None:intergenic 30.0%
AAAACTAAAGCATGAACTCT+AGG - tig0016544:57450-57469 None:intergenic 30.0%
! TGTTTGGATAAACACTTTTG+AGG + tig0016544:57557-57576 Msa1358890:intron 30.0%
CGGGGAAAAAAAATAAATTC+TGG - tig0016544:58156-58175 None:intergenic 30.0%
CTAGACTTCAAAAGAATTTG+TGG - tig0016544:58212-58231 None:intergenic 30.0%
TTTCTTACTTCACTCACTTG+CGG + tig0016544:47152-47171 Msa1358890:five_prime_UTR 35.0%
AATGATGCAAGTCTTCCATA+TGG + tig0016544:48050-48069 Msa1358890:intron 35.0%
AGCACCTATAGTAGAAAAGT+TGG + tig0016544:48296-48315 Msa1358890:intron 35.0%
TGGTAGAAAATAGGCTTAGA+TGG + tig0016544:48316-48335 Msa1358890:intron 35.0%
GAAAATAGGCTTAGATGGTT+TGG + tig0016544:48321-48340 Msa1358890:intron 35.0%
AAGAAGAGTAGATCAAATGG+AGG + tig0016544:48377-48396 Msa1358890:intron 35.0%
! GACCTCTAAATCTTTTCGAA+TGG - tig0016544:48454-48473 None:intergenic 35.0%
AGATTTAGAGGTCAATGAGT+TGG + tig0016544:48461-48480 Msa1358890:intron 35.0%
! CAATGAGTTGGATCCAAATA+TGG + tig0016544:48473-48492 Msa1358890:intron 35.0%
TGAGAAAAATTAAGCGGCTA+AGG + tig0016544:48628-48647 Msa1358890:intron 35.0%
GAGAAAAATTAAGCGGCTAA+GGG + tig0016544:48629-48648 Msa1358890:intron 35.0%
TATATTGCCTTGAATAACGC+TGG - tig0016544:48667-48686 None:intergenic 35.0%
TTGAGATGTATCCATTCCTT+GGG - tig0016544:48862-48881 None:intergenic 35.0%
ACGATATCATTCATCCAAGA+AGG - tig0016544:48898-48917 None:intergenic 35.0%
AGATACACAGTATCACTCTA+AGG + tig0016544:48998-49017 Msa1358890:intron 35.0%
AGGATGTTTGTATGGAAATG+TGG - tig0016544:49327-49346 None:intergenic 35.0%
! GTACTCCCTTCATATTGTTT+TGG - tig0016544:49398-49417 None:intergenic 35.0%
TTAATCCTGTCTTTACACCA+TGG - tig0016544:49476-49495 None:intergenic 35.0%
!! TCAGAAATGATAATGGACAC+GGG - tig0016544:49705-49724 None:intergenic 35.0%
!! CTCAGAAATGATAATGGACA+CGG - tig0016544:49706-49725 None:intergenic 35.0%
AAGCTCCTCAGAAATGATAA+TGG - tig0016544:49712-49731 None:intergenic 35.0%
AGACGATACTGAATTGGATA+AGG - tig0016544:50315-50334 None:intergenic 35.0%
TTCAAGAGACGATACTGAAT+TGG - tig0016544:50321-50340 None:intergenic 35.0%
! CTGAGACAATATTGCTGTTA+TGG + tig0016544:50361-50380 Msa1358890:CDS 35.0%
!! GAATTTATTTGGTGCTTCCT+AGG + tig0016544:50577-50596 Msa1358890:intron 35.0%
CAAAGGACGACCTATTATAT+AGG + tig0016544:50848-50867 Msa1358890:intron 35.0%
GACCTATTATATAGGTTCCT+TGG + tig0016544:50856-50875 Msa1358890:intron 35.0%
ACCCAAGGAACCTATATAAT+AGG - tig0016544:50861-50880 None:intergenic 35.0%
ACAGAAAGAGTAATTACCCA+AGG - tig0016544:50876-50895 None:intergenic 35.0%
AGCAAGATACCTTTATGACT+CGG + tig0016544:50962-50981 Msa1358890:intron 35.0%
! TGTTCGTTTGATGATCTCTA+TGG + tig0016544:51062-51081 Msa1358890:intron 35.0%
TCCCCTAACAATTACAAACA+AGG - tig0016544:51206-51225 None:intergenic 35.0%
! CTTTCTAGTGGAAATACTAG+AGG + tig0016544:51323-51342 Msa1358890:intron 35.0%
TGGAAATACTAGAGGAATCA+TGG + tig0016544:51331-51350 Msa1358890:intron 35.0%
! ACAACCAGATCAATTTTAGG+AGG - tig0016544:51374-51393 None:intergenic 35.0%
AATATGTTATGCCTCTATGC+CGG - tig0016544:51403-51422 None:intergenic 35.0%
! ACATTGATTATTTACGGGTG+TGG - tig0016544:51464-51483 None:intergenic 35.0%
TGTATCAATCTACCACTTGT+TGG + tig0016544:51522-51541 Msa1358890:intron 35.0%
TTCCAACACAGCTAAGTTAT+GGG - tig0016544:51602-51621 None:intergenic 35.0%
!!! ATGGTTGGTTTTCTTGAAGT+TGG - tig0016544:51649-51668 None:intergenic 35.0%
CTTCAAGAAAACCAACCATT+TGG + tig0016544:51650-51669 Msa1358890:intron 35.0%
TAGATCTTGTAGTTCCTTTC+TGG - tig0016544:51686-51705 None:intergenic 35.0%
GATCTATGTAAGTTCAGTGT+AGG + tig0016544:51700-51719 Msa1358890:intron 35.0%
!! TTATTTGTTGGTTTCGGTTG+AGG + tig0016544:51937-51956 Msa1358890:intron 35.0%
!! TATTTGTTGGTTTCGGTTGA+GGG + tig0016544:51938-51957 Msa1358890:intron 35.0%
AATTGCTTGCTTCCTGATAT+AGG + tig0016544:51976-51995 Msa1358890:intron 35.0%
CCCATCATGTAAAACTTGTA+TGG - tig0016544:52071-52090 None:intergenic 35.0%
AAAAGAAACTTGACGCACTT+TGG + tig0016544:52121-52140 Msa1358890:intron 35.0%
TATGTTAATCCTGATCCCTT+AGG - tig0016544:52200-52219 None:intergenic 35.0%
CATATCAAAAAAAGGGGTTG+TGG + tig0016544:52216-52235 Msa1358890:intron 35.0%
GTTGAGATTTGTACATCAGA+TGG + tig0016544:52348-52367 Msa1358890:intron 35.0%
!! ATCTATTAGCTAGTCTTTCC+TGG + tig0016544:52376-52395 Msa1358890:intron 35.0%
!! TTGGTCTGTTCTGAAATCTA+TGG + tig0016544:52705-52724 Msa1358890:intron 35.0%
TATCAAGAGCAAGGTTAACT+AGG + tig0016544:52765-52784 Msa1358890:intron 35.0%
TTTACTGTTTACCTTAGCCT+AGG - tig0016544:52793-52812 None:intergenic 35.0%
TAGGCTAAGGTAAACAGTAA+AGG + tig0016544:52792-52811 Msa1358890:intron 35.0%
CATTATCTCTTCAAACAGCA+AGG - tig0016544:52953-52972 None:intergenic 35.0%
AGAGATAATGCAATCAAGAC+AGG + tig0016544:52963-52982 Msa1358890:CDS 35.0%
ACAATAGAAGGTTAGAACCT+GGG - tig0016544:52998-53017 None:intergenic 35.0%
AACAATAGAAGGTTAGAACC+TGG - tig0016544:52999-53018 None:intergenic 35.0%
GTTTACGACATCTCAAAGAA+AGG - tig0016544:53040-53059 None:intergenic 35.0%
TCTATTCATTTCAATCTCCC+CGG - tig0016544:53142-53161 None:intergenic 35.0%
CAATAGAAGTCTCTCTTCTA+AGG + tig0016544:53201-53220 Msa1358890:intron 35.0%
AATACATGCACTAATGCATG+TGG + tig0016544:53407-53426 Msa1358890:intron 35.0%
!! CATGTGGCTTGTTTAAATGA+TGG + tig0016544:53423-53442 Msa1358890:intron 35.0%
ACATTATCCTCTCTCTAGTA+AGG - tig0016544:53721-53740 None:intergenic 35.0%
! GTCTTTAGAAAGCTAGTTCA+TGG - tig0016544:53797-53816 None:intergenic 35.0%
CCACATGTATCAACATTATC+AGG - tig0016544:53986-54005 None:intergenic 35.0%
! CCTGATAATGTTGATACATG+TGG + tig0016544:53983-54002 Msa1358890:intron 35.0%
! AAATTTAAGGAAAAGGGCAC+GGG - tig0016544:54049-54068 None:intergenic 35.0%
AGGAACAGAAAATTAGCAAC+AGG - tig0016544:54182-54201 None:intergenic 35.0%
!! TCACTTTCTAAAGTTGAGGA+AGG - tig0016544:54202-54221 None:intergenic 35.0%
ATTACATGCTCATTCCCTAA+CGG - tig0016544:54406-54425 None:intergenic 35.0%
TGTAATTTAGACTTCACCCA+AGG + tig0016544:54420-54439 Msa1358890:intron 35.0%
GGGAATGTGATTTATCCTAA+TGG + tig0016544:54447-54466 Msa1358890:intron 35.0%
GCTGCTAGATATTATCCATT+AGG - tig0016544:54465-54484 None:intergenic 35.0%
AAAAGAATTAGGGTCAGCAA+TGG + tig0016544:54722-54741 Msa1358890:intron 35.0%
AGTACTTGGATATGTGTATC+CGG + tig0016544:54797-54816 Msa1358890:intron 35.0%
!! TGATGTGGTGTCATTCAAAA+TGG - tig0016544:55119-55138 None:intergenic 35.0%
TATGTCAATTTCACCATCAC+TGG - tig0016544:55309-55328 None:intergenic 35.0%
AATTCTTATGTGCCTATGTG+TGG + tig0016544:55334-55353 Msa1358890:intron 35.0%
ATTCTTATGTGCCTATGTGT+GGG + tig0016544:55335-55354 Msa1358890:intron 35.0%
CTCCAAAATTTACCTACTAG+AGG - tig0016544:55541-55560 None:intergenic 35.0%
! CAAATTTAAAACTGGCTGTG+TGG - tig0016544:55594-55613 None:intergenic 35.0%
!!! CACACAGCCAGTTTTAAATT+TGG + tig0016544:55592-55611 Msa1358890:intron 35.0%
AATGTCTCTAAACCCATTCA+TGG + tig0016544:55626-55645 Msa1358890:intron 35.0%
! GATAGAAGATGGATTTGGTA+TGG + tig0016544:55702-55721 Msa1358890:intron 35.0%
!! GATGGATTTGGTATGGATTT+TGG + tig0016544:55709-55728 Msa1358890:intron 35.0%
CATTCATTAAATGCAGGAAG+GGG - tig0016544:55748-55767 None:intergenic 35.0%
CGTCATCATTCATTAAATGC+AGG - tig0016544:55754-55773 None:intergenic 35.0%
! ATCTCTGGAGGAAATATATC+AGG - tig0016544:55857-55876 None:intergenic 35.0%
! TTTTATGGGCTTGTGAACTT+TGG + tig0016544:55894-55913 Msa1358890:CDS 35.0%
TGTATTCAGATGGAAAACTG+AGG + tig0016544:55939-55958 Msa1358890:CDS 35.0%
!!! GTCATTGGTTTTGAATGTCT+AGG + tig0016544:56061-56080 Msa1358890:intron 35.0%
!! ATAGCATATTCTTCTAGGAC+TGG + tig0016544:56180-56199 Msa1358890:intron 35.0%
!! TAGCATATTCTTCTAGGACT+GGG + tig0016544:56181-56200 Msa1358890:intron 35.0%
ATCATTAATGCACCCATGAT+TGG + tig0016544:56241-56260 Msa1358890:intron 35.0%
AGGTTACAGTGCAAATTATC+AGG - tig0016544:56414-56433 None:intergenic 35.0%
! TGATAATTTGCACTGTAACC+TGG + tig0016544:56413-56432 Msa1358890:intron 35.0%
TGCCATAGTGTGTAATATGT+GGG - tig0016544:56503-56522 None:intergenic 35.0%
TTGCCATAGTGTGTAATATG+TGG - tig0016544:56504-56523 None:intergenic 35.0%
! AAGAATGCTGCTTAAGCTAT+GGG + tig0016544:56583-56602 Msa1358890:CDS 35.0%
CTAAAGGAATGACATCATAC+GGG - tig0016544:56665-56684 None:intergenic 35.0%
CCTAAAGGAATGACATCATA+CGG - tig0016544:56666-56685 None:intergenic 35.0%
ACGTATGGATAGAAGGAATA+GGG - tig0016544:56700-56719 None:intergenic 35.0%
TACGTATGGATAGAAGGAAT+AGG - tig0016544:56701-56720 None:intergenic 35.0%
TTGAGATACGTATGGATAGA+AGG - tig0016544:56707-56726 None:intergenic 35.0%
GAACCATTAAATTCGGAAAG+GGG - tig0016544:56743-56762 None:intergenic 35.0%
GATGTCTGCAAATGACAATT+AGG - tig0016544:56810-56829 None:intergenic 35.0%
! AGATGATCCAATAATGGAGA+GGG - tig0016544:56944-56963 None:intergenic 35.0%
! AAGATGATCCAATAATGGAG+AGG - tig0016544:56945-56964 None:intergenic 35.0%
CTCCATTATTGGATCATCTT+CGG + tig0016544:56945-56964 Msa1358890:CDS 35.0%
! AAAGTCTTTGTTTGCATCAC+AGG - tig0016544:56983-57002 None:intergenic 35.0%
GAAAATGAGCTAGAAGTTCT+TGG + tig0016544:57353-57372 Msa1358890:CDS 35.0%
AACTTGGTTGCTTGGATATT+TGG - tig0016544:57678-57697 None:intergenic 35.0%
AATCAATTGCTGCAGTAACT+TGG - tig0016544:57694-57713 None:intergenic 35.0%
GCAAGAAGTTGAAACAGAAT+GGG - tig0016544:57901-57920 None:intergenic 35.0%
AGCAAGAAGTTGAAACAGAA+TGG - tig0016544:57902-57921 None:intergenic 35.0%
! TTTCAACTTCTTGCTGTACT+GGG + tig0016544:57907-57926 Msa1358890:CDS 35.0%
CTAAGCTCATATAGCAATGA+CGG - tig0016544:58069-58088 None:intergenic 35.0%
! CGAATCGTAAGCATTTTAGA+TGG - tig0016544:58257-58276 None:intergenic 35.0%
! TAATGAACATGCTTTTCGCT+AGG - tig0016544:58280-58299 None:intergenic 35.0%
! GATTGCACATTTTCTCGGAT+TGG - tig0016544:47329-47348 None:intergenic 40.0%
! TGCTAGAATGCCATTTCCTA+GGG + tig0016544:47483-47502 Msa1358890:intron 40.0%
CATGTACAAACCCTAGGAAA+TGG - tig0016544:47496-47515 None:intergenic 40.0%
AGACTAGACAGGATAGGATT+AGG + tig0016544:48244-48263 Msa1358890:intron 40.0%
TCTTCTTACAACGGCATCTA+CGG - tig0016544:48364-48383 None:intergenic 40.0%
AGTCAGGTTAAAAGAGGTAG+AGG + tig0016544:48402-48421 Msa1358890:intron 40.0%
GCTACGATAATATCTGTCTC+TGG + tig0016544:48703-48722 Msa1358890:intron 40.0%
CGATAATATCTGTCTCTGGT+TGG + tig0016544:48707-48726 Msa1358890:intron 40.0%
!!! TCTGGTTGGTTTTTCTCTCT+TGG + tig0016544:48721-48740 Msa1358890:intron 40.0%
!!! CTGGTTGGTTTTTCTCTCTT+GGG + tig0016544:48722-48741 Msa1358890:intron 40.0%
!!! TGGTTGGTTTTTCTCTCTTG+GGG + tig0016544:48723-48742 Msa1358890:intron 40.0%
GGGATTTCCTTAACTGCTTA+TGG + tig0016544:48743-48762 Msa1358890:intron 40.0%
TTACTACGATGTAAGGGGTT+TGG + tig0016544:48835-48854 Msa1358890:CDS 40.0%
CTTGAGATGTATCCATTCCT+TGG - tig0016544:48863-48882 None:intergenic 40.0%
GGAGTTCTGTTTGTCTTCTT+TGG + tig0016544:49036-49055 Msa1358890:intron 40.0%
TTGATTTACTGAGCTTCAGC+TGG + tig0016544:49191-49210 Msa1358890:intron 40.0%
TTCCATACAAACATCCTGCA+AGG + tig0016544:49330-49349 Msa1358890:CDS 40.0%
TCCATACAAACATCCTGCAA+GGG + tig0016544:49331-49350 Msa1358890:CDS 40.0%
!! TCTTTTGTTGTAACCCTTGC+AGG - tig0016544:49347-49366 None:intergenic 40.0%
TGGGGACCAAAACAATATGA+AGG + tig0016544:49389-49408 Msa1358890:CDS 40.0%
GGGGACCAAAACAATATGAA+GGG + tig0016544:49390-49409 Msa1358890:CDS 40.0%
AGAAGAACACCTGATTGAGT+GGG + tig0016544:49443-49462 Msa1358890:CDS 40.0%
AAAAGCCATGGTGTAAAGAC+AGG + tig0016544:49468-49487 Msa1358890:CDS 40.0%
GCAGGGAAAGATCTAAAAGT+TGG + tig0016544:49660-49679 Msa1358890:CDS 40.0%
CGTGTCCATTATCATTTCTG+AGG + tig0016544:49704-49723 Msa1358890:CDS 40.0%
GCTTGTGCTTGAAACTGATA+TGG + tig0016544:49728-49747 Msa1358890:CDS 40.0%
AATGTCCATCCTTACCGAAT+AGG + tig0016544:49900-49919 Msa1358890:intron 40.0%
AAAGAGTGGTTGCTCCTATT+CGG - tig0016544:49917-49936 None:intergenic 40.0%
AGCAACCACTCTTTCTTTGT+TGG + tig0016544:49923-49942 Msa1358890:intron 40.0%
GCAACCACTCTTTCTTTGTT+GGG + tig0016544:49924-49943 Msa1358890:intron 40.0%
TCAGTATCGTCTCTTGAAAG+AGG + tig0016544:50323-50342 Msa1358890:intron 40.0%
CAAACCTAAGTTCGATTCCT+GGG - tig0016544:50703-50722 None:intergenic 40.0%
ACAAACCTAAGTTCGATTCC+TGG - tig0016544:50704-50723 None:intergenic 40.0%
ATCGAACTTAGGTTTGTCCT+TGG + tig0016544:50707-50726 Msa1358890:intron 40.0%
ATGAAGCACAACCAAGCAAT+TGG - tig0016544:50756-50775 None:intergenic 40.0%
ATTGCTTGGTTGTGCTTCAT+AGG + tig0016544:50756-50775 Msa1358890:intron 40.0%
TTGCTTGGTTGTGCTTCATA+GGG + tig0016544:50757-50776 Msa1358890:intron 40.0%
CTGTTTCGTCATCAACCATA+TGG + tig0016544:50916-50935 Msa1358890:intron 40.0%
AAAGAGACACCGAGTCATAA+AGG - tig0016544:50974-50993 None:intergenic 40.0%
AAAGTAACAGGCCTAGAGTA+GGG - tig0016544:51042-51061 None:intergenic 40.0%
AAAAGTAACAGGCCTAGAGT+AGG - tig0016544:51043-51062 None:intergenic 40.0%
TAGAAAGCAGTGGGAATCAT+AGG + tig0016544:51114-51133 Msa1358890:intron 40.0%
CGTTTCTACCTTCTTTCTAG+TGG + tig0016544:51311-51330 Msa1358890:intron 40.0%
TGGACCTCCTAAAATTGATC+TGG + tig0016544:51367-51386 Msa1358890:intron 40.0%
TTGATCTGGTTGTTATGTGC+CGG + tig0016544:51381-51400 Msa1358890:intron 40.0%
AGTGTCAGTGACCAAGTTAT+AGG - tig0016544:51572-51591 None:intergenic 40.0%
ATCCCATAACTTAGCTGTGT+TGG + tig0016544:51597-51616 Msa1358890:intron 40.0%
GTTCCAACACAGCTAAGTTA+TGG - tig0016544:51603-51622 None:intergenic 40.0%
TAACTTAGCTGTGTTGGAAC+TGG + tig0016544:51603-51622 Msa1358890:intron 40.0%
CTGGAAGAGAACTAATAGCT+AGG + tig0016544:51622-51641 Msa1358890:intron 40.0%
TGTAGGGAAGTTATTGTGAG+AGG + tig0016544:51717-51736 Msa1358890:intron 40.0%
TACTGTTAAGCATGAGGAAG+TGG + tig0016544:51896-51915 Msa1358890:intron 40.0%
GGTTGAGGGATATCATTCTT+GGG + tig0016544:51952-51971 Msa1358890:intron 40.0%
CATGTGTAGTGAAACAAGCA+AGG - tig0016544:52020-52039 None:intergenic 40.0%
TCTTTCAATCCTAAGGGATC+AGG + tig0016544:52188-52207 Msa1358890:intron 40.0%
TTAAGTGCCAGTGTATGATG+AGG + tig0016544:52326-52345 Msa1358890:intron 40.0%
ATCTCAACCTCATCATACAC+TGG - tig0016544:52336-52355 None:intergenic 40.0%
TCAAACAATCAGATCTCTCC+AGG - tig0016544:52397-52416 None:intergenic 40.0%
CTTCTTAACAAGTGGACAAG+TGG - tig0016544:52470-52489 None:intergenic 40.0%
TTAACTAGGTACCTAGGCTA+AGG + tig0016544:52779-52798 Msa1358890:intron 40.0%
GAAGCGATTACAATGCTAGA+TGG + tig0016544:52925-52944 Msa1358890:CDS 40.0%
AAGACAGGTAAATTATGCCC+AGG + tig0016544:52978-52997 Msa1358890:intron 40.0%
CTATTCATTTCAATCTCCCC+GGG - tig0016544:53141-53160 None:intergenic 40.0%
ACACTTTCCTTACTAGAGAG+AGG + tig0016544:53711-53730 Msa1358890:intron 40.0%
GACTAAGGGAAAGCAAAAAC+TGG + tig0016544:53932-53951 Msa1358890:intron 40.0%
GACAGAGAGATAACCATGTT+AGG - tig0016544:54142-54161 None:intergenic 40.0%
!! ATCACCCTTGCTATCAGTTT+TGG + tig0016544:54234-54253 Msa1358890:intron 40.0%
!! TCACCCTTGCTATCAGTTTT+GGG + tig0016544:54235-54254 Msa1358890:intron 40.0%
AGACCCAAAACTGATAGCAA+GGG - tig0016544:54241-54260 None:intergenic 40.0%
TTTAGACTTCACCCAAGGAA+AGG + tig0016544:54425-54444 Msa1358890:intron 40.0%
TTAGACTTCACCCAAGGAAA+GGG + tig0016544:54426-54445 Msa1358890:intron 40.0%
AATCACATTCCCCTTTCCTT+GGG - tig0016544:54439-54458 None:intergenic 40.0%
AAATCACATTCCCCTTTCCT+TGG - tig0016544:54440-54459 None:intergenic 40.0%
ATTGCAGGCAGTAGTAAAAC+TGG + tig0016544:54644-54663 Msa1358890:intron 40.0%
AACTGGTGTTTAGAAGAAGC+AGG + tig0016544:54661-54680 Msa1358890:intron 40.0%
! AGCGTCGAGCAAAAGAATTA+GGG + tig0016544:54712-54731 Msa1358890:intron 40.0%
CAGCAATGGAGAAAGTCAAA+AGG + tig0016544:54736-54755 Msa1358890:intron 40.0%
AAGTCAAAAGGATTACCGTC+TGG + tig0016544:54748-54767 Msa1358890:intron 40.0%
AACCAAAAGGAGAAACCAGA+CGG - tig0016544:54766-54785 None:intergenic 40.0%
!!! CTGGTTTCTCCTTTTGGTTT+TGG + tig0016544:54767-54786 Msa1358890:intron 40.0%
AAGTAAGCAACACAGGTGTT+GGG + tig0016544:55360-55379 Msa1358890:intron 40.0%
ATGTTTGATCATCTGCCATG+TGG + tig0016544:55493-55512 Msa1358890:intron 40.0%
TTGGAGCTTACTCAAATCCT+TGG + tig0016544:55555-55574 Msa1358890:intron 40.0%
GTGGAAATGTTAGAACTCCA+AGG - tig0016544:55575-55594 None:intergenic 40.0%
CTAAACCCATTCATGGAACT+CGG + tig0016544:55633-55652 Msa1358890:intron 40.0%
TTCCTCCAGAGATTTACACT+TGG + tig0016544:55864-55883 Msa1358890:CDS 40.0%
TCCTCCAGAGATTTACACTT+GGG + tig0016544:55865-55884 Msa1358890:CDS 40.0%
TTCTCCCAAGTGTAAATCTC+TGG - tig0016544:55872-55891 None:intergenic 40.0%
ACATGTTTGATACCTCTTGC+TGG + tig0016544:55962-55981 Msa1358890:CDS 40.0%
TGATTAAGAAAGCCAGCAAG+AGG - tig0016544:55977-55996 None:intergenic 40.0%
ACATTCAAAACCAATGACGG+AGG - tig0016544:56059-56078 None:intergenic 40.0%
TGCCCACATATTACACACTA+TGG + tig0016544:56498-56517 Msa1358890:CDS 40.0%
! GAAGAATGCTGCTTAAGCTA+TGG + tig0016544:56582-56601 Msa1358890:CDS 40.0%
CCGTATGATGTCATTCCTTT+AGG + tig0016544:56663-56682 Msa1358890:CDS 40.0%
ACACCCCTTTCCGAATTTAA+TGG + tig0016544:56737-56756 Msa1358890:intron 40.0%
!! TTGTTGTAAGTTTGCTGAGC+TGG + tig0016544:56764-56783 Msa1358890:intron 40.0%
AGGATAAACCTGTGTCCAAA+TGG + tig0016544:56855-56874 Msa1358890:CDS 40.0%
CTCCGAAGATGATCCAATAA+TGG - tig0016544:56950-56969 None:intergenic 40.0%
! ATTTTTCGTCCACAGTTGCA+AGG + tig0016544:57323-57342 Msa1358890:intron 40.0%
AGACATCTTTGACGACATGA+TGG + tig0016544:57385-57404 Msa1358890:CDS 40.0%
! GTGAAGTCGATCTTGATAAC+AGG + tig0016544:57417-57436 Msa1358890:CDS 40.0%
! TCGATCTTGATAACAGGTGA+AGG + tig0016544:57423-57442 Msa1358890:intron 40.0%
TTGGTTGCTTGGATATTTGG+TGG - tig0016544:57675-57694 None:intergenic 40.0%
TACCGAAACAGGCTATTAGT+TGG + tig0016544:57755-57774 Msa1358890:intron 40.0%
GACCAACTAATAGCCTGTTT+CGG - tig0016544:57760-57779 None:intergenic 40.0%
CTACACCTGGGATGAAAAAT+TGG + tig0016544:57842-57861 Msa1358890:CDS 40.0%
! GTTTCAACTTCTTGCTGTAC+TGG + tig0016544:57906-57925 Msa1358890:CDS 40.0%
GAATGAACTGCACAAGTGTT+TGG + tig0016544:57944-57963 Msa1358890:CDS 40.0%
TCCACGCGGTAGATTTAATT+TGG + tig0016544:57991-58010 Msa1358890:three_prime_UTR 40.0%
TCCAAATTAAATCTACCGCG+TGG - tig0016544:57995-58014 None:intergenic 40.0%
! AGCAAGCAACTGTTTCTTAC+CGG - tig0016544:58176-58195 None:intergenic 40.0%
!! TTCTAGAACCTACCGTGTTC+TGG + tig0016544:47239-47258 Msa1358890:five_prime_UTR 45.0%
!! AGAAAGTACCAGAACACGGT+AGG - tig0016544:47250-47269 None:intergenic 45.0%
!!! GCACATTTTCTCGGATTGGT+TGG - tig0016544:47325-47344 None:intergenic 45.0%
! GTGCTAGAATGCCATTTCCT+AGG + tig0016544:47482-47501 Msa1358890:intron 45.0%
GTTGAATGCAATTGCAGCCA+TGG + tig0016544:47841-47860 Msa1358890:intron 45.0%
ACCGGCAATGTTGTATGGTA+CGG + tig0016544:48143-48162 Msa1358890:intron 45.0%
TCCGTACCATACAACATTGC+CGG - tig0016544:48147-48166 None:intergenic 45.0%
TGTTGTATGGTACGGAGTGT+TGG + tig0016544:48151-48170 Msa1358890:intron 45.0%
! GTTGTATGGTACGGAGTGTT+GGG + tig0016544:48152-48171 Msa1358890:intron 45.0%
CGCTTACTTTACTCTCGTGT+TGG - tig0016544:48188-48207 None:intergenic 45.0%
CGAGAGTAAAGTAAGCGTAG+CGG + tig0016544:48191-48210 Msa1358890:intron 45.0%
GATGAGTGGTAAGACTAGAC+AGG + tig0016544:48233-48252 Msa1358890:intron 45.0%
GTGGTAAGACTAGACAGGAT+AGG + tig0016544:48238-48257 Msa1358890:intron 45.0%
TGACACCATTAGAGAGAGAG+TGG + tig0016544:48269-48288 Msa1358890:intron 45.0%
GACACCATTAGAGAGAGAGT+GGG + tig0016544:48270-48289 Msa1358890:intron 45.0%
ACACCATTAGAGAGAGAGTG+GGG + tig0016544:48271-48290 Msa1358890:intron 45.0%
CTTCTTACAACGGCATCTAC+GGG - tig0016544:48363-48382 None:intergenic 45.0%
AGATCAAATGGAGGAGAGTC+AGG + tig0016544:48386-48405 Msa1358890:intron 45.0%
GAGGAGAGTCAGGTTAAAAG+AGG + tig0016544:48396-48415 Msa1358890:intron 45.0%
! AAGCCTTATCCCACTAAGTG+GGG - tig0016544:48542-48561 None:intergenic 45.0%
! CAAGCCTTATCCCACTAAGT+GGG - tig0016544:48543-48562 None:intergenic 45.0%
AACTACGCCAGCGTTATTCA+AGG + tig0016544:48657-48676 Msa1358890:intron 45.0%
ATACATCTCAAGTGCTCCTC+AGG + tig0016544:48871-48890 Msa1358890:CDS 45.0%
ATTCATCCAAGAAGGTCCTG+AGG - tig0016544:48890-48909 None:intergenic 45.0%
ACTGCACTCTCTCTCTTGTT+TGG + tig0016544:49145-49164 Msa1358890:intron 45.0%
! CTGCACTCTCTCTCTTGTTT+GGG + tig0016544:49146-49165 Msa1358890:intron 45.0%
! TTTTGCTGAAGACGATGCCT+CGG + tig0016544:49221-49240 Msa1358890:CDS 45.0%
ACCCTTGCAGGATGTTTGTA+TGG - tig0016544:49335-49354 None:intergenic 45.0%
GAGAAGAACACCTGATTGAG+TGG + tig0016544:49442-49461 Msa1358890:CDS 45.0%
GAAGAACACCTGATTGAGTG+GGG + tig0016544:49444-49463 Msa1358890:CDS 45.0%
ATTGAGTGGGGTAAAAGCCA+TGG + tig0016544:49456-49475 Msa1358890:CDS 45.0%
TACACAGATGTTGAAGGAGC+AGG + tig0016544:49624-49643 Msa1358890:intron 45.0%
TTGCTCCTATTCGGTAAGGA+TGG - tig0016544:49908-49927 None:intergenic 45.0%
AGGTCCCAACAAAGAAAGAG+TGG - tig0016544:49931-49950 None:intergenic 45.0%
TTGTTGGGACCTATGAAGCA+CGG + tig0016544:49939-49958 Msa1358890:intron 45.0%
CGTCTCTTGAAAGAGGTTGA+TGG + tig0016544:50330-50349 Msa1358890:CDS 45.0%
TTCCTGGGTGGAACAATTCT+TGG - tig0016544:50688-50707 None:intergenic 45.0%
GAACTTAGGTTTGTCCTTGG+TGG + tig0016544:50710-50729 Msa1358890:intron 45.0%
ACCACTTGAAGCCAATTGCT+TGG + tig0016544:50742-50761 Msa1358890:intron 45.0%
! ACCAAGCAATTGGCTTCAAG+TGG - tig0016544:50746-50765 None:intergenic 45.0%
AAGTAACAGGCCTAGAGTAG+GGG - tig0016544:51041-51060 None:intergenic 45.0%
! GCTTTCTAGAGAGGGAAAGT+CGG - tig0016544:51102-51121 None:intergenic 45.0%
! TTTCCCTCTCTAGAAAGCAG+TGG + tig0016544:51104-51123 Msa1358890:intron 45.0%
! TTCCCTCTCTAGAAAGCAGT+GGG + tig0016544:51105-51124 Msa1358890:intron 45.0%
! TTCCCACTGCTTTCTAGAGA+GGG - tig0016544:51110-51129 None:intergenic 45.0%
! ATTCCCACTGCTTTCTAGAG+AGG - tig0016544:51111-51130 None:intergenic 45.0%
! TTTTCCCTTACACACCAGAG+TGG + tig0016544:51865-51884 Msa1358890:intron 45.0%
CATACCACTCTGGTGTGTAA+GGG - tig0016544:51872-51891 None:intergenic 45.0%
! TGGCTCTACTGTTAAGCATG+AGG + tig0016544:51890-51909 Msa1358890:intron 45.0%
CGGTTGAGGGATATCATTCT+TGG + tig0016544:51951-51970 Msa1358890:intron 45.0%
TGCTTGCTTCCTGATATAGG+AGG + tig0016544:51979-51998 Msa1358890:intron 45.0%
TGTCACAAGCCTCCTATATC+AGG - tig0016544:51991-52010 None:intergenic 45.0%
GGGGTTGTGGTTGTTTGATA+AGG + tig0016544:52229-52248 Msa1358890:intron 45.0%
GCAAGGTTAACTAGGTACCT+AGG + tig0016544:52773-52792 Msa1358890:intron 45.0%
AATTCGTAGTTATCAGGGGC+AGG - tig0016544:53375-53394 None:intergenic 45.0%
AGCAAAAAGAGTCAAGCAGC+AGG - tig0016544:53466-53485 None:intergenic 45.0%
AATGCTCCTCAACACGACTA+AGG + tig0016544:53917-53936 Msa1358890:intron 45.0%
ATGCTCCTCAACACGACTAA+GGG + tig0016544:53918-53937 Msa1358890:intron 45.0%
TAGCTCTTCTAACTAAGCCG+TGG - tig0016544:54106-54125 None:intergenic 45.0%
CAGACCCAAAACTGATAGCA+AGG - tig0016544:54242-54261 None:intergenic 45.0%
AGATAAAAGCTTCGTCGGAG+AGG + tig0016544:54348-54367 Msa1358890:intron 45.0%
TAGACTTCACCCAAGGAAAG+GGG + tig0016544:54427-54446 Msa1358890:intron 45.0%
!! GAGCGTCGAGCAAAAGAATT+AGG + tig0016544:54711-54730 Msa1358890:intron 45.0%
!! TACCGTCTGGTTTCTCCTTT+TGG + tig0016544:54761-54780 Msa1358890:intron 45.0%
! AATCCATATCAGGCTCTAGC+CGG - tig0016544:54819-54838 None:intergenic 45.0%
ATGGTATGTGATGCCAGTGA+TGG + tig0016544:55293-55312 Msa1358890:intron 45.0%
TGCTTACTTCTCCCACACAT+AGG - tig0016544:55349-55368 None:intergenic 45.0%
GAAGTAAGCAACACAGGTGT+TGG + tig0016544:55359-55378 Msa1358890:intron 45.0%
TTGATCATCTGCCATGTGGA+TGG + tig0016544:55497-55516 Msa1358890:intron 45.0%
TGTACTTCTCTCCATCCACA+TGG - tig0016544:55511-55530 None:intergenic 45.0%
GTACAGTACCTTCCTCTAGT+AGG + tig0016544:55526-55545 Msa1358890:intron 45.0%
TTGGACCGAGTTCCATGAAT+GGG - tig0016544:55641-55660 None:intergenic 45.0%
TTTGGACCGAGTTCCATGAA+TGG - tig0016544:55642-55661 None:intergenic 45.0%
GCATGCTCAGTATGATGAGT+TGG + tig0016544:55808-55827 Msa1358890:CDS 45.0%
TTGGTTCCTGCTTTGTGCAA+TGG + tig0016544:55827-55846 Msa1358890:CDS 45.0%
GGAAAACCATTGCACAAAGC+AGG - tig0016544:55836-55855 None:intergenic 45.0%
TCCCAAGTGTAAATCTCTGG+AGG - tig0016544:55869-55888 None:intergenic 45.0%
TTCTCTTCTTCCTCCGTCAT+TGG + tig0016544:56046-56065 Msa1358890:intron 45.0%
TTACTTGCTTGCGAATTGCC+TGG + tig0016544:56344-56363 Msa1358890:intron 45.0%
TTGAGGTCTCAAACATTGCC+AGG - tig0016544:56434-56453 None:intergenic 45.0%
AGCAGCATTCTTCTCCAGAT+CGG - tig0016544:56575-56594 None:intergenic 45.0%
TGGTCTTCCCTCTCCATTAT+TGG + tig0016544:56934-56953 Msa1358890:CDS 45.0%
TCCACAGTTGCAAGGAAACT+TGG + tig0016544:57331-57350 Msa1358890:intron 45.0%
TCCAAGTTTCCTTGCAACTG+TGG - tig0016544:57335-57354 None:intergenic 45.0%
!! TGACGACATGATGGACAGTA+TGG + tig0016544:57394-57413 Msa1358890:CDS 45.0%
!! GACGACATGATGGACAGTAT+GGG + tig0016544:57395-57414 Msa1358890:CDS 45.0%
CGTTTAGCTGTTACCGAAAC+AGG + tig0016544:57744-57763 Msa1358890:intron 45.0%
TTCTCAGAGAAAGCTACACC+TGG + tig0016544:57829-57848 Msa1358890:intron 45.0%
TCTCAGAGAAAGCTACACCT+GGG + tig0016544:57830-57849 Msa1358890:intron 45.0%
! CACAGCCAATTTTTCATCCC+AGG - tig0016544:57850-57869 None:intergenic 45.0%
CTGGGATGAAAAATTGGCTG+TGG + tig0016544:57848-57867 Msa1358890:CDS 45.0%
TGTTTGGCTGAGGACATTGT+AGG + tig0016544:57960-57979 Msa1358890:CDS 45.0%
TGTAGGTTAATCGATCCACG+CGG + tig0016544:57977-57996 Msa1358890:exon 45.0%
CTAAGCTTCGCTGTACCATA+TGG - tig0016544:58101-58120 None:intergenic 45.0%
! CAAGCAACTGTTTCTTACCG+GGG - tig0016544:58174-58193 None:intergenic 45.0%
! GCAAGCAACTGTTTCTTACC+GGG - tig0016544:58175-58194 None:intergenic 45.0%
!!! ATTTTGAATTATTATATTTA+TGG + tig0016544:47771-47790 Msa1358890:intron 5.0%
!! TAGAAAAAAAAAAAAATTTA+AGG - tig0016544:54062-54081 None:intergenic 5.0%
!!! AAATTTTTTTTTTTTTCTAT+TGG + tig0016544:54063-54082 Msa1358890:intron 5.0%
!! TATTATAATATTATTACTAT+AGG + tig0016544:54617-54636 Msa1358890:intron 5.0%
CTATCGGACAACAGTCAGAC+CGG + tig0016544:48125-48144 Msa1358890:intron 50.0%
GTCAGACCGGCAATGTTGTA+TGG + tig0016544:48138-48157 Msa1358890:intron 50.0%
! AAGTAAGCGTAGCGGAGATG+AGG + tig0016544:48199-48218 Msa1358890:intron 50.0%
AGGATGTTGCGTTGGATGAG+TGG + tig0016544:48219-48238 Msa1358890:intron 50.0%
CACCATTAGAGAGAGAGTGG+GGG + tig0016544:48272-48291 Msa1358890:intron 50.0%
TACCCCCACTCTCTCTCTAA+TGG - tig0016544:48277-48296 None:intergenic 50.0%
CTTATCCCACTAAGTGGGGT+CGG - tig0016544:48538-48557 None:intergenic 50.0%
! CCAAGCCTTATCCCACTAAG+TGG - tig0016544:48544-48563 None:intergenic 50.0%
CCACTTAGTGGGATAAGGCT+TGG + tig0016544:48541-48560 Msa1358890:intron 50.0%
! ATGTAAGGGGTTTGGTCCCA+AGG + tig0016544:48843-48862 Msa1358890:CDS 50.0%
TTACAGCCCCAGGAATGAGT+TGG + tig0016544:49251-49270 Msa1358890:CDS 50.0%
AGAGCCTCCAACTCATTCCT+GGG - tig0016544:49261-49280 None:intergenic 50.0%
! GGCTTTTACCCCACTCAATC+AGG - tig0016544:49455-49474 None:intergenic 50.0%
CTTTCCCTGCTATCATTCCC+CGG - tig0016544:49650-49669 None:intergenic 50.0%
GTGGTTGCTCCTATTCGGTA+AGG - tig0016544:49912-49931 None:intergenic 50.0%
!! TATTATCGGTGTCGGCGTGT+GGG - tig0016544:49997-50016 None:intergenic 50.0%
!! TTATTATCGGTGTCGGCGTG+TGG - tig0016544:49998-50017 None:intergenic 50.0%
! TATAGGTGTCGTGTCGGTGT+CGG + tig0016544:50044-50063 Msa1358890:intron 50.0%
! TCCTTGGATTAGGTGTGTCC+CGG - tig0016544:50090-50109 None:intergenic 50.0%
TATGAAGCACGGACACTCCT+TGG - tig0016544:50106-50125 None:intergenic 50.0%
!! AAGGAGTGTCCGTGCTTCAT+AGG + tig0016544:50105-50124 Msa1358890:intron 50.0%
AGTGTCCGTGCTTCATAGGT+TGG + tig0016544:50109-50128 Msa1358890:intron 50.0%
GTGTCCGTGCTTCATAGGTT+GGG + tig0016544:50110-50129 Msa1358890:intron 50.0%
TCGTCCCAACCTATGAAGCA+CGG - tig0016544:50117-50136 None:intergenic 50.0%
TGTTATCCCTCCGGTTCTCA+GGG + tig0016544:50612-50631 Msa1358890:intron 50.0%
CTGGTAATCCGTAGTTTGGC+CGG + tig0016544:50644-50663 Msa1358890:intron 50.0%
TGGTAATCCGTAGTTTGGCC+GGG + tig0016544:50645-50664 Msa1358890:intron 50.0%
GACAGGCTTTACTTACCTCC+CGG - tig0016544:50666-50685 None:intergenic 50.0%
GGGTGGAACAATTCTTGGAC+AGG - tig0016544:50683-50702 None:intergenic 50.0%
GTCCAAGAATTGTTCCACCC+AGG + tig0016544:50683-50702 Msa1358890:intron 50.0%
TCCACCCAGGAATCGAACTT+AGG + tig0016544:50696-50715 Msa1358890:intron 50.0%
ACCTAAGTTCGATTCCTGGG+TGG - tig0016544:50700-50719 None:intergenic 50.0%
GTGGTTAATGAGCTCCACCA+AGG - tig0016544:50727-50746 None:intergenic 50.0%
AGTAACAGGCCTAGAGTAGG+GGG - tig0016544:51040-51059 None:intergenic 50.0%
! GTTGTTATGTGCCGGCATAG+AGG + tig0016544:51389-51408 Msa1358890:intron 50.0%
CCATACCACTCTGGTGTGTA+AGG - tig0016544:51873-51892 None:intergenic 50.0%
CCTTACACACCAGAGTGGTA+TGG + tig0016544:51870-51889 Msa1358890:intron 50.0%
ACAGTAGAGCCATACCACTC+TGG - tig0016544:51882-51901 None:intergenic 50.0%
GTGGCAATGTGTAAGGAACC+CGG + tig0016544:53120-53139 Msa1358890:intron 50.0%
TGGCAATGTGTAAGGAACCC+GGG + tig0016544:53121-53140 Msa1358890:intron 50.0%
!! TGTTGAGGAGCATTTCCCTG+GGG - tig0016544:53911-53930 None:intergenic 50.0%
!! GTGTTGAGGAGCATTTCCCT+GGG - tig0016544:53912-53931 None:intergenic 50.0%
GCTTTCCCTTAGTCGTGTTG+AGG - tig0016544:53926-53945 None:intergenic 50.0%
GCACGGGTAGAGGGTAAAAT+GGG - tig0016544:54033-54052 None:intergenic 50.0%
TCTAACTAAGCCGTGGACCT+CGG - tig0016544:54099-54118 None:intergenic 50.0%
CCATGTTAGGCGCGAGATAT+AGG - tig0016544:54129-54148 None:intergenic 50.0%
CCTATATCTCGCGCCTAACA+TGG + tig0016544:54126-54145 Msa1358890:intron 50.0%
! CTTTTGCTCGACGCTCGATT+GGG - tig0016544:54707-54726 None:intergenic 50.0%
! TCTTTTGCTCGACGCTCGAT+TGG - tig0016544:54708-54727 None:intergenic 50.0%
TATCCGGCTAGAGCCTGATA+TGG + tig0016544:54813-54832 Msa1358890:intron 50.0%
GGCTAGAGCCTGATATGGAT+TGG + tig0016544:54818-54837 Msa1358890:intron 50.0%
ACACTATAGGTCTGTCCTCG+TGG - tig0016544:55226-55245 None:intergenic 50.0%
ACGAGGACAGACCTATAGTG+TGG + tig0016544:55225-55244 Msa1358890:intron 50.0%
GTGGGAGAAGTAAGCAACAC+AGG + tig0016544:55353-55372 Msa1358890:intron 50.0%
!! AGCAACACAGGTGTTGGGTT+TGG + tig0016544:55365-55384 Msa1358890:intron 50.0%
CATTAAATGCAGGAAGGGGC+TGG - tig0016544:55744-55763 None:intergenic 50.0%
CTATCAAGACCATGCCGATC+TGG + tig0016544:56558-56577 Msa1358890:CDS 50.0%
CATTCTTCTCCAGATCGGCA+TGG - tig0016544:56570-56589 None:intergenic 50.0%
! TCATACGGGTTGTCTCCTTG+AGG - tig0016544:56651-56670 None:intergenic 50.0%
TGAGTCGTCCATTTGGACAC+AGG - tig0016544:56866-56885 None:intergenic 50.0%
GTCCAAATGGACGACTCACA+TGG + tig0016544:56868-56887 Msa1358890:CDS 50.0%
CACCATGTGAGTCGTCCATT+TGG - tig0016544:56873-56892 None:intergenic 50.0%
GCTGCAGTAACTTGGTTGCT+TGG - tig0016544:57686-57705 None:intergenic 50.0%
ACTGCACAAGTGTTTGGCTG+AGG + tig0016544:57950-57969 Msa1358890:CDS 50.0%
TTCGCTGTACCATATGGTCG+AGG - tig0016544:58095-58114 None:intergenic 50.0%
TGCAGCCATGGATAGTGACG+AGG + tig0016544:47853-47872 Msa1358890:intron 55.0%
GCACTCCTCGTCACTATCCA+TGG - tig0016544:47861-47880 None:intergenic 55.0%
!! GTATGGTACGGAGTGTTGGG+CGG + tig0016544:48155-48174 Msa1358890:intron 55.0%
CGGAGATGAGGATGTTGCGT+TGG + tig0016544:48211-48230 Msa1358890:intron 55.0%
ACTAAGTGGGGTCGGCTACA+TGG - tig0016544:48530-48549 None:intergenic 55.0%
ATGTAGCCGACCCCACTTAG+TGG + tig0016544:48529-48548 Msa1358890:intron 55.0%
TGTAGCCGACCCCACTTAGT+GGG + tig0016544:48530-48549 Msa1358890:intron 55.0%
CGACCCCACTTAGTGGGATA+AGG + tig0016544:48536-48555 Msa1358890:intron 55.0%
! AGGGGTTTGGTCCCAAGGAA+TGG + tig0016544:48848-48867 Msa1358890:CDS 55.0%
AGTGCTCCTCAGGACCTTCT+TGG + tig0016544:48881-48900 Msa1358890:CDS 55.0%
GAGCCTCCAACTCATTCCTG+GGG - tig0016544:49260-49279 None:intergenic 55.0%
GAGAGCCTCCAACTCATTCC+TGG - tig0016544:49262-49281 None:intergenic 55.0%
CAGATGTTGAAGGAGCAGGC+CGG + tig0016544:49628-49647 Msa1358890:intron 55.0%
AGATGTTGAAGGAGCAGGCC+GGG + tig0016544:49629-49648 Msa1358890:intron 55.0%
GTGTCGTGTCCGTGCTTCAT+AGG - tig0016544:49951-49970 None:intergenic 55.0%
CACTGATGCGTATCCGACAC+CGG + tig0016544:50068-50087 Msa1358890:intron 55.0%
ACTGATGCGTATCCGACACC+GGG + tig0016544:50069-50088 Msa1358890:intron 55.0%
GATTAGGTGTGTCCCGGTGT+CGG - tig0016544:50084-50103 None:intergenic 55.0%
ACCGGGACACACCTAATCCA+AGG + tig0016544:50086-50105 Msa1358890:intron 55.0%
GCACGGACACTCCTTGGATT+AGG - tig0016544:50100-50119 None:intergenic 55.0%
GTGTTATCCCTCCGGTTCTC+AGG + tig0016544:50611-50630 Msa1358890:intron 55.0%
GTTATCCCTCCGGTTCTCAG+GGG + tig0016544:50613-50632 Msa1358890:intron 55.0%
! CTTTTCCCCTGAGAACCGGA+GGG - tig0016544:50621-50640 None:intergenic 55.0%
CTCCGGTTCTCAGGGGAAAA+GGG + tig0016544:50620-50639 Msa1358890:intron 55.0%
GGGCCTGGTAATCCGTAGTT+TGG + tig0016544:50640-50659 Msa1358890:intron 55.0%
! CGGCCAAACTACGGATTACC+AGG - tig0016544:50646-50665 None:intergenic 55.0%
TAATCCGTAGTTTGGCCGGG+AGG + tig0016544:50648-50667 Msa1358890:intron 55.0%
CTTACCTCCCGGCCAAACTA+CGG - tig0016544:50655-50674 None:intergenic 55.0%
TAACAGGCCTAGAGTAGGGG+GGG - tig0016544:51038-51057 None:intergenic 55.0%
GTAACAGGCCTAGAGTAGGG+GGG - tig0016544:51039-51058 None:intergenic 55.0%
GGCAATGTGTAAGGAACCCG+GGG + tig0016544:53122-53141 Msa1358890:intron 55.0%
GGGCAGGTGTACGTTGTGTT+AGG - tig0016544:53359-53378 None:intergenic 55.0%
CATTTCCCTGGGGAGTTGTG+GGG - tig0016544:53901-53920 None:intergenic 55.0%
GCATTTCCCTGGGGAGTTGT+GGG - tig0016544:53902-53921 None:intergenic 55.0%
AGCATTTCCCTGGGGAGTTG+TGG - tig0016544:53903-53922 None:intergenic 55.0%
!! CGTGTTGAGGAGCATTTCCC+TGG - tig0016544:53913-53932 None:intergenic 55.0%
CGGGTAGAGGGTAAAATGGG+AGG - tig0016544:54030-54049 None:intergenic 55.0%
GGCACGGGTAGAGGGTAAAA+TGG - tig0016544:54034-54053 None:intergenic 55.0%
! AGGAAAAGGGCACGGGTAGA+GGG - tig0016544:54042-54061 None:intergenic 55.0%
! AAGGAAAAGGGCACGGGTAG+AGG - tig0016544:54043-54062 None:intergenic 55.0%
!! CTATTGGTCTTCCAGACCCG+AGG + tig0016544:54079-54098 Msa1358890:intron 55.0%
CTAACTAAGCCGTGGACCTC+GGG - tig0016544:54098-54117 None:intergenic 55.0%
TGCGAGTATGTGATGCCACG+AGG + tig0016544:55208-55227 Msa1358890:intron 55.0%
GCTGTGATTGTTGGAGAGCC+AGG - tig0016544:56903-56922 None:intergenic 55.0%
GCTTAGCTGCCTCGACCATA+TGG + tig0016544:58083-58102 Msa1358890:three_prime_UTR 55.0%
TGCTGAAGACGATGCCTCGG+TGG + tig0016544:49224-49243 Msa1358890:CDS 60.0%
GGGGCTGTAAAACTCCACCG+AGG - tig0016544:49241-49260 None:intergenic 60.0%
! CGGTGGAGTTTTACAGCCCC+AGG + tig0016544:49241-49260 Msa1358890:CDS 60.0%
! CAGCCCCAGGAATGAGTTGG+AGG + tig0016544:49254-49273 Msa1358890:CDS 60.0%
GATGTTGAAGGAGCAGGCCG+GGG + tig0016544:49630-49649 Msa1358890:intron 60.0%
CAGGCCGGGGAATGATAGCA+GGG + tig0016544:49643-49662 Msa1358890:CDS 60.0%
! CCTTTTCCCCTGAGAACCGG+AGG - tig0016544:50622-50641 None:intergenic 60.0%
CCTCCGGTTCTCAGGGGAAA+AGG + tig0016544:50619-50638 Msa1358890:intron 60.0%
! GGCCCTTTTCCCCTGAGAAC+CGG - tig0016544:50625-50644 None:intergenic 60.0%
GTTCTCAGGGGAAAAGGGCC+TGG + tig0016544:50625-50644 Msa1358890:intron 60.0%
AACAGGCCTAGAGTAGGGGG+GGG - tig0016544:51037-51056 None:intergenic 60.0%
AGATGACCCCACAACTCCCC+AGG + tig0016544:53892-53911 Msa1358890:intron 60.0%
GATGACCCCACAACTCCCCA+GGG + tig0016544:53893-53912 Msa1358890:intron 60.0%
TCTTCCAGACCCGAGGTCCA+CGG + tig0016544:54086-54105 Msa1358890:intron 60.0%
GCTCGACGCTCGATTGGGTA+CGG - tig0016544:54702-54721 None:intergenic 60.0%
AATGCAGGAAGGGGCTGGAG+AGG - tig0016544:55739-55758 None:intergenic 60.0%
TGGACGACTCACATGGTGCG+TGG + tig0016544:56875-56894 Msa1358890:CDS 60.0%
CTCACATGGTGCGTGGTACC+TGG + tig0016544:56882-56901 Msa1358890:CDS 60.0%
GCAGGCCGGGGAATGATAGC+AGG + tig0016544:49642-49661 Msa1358890:CDS 65.0%
ACAGGCCTAGAGTAGGGGGG+GGG - tig0016544:51036-51055 None:intergenic 65.0%
TAAGCCGTGGACCTCGGGTC+TGG - tig0016544:54093-54112 None:intergenic 65.0%
CGACGCTCGATTGGGTACGG+TGG - tig0016544:54699-54718 None:intergenic 65.0%
AGGCCTAGAGTAGGGGGGGG+GGG - tig0016544:51034-51053 None:intergenic 70.0%
CAGGCCTAGAGTAGGGGGGG+GGG - tig0016544:51035-51054 None:intergenic 70.0%
TAGAGTAGGGGGGGGGGGGG+GGG - tig0016544:51029-51048 None:intergenic 75.0%
CTAGAGTAGGGGGGGGGGGG+GGG - tig0016544:51030-51049 None:intergenic 75.0%
CCTAGAGTAGGGGGGGGGGG+GGG - tig0016544:51031-51050 None:intergenic 75.0%
GCCTAGAGTAGGGGGGGGGG+GGG - tig0016544:51032-51051 None:intergenic 75.0%
GGCCTAGAGTAGGGGGGGGG+GGG - tig0016544:51033-51052 None:intergenic 75.0%
! AGAGTAGGGGGGGGGGGGGG+GGG - tig0016544:51028-51047 None:intergenic 80.0%
! CCCCCCCCCCCCCCTACTCT+AGG + tig0016544:51028-51047 Msa1358890:intron 80.0%
! AGTAGGGGGGGGGGGGGGGG+GGG - tig0016544:51026-51045 None:intergenic 85.0%
! GAGTAGGGGGGGGGGGGGGG+GGG - tig0016544:51027-51046 None:intergenic 85.0%
! TAGGGGGGGGGGGGGGGGGG+GGG - tig0016544:51024-51043 None:intergenic 90.0%
! GTAGGGGGGGGGGGGGGGGG+GGG - tig0016544:51025-51044 None:intergenic 90.0%
! GGGGGGGGGGGGGGGTGGGG+GGG - tig0016544:51012-51031 None:intergenic 95.0%
! GGGGGGGGGGGGGGGGTGGG+GGG - tig0016544:51013-51032 None:intergenic 95.0%
! GGGGGGGGGGGGGGGGGTGG+GGG - tig0016544:51014-51033 None:intergenic 95.0%
! GGGGGGGGGGGGGGGGGGTG+GGG - tig0016544:51015-51034 None:intergenic 95.0%
! GGGGGGGGGGGGGGGGGGGT+GGG - tig0016544:51016-51035 None:intergenic 95.0%
! AGGGGGGGGGGGGGGGGGGG+GGG - tig0016544:51023-51042 None:intergenic 95.0%
Chromosome Type Strat End Strand Name
tig0016544 gene 47149 58337 47149 ID=Msa1358890;Name=Msa1358890
tig0016544 mRNA 47149 58337 47149 ID=Msa1358890-mRNA-1;Parent=Msa1358890;Name=Msa1358890-mRNA-1;_AED=0.13;_eAED=0.13;_QI=114|1|1|1|0.90|0.91|12|351|547
tig0016544 exon 47149 47260 47149 ID=Msa1358890-mRNA-1:exon:11099;Parent=Msa1358890-mRNA-1
tig0016544 exon 47858 47931 47858 ID=Msa1358890-mRNA-1:exon:11100;Parent=Msa1358890-mRNA-1
tig0016544 exon 48832 48960 48832 ID=Msa1358890-mRNA-1:exon:11101;Parent=Msa1358890-mRNA-1
tig0016544 exon 49210 49504 49210 ID=Msa1358890-mRNA-1:exon:11102;Parent=Msa1358890-mRNA-1
tig0016544 exon 49631 49749 49631 ID=Msa1358890-mRNA-1:exon:11103;Parent=Msa1358890-mRNA-1
tig0016544 exon 50327 50459 50327 ID=Msa1358890-mRNA-1:exon:11104;Parent=Msa1358890-mRNA-1
tig0016544 exon 52908 52984 52908 ID=Msa1358890-mRNA-1:exon:11105;Parent=Msa1358890-mRNA-1
tig0016544 exon 55803 56000 55803 ID=Msa1358890-mRNA-1:exon:11106;Parent=Msa1358890-mRNA-1
tig0016544 exon 56495 56684 56495 ID=Msa1358890-mRNA-1:exon:11107;Parent=Msa1358890-mRNA-1
tig0016544 exon 56825 57003 56825 ID=Msa1358890-mRNA-1:exon:11108;Parent=Msa1358890-mRNA-1
tig0016544 exon 57338 57438 57338 ID=Msa1358890-mRNA-1:exon:11109;Parent=Msa1358890-mRNA-1
tig0016544 exon 57836 58337 57836 ID=Msa1358890-mRNA-1:exon:11110;Parent=Msa1358890-mRNA-1
tig0016544 five_prime_UTR 47149 47260 47149 ID=Msa1358890-mRNA-1:five_prime_utr;Parent=Msa1358890-mRNA-1
tig0016544 five_prime_UTR 47858 47859 47858 ID=Msa1358890-mRNA-1:five_prime_utr;Parent=Msa1358890-mRNA-1
tig0016544 CDS 47860 47931 47860 ID=Msa1358890-mRNA-1:cds;Parent=Msa1358890-mRNA-1
tig0016544 CDS 48832 48960 48832 ID=Msa1358890-mRNA-1:cds;Parent=Msa1358890-mRNA-1
tig0016544 CDS 49210 49504 49210 ID=Msa1358890-mRNA-1:cds;Parent=Msa1358890-mRNA-1
tig0016544 CDS 49631 49749 49631 ID=Msa1358890-mRNA-1:cds;Parent=Msa1358890-mRNA-1
tig0016544 CDS 50327 50459 50327 ID=Msa1358890-mRNA-1:cds;Parent=Msa1358890-mRNA-1
tig0016544 CDS 52908 52984 52908 ID=Msa1358890-mRNA-1:cds;Parent=Msa1358890-mRNA-1
tig0016544 CDS 55803 56000 55803 ID=Msa1358890-mRNA-1:cds;Parent=Msa1358890-mRNA-1
tig0016544 CDS 56495 56684 56495 ID=Msa1358890-mRNA-1:cds;Parent=Msa1358890-mRNA-1
tig0016544 CDS 56825 57003 56825 ID=Msa1358890-mRNA-1:cds;Parent=Msa1358890-mRNA-1
tig0016544 CDS 57338 57438 57338 ID=Msa1358890-mRNA-1:cds;Parent=Msa1358890-mRNA-1
tig0016544 CDS 57836 57986 57836 ID=Msa1358890-mRNA-1:cds;Parent=Msa1358890-mRNA-1
tig0016544 three_prime_UTR 57987 58337 57987 ID=Msa1358890-mRNA-1:three_prime_utr;Parent=Msa1358890-mRNA-1
Gene Sequence

>Msa1358890

ATGGATAGTGACGAGGAGTGCTCAATTGTTCTTGAGTTATCTGAAAATGATCCTTTCTTTGATGAAAAGAAGAAATTACTACGATGTAAGGGGTTTGGTCCCAAGGAATGGATACATCTCAAGTGCTCCTCAGGACCTTCTTGGATGAATGATATCGTAAAGATCTTACTTCAGATTGCAAGAATCATACAGTTAAACGAGCTGGAACTCTATTTTGCTGAAGACGATGCCTCGGTGGAGTTTTACAGCCCCAGGAATGAGTTGGAGGCTCTCAATTCAATTGTTTCGCTCACCGACAAATCACTTTCTAGTTGTCCACATTTCCATACAAACATCCTGCAAGGGTTACAACAAAAGATTTTTGATTTAATTTCTGATTTTGGGGACCAAAACAATATGAAGGGAGTACTTGAAAAGTACTACAGTTGTGAGAGAGAAGAACACCTGATTGAGTGGGGTAAAAGCCATGGTGTAAAGACAGGATTAAAGATAGCTTATGTTGAAGGAGCAGGCCGGGGAATGATAGCAGGGAAAGATCTAAAAGTTGGAGATACTGCTATAGAGATTCCCGTGTCCATTATCATTTCTGAGGAGCTTGTGCTTGAAACTGATATGTATCGTCTCTTGAAAGAGGTTGATGGCATATCATCTGAGACAATATTGCTGTTATGGAGTATGAAAGAGAAGTACAACTGTGATTCAAAATTCAAAATTTACTTTGACACACTTCCAGAAAAATTTAATACAGGATTGAGTTTTGGGATTGAAGCGATTACAATGCTAGATGGAACCTTGCTGTTTGAAGAGATAATGCAATCAAGACAGCACTTGCATGCTCAGTATGATGAGTTGGTTCCTGCTTTGTGCAATGGTTTTCCTGATATATTTCCTCCAGAGATTTACACTTGGGAGAATTTTTTATGGGCTTGTGAACTTTGGTATTCCAATAGCATGAAGATAATGTATTCAGATGGAAAACTGAGGACATGTTTGATACCTCTTGCTGGCTTTCTTAATCATTCACTGTGCCCACATATTACACACTATGGCAAAGTAGATCCTTCAACAAATTCATTGAAATTTTGTCTATCAAGACCATGCCGATCTGGAGAAGAATGCTGCTTAAGCTATGGGAACTTCTCCAGCTCTCATTTTATTACATTTTATGGTTTCTTACCTCAAGGAGACAACCCGTATGATGTCATTCCTTTAGACATCGATAGTTCTGATGTTGATTCTATTGAGGATAAACCTGTGTCCAAATGGACGACTCACATGGTGCGTGGTACCTGGCTCTCCAACAATCACAGCATATTCTATTATGGTCTTCCCTCTCCATTATTGGATCATCTTCGGAGATCTCGAAGTCCTGTGATGCAAACAAAGACTTTCTTGCAAGGAAACTTGGAAAATGAGCTAGAAGTTCTTGGAGATCTCAAAGACATCTTTGACGACATGATGGACAGTATGGGTGAAGTCGATCTTGATAACAGAGAAAGCTACACCTGGGATGAAAAATTGGCTGTGGATTGTAAAAATCTACAAAGACGAATAGCCCATTCTGTTTCAACTTCTTGCTGTACTGGGATCAACATGTTGAAGAATGAACTGCACAAGTGTTTGGCTGAGGACATTGTAGGTTAA
Protein sequence

>Msa1358890

MDSDEECSIVLELSENDPFFDEKKKLLRCKGFGPKEWIHLKCSSGPSWMNDIVKILLQIARIIQLNELELYFAEDDASVEFYSPRNELEALNSIVSLTDKSLSSCPHFHTNILQGLQQKIFDLISDFGDQNNMKGVLEKYYSCEREEHLIEWGKSHGVKTGLKIAYVEGAGRGMIAGKDLKVGDTAIEIPVSIIISEELVLETDMYRLLKEVDGISSETILLLWSMKEKYNCDSKFKIYFDTLPEKFNTGLSFGIEAITMLDGTLLFEEIMQSRQHLHAQYDELVPALCNGFPDIFPPEIYTWENFLWACELWYSNSMKIMYSDGKLRTCLIPLAGFLNHSLCPHITHYGKVDPSTNSLKFCLSRPCRSGEECCLSYGNFSSSHFITFYGFLPQGDNPYDVIPLDIDSSDVDSIEDKPVSKWTTHMVRGTWLSNNHSIFYYGLPSPLLDHLRRSRSPVMQTKTFLQGNLENELEVLGDLKDIFDDMMDSMGEVDLDNRESYTWDEKLAVDCKNLQRRIAHSVSTSCCTGINMLKNELHKCLAEDIVG*