AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa0815420

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0815420 MtrunA17_Chr5g0433301 96.520 862 9 1 1 862 1 841 0.0 1711
Msa0815420 MtrunA17_Chr3g0109391 80.206 874 136 13 1 862 1 849 0.0 1350
Msa0815420 MtrunA17_Chr2g0285461 57.342 933 302 21 1 862 1 908 0.0 911
Msa0815420 MtrunA17_Chr8g0376771 73.592 515 103 11 1 511 1 486 0.0 732
Msa0815420 MtrunA17_Chr1g0156321 43.265 876 396 23 16 841 35 859 0.0 593
Msa0815420 MtrunA17_Chr4g0070181 63.488 430 132 8 16 443 15 421 1.70e-168 518
Msa0815420 MtrunA17_Chr4g0070181 50.459 109 54 0 716 824 974 1082 3.40e-29 125
Msa0815420 MtrunA17_Chr2g0301251 70.027 367 104 6 1 366 1 362 7.75e-165 509
Msa0815420 MtrunA17_Chr2g0301251 59.341 91 37 0 738 828 988 1078 1.09e-29 127
Msa0815420 MtrunA17_Chr8g0389081 69.591 342 102 2 21 361 29 369 1.56e-152 476
Msa0815420 MtrunA17_Chr8g0389081 63.218 87 32 0 738 824 987 1073 1.93e-30 129
Msa0815420 MtrunA17_Chr2g0276781 54.391 353 152 4 15 364 14 360 9.50e-125 391
Msa0815420 MtrunA17_Chr2g0276781 35.135 111 68 3 715 824 528 635 6.63e-14 75.9
Msa0815420 MtrunA17_Chr8g0385791 51.467 375 175 4 6 380 43 410 1.94e-122 390
Msa0815420 MtrunA17_Chr8g0385791 44.828 87 46 2 739 824 713 798 9.82e-16 82.0
Msa0815420 MtrunA17_Chr8g0346711 48.469 392 186 6 3 383 8 394 9.05e-118 373
Msa0815420 MtrunA17_Chr8g0346711 41.772 79 44 1 746 824 569 645 6.13e-14 75.9
Msa0815420 MtrunA17_Chr4g0029671 50.137 365 168 6 24 377 54 415 5.07e-111 358
Msa0815420 MtrunA17_Chr4g0029671 44.186 86 46 2 740 824 667 751 1.95e-17 87.4
Msa0815420 MtrunA17_Chr2g0326281 49.337 377 164 7 24 376 56 429 7.25e-111 358
Msa0815420 MtrunA17_Chr2g0326281 35.971 139 82 4 691 824 647 783 3.04e-19 93.2
Msa0815420 MtrunA17_Chr4g0009751 50.829 362 168 7 20 377 15 370 2.34e-110 352
Msa0815420 MtrunA17_Chr4g0046371 47.872 376 170 6 15 376 31 394 5.36e-109 350
Msa0815420 MtrunA17_Chr2g0282961 48.800 375 154 7 20 376 51 405 1.67e-108 346
Msa0815420 MtrunA17_Chr7g0239061 48.238 369 182 7 15 380 5 367 2.19e-108 348
Msa0815420 MtrunA17_Chr7g0239061 41.772 79 44 1 746 824 581 657 3.31e-14 76.6
Msa0815420 MtrunA17_Chr2g0326761 40.887 406 188 9 18 380 5 401 1.66e-84 285
Msa0815420 MtrunA17_Chr1g0199681 39.642 391 189 8 14 366 84 465 4.00e-82 278
Msa0815420 MtrunA17_Chr4g0028971 39.494 395 183 8 17 365 5 389 2.05e-79 271
Msa0815420 MtrunA17_Chr1g0181211 35.204 392 202 5 18 364 21 405 3.93e-72 251
Msa0815420 MtrunA17_Chr3g0115271 36.154 390 207 6 21 376 16 397 1.42e-65 230
Msa0815420 MtrunA17_Chr7g0264171 35.000 400 199 9 19 367 26 415 8.01e-65 229
Msa0815420 MtrunA17_Chr7g0264161 37.419 310 181 6 33 338 1 301 2.25e-59 204
Msa0815420 MtrunA17_Chr5g0424931 34.021 388 207 10 21 377 16 385 2.94e-57 205
Msa0815420 MtrunA17_Chr5g0417281 32.440 373 223 10 21 385 8 359 9.76e-56 201
Msa0815420 MtrunA17_Chr5g0436761 33.884 363 214 9 17 371 5 349 1.42e-54 196
Msa0815420 MtrunA17_Chr8g0356211 41.850 227 124 5 136 360 2 222 2.00e-53 188
Msa0815420 MtrunA17_Chr1g0178011 31.746 378 228 11 19 386 7 364 1.79e-50 184
Msa0815420 MtrunA17_Chr2g0277461 31.445 353 220 9 24 371 13 348 5.50e-44 166
Msa0815420 MtrunA17_Chr2g0289221 34.146 328 177 12 24 338 20 321 8.46e-44 162
Msa0815420 MtrunA17_Chr5g0417211 31.250 336 183 10 21 338 9 314 4.30e-41 156
Msa0815420 MtrunA17_Chr5g0424741 27.913 369 228 7 21 358 9 370 2.07e-37 147
Msa0815420 MtrunA17_Chr2g0277531 29.712 313 186 11 21 321 17 307 2.90e-34 134
Msa0815420 MtrunA17_Chr5g0424801 29.155 343 222 9 21 358 9 335 4.99e-34 134
Msa0815420 MtrunA17_Chr5g0425661 35.437 206 121 3 23 224 36 233 1.41e-33 129
Msa0815420 MtrunA17_Chr5g0425261 29.155 343 222 9 21 358 9 335 9.00e-33 130
Msa0815420 MtrunA17_Chr5g0419811 45.522 134 50 2 600 710 27 160 5.29e-26 105
Msa0815420 MtrunA17_Chr1g0156301 38.462 104 48 1 738 841 179 266 2.82e-16 80.1
Msa0815420 MtrunA17_Chr5g0424791 34.868 152 84 6 76 224 12 151 1.69e-15 74.7
Msa0815420 MtrunA17_Chr1g0156311 41.593 113 33 2 246 358 1 80 1.64e-12 63.9
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0815420 AT5G37020.1 67.060 847 220 15 1 833 1 802 0.0 1063
Msa0815420 AT5G37020.2 67.237 818 209 16 1 804 1 773 0.0 1022
Msa0815420 AT5G37020.3 64.533 750 209 14 98 833 1 707 0.0 879
Msa0815420 AT1G19220.1 55.598 518 193 11 1 508 1 491 8.48e-166 511
Msa0815420 AT1G19220.1 55.446 101 45 0 738 838 960 1060 2.17e-29 126
Msa0815420 AT1G19850.2 62.634 372 134 3 11 380 30 398 6.29e-158 484
Msa0815420 AT1G19850.2 53.684 95 44 0 738 832 784 878 2.35e-26 116
Msa0815420 AT1G19850.1 62.634 372 134 3 11 380 41 409 6.79e-158 485
Msa0815420 AT1G19850.1 53.684 95 44 0 738 832 795 889 2.17e-26 116
Msa0815420 AT5G20730.2 67.480 369 114 6 4 370 5 369 3.91e-157 490
Msa0815420 AT5G20730.2 35.887 248 130 7 605 824 879 1125 7.59e-29 125
Msa0815420 AT5G20730.3 67.297 370 114 7 4 370 5 370 2.21e-155 485
Msa0815420 AT5G20730.3 35.887 248 130 7 605 824 880 1126 7.07e-29 125
Msa0815420 AT5G20730.1 67.297 370 114 7 4 370 5 370 3.75e-155 485
Msa0815420 AT5G20730.1 35.887 248 130 7 605 824 880 1126 8.07e-29 125
Msa0815420 AT5G62000.2 54.017 361 161 3 20 380 57 412 1.90e-128 407
Msa0815420 AT5G62000.2 41.414 99 53 3 730 824 724 821 2.61e-15 80.9
Msa0815420 AT5G62000.5 54.017 361 161 3 20 380 57 412 1.90e-128 407
Msa0815420 AT5G62000.5 41.414 99 53 3 730 824 724 821 2.61e-15 80.9
Msa0815420 AT5G62000.3 54.017 361 161 3 20 380 57 412 1.90e-128 407
Msa0815420 AT5G62000.3 41.414 99 53 3 730 824 724 821 2.61e-15 80.9
Msa0815420 AT5G62000.1 54.017 361 161 3 20 380 57 412 1.90e-128 407
Msa0815420 AT5G62000.1 41.414 99 53 3 730 824 724 821 2.61e-15 80.9
Msa0815420 AT5G62000.4 54.017 361 161 3 20 380 57 412 3.61e-128 405
Msa0815420 AT5G62000.4 41.414 99 53 3 730 824 724 821 2.80e-15 80.9
Msa0815420 AT1G59750.2 50.369 407 190 6 8 406 1 403 9.31e-124 388
Msa0815420 AT1G59750.2 39.080 87 51 2 739 824 542 627 2.55e-14 77.4
Msa0815420 AT1G59750.1 51.151 391 181 5 8 391 1 388 3.57e-123 387
Msa0815420 AT1G59750.1 39.080 87 51 2 739 824 545 630 2.65e-14 77.4
Msa0815420 AT1G59750.3 51.151 391 181 5 8 391 1 388 3.57e-123 387
Msa0815420 AT1G59750.3 39.080 87 51 2 739 824 545 630 2.65e-14 77.4
Msa0815420 AT1G59750.4 51.414 389 177 6 8 388 1 385 4.79e-123 386
Msa0815420 AT1G59750.4 39.080 87 51 2 739 824 540 625 2.66e-14 77.4
Msa0815420 AT5G60450.2 52.000 375 166 6 14 378 31 401 2.56e-119 380
Msa0815420 AT5G60450.2 41.237 97 55 2 737 832 642 737 1.08e-18 91.7
Msa0815420 AT5G60450.1 52.717 368 160 6 21 378 62 425 1.76e-118 378
Msa0815420 AT5G60450.1 42.391 92 51 2 737 827 666 756 1.27e-18 91.7
Msa0815420 AT3G61830.1 53.026 347 155 7 21 365 22 362 8.45e-116 365
Msa0815420 AT3G61830.1 41.772 79 44 1 746 824 500 576 2.23e-12 71.2
Msa0815420 AT2G46530.1 50.704 355 168 6 15 368 12 360 9.84e-114 360
Msa0815420 AT2G46530.1 36.364 99 60 2 732 829 486 582 2.63e-12 70.9
Msa0815420 AT2G46530.3 50.704 355 168 6 15 368 33 381 2.58e-113 360
Msa0815420 AT2G46530.3 36.364 99 60 2 732 829 507 603 3.33e-12 70.9
Msa0815420 AT2G33860.1 48.739 357 155 6 16 359 48 389 7.62e-109 347
Msa0815420 AT4G23980.1 48.800 375 168 9 12 377 2 361 1.33e-104 337
Msa0815420 AT4G23980.1 32.335 167 96 7 667 824 452 610 1.77e-14 78.2
Msa0815420 AT4G23980.2 48.800 375 168 9 12 377 2 361 1.38e-104 337
Msa0815420 AT4G23980.2 29.694 229 133 11 615 824 389 608 1.64e-14 78.2
Msa0815420 AT3G61830.2 52.215 316 143 7 52 365 2 311 7.65e-100 322
Msa0815420 AT3G61830.2 41.772 79 44 1 746 824 449 525 1.89e-12 71.2
Msa0815420 AT1G34410.1 42.432 370 194 6 12 376 15 370 5.25e-90 297
Msa0815420 AT1G35540.1 42.450 351 183 6 16 361 19 355 1.44e-87 291
Msa0815420 AT1G35540.1 32.407 108 68 3 720 824 492 597 2.64e-11 67.8
Msa0815420 AT1G34310.1 42.350 366 192 6 16 376 19 370 1.78e-87 290
Msa0815420 AT1G35240.1 41.803 366 194 6 16 376 19 370 2.05e-87 290
Msa0815420 AT1G35520.1 41.600 375 197 7 18 384 21 381 4.95e-85 284
Msa0815420 AT2G33860.2 56.034 232 101 1 128 359 2 232 8.89e-84 276
Msa0815420 AT1G34170.1 42.486 346 186 7 18 360 19 354 3.74e-83 276
Msa0815420 AT4G30080.1 38.824 425 190 14 14 386 9 415 8.83e-81 274
Msa0815420 AT1G34390.1 41.379 377 197 8 16 384 19 379 8.95e-81 272
Msa0815420 AT2G28350.2 39.348 399 177 10 17 364 3 387 1.02e-79 271
Msa0815420 AT2G28350.1 39.348 399 177 10 17 364 3 387 1.34e-79 271
Msa0815420 AT2G46530.2 51.406 249 117 3 120 368 29 273 3.19e-79 266
Msa0815420 AT2G46530.2 36.364 99 60 2 732 829 399 495 1.75e-12 71.2
Msa0815420 AT1G34170.2 39.306 346 171 6 18 360 19 328 5.39e-73 248
Msa0815420 AT1G34170.3 39.306 346 171 6 18 360 19 328 2.75e-72 248
Msa0815420 AT1G77850.1 34.236 406 221 9 21 391 16 410 5.59e-57 206
Msa0815420 AT1G77850.2 34.236 406 221 9 21 391 16 410 5.86e-57 206
Msa0815420 AT1G30330.3 42.105 304 133 6 590 861 619 911 2.79e-55 207
Msa0815420 AT1G30330.2 42.105 304 133 6 590 861 619 911 2.79e-55 207
Msa0815420 AT1G30330.1 42.105 304 133 6 590 861 617 909 2.86e-55 207
Msa0815420 AT1G43950.1 42.396 217 107 5 16 227 19 222 4.58e-48 170

Find 255 sgRNAs with CRISPR-Local

Find 700 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
ACGTTTCTTCCTATGGAATT+AGG 0.126366 5_3:+48983402 Msa0815420:CDS
CCCCAAACAGAACAGAATTT+TGG 0.138292 5_3:-48990445 None:intergenic
TTTCACTTGGTTTCCTCTTT+TGG 0.156985 5_3:+48981923 Msa0815420:five_prime_UTR
CCCAAAATTCTGTTCTGTTT+GGG 0.157459 5_3:+48990444 Msa0815420:CDS
TTTCTGTCGGTATGCGTTTC+AGG 0.158049 5_3:+48986999 Msa0815420:CDS
GTACACAGCTTTGATATATT+TGG 0.159080 5_3:-48986966 None:intergenic
TCCTGAAGATATTCAGAAAA+TGG 0.166038 5_3:+48991351 Msa0815420:CDS
GAATCTCACGACATTGTTTC+TGG 0.168594 5_3:+48991436 Msa0815420:CDS
TGAAAAGAATCAGCTTCTTT+TGG 0.219750 5_3:+48986687 Msa0815420:CDS
ACAGACCTCCAATGAGAATT+TGG 0.247430 5_3:-48988716 None:intergenic
CTTCTTCAGTTTCATTTCAA+TGG 0.262591 5_3:+48981845 Msa0815420:five_prime_UTR
CGTTTCTTCCTATGGAATTA+GGG 0.270900 5_3:+48983403 Msa0815420:CDS
GCCATGGTCGTTTCAATCTA+AGG 0.278500 5_3:-48989354 None:intergenic
TAACACCATATTTCTGCTTT+TGG 0.284215 5_3:-48991835 None:intergenic
TTAGTTTCTCTACCAACTTC+AGG 0.304112 5_3:+48982783 Msa0815420:CDS
TTACTATTATTATTTGTATC+AGG 0.305274 5_3:+48991739 Msa0815420:three_prime_UTR
GAGGATGGGGACTCTGAGTT+AGG 0.306455 5_3:+48982245 Msa0815420:five_prime_UTR
AAGGGAATGTAGATCTATTA+AGG 0.311704 5_3:+48989865 Msa0815420:CDS
GAATCCCTTGGTCCAAGTTC+TGG 0.311816 5_3:+48991388 Msa0815420:CDS
TACATTGGAAATGTAGTTAA+AGG 0.316141 5_3:-48989316 None:intergenic
ATGTCGCATGTGCAGTATTC+CGG 0.318047 5_3:+48990380 Msa0815420:CDS
AAACCAGATTTCATAGATTC+AGG 0.326405 5_3:+48990176 Msa0815420:CDS
GCCCAAAATTCTGTTCTGTT+TGG 0.329414 5_3:+48990443 Msa0815420:CDS
GATAACTTTGTTGCTGTGTT+TGG 0.334518 5_3:-48990079 None:intergenic
TACGATTGATGTATCTCTTC+CGG 0.336305 5_3:-48990399 None:intergenic
GAATCTTGCATGCAAGGATA+TGG 0.339276 5_3:-48990584 None:intergenic
GGTATGAGTGAATGTAATAA+TGG 0.340613 5_3:+48982209 Msa0815420:five_prime_UTR
GTTAGGGGAGTCTAGTTTCC+AGG 0.341450 5_3:+48990556 Msa0815420:CDS
AGGCATGAAGTTTGCTGCTT+CGG 0.349397 5_3:+48990196 Msa0815420:CDS
GTTTCTGGACTACCATCATT+AGG 0.349414 5_3:+48991451 Msa0815420:CDS
GAGGAGTTGGCTCAGATGTT+TGG 0.356281 5_3:+48990836 Msa0815420:CDS
AGCAACTAATAGCTGCTTTA+CGG 0.356761 5_3:+48986810 Msa0815420:CDS
GAAAGATACGTTTCTTCCTA+TGG 0.361096 5_3:+48983395 Msa0815420:CDS
TCCAGCACCTTGAAAATTCA+TGG 0.362428 5_3:-48989742 None:intergenic
ACTGCTATTGTTGTAGCATT+TGG 0.366260 5_3:+48991857 Msa0815420:three_prime_UTR
ATGCCTGAATCTATGAAATC+TGG 0.370393 5_3:-48990179 None:intergenic
AATAAGACCTTCACAAATAT+CGG 0.370930 5_3:-48990656 None:intergenic
ACTTGGACCAAGGGATTCTA+TGG 0.377464 5_3:-48991383 None:intergenic
TTCATCCTTTGTCCAGAACT+TGG 0.383578 5_3:-48991400 None:intergenic
TGGCACACAAGTTTACAAAT+TGG 0.384768 5_3:-48991815 None:intergenic
TAATTTGTAGGCTGCTTACT+TGG 0.387254 5_3:-48983429 None:intergenic
GTGAATGTAATAATGGGTTT+GGG 0.387641 5_3:+48982216 Msa0815420:five_prime_UTR
AATTGTACAGTTAGAAATCT+AGG 0.388948 5_3:+48991894 Msa0815420:three_prime_UTR
TCCATTGTGCATAGGTTGGT+TGG 0.395710 5_3:+48989239 Msa0815420:intron
GATCATTTGTCAATAATGTT+TGG 0.398477 5_3:+48991311 Msa0815420:intron
GTTTGCTGCTTCGGTTTCAC+CGG 0.398947 5_3:+48990205 Msa0815420:CDS
GGCTCAGATGTTTGGAATTG+AGG 0.399052 5_3:+48990844 Msa0815420:CDS
AGCTGATGCAGTAGTATAAC+GGG 0.401952 5_3:-48990510 None:intergenic
ATCAATTTCTCTGTTGGTTG+TGG 0.402028 5_3:-48983042 None:intergenic
GACAGCCACGAGTATCGTTA+TGG 0.407547 5_3:+48989284 Msa0815420:CDS
TTCTCATTGGAGGTCTGTTA+AGG 0.408471 5_3:+48988721 Msa0815420:CDS
AGTGAATGTAATAATGGGTT+TGG 0.414876 5_3:+48982215 Msa0815420:five_prime_UTR
CTTGGTTCACTTTCTTCTGA+AGG 0.415434 5_3:+48990239 Msa0815420:CDS
GGCAGCTTGTATTTGTCGAC+AGG 0.419769 5_3:+48990897 Msa0815420:CDS
TGAGAATTTGGCCACCGAAC+AGG 0.420532 5_3:-48988704 None:intergenic
AAAATTGTGTCTTTATAAAG+AGG 0.421389 5_3:+48982293 Msa0815420:five_prime_UTR
TCGGAGTTGTTGCAAAGTGC+AGG 0.421931 5_3:+48990608 Msa0815420:CDS
ATGTGGATGCGAGGCGGTCC+TGG 0.424062 5_3:+48989702 Msa0815420:CDS
AACAGTCACCTCAACAATCA+TGG 0.424537 5_3:+48990312 Msa0815420:CDS
GTTATGAAGCTTTCAACATC+AGG 0.426677 5_3:+48982339 Msa0815420:exon
CATGATATTATTAGTTGATA+CGG 0.427975 5_3:-48989982 None:intergenic
AAGGTGCTGGATTGTTGCCC+TGG 0.429616 5_3:+48989754 Msa0815420:CDS
ACCTTGTTTGTGCAGGTACA+TGG 0.430262 5_3:+48988652 Msa0815420:intron
CCTGAAGATATTCAGAAAAT+GGG 0.436474 5_3:+48991352 Msa0815420:CDS
CCTTTCAATTATCAACAATC+AGG 0.439845 5_3:+48989912 Msa0815420:CDS
CAAGCCATGTTGGCTGCTGC+TGG 0.444005 5_3:+48989831 Msa0815420:CDS
GGCGGCAAGCTAGGATAATT+CGG 0.445338 5_3:-48983074 None:intergenic
TCACGAGCTGCGGGAGGAGT+TGG 0.446108 5_3:+48990823 Msa0815420:CDS
TAATGGGTTTGGGGAAATTG+AGG 0.447037 5_3:+48982226 Msa0815420:five_prime_UTR
TTCGGTGGCCAAATTCTCAT+TGG 0.448662 5_3:+48988708 Msa0815420:CDS
CCATTGTGCATAGGTTGGTT+GGG 0.449329 5_3:+48989240 Msa0815420:intron
TTTGAAGATCCTCTTAGATC+AGG 0.451717 5_3:+48990872 Msa0815420:CDS
GTGTGCCAAAAGCAGAAATA+TGG 0.451746 5_3:+48991830 Msa0815420:three_prime_UTR
AGACTCGATCCAACTTTGCT+TGG 0.451906 5_3:+48989786 Msa0815420:CDS
GGCAGAGATGAGGCAACTAA+TGG 0.452894 5_3:+48989675 Msa0815420:CDS
ATCGAGTCTTGGCTGCATCC+AGG 0.452925 5_3:-48989772 None:intergenic
TTGTCCATCAATTTCTCTGT+TGG 0.456717 5_3:-48983048 None:intergenic
TTTGTCTCCTTTCTTTACAA+AGG 0.457981 5_3:+48989638 Msa0815420:CDS
GCTCAGATGTTTGGAATTGA+GGG 0.458722 5_3:+48990845 Msa0815420:CDS
GGATGGAGTGCATTGGAAAG+TGG 0.459683 5_3:+48982180 Msa0815420:five_prime_UTR
ATGCATCGACAATGCCGTTA+GGG 0.462289 5_3:+48990540 Msa0815420:CDS
TAGTTTCTCTACCAACTTCA+GGG 0.464443 5_3:+48982784 Msa0815420:CDS
CCAAAATTCTGTTCTGTTTG+GGG 0.464487 5_3:+48990445 Msa0815420:CDS
AACTAGAGTGTTGCTTCTGA+TGG 0.464826 5_3:-48990133 None:intergenic
TTAATAGATCTACATTCCCT+TGG 0.465558 5_3:-48989863 None:intergenic
TGAAGTTGGTAGAGAAACTA+AGG 0.467728 5_3:-48982781 None:intergenic
GGTTGGGATGAATCGACAGC+TGG 0.467846 5_3:+48989256 Msa0815420:CDS
GGAAATAGTGATGGATACAT+TGG 0.468477 5_3:-48989331 None:intergenic
GTTTGGGGAAATTGAGGATG+GGG 0.469302 5_3:+48982232 Msa0815420:five_prime_UTR
GCATTGTAACATTATGAAGT+TGG 0.469818 5_3:-48983109 None:intergenic
TACCGACAGAAACGCGTGTA+TGG 0.471442 5_3:-48986988 None:intergenic
GATGCATCGACAATGCCGTT+AGG 0.472307 5_3:+48990539 Msa0815420:CDS
CATAACAGTTTGTGGCCTAC+TGG 0.472353 5_3:-48986722 None:intergenic
CCTTCACAAATATCGGTGTC+TGG 0.475371 5_3:-48990649 None:intergenic
GGGGTCAATATCGATTCGTC+TGG 0.476741 5_3:+48990464 Msa0815420:CDS
GAGAACGATGTTCTTCTCCT+TGG 0.480918 5_3:+48990920 Msa0815420:CDS
AGCTGCCAGCCTGATCTAAG+AGG 0.481740 5_3:-48990881 None:intergenic
GTATGAGTGAATGTAATAAT+GGG 0.482880 5_3:+48982210 Msa0815420:five_prime_UTR
ACAACATCCTTTGTAAAGAA+AGG 0.484793 5_3:-48989645 None:intergenic
AAAGATTCTCCGCCAAGCCT+TGG 0.484860 5_3:-48990016 None:intergenic
TGCATTGGAAAGTGGGAGAG+AGG 0.485615 5_3:+48982188 Msa0815420:five_prime_UTR
TTTGCGTGTGTGTGTTGGGA+TGG 0.485758 5_3:+48982163 Msa0815420:five_prime_UTR
TTGGTTCACTTTCTTCTGAA+GGG 0.486436 5_3:+48990240 Msa0815420:CDS
GAGCTGATGCAGTAGTATAA+CGG 0.489369 5_3:-48990511 None:intergenic
TTCTCCTTGGAGACGATCCG+TGG 0.491849 5_3:+48990933 Msa0815420:CDS
CACTCCAGCCTGTGGTAAGA+AGG 0.492721 5_3:-48986514 None:intergenic
TGTCTCTATCAGAAAGTGAT+TGG 0.494259 5_3:+48981743 Msa0815420:five_prime_UTR
GGGTTTGGGGAAATTGAGGA+TGG 0.494369 5_3:+48982230 Msa0815420:five_prime_UTR
CCTTCGCAGGTCGATGCCAT+TGG 0.495140 5_3:+48990350 Msa0815420:CDS
TTACGGTGTTCTTTAATCCA+AGG 0.496586 5_3:+48986827 Msa0815420:CDS
AGTGTTTGAATTCTGAGCTA+TGG 0.497953 5_3:+48982742 Msa0815420:CDS
AGCAAAGTTGGATCGAGTCT+TGG 0.498309 5_3:-48989783 None:intergenic
ACAACCAACAGAGAAATTGA+TGG 0.500348 5_3:+48983044 Msa0815420:CDS
CTGCGAAGGTGAATACTTTG+AGG 0.500931 5_3:-48990336 None:intergenic
TGCTGTTGCTGAAGCTGCAT+AGG 0.502485 5_3:-48989945 None:intergenic
ATCAACTGAGGCGGCAAGCT+AGG 0.503838 5_3:-48983083 None:intergenic
TGATCATTTCCAAGCAAAGT+TGG 0.506102 5_3:-48989795 None:intergenic
CCATGGTCGTTTCAATCTAA+GGG 0.508697 5_3:-48989353 None:intergenic
GGTGGCCAAATTCTCATTGG+AGG 0.509028 5_3:+48988711 Msa0815420:CDS
GAATTAAGACCATGGTCTCC+AGG 0.509314 5_3:-48989720 None:intergenic
ACCACAAGGCCAAGGCTTGG+CGG 0.510135 5_3:+48990007 Msa0815420:CDS
TCCGATGAATCTTGCATGCA+AGG 0.510858 5_3:-48990590 None:intergenic
TCACTTTCTTCTGAAGGGAG+TGG 0.511627 5_3:+48990245 Msa0815420:CDS
CAGCAGCAGCCAACATGGCT+TGG 0.511774 5_3:-48989830 None:intergenic
AGGATGGGGACTCTGAGTTA+GGG 0.512453 5_3:+48982246 Msa0815420:five_prime_UTR
AACATCAGGAATGAGTCAGC+AGG 0.513653 5_3:+48982353 Msa0815420:CDS
TCGAGTCTTGGCTGCATCCA+GGG 0.514219 5_3:-48989771 None:intergenic
GCAACCACAAGGCCAAGGCT+TGG 0.515544 5_3:+48990004 Msa0815420:CDS
GATGGAGTGCATTGGAAAGT+GGG 0.516530 5_3:+48982181 Msa0815420:five_prime_UTR
TCCGCCAAGCCTTGGCCTTG+TGG 0.516994 5_3:-48990008 None:intergenic
CTGCTCAAGAACTAATTGCT+AGG 0.517720 5_3:+48983644 Msa0815420:CDS
ACAAAGGATGTTGTTACAGA+TGG 0.518360 5_3:+48989654 Msa0815420:CDS
CTAGCAATTAGTTCTTGAGC+AGG 0.518496 5_3:-48983643 None:intergenic
CCCTCAAGGTCATAGTGAGC+AGG 0.518733 5_3:+48982824 Msa0815420:CDS
CTTGGAATCCCTAATTCCAT+AGG 0.521068 5_3:-48983411 None:intergenic
TCACATGGATCCCATGATGT+TGG 0.521582 5_3:+48982100 Msa0815420:five_prime_UTR
GTATACAAATCAGGTTCAGT+AGG 0.522013 5_3:+48990767 Msa0815420:CDS
ACAGCCACGAGTATCGTTAT+GGG 0.524830 5_3:+48989285 Msa0815420:CDS
TCACCGGGTCAAAACATGCT+TGG 0.525405 5_3:+48990221 Msa0815420:CDS
TTGAAACGACCATGGCATCC+TGG 0.526294 5_3:+48989361 Msa0815420:CDS
TGTTGATTGTATGTTTCACT+TGG 0.526929 5_3:+48981910 Msa0815420:five_prime_UTR
CTCAAAGTATTCACCTTCGC+AGG 0.527782 5_3:+48990337 Msa0815420:CDS
ATTATGAAAGTTGGCTGTGG+TGG 0.529125 5_3:+48989600 Msa0815420:intron
GTGGTAAGAAGGTGTCGTTT+TGG 0.529135 5_3:-48986503 None:intergenic
GGACAGTGGTAGGGAGCAGA+AGG 0.530895 5_3:-48990487 None:intergenic
CCAAGAAAAGAAGAAGTGCC+AGG 0.532299 5_3:-48989379 None:intergenic
TCACTTGAAAGAACTGATGA+TGG 0.534608 5_3:-48986745 None:intergenic
CCTTGTTTGTGCAGGTACAT+GGG 0.538001 5_3:+48988653 Msa0815420:intron
GGATAACGTACCGGAGTCAA+CGG 0.538035 5_3:-48983287 None:intergenic
AAGTGATTGGCCACAAAACA+AGG 0.538773 5_3:+48981756 Msa0815420:five_prime_UTR
GACACCTTCTTACCACAGGC+TGG 0.540257 5_3:+48986510 Msa0815420:CDS
TTGTCCAGAACTTGGACCAA+GGG 0.541296 5_3:-48991392 None:intergenic
CCTGCTCACTATGACCTTGA+GGG 0.546063 5_3:-48982824 None:intergenic
GATGATGGCATAACAGTTTG+TGG 0.546352 5_3:-48986730 None:intergenic
TGCTCAAGAACTAATTGCTA+GGG 0.548822 5_3:+48983645 Msa0815420:CDS
CCTGATTGTTGATAATTGAA+AGG 0.550470 5_3:-48989912 None:intergenic
CAAACCAGCAGCAGCCAACA+TGG 0.552204 5_3:-48989835 None:intergenic
CAACAGCTATCACGAGCTGC+GGG 0.552575 5_3:+48990814 Msa0815420:CDS
AGAAATTTCAACTACTCGTG+TGG 0.553807 5_3:-48991957 None:intergenic
TAAGTGACATGGATCCTGTT+CGG 0.554501 5_3:+48988690 Msa0815420:CDS
GGTTTGGGGAAATTGAGGAT+GGG 0.555254 5_3:+48982231 Msa0815420:five_prime_UTR
GAAACTTCCACTCAACATCA+TGG 0.555525 5_3:-48983672 None:intergenic
AAGATCCTCTTAGATCAGGC+TGG 0.555768 5_3:+48990876 Msa0815420:CDS
TACCATACACGCGTTTCTGT+CGG 0.559073 5_3:+48986986 Msa0815420:CDS
GAGCTATGGCATGCATGTGC+GGG 0.561055 5_3:+48982756 Msa0815420:CDS
TGAGCTATGGCATGCATGTG+CGG 0.562220 5_3:+48982755 Msa0815420:CDS
AATCTAAGGGGAAATAGTGA+TGG 0.562581 5_3:-48989340 None:intergenic
TGACCCTTATGAGCCAAAAG+AGG 0.564460 5_3:-48981936 None:intergenic
TATTCAAGTGAGCCTAATGA+TGG 0.565204 5_3:-48991463 None:intergenic
CTGTTGAATTTATCTAGAAG+TGG 0.565855 5_3:+48990272 Msa0815420:CDS
GTTGGGATGAATCGACAGCT+GGG 0.567928 5_3:+48989257 Msa0815420:CDS
GAAATTTCAACTACTCGTGT+GGG 0.568177 5_3:-48991956 None:intergenic
ACAAATAATAATAGTAAACA+TGG 0.569415 5_3:-48991733 None:intergenic
TCCTTGCATGCAAGATTCAT+CGG 0.569439 5_3:+48990589 Msa0815420:CDS
TTTGTCCAGAACTTGGACCA+AGG 0.569650 5_3:-48991393 None:intergenic
GAAGAAGTGCCAGGATGCCA+TGG 0.571373 5_3:-48989370 None:intergenic
GCAATTAGTTCTTGAGCAGG+AGG 0.571462 5_3:-48983640 None:intergenic
CTCATTATGAAAGTTGGCTG+TGG 0.573398 5_3:+48989597 Msa0815420:intron
ACAGTCACCTCAACAATCAT+GGG 0.573472 5_3:+48990313 Msa0815420:CDS
CTGCTGGTTTGCAGAACCAA+GGG 0.574081 5_3:+48989847 Msa0815420:CDS
GATTGTTGTGCGATTTCTGA+AGG 0.575710 5_3:-48990049 None:intergenic
GACGCTACAGCCGTTGACTC+CGG 0.576927 5_3:+48983277 Msa0815420:CDS
ATGAGTCAGCAGGGTCATGA+AGG 0.577400 5_3:+48982363 Msa0815420:CDS
CCCTTAGATTGAAACGACCA+TGG 0.577662 5_3:+48989353 Msa0815420:CDS
TTTGCTGCTTCGGTTTCACC+GGG 0.578250 5_3:+48990206 Msa0815420:CDS
ATCATGCAACCACAAGGCCA+AGG 0.579461 5_3:+48989999 Msa0815420:CDS
TTAGGGGAGTCTAGTTTCCA+GGG 0.581051 5_3:+48990557 Msa0815420:CDS
CTCAGATGTTTGGAATTGAG+GGG 0.583967 5_3:+48990846 Msa0815420:CDS
TCTCCTTGGAGACGATCCGT+GGG 0.584101 5_3:+48990934 Msa0815420:CDS
GCTTTGATATATTTGGAGAG+TGG 0.585290 5_3:-48986959 None:intergenic
TAACGGCATTGTCGATGCAT+CGG 0.586200 5_3:-48990537 None:intergenic
AGTGGTATGACGAACTCGGA+TGG 0.586811 5_3:-48986941 None:intergenic
ACCACACGAGTCCCTGAAGT+TGG 0.588097 5_3:-48982795 None:intergenic
TGTGTTGGGATGGAGTGCAT+TGG 0.589614 5_3:+48982173 Msa0815420:five_prime_UTR
CGTGTGGTTTACTTCCCTCA+AGG 0.589746 5_3:+48982810 Msa0815420:CDS
CGAGGCGGTCCTGGAGACCA+TGG 0.593160 5_3:+48989711 Msa0815420:CDS
GAAGAAGCCATAGAATCCCT+TGG 0.594811 5_3:+48991376 Msa0815420:CDS
CGGAGTTGTTGCAAAGTGCA+GGG 0.599731 5_3:+48990609 Msa0815420:CDS
ACCTGCTCACTATGACCTTG+AGG 0.599895 5_3:-48982825 None:intergenic
CCAATGGCATCGACCTGCGA+AGG 0.601589 5_3:-48990350 None:intergenic
TCAGCAATACCAAGCCATGT+TGG 0.601794 5_3:+48989821 Msa0815420:CDS
TGGGAATACGTCGTGCCAGT+AGG 0.602014 5_3:+48986707 Msa0815420:CDS
GAAGTCTATACTTACTCCCA+CGG 0.606124 5_3:-48990950 None:intergenic
GGAGAGTGGTATGACGAACT+CGG 0.607144 5_3:-48986945 None:intergenic
ACTCCCACGGATCGTCTCCA+AGG 0.611476 5_3:-48990937 None:intergenic
TGCAAGGATATGGAGAACCC+TGG 0.612109 5_3:-48990574 None:intergenic
AAACGACACCTTCTTACCAC+AGG 0.613976 5_3:+48986506 Msa0815420:CDS
CTGAAGAATCAAGTGTCCGC+AGG 0.618203 5_3:+48987035 Msa0815420:CDS
GGGATCTCCATGATGTTGAG+TGG 0.619633 5_3:+48983665 Msa0815420:CDS
GCTGCTGGTTTGCAGAACCA+AGG 0.621321 5_3:+48989846 Msa0815420:CDS
TATACAAATCAGGTTCAGTA+GGG 0.621544 5_3:+48990768 Msa0815420:CDS
AACAAATACACTCCAGCCTG+TGG 0.623923 5_3:-48986522 None:intergenic
GAGTGTTGCTTCTGATGGAG+CGG 0.624303 5_3:-48990128 None:intergenic
AAGTATTCCTTCAGATCCCA+CGG 0.624705 5_3:+48991502 Msa0815420:three_prime_UTR
TCAAGTGATAGCATGCACAT+TGG 0.626620 5_3:+48986760 Msa0815420:CDS
TAGTATATTCAGAATATGCA+AGG 0.627349 5_3:-48991697 None:intergenic
GCGAGTGATACAAGCACACA+TGG 0.628539 5_3:+48983471 Msa0815420:CDS
ATCACGGACACTACCAATGG+AGG 0.629829 5_3:-48983534 None:intergenic
ACCAACTTCAGGGACTCGTG+TGG 0.631510 5_3:+48982794 Msa0815420:CDS
GTGATACAAGCACACATGGA+GGG 0.632714 5_3:+48983475 Msa0815420:CDS
GGCGCTCACTTGACATCTCG+CGG 0.633721 5_3:+48990789 Msa0815420:CDS
TTGGTCCAAGTTCTGGACAA+AGG 0.633729 5_3:+48991395 Msa0815420:CDS
TCAACAGCTATCACGAGCTG+CGG 0.635957 5_3:+48990813 Msa0815420:CDS
ATGCGACATCGAATTGCCAA+TGG 0.636979 5_3:-48990366 None:intergenic
TGCATCGACAATGCCGTTAG+GGG 0.639311 5_3:+48990541 Msa0815420:CDS
TGGAAACTAGACTCCCCTAA+CGG 0.640862 5_3:-48990554 None:intergenic
CAGCTATCACGAGCTGCGGG+AGG 0.641910 5_3:+48990817 Msa0815420:CDS
TTTGAGGCCCATGATTGTTG+AGG 0.647475 5_3:-48990320 None:intergenic
TGTTACAGATGGCAGAGATG+AGG 0.648397 5_3:+48989665 Msa0815420:CDS
AATTCATGGAATTAAGACCA+TGG 0.648676 5_3:-48989728 None:intergenic
AATAATATCATGCAACCACA+AGG 0.648996 5_3:+48989993 Msa0815420:CDS
ACATCAGGAATGAGTCAGCA+GGG 0.651756 5_3:+48982354 Msa0815420:CDS
GCTGAAGCTGCATAGGACTG+AGG 0.652013 5_3:-48989938 None:intergenic
CATGGTCGTTTCAATCTAAG+GGG 0.661723 5_3:-48989352 None:intergenic
GCAGCTTGTATTTGTCGACA+GGG 0.662044 5_3:+48990898 Msa0815420:CDS
TATAACTAGCATAAGTGACA+TGG 0.663626 5_3:+48988679 Msa0815420:CDS
CCAGACACCGATATTTGTGA+AGG 0.664833 5_3:+48990649 Msa0815420:CDS
ACTTTCTCAGCTGCACGACG+AGG 0.665589 5_3:-48983507 None:intergenic
ACATCAATCGTACAACCACA+TGG 0.667659 5_3:+48990410 Msa0815420:CDS
AGTTGGCATATCAACTGAGG+CGG 0.676478 5_3:-48983092 None:intergenic
TGAATGTAATAATGGGTTTG+GGG 0.677603 5_3:+48982217 Msa0815420:five_prime_UTR
GGACAAAGGATGAACAACGC+TGG 0.681712 5_3:+48991409 Msa0815420:CDS
GAATATGCAAGGTTGATATG+TGG 0.688089 5_3:-48991686 None:intergenic
TGGGCATCTGAGTTGCCATG+TGG 0.688526 5_3:-48990425 None:intergenic
ATTTCCCATAACGATACTCG+TGG 0.689233 5_3:-48989289 None:intergenic
TGAAGTTGGCATATCAACTG+AGG 0.692734 5_3:-48983095 None:intergenic
GTGACATGGATCCTGTTCGG+TGG 0.692792 5_3:+48988693 Msa0815420:CDS
TTGGGATGAATCGACAGCTG+GGG 0.697786 5_3:+48989258 Msa0815420:CDS
GAAGTTGGTAGAGAAACTAA+GGG 0.700437 5_3:-48982780 None:intergenic
AGGCAACTAATGGACTGATG+TGG 0.709934 5_3:+48989685 Msa0815420:CDS
AGTGATACAAGCACACATGG+AGG 0.710783 5_3:+48983474 Msa0815420:CDS
AATGGACTGATGTGGATGCG+AGG 0.730670 5_3:+48989693 Msa0815420:CDS
GCTGATGCAGTAGTATAACG+GGG 0.736278 5_3:-48990509 None:intergenic
CTGATGCAGTAGTATAACGG+GGG 0.742279 5_3:-48990508 None:intergenic
GGACTGATGTGGATGCGAGG+CGG 0.757867 5_3:+48989696 Msa0815420:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!!! ATTTGAATTTGATTTATATT+TGG + chr5_3:48984013-48984032 Msa0815420:intron 10.0%
!!! TTTGAATTTGATTTATATTT+GGG + chr5_3:48984014-48984033 Msa0815420:intron 10.0%
!!! AAATTAAGACAATTTTATAT+TGG + chr5_3:48984090-48984109 Msa0815420:intron 10.0%
!! CAATGAATAAAAAAAATATT+TGG - chr5_3:48985553-48985572 None:intergenic 10.0%
!!! TTTCTTTTTCTTTTTAAATT+AGG + chr5_3:48986365-48986384 Msa0815420:intron 10.0%
!!! TTCTTTTTCTTTTTAAATTA+GGG + chr5_3:48986366-48986385 Msa0815420:intron 10.0%
!! AAGAAAAATGTATAAATAAA+GGG - chr5_3:48987443-48987462 None:intergenic 10.0%
!! TAAGAAAAATGTATAAATAA+AGG - chr5_3:48987444-48987463 None:intergenic 10.0%
!! TATATCATTTAATAGTTATT+TGG + chr5_3:48987512-48987531 Msa0815420:intron 10.0%
!! TAAAATAAAACAATTTCAAA+AGG - chr5_3:48987573-48987592 None:intergenic 10.0%
!!! GTTTTTTATCACTTTTTTTA+AGG + chr5_3:48982022-48982041 Msa0815420:five_prime_UTR 15.0%
!!! ACTTTTTTTAAGGTTTTTTT+TGG + chr5_3:48982032-48982051 Msa0815420:five_prime_UTR 15.0%
!! TTTATAAAGAGGAAAAAAAA+AGG + chr5_3:48982304-48982323 Msa0815420:five_prime_UTR 15.0%
!! ATATATTTCTCTTTCTATTT+GGG + chr5_3:48983594-48983613 Msa0815420:intron 15.0%
!! ATGATAATATATGTGTAAAA+AGG - chr5_3:48984212-48984231 None:intergenic 15.0%
!!! TTAAATGTATCCTTTTTTAT+AGG - chr5_3:48984363-48984382 None:intergenic 15.0%
!!! ATTTTTTTTTTTAACTGCAT+TGG + chr5_3:48985054-48985073 Msa0815420:intron 15.0%
!! ATTATAAATCATTAATAGAC+AGG + chr5_3:48985428-48985447 Msa0815420:intron 15.0%
!!! AATACATTAGCAATTTTAAA+AGG - chr5_3:48987182-48987201 None:intergenic 15.0%
!! ATTTAGTGTTATATTGTATT+GGG - chr5_3:48987378-48987397 None:intergenic 15.0%
!! TATTTAGTGTTATATTGTAT+TGG - chr5_3:48987379-48987398 None:intergenic 15.0%
!! AGAAAAATGTATAAATAAAG+GGG - chr5_3:48987442-48987461 None:intergenic 15.0%
!! AAAATTGTGTCAATTAAATT+GGG + chr5_3:48987479-48987498 Msa0815420:intron 15.0%
!!! TGATTTTTGTTTTGAAAAAT+TGG + chr5_3:48987697-48987716 Msa0815420:intron 15.0%
!!! TTTTTATCACCTTTAAATTT+TGG + chr5_3:48987811-48987830 Msa0815420:intron 15.0%
!!! TTTTATCACCTTTAAATTTT+GGG + chr5_3:48987812-48987831 Msa0815420:intron 15.0%
!!! AATTGTTTTTTTTGGTATTT+CGG - chr5_3:48988122-48988141 None:intergenic 15.0%
!!! ACCAAAAAAAACAATTTTTA+AGG + chr5_3:48988126-48988145 Msa0815420:intron 15.0%
!!! ACCTTAAAAATTGTTTTTTT+TGG - chr5_3:48988130-48988149 None:intergenic 15.0%
!!! TTTATTGGTTAAAATTTATG+TGG + chr5_3:48988242-48988261 Msa0815420:intron 15.0%
!!! TTATTGGTTAAAATTTATGT+GGG + chr5_3:48988243-48988262 Msa0815420:intron 15.0%
!! TGTTAAAAAATGTAAGTAAA+AGG + chr5_3:48988319-48988338 Msa0815420:intron 15.0%
!! GTTAAAAAATGTAAGTAAAA+GGG + chr5_3:48988320-48988339 Msa0815420:intron 15.0%
!! AAAAGTAAACTTAATGAAAA+AGG - chr5_3:48988937-48988956 None:intergenic 15.0%
!! GGTTAATATACAAAAAATAA+GGG - chr5_3:48991067-48991086 None:intergenic 15.0%
!! TGGTTAATATACAAAAAATA+AGG - chr5_3:48991068-48991087 None:intergenic 15.0%
!! ATATTAAGTGTCATATAATA+AGG - chr5_3:48991198-48991217 None:intergenic 15.0%
!! ACAAATAATAATAGTAAACA+TGG - chr5_3:48991736-48991755 None:intergenic 15.0%
!! TTACTATTATTATTTGTATC+AGG + chr5_3:48991739-48991758 Msa0815420:three_prime_UTR 15.0%
!!! TTTTTTAAGGTTTTTTTTGG+TGG + chr5_3:48982035-48982054 Msa0815420:five_prime_UTR 20.0%
!!! TTTTTAAGGTTTTTTTTGGT+GGG + chr5_3:48982036-48982055 Msa0815420:five_prime_UTR 20.0%
!! AAAATTGTGTCTTTATAAAG+AGG + chr5_3:48982293-48982312 Msa0815420:five_prime_UTR 20.0%
!! AAAAAAACATAAGAGAGAAA+AGG - chr5_3:48982397-48982416 None:intergenic 20.0%
!! ATATTGAAGCATAAACAAAA+GGG - chr5_3:48982654-48982673 None:intergenic 20.0%
!! CAAATTATCTCATACAAAAA+AGG - chr5_3:48982688-48982707 None:intergenic 20.0%
!! TAATTTGATGTGTGAAATTA+TGG + chr5_3:48982701-48982720 Msa0815420:intron 20.0%
!! GATATATTTCTCTTTCTATT+TGG + chr5_3:48983593-48983612 Msa0815420:intron 20.0%
!! GTTTAATTAAATGTTAGTTG+AGG + chr5_3:48983926-48983945 Msa0815420:intron 20.0%
!! ATAATATATGTGTAAAAAGG+AGG - chr5_3:48984209-48984228 None:intergenic 20.0%
!! AAAAAAGGATACATTTAACT+TGG + chr5_3:48984365-48984384 Msa0815420:intron 20.0%
!!! ACTTACTATAGTTGTAATTT+TGG - chr5_3:48984461-48984480 None:intergenic 20.0%
!! TGTTAATATCACTTATGTTT+GGG - chr5_3:48984644-48984663 None:intergenic 20.0%
!! ATGTTAATATCACTTATGTT+TGG - chr5_3:48984645-48984664 None:intergenic 20.0%
!! TGTTTATTAACCAAATCAAT+AGG + chr5_3:48984664-48984683 Msa0815420:intron 20.0%
!!! TAAGAAATTAGTGCATATTT+TGG + chr5_3:48984734-48984753 Msa0815420:intron 20.0%
!!! TTTTAGCAAAAACTACTTTT+TGG - chr5_3:48984808-48984827 None:intergenic 20.0%
!! TGAATTATGTGACTATTATT+TGG - chr5_3:48984872-48984891 None:intergenic 20.0%
!! AAATTATTCTGTTAGGAAAT+TGG + chr5_3:48985819-48985838 Msa0815420:intron 20.0%
!!! ACTATCTTGTGTTTTTTATA+TGG - chr5_3:48985893-48985912 None:intergenic 20.0%
!!! TTTTGTTAGAAAACAGATAT+CGG + chr5_3:48986195-48986214 Msa0815420:intron 20.0%
!! CTAAAGTAAATTAAAAACGA+TGG - chr5_3:48986264-48986283 None:intergenic 20.0%
!! AGTATTATTCATAATGACTT+AGG - chr5_3:48986400-48986419 None:intergenic 20.0%
!!! TTATCTGTATTTTCATTGAT+AGG + chr5_3:48986662-48986681 Msa0815420:intron 20.0%
!!! ATTGTAGACATAATTTTGTT+AGG + chr5_3:48987110-48987129 Msa0815420:intron 20.0%
!!! TTTATTGATAACTGGATTTA+TGG + chr5_3:48987249-48987268 Msa0815420:intron 20.0%
!!! GACACTTTTTTTTAGAAAAT+GGG - chr5_3:48987309-48987328 None:intergenic 20.0%
!! GTTGTATTGAAAATTGAAAT+GGG - chr5_3:48987345-48987364 None:intergenic 20.0%
!! AGTTGTATTGAAAATTGAAA+TGG - chr5_3:48987346-48987365 None:intergenic 20.0%
!! AAAGTGGAATATATTGTATT+GGG - chr5_3:48987419-48987438 None:intergenic 20.0%
!! CAAAATTGTGTCAATTAAAT+TGG + chr5_3:48987478-48987497 Msa0815420:intron 20.0%
!! TCATTTAATAGTTATTTGGT+AGG + chr5_3:48987516-48987535 Msa0815420:intron 20.0%
!!! GTAAATTTAACTTGGATTTA+AGG + chr5_3:48987645-48987664 Msa0815420:intron 20.0%
!!! ATTCAAATCCTAAGTTTTTT+TGG - chr5_3:48987980-48987999 None:intergenic 20.0%
!! TGATCCTACTAAATTTATAT+GGG - chr5_3:48988270-48988289 None:intergenic 20.0%
!! TTGATCCTACTAAATTTATA+TGG - chr5_3:48988271-48988290 None:intergenic 20.0%
!! ACAAATAAAAAAGGAAATTG+AGG - chr5_3:48988451-48988470 None:intergenic 20.0%
!! GTCAATTATATGTCAAAAAA+AGG - chr5_3:48988484-48988503 None:intergenic 20.0%
!!! TATTTCAATTAGTCGAATTT+TGG + chr5_3:48988553-48988572 Msa0815420:intron 20.0%
!! CACAATGTAATAGATAAAAT+TGG + chr5_3:48988757-48988776 Msa0815420:intron 20.0%
!!! TATTTTCTTTTTACATAACC+TGG + chr5_3:48989057-48989076 Msa0815420:intron 20.0%
!! AAATCATGTTCAAATTCAAT+AGG + chr5_3:48989093-48989112 Msa0815420:intron 20.0%
!! TTGTATTCCATATATTAGAA+AGG + chr5_3:48989170-48989189 Msa0815420:intron 20.0%
!! ATTAAATGTAGATGAACATA+AGG - chr5_3:48989556-48989575 None:intergenic 20.0%
!!! CATGATATTATTAGTTGATA+CGG - chr5_3:48989985-48990004 None:intergenic 20.0%
!! ATATTATTATTATTACCTGC+CGG + chr5_3:48990684-48990703 Msa0815420:intron 20.0%
!!! TTTAGTTTTATCTTTTTCAC+AGG + chr5_3:48990745-48990764 Msa0815420:intron 20.0%
!!! AGTTTTGACATTTTATTGTT+TGG + chr5_3:48991268-48991287 Msa0815420:intron 20.0%
!! NNNNNNNNNNATTTGACCGT+GGG - chr5_3:48991521-48991540 None:intergenic 20.0%
! AACAAAAACATGAAGAAAAG+TGG - chr5_3:48981888-48981907 None:intergenic 25.0%
!! AAAAACCCTTTTTGTAAAGA+AGG + chr5_3:48981999-48982018 Msa0815420:five_prime_UTR 25.0%
!! AAAACCCTTTTTGTAAAGAA+GGG + chr5_3:48982000-48982019 Msa0815420:five_prime_UTR 25.0%
! AAAACCCTTCTTTACAAAAA+GGG - chr5_3:48982007-48982026 None:intergenic 25.0%
! AAAAACCCTTCTTTACAAAA+AGG - chr5_3:48982008-48982027 None:intergenic 25.0%
!!! TTTTAAGGTTTTTTTTGGTG+GGG + chr5_3:48982037-48982056 Msa0815420:five_prime_UTR 25.0%
!! TGATTTTGTAACTATTCACA+TGG + chr5_3:48982085-48982104 Msa0815420:five_prime_UTR 25.0%
! GTATGAGTGAATGTAATAAT+GGG + chr5_3:48982210-48982229 Msa0815420:five_prime_UTR 25.0%
! CTATACTAAAATTCACTTGA+GGG - chr5_3:48982460-48982479 None:intergenic 25.0%
! TCTATACTAAAATTCACTTG+AGG - chr5_3:48982461-48982480 None:intergenic 25.0%
! TATTGAAGCATAAACAAAAG+GGG - chr5_3:48982653-48982672 None:intergenic 25.0%
! GATATTGAAGCATAAACAAA+AGG - chr5_3:48982655-48982674 None:intergenic 25.0%
! ATGTGTGAAATTATGGTAAT+AGG + chr5_3:48982708-48982727 Msa0815420:intron 25.0%
!! ATAACTTTTCTTGCAAACTT+TGG + chr5_3:48982925-48982944 Msa0815420:intron 25.0%
!!! TTTCTTTTTGTTGTTGCTAT+TGG + chr5_3:48982973-48982992 Msa0815420:intron 25.0%
!! TTTTGCTAAACAATGATTCT+AGG + chr5_3:48983013-48983032 Msa0815420:intron 25.0%
!! TATCCTTTTTATTCTTCGAT+AGG + chr5_3:48983305-48983324 Msa0815420:intron 25.0%
!! GTCTTGCAAAAATAATTTGT+AGG - chr5_3:48983444-48983463 None:intergenic 25.0%
!!! TTATTTTTGCAAGACATTGA+CGG + chr5_3:48983449-48983468 Msa0815420:CDS 25.0%
!!! TGTTTGATTCTAGTTTGATA+TGG + chr5_3:48983571-48983590 Msa0815420:intron 25.0%
! ACAAGATACTGTAACATATA+TGG - chr5_3:48983738-48983757 None:intergenic 25.0%
!! TTTTATAGTTTCACTGTATG+CGG + chr5_3:48983777-48983796 Msa0815420:intron 25.0%
! ATCAAACCGTTATGAAAAAA+TGG + chr5_3:48984562-48984581 Msa0815420:intron 25.0%
! TATGTGACTATTATTTGGAT+TGG - chr5_3:48984867-48984886 None:intergenic 25.0%
!!! TTTTTAACTGCATTGGAAAA+TGG + chr5_3:48985061-48985080 Msa0815420:intron 25.0%
!! AATCAAAGTATTAGGTATGT+GGG - chr5_3:48985637-48985656 None:intergenic 25.0%
! ATACCTAATACTTTGATTGA+GGG + chr5_3:48985639-48985658 Msa0815420:intron 25.0%
!!! TGTTTGCTAAATTTTTCTAC+AGG - chr5_3:48986050-48986069 None:intergenic 25.0%
! AATTTAGCAAACACAACTTA+TGG + chr5_3:48986057-48986076 Msa0815420:intron 25.0%
! ATTTAGCAAACACAACTTAT+GGG + chr5_3:48986058-48986077 Msa0815420:intron 25.0%
!! TTACTTCAAAAAGAAGCTTT+TGG + chr5_3:48986231-48986250 Msa0815420:intron 25.0%
!!! GTTGTGTTTCTGTTTTATAA+TGG - chr5_3:48986331-48986350 None:intergenic 25.0%
!!! GGAATAAAAAGTATTCAGAA+AGG - chr5_3:48986609-48986628 None:intergenic 25.0%
! TTCAGAGAAGAAATAAATGA+TGG - chr5_3:48987070-48987089 None:intergenic 25.0%
! AAAATTGCTAATGTATTGTG+AGG + chr5_3:48987185-48987204 Msa0815420:intron 25.0%
!!! GGACACTTTTTTTTAGAAAA+TGG - chr5_3:48987310-48987329 None:intergenic 25.0%
! GAAAGTGGAATATATTGTAT+TGG - chr5_3:48987420-48987439 None:intergenic 25.0%
! TATTATGAGATTGATTGATG+TGG + chr5_3:48987591-48987610 Msa0815420:intron 25.0%
!!! TGTTTTGAAAAATTGGTATC+CGG + chr5_3:48987704-48987723 Msa0815420:intron 25.0%
!!! CTGTATTACATGTTTTGTTT+GGG + chr5_3:48987932-48987951 Msa0815420:intron 25.0%
! TAGCACTTCTCTTAAAAATT+AGG - chr5_3:48988200-48988219 None:intergenic 25.0%
!! TTTAACACGCTTTCTTTTAT+TGG - chr5_3:48988306-48988325 None:intergenic 25.0%
! TAGTAGAAAAACTAGAGTTA+CGG + chr5_3:48988368-48988387 Msa0815420:intron 25.0%
! ATATTGAAATTTACGTACCA+AGG - chr5_3:48988413-48988432 None:intergenic 25.0%
! ATGCTGCATACAAATAAAAA+AGG - chr5_3:48988460-48988479 None:intergenic 25.0%
! AAGGTTTATTTATCAAAGAC+AGG - chr5_3:48988890-48988909 None:intergenic 25.0%
!!! AGATTTCAAGTGTTTTTGAA+AGG - chr5_3:48988909-48988928 None:intergenic 25.0%
! ACAAATTACAAAAAACCTCA+TGG - chr5_3:48988981-48989000 None:intergenic 25.0%
! TACATTGGAAATGTAGTTAA+AGG - chr5_3:48989319-48989338 None:intergenic 25.0%
! CGTAAAAAAAATTCATGTGA+CGG - chr5_3:48989483-48989502 None:intergenic 25.0%
!! CTTAATTCCATGAATTTTCA+AGG + chr5_3:48989735-48989754 Msa0815420:CDS 25.0%
!!! CAAGATTCAGTTTTAATTCA+AGG + chr5_3:48990101-48990120 Msa0815420:CDS 25.0%
! AATAAGACCTTCACAAATAT+CGG - chr5_3:48990659-48990678 None:intergenic 25.0%
!!! GAACACAAATATTTTGAATG+TGG - chr5_3:48991015-48991034 None:intergenic 25.0%
! CTCTTATTAATAGTAGTTAG+TGG - chr5_3:48991102-48991121 None:intergenic 25.0%
!!! ACATTTTATTGTTTGGTTTG+TGG + chr5_3:48991275-48991294 Msa0815420:intron 25.0%
! GATCATTTGTCAATAATGTT+TGG + chr5_3:48991311-48991330 Msa0815420:intron 25.0%
! TAGTATATTCAGAATATGCA+AGG - chr5_3:48991700-48991719 None:intergenic 25.0%
! AAAAGAAAGACGAAAAACTT+GGG + chr5_3:48991779-48991798 Msa0815420:three_prime_UTR 25.0%
! AATTGTACAGTTAGAAATCT+AGG + chr5_3:48991894-48991913 Msa0815420:three_prime_UTR 25.0%
CTTCTTCAGTTTCATTTCAA+TGG + chr5_3:48981845-48981864 Msa0815420:five_prime_UTR 30.0%
! TGTTGATTGTATGTTTCACT+TGG + chr5_3:48981910-48981929 Msa0815420:five_prime_UTR 30.0%
CCTTAAAAAACCAACATCAT+GGG - chr5_3:48982113-48982132 None:intergenic 30.0%
ACCTTAAAAAACCAACATCA+TGG - chr5_3:48982114-48982133 None:intergenic 30.0%
GGTATGAGTGAATGTAATAA+TGG + chr5_3:48982209-48982228 Msa0815420:five_prime_UTR 30.0%
!! AGTGAATGTAATAATGGGTT+TGG + chr5_3:48982215-48982234 Msa0815420:five_prime_UTR 30.0%
!! GTGAATGTAATAATGGGTTT+GGG + chr5_3:48982216-48982235 Msa0815420:five_prime_UTR 30.0%
!! TGAATGTAATAATGGGTTTG+GGG + chr5_3:48982217-48982236 Msa0815420:five_prime_UTR 30.0%
ATTGAAGCATAAACAAAAGG+GGG - chr5_3:48982652-48982671 None:intergenic 30.0%
TGTGAAATTATGGTAATAGG+AGG + chr5_3:48982711-48982730 Msa0815420:intron 30.0%
GTGAAATTATGGTAATAGGA+GGG + chr5_3:48982712-48982731 Msa0815420:intron 30.0%
TGAAATTATGGTAATAGGAG+GGG + chr5_3:48982713-48982732 Msa0815420:intron 30.0%
AAACAATAAGGAGTTGTAGT+AGG - chr5_3:48982870-48982889 None:intergenic 30.0%
TACACAACACTGAAACAATA+AGG - chr5_3:48982882-48982901 None:intergenic 30.0%
GCATTGTAACATTATGAAGT+TGG - chr5_3:48983112-48983131 None:intergenic 30.0%
! TAGAGCTTGTGTTAATTTTC+AGG + chr5_3:48983220-48983239 Msa0815420:intron 30.0%
GAATAAAAAGGATAACGTAC+CGG - chr5_3:48983299-48983318 None:intergenic 30.0%
CAACCTATCGAAGAATAAAA+AGG - chr5_3:48983311-48983330 None:intergenic 30.0%
CAGAAAGGAAAACAAAATCA+CGG - chr5_3:48983553-48983572 None:intergenic 30.0%
CAAACTAGAATCAAACAGAA+AGG - chr5_3:48983568-48983587 None:intergenic 30.0%
! GGAAGTTTCGACATATTTTT+CGG + chr5_3:48983686-48983705 Msa0815420:CDS 30.0%
! GAAGTTTCGACATATTTTTC+GGG + chr5_3:48983687-48983706 Msa0815420:CDS 30.0%
! AAGTTTCGACATATTTTTCG+GGG + chr5_3:48983688-48983707 Msa0815420:CDS 30.0%
GTTACAGTATCTTGTTAGTT+TGG + chr5_3:48983743-48983762 Msa0815420:intron 30.0%
AAAAACTCACCCATATTATG+TGG + chr5_3:48983825-48983844 Msa0815420:intron 30.0%
AGTTGTTGACCACATAATAT+GGG - chr5_3:48983837-48983856 None:intergenic 30.0%
AAGTTGTTGACCACATAATA+TGG - chr5_3:48983838-48983857 None:intergenic 30.0%
TACTAAATTAATTGCGCATC+AGG - chr5_3:48984131-48984150 None:intergenic 30.0%
TTAGTAAAGTTAGTAGTCAC+TGG + chr5_3:48984145-48984164 Msa0815420:intron 30.0%
GCATACCATTAATGACTTTA+AGG + chr5_3:48984174-48984193 Msa0815420:intron 30.0%
!! CATTAATGACTTTAAGGTCT+GGG + chr5_3:48984180-48984199 Msa0815420:intron 30.0%
!!! CCTTTTTTATAGGCAAAAGT+TGG - chr5_3:48984353-48984372 None:intergenic 30.0%
! CCAACTTTTGCCTATAAAAA+AGG + chr5_3:48984350-48984369 Msa0815420:intron 30.0%
!!! ACTGCACCATTTTTTCATAA+CGG - chr5_3:48984571-48984590 None:intergenic 30.0%
GTACTATTCATGTTTCTCAT+GGG - chr5_3:48984622-48984641 None:intergenic 30.0%
! CCATATTAAGCCTATTGATT+TGG - chr5_3:48984677-48984696 None:intergenic 30.0%
CCAAATCAATAGGCTTAATA+TGG + chr5_3:48984674-48984693 Msa0815420:intron 30.0%
! TTTTGGATTGACAATGAGTT+TGG + chr5_3:48984751-48984770 Msa0815420:intron 30.0%
!! CTTTTTGGAGATGAAAATCA+CGG - chr5_3:48984793-48984812 None:intergenic 30.0%
ATGTGCATTGCATTAACATT+TGG + chr5_3:48985118-48985137 Msa0815420:intron 30.0%
AAATTCCTTAAAACACCATC+AGG + chr5_3:48985252-48985271 Msa0815420:intron 30.0%
! CAATCAAAGTATTAGGTATG+TGG - chr5_3:48985638-48985657 None:intergenic 30.0%
CATACCTAATACTTTGATTG+AGG + chr5_3:48985638-48985657 Msa0815420:intron 30.0%
! TTTTACTACGTGTTTGAAGA+AGG + chr5_3:48985716-48985735 Msa0815420:intron 30.0%
AAACTGAATCCTATCTGATA+TGG + chr5_3:48985762-48985781 Msa0815420:intron 30.0%
! GTTGGTGAAATTATTCTGTT+AGG + chr5_3:48985812-48985831 Msa0815420:intron 30.0%
GGAAATTGGTCATATGTAAA+AGG + chr5_3:48985833-48985852 Msa0815420:intron 30.0%
GTTGAGTTCTATTTCATAGA+AGG + chr5_3:48986004-48986023 Msa0815420:intron 30.0%
CAAATAAAATCTACCAACAC+TGG - chr5_3:48986101-48986120 None:intergenic 30.0%
!!! CAGTGTTGGTAGATTTTATT+TGG + chr5_3:48986099-48986118 Msa0815420:intron 30.0%
!! GATTTTATTTGGTACCTTAG+TGG + chr5_3:48986110-48986129 Msa0815420:intron 30.0%
TAAAACAGAAACACAACACT+AGG + chr5_3:48986334-48986353 Msa0815420:intron 30.0%
TATTGCTTCCTTATCATTTC+AGG + chr5_3:48986476-48986495 Msa0815420:intron 30.0%
!! GAGATTCTGTGCTTTTTATT+TGG + chr5_3:48986567-48986586 Msa0815420:CDS 30.0%
!! TACTTTTTATTCCTCATCGA+TGG + chr5_3:48986616-48986635 Msa0815420:intron 30.0%
! TGAAAAGAATCAGCTTCTTT+TGG + chr5_3:48986687-48986706 Msa0815420:CDS 30.0%
! GAAAAGAATCAGCTTCTTTT+GGG + chr5_3:48986688-48986707 Msa0815420:CDS 30.0%
TTAGAAAACAAACACAACCT+TGG - chr5_3:48986847-48986866 None:intergenic 30.0%
!!! ATCTTTTGAAACCTACATCA+TGG + chr5_3:48986907-48986926 Msa0815420:intron 30.0%
! GTACACAGCTTTGATATATT+TGG - chr5_3:48986969-48986988 None:intergenic 30.0%
! TCTCTGAACGTTTATTGATT+TGG + chr5_3:48987082-48987101 Msa0815420:intron 30.0%
!! TGAAATGGGTCAGTTATTTT+GGG - chr5_3:48987331-48987350 None:intergenic 30.0%
! TTGAAATGGGTCAGTTATTT+TGG - chr5_3:48987332-48987351 None:intergenic 30.0%
TGTATAAATAAAGGGGAAAG+TGG - chr5_3:48987435-48987454 None:intergenic 30.0%
TTGTGTCAATTAAATTGGGA+CGG + chr5_3:48987483-48987502 Msa0815420:intron 30.0%
CACTACATCTATATTCTCTA+AGG + chr5_3:48987620-48987639 Msa0815420:intron 30.0%
! TACATCTATATTCTCTAAGG+TGG + chr5_3:48987623-48987642 Msa0815420:intron 30.0%
CTAAGGTGGTAAATTTAACT+TGG + chr5_3:48987637-48987656 Msa0815420:intron 30.0%
TCTCAGATCCCAAAATTTAA+AGG - chr5_3:48987823-48987842 None:intergenic 30.0%
!!! TTTCTATTTTGACTACCTTC+AGG - chr5_3:48987872-48987891 None:intergenic 30.0%
AAAACATGTAATACAGGCAA+AGG - chr5_3:48987928-48987947 None:intergenic 30.0%
CCAAACAAAACATGTAATAC+AGG - chr5_3:48987934-48987953 None:intergenic 30.0%
!! CCTGTATTACATGTTTTGTT+TGG + chr5_3:48987931-48987950 Msa0815420:intron 30.0%
TTAGTAGCTGTAATTGATAG+TGG + chr5_3:48988000-48988019 Msa0815420:intron 30.0%
! TAGTAGCTGTAATTGATAGT+GGG + chr5_3:48988001-48988020 Msa0815420:intron 30.0%
ATCAAACTAGAATAGTGTTG+TGG - chr5_3:48988050-48988069 None:intergenic 30.0%
CTTAAAAATTAGGTCACGAT+TGG - chr5_3:48988190-48988209 None:intergenic 30.0%
! TCTCTAACACACTCTTTTAT+TGG + chr5_3:48988227-48988246 Msa0815420:intron 30.0%
TATAACTAGCATAAGTGACA+TGG + chr5_3:48988679-48988698 Msa0815420:CDS 30.0%
ACAAAAAACCTCATGGTTTA+AGG - chr5_3:48988974-48988993 None:intergenic 30.0%
!!! GAGGTTTTTTGTAATTTGTC+TGG + chr5_3:48988982-48989001 Msa0815420:intron 30.0%
CTAAGATTACAGAAATATGC+AGG - chr5_3:48989015-48989034 None:intergenic 30.0%
AAATAACTAGTTGATCGAGA+AGG - chr5_3:48989042-48989061 None:intergenic 30.0%
TCCATATATTAGAAAGGTCT+TGG + chr5_3:48989176-48989195 Msa0815420:intron 30.0%
ACCAAGACCTTTCTAATATA+TGG - chr5_3:48989180-48989199 None:intergenic 30.0%
ATGGATGAAACAAGATAAAC+AGG - chr5_3:48989224-48989243 None:intergenic 30.0%
CAATGCAGATAACAGTTAAA+AGG - chr5_3:48989442-48989461 None:intergenic 30.0%
TTTGTCTCCTTTCTTTACAA+AGG + chr5_3:48989638-48989657 Msa0815420:CDS 30.0%
ACAACATCCTTTGTAAAGAA+AGG - chr5_3:48989648-48989667 None:intergenic 30.0%
AATTCATGGAATTAAGACCA+TGG - chr5_3:48989731-48989750 None:intergenic 30.0%
TTAATAGATCTACATTCCCT+TGG - chr5_3:48989866-48989885 None:intergenic 30.0%
AAGGGAATGTAGATCTATTA+AGG + chr5_3:48989865-48989884 Msa0815420:CDS 30.0%
!! CCTGATTGTTGATAATTGAA+AGG - chr5_3:48989915-48989934 None:intergenic 30.0%
CCTTTCAATTATCAACAATC+AGG + chr5_3:48989912-48989931 Msa0815420:CDS 30.0%
AATAATATCATGCAACCACA+AGG + chr5_3:48989993-48990012 Msa0815420:CDS 30.0%
!!! AAATCTGGTTTTGAGTATGA+CGG - chr5_3:48990167-48990186 None:intergenic 30.0%
AAACCAGATTTCATAGATTC+AGG + chr5_3:48990176-48990195 Msa0815420:CDS 30.0%
CTGTTGAATTTATCTAGAAG+TGG + chr5_3:48990272-48990291 Msa0815420:CDS 30.0%
! TTTTCACAGGTATACAAATC+AGG + chr5_3:48990758-48990777 Msa0815420:intron 30.0%
TATACAAATCAGGTTCAGTA+GGG + chr5_3:48990768-48990787 Msa0815420:CDS 30.0%
AGTTAGTGGAATAGTTAGAT+TGG - chr5_3:48991088-48991107 None:intergenic 30.0%
TATGACACTTAATATGAGAC+AGG + chr5_3:48991203-48991222 Msa0815420:intron 30.0%
ATTGACAAATGATCTACAAG+AGG - chr5_3:48991305-48991324 None:intergenic 30.0%
TCCTGAAGATATTCAGAAAA+TGG + chr5_3:48991351-48991370 Msa0815420:CDS 30.0%
CCTGAAGATATTCAGAAAAT+GGG + chr5_3:48991352-48991371 Msa0815420:CDS 30.0%
CAAAAGAAAGACGAAAAACT+TGG + chr5_3:48991778-48991797 Msa0815420:three_prime_UTR 30.0%
AAAGAAAGACGAAAAACTTG+GGG + chr5_3:48991780-48991799 Msa0815420:three_prime_UTR 30.0%
!! TAACACCATATTTCTGCTTT+TGG - chr5_3:48991838-48991857 None:intergenic 30.0%
! GACACAAGTGAGAGATTTTT+GGG - chr5_3:48981727-48981746 None:intergenic 35.0%
! AGACACAAGTGAGAGATTTT+TGG - chr5_3:48981728-48981747 None:intergenic 35.0%
TGTCTCTATCAGAAAGTGAT+TGG + chr5_3:48981743-48981762 Msa0815420:five_prime_UTR 35.0%
!!! GAAGTAAAGTCCTTGTTTTG+TGG - chr5_3:48981769-48981788 None:intergenic 35.0%
! TTTCACTTGGTTTCCTCTTT+TGG + chr5_3:48981923-48981942 Msa0815420:five_prime_UTR 35.0%
!!! TTTCCTCTTTTGGCTCATAA+GGG + chr5_3:48981933-48981952 Msa0815420:five_prime_UTR 35.0%
!!! CCCATGATGTTGGTTTTTTA+AGG + chr5_3:48982110-48982129 Msa0815420:five_prime_UTR 35.0%
!!! TTTTTTTTGCGTGTGTGTGT+TGG + chr5_3:48982158-48982177 Msa0815420:five_prime_UTR 35.0%
!!! TTTTTTTGCGTGTGTGTGTT+GGG + chr5_3:48982159-48982178 Msa0815420:five_prime_UTR 35.0%
GTTATGAAGCTTTCAACATC+AGG + chr5_3:48982339-48982358 Msa0815420:exon 35.0%
CATGTATAAAATTCGCTCGA+GGG - chr5_3:48982489-48982508 None:intergenic 35.0%
ACATGTATAAAATTCGCTCG+AGG - chr5_3:48982490-48982509 None:intergenic 35.0%
AGTGTTTGAATTCTGAGCTA+TGG + chr5_3:48982742-48982761 Msa0815420:CDS 35.0%
!! GAAGTTGGTAGAGAAACTAA+GGG - chr5_3:48982783-48982802 None:intergenic 35.0%
!! TGAAGTTGGTAGAGAAACTA+AGG - chr5_3:48982784-48982803 None:intergenic 35.0%
TTAGTTTCTCTACCAACTTC+AGG + chr5_3:48982783-48982802 Msa0815420:CDS 35.0%
TAGTTTCTCTACCAACTTCA+GGG + chr5_3:48982784-48982803 Msa0815420:CDS 35.0%
GATTGAAAGAGACTCAAATG+TGG + chr5_3:48982947-48982966 Msa0815420:intron 35.0%
! ATCAATTTCTCTGTTGGTTG+TGG - chr5_3:48983045-48983064 None:intergenic 35.0%
ACAACCAACAGAGAAATTGA+TGG + chr5_3:48983044-48983063 Msa0815420:CDS 35.0%
TTGTCCATCAATTTCTCTGT+TGG - chr5_3:48983051-48983070 None:intergenic 35.0%
CTGAATTCATTCACTTCTGT+TGG - chr5_3:48983195-48983214 None:intergenic 35.0%
! TGTTTTCTTCGTGTAATGAG+AGG + chr5_3:48983329-48983348 Msa0815420:intron 35.0%
GAAAGATACGTTTCTTCCTA+TGG + chr5_3:48983395-48983414 Msa0815420:CDS 35.0%
ACGTTTCTTCCTATGGAATT+AGG + chr5_3:48983402-48983421 Msa0815420:CDS 35.0%
CGTTTCTTCCTATGGAATTA+GGG + chr5_3:48983403-48983422 Msa0815420:CDS 35.0%
! TAATTTGTAGGCTGCTTACT+TGG - chr5_3:48983432-48983451 None:intergenic 35.0%
! TGAGAAAGTTTTTCCTCCAT+TGG + chr5_3:48983521-48983540 Msa0815420:CDS 35.0%
TGCTCAAGAACTAATTGCTA+GGG + chr5_3:48983645-48983664 Msa0815420:CDS 35.0%
CCAGACCTTAAAGTCATTAA+TGG - chr5_3:48984182-48984201 None:intergenic 35.0%
!! CCATTAATGACTTTAAGGTC+TGG + chr5_3:48984179-48984198 Msa0815420:intron 35.0%
TATAACTTAGTGTCCCACAT+AGG + chr5_3:48984240-48984259 Msa0815420:intron 35.0%
!! ATAGGCAAAAGTTGGTAAGA+TGG - chr5_3:48984345-48984364 None:intergenic 35.0%
GTCCTTAAAATTGTGACCAT+CGG + chr5_3:48984504-48984523 Msa0815420:intron 35.0%
GGTACTATTCATGTTTCTCA+TGG - chr5_3:48984623-48984642 None:intergenic 35.0%
!! ACGTTAAAAGTACCGTGAAT+TGG - chr5_3:48984918-48984937 None:intergenic 35.0%
! TCACGGTACTTTTAACGTAT+TGG + chr5_3:48984920-48984939 Msa0815420:intron 35.0%
TGCATATTGCTTTCTCTATC+CGG - chr5_3:48984985-48985004 None:intergenic 35.0%
GTTCCAACGCTTATTAAAAG+TGG - chr5_3:48985087-48985106 None:intergenic 35.0%
!! TTTAATAAGCGTTGGAACAC+TGG + chr5_3:48985089-48985108 Msa0815420:intron 35.0%
!! TTAATAAGCGTTGGAACACT+GGG + chr5_3:48985090-48985109 Msa0815420:intron 35.0%
ATGTTAATGCAATGCACATG+TGG - chr5_3:48985117-48985136 None:intergenic 35.0%
! CAACCCTCAATCAAAGTATT+AGG - chr5_3:48985645-48985664 None:intergenic 35.0%
CATTTCACTCCATATCAGAT+AGG - chr5_3:48985774-48985793 None:intergenic 35.0%
CTATCTGATATGGAGTGAAA+TGG + chr5_3:48985772-48985791 Msa0815420:intron 35.0%
ACACAAGATAGTTGAGTTAC+TGG + chr5_3:48985901-48985920 Msa0815420:intron 35.0%
AACACAACTTATGGGTTCAT+CGG + chr5_3:48986066-48986085 Msa0815420:intron 35.0%
CAACTTTGAACCAGGAAAAA+GGG - chr5_3:48986302-48986321 None:intergenic 35.0%
TCACTTGAAAGAACTGATGA+TGG - chr5_3:48986748-48986767 None:intergenic 35.0%
! AGCAACTAATAGCTGCTTTA+CGG + chr5_3:48986810-48986829 Msa0815420:CDS 35.0%
TTACGGTGTTCTTTAATCCA+AGG + chr5_3:48986827-48986846 Msa0815420:CDS 35.0%
GCTTTGATATATTTGGAGAG+TGG - chr5_3:48986962-48986981 None:intergenic 35.0%
ATCTGCCTCTATATTCTCTA+CGG + chr5_3:48987219-48987238 Msa0815420:intron 35.0%
! GAGGCATGTTTATTGATAAC+TGG + chr5_3:48987241-48987260 Msa0815420:intron 35.0%
AGAAAATGGGTCAGTTATTC+CGG - chr5_3:48987296-48987315 None:intergenic 35.0%
ACAAAAATCAAACAGTAGCC+TGG - chr5_3:48987687-48987706 None:intergenic 35.0%
GGGTCCCATATAAATTTAGT+AGG + chr5_3:48988263-48988282 Msa0815420:intron 35.0%
TGACTTATTCAACTGCTATG+CGG + chr5_3:48988500-48988519 Msa0815420:intron 35.0%
ATAGCGTTGTGGAAAACTAA+AGG - chr5_3:48988529-48988548 None:intergenic 35.0%
!! TAACGGATTGCAGAAAATAG+AGG - chr5_3:48988583-48988602 None:intergenic 35.0%
TCCTTCGAAACATAAGACTA+AGG + chr5_3:48988802-48988821 Msa0815420:intron 35.0%
CCTTCGAAACATAAGACTAA+GGG + chr5_3:48988803-48988822 Msa0815420:intron 35.0%
AAGGGAGAATGTTAGTACAA+TGG + chr5_3:48988821-48988840 Msa0815420:intron 35.0%
! AATGGTAACTTTGCTGTCTT+GGG + chr5_3:48988839-48988858 Msa0815420:intron 35.0%
CTCATGGTTTAAGGATGAAA+AGG - chr5_3:48988965-48988984 None:intergenic 35.0%
! CTTTTCATCCTTAAACCATG+AGG + chr5_3:48988963-48988982 Msa0815420:intron 35.0%
! TTTAGTTCACCTTCTTGACT+AGG + chr5_3:48989119-48989138 Msa0815420:intron 35.0%
CCATTAAAACCTAGTCAAGA+AGG - chr5_3:48989131-48989150 None:intergenic 35.0%
!! CCTTCTTGACTAGGTTTTAA+TGG + chr5_3:48989128-48989147 Msa0815420:intron 35.0%
!! GACTAGGTTTTAATGGTTCA+AGG + chr5_3:48989135-48989154 Msa0815420:intron 35.0%
TTGTTTCATCCATTGTGCAT+AGG + chr5_3:48989231-48989250 Msa0815420:intron 35.0%
!! GGAAATAGTGATGGATACAT+TGG - chr5_3:48989334-48989353 None:intergenic 35.0%
AATCTAAGGGGAAATAGTGA+TGG - chr5_3:48989343-48989362 None:intergenic 35.0%
! AATTCAATGCCCTTAGGTTT+TGG - chr5_3:48989532-48989551 None:intergenic 35.0%
TAAGGAAATTCAATGCCCTT+AGG - chr5_3:48989538-48989557 None:intergenic 35.0%
ACAGCCAACTTTCATAATGA+GGG - chr5_3:48989598-48989617 None:intergenic 35.0%
ACAAAGGATGTTGTTACAGA+TGG + chr5_3:48989654-48989673 Msa0815420:CDS 35.0%
TGATCATTTCCAAGCAAAGT+TGG - chr5_3:48989798-48989817 None:intergenic 35.0%
GATAACTTTGTTGCTGTGTT+TGG - chr5_3:48990082-48990101 None:intergenic 35.0%
ATGCCTGAATCTATGAAATC+TGG - chr5_3:48990182-48990201 None:intergenic 35.0%
TTGGTTCACTTTCTTCTGAA+GGG + chr5_3:48990240-48990259 Msa0815420:CDS 35.0%
TACGATTGATGTATCTCTTC+CGG - chr5_3:48990402-48990421 None:intergenic 35.0%
! CCCAAACAGAACAGAATTTT+GGG - chr5_3:48990447-48990466 None:intergenic 35.0%
CCCAAAATTCTGTTCTGTTT+GGG + chr5_3:48990444-48990463 Msa0815420:CDS 35.0%
CCAAAATTCTGTTCTGTTTG+GGG + chr5_3:48990445-48990464 Msa0815420:CDS 35.0%
AAAAGAAAGGCTGAAAAAGC+CGG - chr5_3:48990706-48990725 None:intergenic 35.0%
GTATACAAATCAGGTTCAGT+AGG + chr5_3:48990767-48990786 Msa0815420:CDS 35.0%
TTTGAAGATCCTCTTAGATC+AGG + chr5_3:48990872-48990891 Msa0815420:CDS 35.0%
ACAGGCATATTCTATGCTAT+AGG + chr5_3:48991221-48991240 Msa0815420:intron 35.0%
! CCCATTTTCTGAATATCTTC+AGG - chr5_3:48991355-48991374 None:intergenic 35.0%
TATTCAAGTGAGCCTAATGA+TGG - chr5_3:48991466-48991485 None:intergenic 35.0%
!! GAATATGCAAGGTTGATATG+TGG - chr5_3:48991689-48991708 None:intergenic 35.0%
! AAAAACTTGGGGCAAACTTT+TGG + chr5_3:48991791-48991810 Msa0815420:three_prime_UTR 35.0%
TGGCACACAAGTTTACAAAT+TGG - chr5_3:48991818-48991837 None:intergenic 35.0%
ACTGCTATTGTTGTAGCATT+TGG + chr5_3:48991857-48991876 Msa0815420:three_prime_UTR 35.0%
GAAATTTCAACTACTCGTGT+GGG - chr5_3:48991959-48991978 None:intergenic 35.0%
! AAGTGATTGGCCACAAAACA+AGG + chr5_3:48981756-48981775 Msa0815420:five_prime_UTR 40.0%
!!! GTTTCCTCTTTTGGCTCATA+AGG + chr5_3:48981932-48981951 Msa0815420:five_prime_UTR 40.0%
!! TAATGGGTTTGGGGAAATTG+AGG + chr5_3:48982226-48982245 Msa0815420:five_prime_UTR 40.0%
TGAAGTTGGCATATCAACTG+AGG - chr5_3:48983098-48983117 None:intergenic 40.0%
CTTGGAATCCCTAATTCCAT+AGG - chr5_3:48983414-48983433 None:intergenic 40.0%
AAAATCACGGACACTACCAA+TGG - chr5_3:48983540-48983559 None:intergenic 40.0%
!! TCTTTCTATTTGGGTTGTGC+AGG + chr5_3:48983603-48983622 Msa0815420:intron 40.0%
! CTAGCAATTAGTTCTTGAGC+AGG - chr5_3:48983646-48983665 None:intergenic 40.0%
CTGCTCAAGAACTAATTGCT+AGG + chr5_3:48983644-48983663 Msa0815420:CDS 40.0%
GAAACTTCCACTCAACATCA+TGG - chr5_3:48983675-48983694 None:intergenic 40.0%
!! TTTTGTTGTGTGAAGTGCCA+TGG - chr5_3:48983808-48983827 None:intergenic 40.0%
TATTTGGGTATTCCCATCCT+AGG + chr5_3:48984029-48984048 Msa0815420:intron 40.0%
ATCAAGATCCTACCTAGGAT+GGG - chr5_3:48984044-48984063 None:intergenic 40.0%
TCAAGATCAAGATCCTACCT+AGG - chr5_3:48984049-48984068 None:intergenic 40.0%
TTAATTGCGCATCAGGATTC+TGG - chr5_3:48984124-48984143 None:intergenic 40.0%
TTGGTGAGCTAAGGGATAAA+GGG + chr5_3:48984271-48984290 Msa0815420:intron 40.0%
! AGTTTCCAGGGTTTAAAACC+TGG - chr5_3:48984312-48984331 None:intergenic 40.0%
! CACCGATGGTCACAATTTTA+AGG - chr5_3:48984509-48984528 None:intergenic 40.0%
!! ATTTGGATTGGCAGTGAGTT+TGG - chr5_3:48984855-48984874 None:intergenic 40.0%
!! AATTGGTTTGCAGTTCCCTA+GGG - chr5_3:48984901-48984920 None:intergenic 40.0%
!!! TGGCCACTTTTAATAAGCGT+TGG + chr5_3:48985081-48985100 Msa0815420:intron 40.0%
TTTATAGCCCATTTCCCTCT+TGG + chr5_3:48985175-48985194 Msa0815420:intron 40.0%
CTTGCCAAACTTTCTGATGT+GGG + chr5_3:48985201-48985220 Msa0815420:intron 40.0%
AAGTCCCACATCAGAAAGTT+TGG - chr5_3:48985208-48985227 None:intergenic 40.0%
!! CTGTTCCTGATGGTGTTTTA+AGG - chr5_3:48985260-48985279 None:intergenic 40.0%
! TATGTGGGAGCATACATAGT+TGG - chr5_3:48985622-48985641 None:intergenic 40.0%
! ACCTGGTTTGCAATTCACTT+CGG - chr5_3:48985692-48985711 None:intergenic 40.0%
ACACGTAGTAAAAAGTCACC+TGG - chr5_3:48985709-48985728 None:intergenic 40.0%
! TGGAGTGAAATGGTTCTGTT+CGG + chr5_3:48985782-48985801 Msa0815420:intron 40.0%
GCGAATAATCTCTCAATGTG+AGG + chr5_3:48985953-48985972 Msa0815420:intron 40.0%
AAATCTACCAACACTGGCAA+CGG - chr5_3:48986095-48986114 None:intergenic 40.0%
GACACATAGAAGTTCCACTA+AGG - chr5_3:48986127-48986146 None:intergenic 40.0%
CCAACTTTGAACCAGGAAAA+AGG - chr5_3:48986303-48986322 None:intergenic 40.0%
! CCTTTTTCCTGGTTCAAAGT+TGG + chr5_3:48986300-48986319 Msa0815420:intron 40.0%
TTGGCTGTCCTGAAATGATA+AGG - chr5_3:48986487-48986506 None:intergenic 40.0%
AGTGCAAAAAGACTAGTAGC+TGG + chr5_3:48986545-48986564 Msa0815420:CDS 40.0%
! GATGATGGCATAACAGTTTG+TGG - chr5_3:48986733-48986752 None:intergenic 40.0%
TCAAGTGATAGCATGCACAT+TGG + chr5_3:48986760-48986779 Msa0815420:CDS 40.0%
TTGAAACCTACATCATGGAC+AGG + chr5_3:48986912-48986931 Msa0815420:intron 40.0%
TGAAACCTACATCATGGACA+GGG + chr5_3:48986913-48986932 Msa0815420:intron 40.0%
GAAAATGGGTCAGTTATTCC+GGG - chr5_3:48987295-48987314 None:intergenic 40.0%
TGTCAATTAAATTGGGACGG+AGG + chr5_3:48987486-48987505 Msa0815420:intron 40.0%
GGTCATTAAATAGATCCACC+AGG + chr5_3:48987666-48987685 Msa0815420:intron 40.0%
AAAATCAAACAGTAGCCTGG+TGG - chr5_3:48987684-48987703 None:intergenic 40.0%
!! TAACTAACCAGTAGCCTTGT+GGG - chr5_3:48987760-48987779 None:intergenic 40.0%
! TTAACTAACCAGTAGCCTTG+TGG - chr5_3:48987761-48987780 None:intergenic 40.0%
! AAGGCTACTGGTTAGTTAAC+TGG + chr5_3:48987762-48987781 Msa0815420:intron 40.0%
GGATCTGAGAAGAGCAAAAA+AGG + chr5_3:48987833-48987852 Msa0815420:intron 40.0%
!!! CTATTTTGACTACCTTCAGG+TGG - chr5_3:48987869-48987888 None:intergenic 40.0%
!!! TTTTTTGGAGCCACAGTAAG+AGG - chr5_3:48987965-48987984 None:intergenic 40.0%
CTGTGGCTCCAAAAAAACTT+AGG + chr5_3:48987969-48987988 Msa0815420:intron 40.0%
GAATAGTGTTGTGGTTTCCA+TGG - chr5_3:48988041-48988060 None:intergenic 40.0%
CATTACTCCTACATTCACCT+TGG + chr5_3:48988393-48988412 Msa0815420:intron 40.0%
TTACGTACCAAGGTGAATGT+AGG - chr5_3:48988403-48988422 None:intergenic 40.0%
AAGGAAATTGAGGCAGTACA+TGG - chr5_3:48988441-48988460 None:intergenic 40.0%
TGAAATAGCAGATAGCGTTG+TGG - chr5_3:48988540-48988559 None:intergenic 40.0%
GTGCTGTCAAGTGTCAATAA+CGG - chr5_3:48988600-48988619 None:intergenic 40.0%
TAAGTGACATGGATCCTGTT+CGG + chr5_3:48988690-48988709 Msa0815420:CDS 40.0%
ACAGACCTCCAATGAGAATT+TGG - chr5_3:48988719-48988738 None:intergenic 40.0%
TTCTCATTGGAGGTCTGTTA+AGG + chr5_3:48988721-48988740 Msa0815420:CDS 40.0%
!! CCCTTAGTCTTATGTTTCGA+AGG - chr5_3:48988806-48988825 None:intergenic 40.0%
! CAATGGTAACTTTGCTGTCT+TGG + chr5_3:48988838-48988857 Msa0815420:intron 40.0%
! GATTTGTGTTGCTGTATTCC+AGG - chr5_3:48989078-48989097 None:intergenic 40.0%
TTCATCCATTGTGCATAGGT+TGG + chr5_3:48989235-48989254 Msa0815420:intron 40.0%
ATTTCCCATAACGATACTCG+TGG - chr5_3:48989292-48989311 None:intergenic 40.0%
CATGGTCGTTTCAATCTAAG+GGG - chr5_3:48989355-48989374 None:intergenic 40.0%
CCATGGTCGTTTCAATCTAA+GGG - chr5_3:48989356-48989375 None:intergenic 40.0%
AACTTTCATAATGAGGGGGT+AGG - chr5_3:48989592-48989611 None:intergenic 40.0%
TACCCCCTCATTATGAAAGT+TGG + chr5_3:48989591-48989610 Msa0815420:intron 40.0%
AGCCAACTTTCATAATGAGG+GGG - chr5_3:48989596-48989615 None:intergenic 40.0%
CAGCCAACTTTCATAATGAG+GGG - chr5_3:48989597-48989616 None:intergenic 40.0%
CACAGCCAACTTTCATAATG+AGG - chr5_3:48989599-48989618 None:intergenic 40.0%
CTCATTATGAAAGTTGGCTG+TGG + chr5_3:48989597-48989616 Msa0815420:intron 40.0%
ATTATGAAAGTTGGCTGTGG+TGG + chr5_3:48989600-48989619 Msa0815420:intron 40.0%
!! TCCATGAATTTTCAAGGTGC+TGG + chr5_3:48989741-48989760 Msa0815420:CDS 40.0%
TCCAGCACCTTGAAAATTCA+TGG - chr5_3:48989745-48989764 None:intergenic 40.0%
GATTGTTGTGCGATTTCTGA+AGG - chr5_3:48990052-48990071 None:intergenic 40.0%
!! AACTAGAGTGTTGCTTCTGA+TGG - chr5_3:48990136-48990155 None:intergenic 40.0%
CTTGGTTCACTTTCTTCTGA+AGG + chr5_3:48990239-48990258 Msa0815420:CDS 40.0%
AACAGTCACCTCAACAATCA+TGG + chr5_3:48990312-48990331 Msa0815420:CDS 40.0%
ACAGTCACCTCAACAATCAT+GGG + chr5_3:48990313-48990332 Msa0815420:CDS 40.0%
ACATCAATCGTACAACCACA+TGG + chr5_3:48990410-48990429 Msa0815420:CDS 40.0%
GCCCAAAATTCTGTTCTGTT+TGG + chr5_3:48990443-48990462 Msa0815420:CDS 40.0%
! CCCCAAACAGAACAGAATTT+TGG - chr5_3:48990448-48990467 None:intergenic 40.0%
AGCTGATGCAGTAGTATAAC+GGG - chr5_3:48990513-48990532 None:intergenic 40.0%
GAGCTGATGCAGTAGTATAA+CGG - chr5_3:48990514-48990533 None:intergenic 40.0%
GAATCTTGCATGCAAGGATA+TGG - chr5_3:48990587-48990606 None:intergenic 40.0%
TCCTTGCATGCAAGATTCAT+CGG + chr5_3:48990589-48990608 Msa0815420:CDS 40.0%
! GCTCAGATGTTTGGAATTGA+GGG + chr5_3:48990845-48990864 Msa0815420:CDS 40.0%
! CTCAGATGTTTGGAATTGAG+GGG + chr5_3:48990846-48990865 Msa0815420:CDS 40.0%
GAAGTCTATACTTACTCCCA+CGG - chr5_3:48990953-48990972 None:intergenic 40.0%
TTCATCCTTTGTCCAGAACT+TGG - chr5_3:48991403-48991422 None:intergenic 40.0%
GAATCTCACGACATTGTTTC+TGG + chr5_3:48991436-48991455 Msa0815420:CDS 40.0%
! GTTTCTGGACTACCATCATT+AGG + chr5_3:48991451-48991470 Msa0815420:CDS 40.0%
AAGTATTCCTTCAGATCCCA+CGG + chr5_3:48991502-48991521 Msa0815420:three_prime_UTR 40.0%
GTGTGCCAAAAGCAGAAATA+TGG + chr5_3:48991830-48991849 Msa0815420:three_prime_UTR 40.0%
TGACCCTTATGAGCCAAAAG+AGG - chr5_3:48981939-48981958 None:intergenic 45.0%
TCACATGGATCCCATGATGT+TGG + chr5_3:48982100-48982119 Msa0815420:five_prime_UTR 45.0%
GATGGAGTGCATTGGAAAGT+GGG + chr5_3:48982181-48982200 Msa0815420:five_prime_UTR 45.0%
GGTTTGGGGAAATTGAGGAT+GGG + chr5_3:48982231-48982250 Msa0815420:five_prime_UTR 45.0%
GTTTGGGGAAATTGAGGATG+GGG + chr5_3:48982232-48982251 Msa0815420:five_prime_UTR 45.0%
AACATCAGGAATGAGTCAGC+AGG + chr5_3:48982353-48982372 Msa0815420:CDS 45.0%
ACATCAGGAATGAGTCAGCA+GGG + chr5_3:48982354-48982373 Msa0815420:CDS 45.0%
CCAACAAGGAGCTCAGAATA+GGG - chr5_3:48982547-48982566 None:intergenic 45.0%
CCTATTCTGAGCTCCTTGTT+GGG + chr5_3:48982545-48982564 Msa0815420:intron 45.0%
CTATTCTGAGCTCCTTGTTG+GGG + chr5_3:48982546-48982565 Msa0815420:intron 45.0%
TATTCTGAGCTCCTTGTTGG+GGG + chr5_3:48982547-48982566 Msa0815420:intron 45.0%
AGTTGGCATATCAACTGAGG+CGG - chr5_3:48983095-48983114 None:intergenic 45.0%
AGTGATACAAGCACACATGG+AGG + chr5_3:48983474-48983493 Msa0815420:CDS 45.0%
GTGATACAAGCACACATGGA+GGG + chr5_3:48983475-48983494 Msa0815420:CDS 45.0%
! GCAATTAGTTCTTGAGCAGG+AGG - chr5_3:48983643-48983662 None:intergenic 45.0%
GATCAAGATCCTACCTAGGA+TGG - chr5_3:48984045-48984064 None:intergenic 45.0%
AGTTAGTAGTCACTGGTGTC+TGG + chr5_3:48984152-48984171 Msa0815420:intron 45.0%
! GTTGGTGAGCTAAGGGATAA+AGG + chr5_3:48984270-48984289 Msa0815420:intron 45.0%
TGGTGAGCTAAGGGATAAAG+GGG + chr5_3:48984272-48984291 Msa0815420:intron 45.0%
AGGGATAAAGGGGTTTGAGA+AGG + chr5_3:48984282-48984301 Msa0815420:intron 45.0%
GATAAAGGGGTTTGAGAAGG+AGG + chr5_3:48984285-48984304 Msa0815420:intron 45.0%
!! AGTTGGTAAGATGGTGGCTA+TGG - chr5_3:48984336-48984355 None:intergenic 45.0%
!! GGCAAAAGTTGGTAAGATGG+TGG - chr5_3:48984342-48984361 None:intergenic 45.0%
ATTGTGACCATCGGTGATTG+TGG + chr5_3:48984513-48984532 Msa0815420:intron 45.0%
ATAACAGCCACAATCACCGA+TGG - chr5_3:48984523-48984542 None:intergenic 45.0%
CAATGAGTTTGGCGAAGTCA+CGG + chr5_3:48984762-48984781 Msa0815420:intron 45.0%
ACATAATTCACCACACCCCT+AGG + chr5_3:48984882-48984901 Msa0815420:intron 45.0%
CATAATTCACCACACCCCTA+GGG + chr5_3:48984883-48984902 Msa0815420:intron 45.0%
!! ATTGGTTTGCAGTTCCCTAG+GGG - chr5_3:48984900-48984919 None:intergenic 45.0%
!! GAATTGGTTTGCAGTTCCCT+AGG - chr5_3:48984902-48984921 None:intergenic 45.0%
GGGAACTGCAAACCAATTCA+CGG + chr5_3:48984903-48984922 Msa0815420:intron 45.0%
CAAGCAACCAAGAGGGAAAT+GGG - chr5_3:48985185-48985204 None:intergenic 45.0%
AGTTTGGCAAGCAACCAAGA+GGG - chr5_3:48985192-48985211 None:intergenic 45.0%
AAGTTTGGCAAGCAACCAAG+AGG - chr5_3:48985193-48985212 None:intergenic 45.0%
GCTTGCCAAACTTTCTGATG+TGG + chr5_3:48985200-48985219 Msa0815420:intron 45.0%
CACCATCAGGAACAGAATGT+AGG + chr5_3:48985265-48985284 Msa0815420:intron 45.0%
TGCCTACATTCTGTTCCTGA+TGG - chr5_3:48985270-48985289 None:intergenic 45.0%
ATTCACTTCGGTACGTGGTA+AGG - chr5_3:48985680-48985699 None:intergenic 45.0%
TTGCAATTCACTTCGGTACG+TGG - chr5_3:48985685-48985704 None:intergenic 45.0%
ACCGAAGTGAATTGCAAACC+AGG + chr5_3:48985688-48985707 Msa0815420:intron 45.0%
GTTCTGTTCGGAAAGTCTGT+TGG + chr5_3:48985794-48985813 Msa0815420:intron 45.0%
!! TTACTGGCTTTGCCACTTCT+TGG + chr5_3:48985917-48985936 Msa0815420:intron 45.0%
GTGCAACATTAGCCAAGAAG+TGG - chr5_3:48985932-48985951 None:intergenic 45.0%
! AGTGAGTTTGCCCTTTTTCC+TGG + chr5_3:48986289-48986308 Msa0815420:intron 45.0%
GGAAACACCAACTTTGAACC+AGG - chr5_3:48986310-48986329 None:intergenic 45.0%
!!! GTGGTAAGAAGGTGTCGTTT+TGG - chr5_3:48986506-48986525 None:intergenic 45.0%
AAACGACACCTTCTTACCAC+AGG + chr5_3:48986506-48986525 Msa0815420:CDS 45.0%
AACAAATACACTCCAGCCTG+TGG - chr5_3:48986525-48986544 None:intergenic 45.0%
CATAACAGTTTGTGGCCTAC+TGG - chr5_3:48986725-48986744 None:intergenic 45.0%
ATGATGGCAACAAGTACCTG+CGG - chr5_3:48987054-48987073 None:intergenic 45.0%
TGCCTCTATATTCTCTACGG+AGG + chr5_3:48987222-48987241 Msa0815420:intron 45.0%
TGCCTCCGTAGAGAATATAG+AGG - chr5_3:48987227-48987246 None:intergenic 45.0%
TCCAAGAACCGACTAATCCA+AGG + chr5_3:48987727-48987746 Msa0815420:intron 45.0%
CCAAGAACCGACTAATCCAA+GGG + chr5_3:48987728-48987747 Msa0815420:intron 45.0%
!! GGGTTTTGATGAATCTGCCA+TGG + chr5_3:48988021-48988040 Msa0815420:intron 45.0%
AGAATGCAGTCGCTATTGCT+TGG - chr5_3:48988075-48988094 None:intergenic 45.0%
CAATAGCGACTGCATTCTTC+CGG + chr5_3:48988077-48988096 Msa0815420:intron 45.0%
CTGCATGAACTAGCAGAAAC+CGG - chr5_3:48988099-48988118 None:intergenic 45.0%
GTGGCACATGCATAAGTACA+GGG - chr5_3:48988634-48988653 None:intergenic 45.0%
ATGTACCTGCACAAACAAGG+TGG - chr5_3:48988653-48988672 None:intergenic 45.0%
! ACCTTGTTTGTGCAGGTACA+TGG + chr5_3:48988652-48988671 Msa0815420:intron 45.0%
! CCTTGTTTGTGCAGGTACAT+GGG + chr5_3:48988653-48988672 Msa0815420:intron 45.0%
TTCGGTGGCCAAATTCTCAT+TGG + chr5_3:48988708-48988727 Msa0815420:CDS 45.0%
! TTTGAGCTCTAGTCATGACG+TGG + chr5_3:48988864-48988883 Msa0815420:intron 45.0%
!! TCCATTGTGCATAGGTTGGT+TGG + chr5_3:48989239-48989258 Msa0815420:intron 45.0%
!! CCATTGTGCATAGGTTGGTT+GGG + chr5_3:48989240-48989259 Msa0815420:intron 45.0%
! ACAGCCACGAGTATCGTTAT+GGG + chr5_3:48989285-48989304 Msa0815420:CDS 45.0%
CCCTTAGATTGAAACGACCA+TGG + chr5_3:48989353-48989372 Msa0815420:CDS 45.0%
GCCATGGTCGTTTCAATCTA+AGG - chr5_3:48989357-48989376 None:intergenic 45.0%
!! CCAAGAAAAGAAGAAGTGCC+AGG - chr5_3:48989382-48989401 None:intergenic 45.0%
! CCTGGCACTTCTTCTTTTCT+TGG + chr5_3:48989379-48989398 Msa0815420:CDS 45.0%
!!! TAGGTTTTGGACACAGCGAA+AGG - chr5_3:48989519-48989538 None:intergenic 45.0%
TTCGCTGTGTCCAAAACCTA+AGG + chr5_3:48989519-48989538 Msa0815420:intron 45.0%
TCGCTGTGTCCAAAACCTAA+GGG + chr5_3:48989520-48989539 Msa0815420:intron 45.0%
TGTTACAGATGGCAGAGATG+AGG + chr5_3:48989665-48989684 Msa0815420:CDS 45.0%
!! AGGCAACTAATGGACTGATG+TGG + chr5_3:48989685-48989704 Msa0815420:CDS 45.0%
GAATTAAGACCATGGTCTCC+AGG - chr5_3:48989723-48989742 None:intergenic 45.0%
AGCAAAGTTGGATCGAGTCT+TGG - chr5_3:48989786-48989805 None:intergenic 45.0%
AGACTCGATCCAACTTTGCT+TGG + chr5_3:48989786-48989805 Msa0815420:CDS 45.0%
TCAGCAATACCAAGCCATGT+TGG + chr5_3:48989821-48989840 Msa0815420:CDS 45.0%
!!! GGTTTTGAGTATGACGGTGA+AGG - chr5_3:48990161-48990180 None:intergenic 45.0%
!! AGGCATGAAGTTTGCTGCTT+CGG + chr5_3:48990196-48990215 Msa0815420:CDS 45.0%
!!! GAACCAAGCATGTTTTGACC+CGG - chr5_3:48990227-48990246 None:intergenic 45.0%
! TCACTTTCTTCTGAAGGGAG+TGG + chr5_3:48990245-48990264 Msa0815420:CDS 45.0%
! TTTGAGGCCCATGATTGTTG+AGG - chr5_3:48990323-48990342 None:intergenic 45.0%
CTGCGAAGGTGAATACTTTG+AGG - chr5_3:48990339-48990358 None:intergenic 45.0%
! CTCAAAGTATTCACCTTCGC+AGG + chr5_3:48990337-48990356 Msa0815420:CDS 45.0%
ATGCGACATCGAATTGCCAA+TGG - chr5_3:48990369-48990388 None:intergenic 45.0%
ATGTCGCATGTGCAGTATTC+CGG + chr5_3:48990380-48990399 Msa0815420:CDS 45.0%
CTGATGCAGTAGTATAACGG+GGG - chr5_3:48990511-48990530 None:intergenic 45.0%
GCTGATGCAGTAGTATAACG+GGG - chr5_3:48990512-48990531 None:intergenic 45.0%
TAACGGCATTGTCGATGCAT+CGG - chr5_3:48990540-48990559 None:intergenic 45.0%
! ATGCATCGACAATGCCGTTA+GGG + chr5_3:48990540-48990559 Msa0815420:CDS 45.0%
TGGAAACTAGACTCCCCTAA+CGG - chr5_3:48990557-48990576 None:intergenic 45.0%
! TTAGGGGAGTCTAGTTTCCA+GGG + chr5_3:48990557-48990576 Msa0815420:CDS 45.0%
TCCGATGAATCTTGCATGCA+AGG - chr5_3:48990593-48990612 None:intergenic 45.0%
! CCTTCACAAATATCGGTGTC+TGG - chr5_3:48990652-48990671 None:intergenic 45.0%
CCAGACACCGATATTTGTGA+AGG + chr5_3:48990649-48990668 Msa0815420:CDS 45.0%
! GGCTCAGATGTTTGGAATTG+AGG + chr5_3:48990844-48990863 Msa0815420:CDS 45.0%
AAGATCCTCTTAGATCAGGC+TGG + chr5_3:48990876-48990895 Msa0815420:CDS 45.0%
GCAGCTTGTATTTGTCGACA+GGG + chr5_3:48990898-48990917 Msa0815420:CDS 45.0%
GAGAACGATGTTCTTCTCCT+TGG + chr5_3:48990920-48990939 Msa0815420:CDS 45.0%
TGGCACTTAATACGAGACAG+AGG - chr5_3:48990995-48991014 None:intergenic 45.0%
GAAGAAGCCATAGAATCCCT+TGG + chr5_3:48991376-48991395 Msa0815420:CDS 45.0%
ACTTGGACCAAGGGATTCTA+TGG - chr5_3:48991386-48991405 None:intergenic 45.0%
TTGTCCAGAACTTGGACCAA+GGG - chr5_3:48991395-48991414 None:intergenic 45.0%
TTTGTCCAGAACTTGGACCA+AGG - chr5_3:48991396-48991415 None:intergenic 45.0%
!! TTGGTCCAAGTTCTGGACAA+AGG + chr5_3:48991395-48991414 Msa0815420:CDS 45.0%
!!! ATTAATTTTAAATAAAAGAA+AGG - chr5_3:48990719-48990738 None:intergenic 5.0%
TTTGCGTGTGTGTGTTGGGA+TGG + chr5_3:48982163-48982182 Msa0815420:five_prime_UTR 50.0%
TGTGTTGGGATGGAGTGCAT+TGG + chr5_3:48982173-48982192 Msa0815420:five_prime_UTR 50.0%
GGATGGAGTGCATTGGAAAG+TGG + chr5_3:48982180-48982199 Msa0815420:five_prime_UTR 50.0%
TGCATTGGAAAGTGGGAGAG+AGG + chr5_3:48982188-48982207 Msa0815420:five_prime_UTR 50.0%
GGGTTTGGGGAAATTGAGGA+TGG + chr5_3:48982230-48982249 Msa0815420:five_prime_UTR 50.0%
AGGATGGGGACTCTGAGTTA+GGG + chr5_3:48982246-48982265 Msa0815420:five_prime_UTR 50.0%
ATGAGTCAGCAGGGTCATGA+AGG + chr5_3:48982363-48982382 Msa0815420:CDS 50.0%
CCCTATTCTGAGCTCCTTGT+TGG + chr5_3:48982544-48982563 Msa0815420:intron 50.0%
CCCAACAAGGAGCTCAGAAT+AGG - chr5_3:48982548-48982567 None:intergenic 50.0%
ATTCTGAGCTCCTTGTTGGG+GGG + chr5_3:48982548-48982567 Msa0815420:intron 50.0%
TGAGCTATGGCATGCATGTG+CGG + chr5_3:48982755-48982774 Msa0815420:CDS 50.0%
CGTGTGGTTTACTTCCCTCA+AGG + chr5_3:48982810-48982829 Msa0815420:CDS 50.0%
CCTGCTCACTATGACCTTGA+GGG - chr5_3:48982827-48982846 None:intergenic 50.0%
ACCTGCTCACTATGACCTTG+AGG - chr5_3:48982828-48982847 None:intergenic 50.0%
GGCGGCAAGCTAGGATAATT+CGG - chr5_3:48983077-48983096 None:intergenic 50.0%
GGATAACGTACCGGAGTCAA+CGG - chr5_3:48983290-48983309 None:intergenic 50.0%
GCGAGTGATACAAGCACACA+TGG + chr5_3:48983471-48983490 Msa0815420:CDS 50.0%
ATCACGGACACTACCAATGG+AGG - chr5_3:48983537-48983556 None:intergenic 50.0%
GGGATCTCCATGATGTTGAG+TGG + chr5_3:48983665-48983684 Msa0815420:CDS 50.0%
CACTGTATGCGGACTTTCCA+TGG + chr5_3:48983788-48983807 Msa0815420:intron 50.0%
TGGGTATTCCCATCCTAGGT+AGG + chr5_3:48984033-48984052 Msa0815420:intron 50.0%
AGTGTCCCACATAGGTCACT+CGG + chr5_3:48984248-48984267 Msa0815420:intron 50.0%
ACCAACCGAGTGACCTATGT+GGG - chr5_3:48984256-48984275 None:intergenic 50.0%
!! TCACTCGGTTGGTGAGCTAA+GGG + chr5_3:48984263-48984282 Msa0815420:intron 50.0%
!!! GAGGTCCAGGTTTTAAACCC+TGG + chr5_3:48984304-48984323 Msa0815420:intron 50.0%
GGTGGCTATGGTAGTTTCCA+GGG - chr5_3:48984324-48984343 None:intergenic 50.0%
TGGTGGCTATGGTAGTTTCC+AGG - chr5_3:48984325-48984344 None:intergenic 50.0%
GTTCACACAAAACCGAGCAC+CGG + chr5_3:48984963-48984982 Msa0815420:intron 50.0%
TGCTTTCTCTATCCGGTGCT+CGG - chr5_3:48984978-48984997 None:intergenic 50.0%
GCAAGCAACCAAGAGGGAAA+TGG - chr5_3:48985186-48985205 None:intergenic 50.0%
AGCAGTTTGCACCATCGATG+AGG - chr5_3:48986630-48986649 None:intergenic 50.0%
ACTAGCCCTGTCCATGATGT+AGG - chr5_3:48986921-48986940 None:intergenic 50.0%
AGTGGTATGACGAACTCGGA+TGG - chr5_3:48986944-48986963 None:intergenic 50.0%
GGAGAGTGGTATGACGAACT+CGG - chr5_3:48986948-48986967 None:intergenic 50.0%
CTGAAGAATCAAGTGTCCGC+AGG + chr5_3:48987035-48987054 Msa0815420:CDS 50.0%
! ATAAAGTACTCCCTCCGTCC+CGG + chr5_3:48987274-48987293 Msa0815420:intron 50.0%
ATGGGTCAGTTATTCCGGGA+CGG - chr5_3:48987291-48987310 None:intergenic 50.0%
!! GGATTAGTCGGTTCTTGGAC+CGG - chr5_3:48987726-48987745 None:intergenic 50.0%
!! CCCTTGGATTAGTCGGTTCT+TGG - chr5_3:48987731-48987750 None:intergenic 50.0%
!! GATCGGTCCCTTGGATTAGT+CGG - chr5_3:48987738-48987757 None:intergenic 50.0%
!! AACCAGTAGCCTTGTGGGAT+CGG - chr5_3:48987755-48987774 None:intergenic 50.0%
GGTTAGCAGTTACCACCTGA+AGG + chr5_3:48987854-48987873 Msa0815420:intron 50.0%
GACAATGGCACTTAGCAGGT+TGG - chr5_3:48987895-48987914 None:intergenic 50.0%
ACGAGACAATGGCACTTAGC+AGG - chr5_3:48987899-48987918 None:intergenic 50.0%
! AAAGGCGCAGTACGAGACAA+TGG - chr5_3:48987910-48987929 None:intergenic 50.0%
GGTGGCACATGCATAAGTAC+AGG - chr5_3:48988635-48988654 None:intergenic 50.0%
! ATGTGCCACCTTGTTTGTGC+AGG + chr5_3:48988645-48988664 Msa0815420:intron 50.0%
CCCATGTACCTGCACAAACA+AGG - chr5_3:48988656-48988675 None:intergenic 50.0%
TGAGAATTTGGCCACCGAAC+AGG - chr5_3:48988707-48988726 None:intergenic 50.0%
GGTGGCCAAATTCTCATTGG+AGG + chr5_3:48988711-48988730 Msa0815420:CDS 50.0%
CCCAACCAACCTATGCACAA+TGG - chr5_3:48989243-48989262 None:intergenic 50.0%
GTTGGGATGAATCGACAGCT+GGG + chr5_3:48989257-48989276 Msa0815420:CDS 50.0%
TTGGGATGAATCGACAGCTG+GGG + chr5_3:48989258-48989277 Msa0815420:CDS 50.0%
! GACAGCCACGAGTATCGTTA+TGG + chr5_3:48989284-48989303 Msa0815420:CDS 50.0%
TTGAAACGACCATGGCATCC+TGG + chr5_3:48989361-48989380 Msa0815420:CDS 50.0%
!! GTTTTGGACACAGCGAAAGG+AGG - chr5_3:48989516-48989535 None:intergenic 50.0%
!! AGTTGGCTGTGGTGGTTTTG+AGG + chr5_3:48989608-48989627 Msa0815420:intron 50.0%
GGCAGAGATGAGGCAACTAA+TGG + chr5_3:48989675-48989694 Msa0815420:CDS 50.0%
!! AATGGACTGATGTGGATGCG+AGG + chr5_3:48989693-48989712 Msa0815420:CDS 50.0%
!! CTGCTGGTTTGCAGAACCAA+GGG + chr5_3:48989847-48989866 Msa0815420:CDS 50.0%
TGCTGTTGCTGAAGCTGCAT+AGG - chr5_3:48989948-48989967 None:intergenic 50.0%
ATCATGCAACCACAAGGCCA+AGG + chr5_3:48989999-48990018 Msa0815420:CDS 50.0%
AAAGATTCTCCGCCAAGCCT+TGG - chr5_3:48990019-48990038 None:intergenic 50.0%
!! GAGTGTTGCTTCTGATGGAG+CGG - chr5_3:48990131-48990150 None:intergenic 50.0%
! GTTTGCTGCTTCGGTTTCAC+CGG + chr5_3:48990205-48990224 Msa0815420:CDS 50.0%
! TTTGCTGCTTCGGTTTCACC+GGG + chr5_3:48990206-48990225 Msa0815420:CDS 50.0%
TCACCGGGTCAAAACATGCT+TGG + chr5_3:48990221-48990240 Msa0815420:CDS 50.0%
!! GGGGTCAATATCGATTCGTC+TGG + chr5_3:48990464-48990483 Msa0815420:CDS 50.0%
! TATAACGGGGGACAGTGGTA+GGG - chr5_3:48990499-48990518 None:intergenic 50.0%
! AGTAGTATAACGGGGGACAG+TGG - chr5_3:48990504-48990523 None:intergenic 50.0%
! GATGCATCGACAATGCCGTT+AGG + chr5_3:48990539-48990558 Msa0815420:CDS 50.0%
! TGCATCGACAATGCCGTTAG+GGG + chr5_3:48990541-48990560 Msa0815420:CDS 50.0%
! GTTAGGGGAGTCTAGTTTCC+AGG + chr5_3:48990556-48990575 Msa0815420:CDS 50.0%
TGCAAGGATATGGAGAACCC+TGG - chr5_3:48990577-48990596 None:intergenic 50.0%
TCGGAGTTGTTGCAAAGTGC+AGG + chr5_3:48990608-48990627 Msa0815420:CDS 50.0%
CGGAGTTGTTGCAAAGTGCA+GGG + chr5_3:48990609-48990628 Msa0815420:CDS 50.0%
TCAACAGCTATCACGAGCTG+CGG + chr5_3:48990813-48990832 Msa0815420:CDS 50.0%
! GAGGAGTTGGCTCAGATGTT+TGG + chr5_3:48990836-48990855 Msa0815420:CDS 50.0%
GGCAGCTTGTATTTGTCGAC+AGG + chr5_3:48990897-48990916 Msa0815420:CDS 50.0%
GAATCCCTTGGTCCAAGTTC+TGG + chr5_3:48991388-48991407 Msa0815420:CDS 50.0%
GGACAAAGGATGAACAACGC+TGG + chr5_3:48991409-48991428 Msa0815420:CDS 50.0%
GAGGATGGGGACTCTGAGTT+AGG + chr5_3:48982245-48982264 Msa0815420:five_prime_UTR 55.0%
TTCTGAGCTCCTTGTTGGGG+GGG + chr5_3:48982549-48982568 Msa0815420:intron 55.0%
GAGCTATGGCATGCATGTGC+GGG + chr5_3:48982756-48982775 Msa0815420:CDS 55.0%
ACCAACTTCAGGGACTCGTG+TGG + chr5_3:48982794-48982813 Msa0815420:CDS 55.0%
ACCACACGAGTCCCTGAAGT+TGG - chr5_3:48982798-48982817 None:intergenic 55.0%
CCCTCAAGGTCATAGTGAGC+AGG + chr5_3:48982824-48982843 Msa0815420:CDS 55.0%
ATCAACTGAGGCGGCAAGCT+AGG - chr5_3:48983086-48983105 None:intergenic 55.0%
ACTTTCTCAGCTGCACGACG+AGG - chr5_3:48983510-48983529 None:intergenic 55.0%
TCCCACATAGGTCACTCGGT+TGG + chr5_3:48984252-48984271 Msa0815420:intron 55.0%
CACCAACCGAGTGACCTATG+TGG - chr5_3:48984257-48984276 None:intergenic 55.0%
!! GTCACTCGGTTGGTGAGCTA+AGG + chr5_3:48984262-48984281 Msa0815420:intron 55.0%
GAGTTTGGCAGGATCGCAGT+GGG - chr5_3:48984840-48984859 None:intergenic 55.0%
TGAGTTTGGCAGGATCGCAG+TGG - chr5_3:48984841-48984860 None:intergenic 55.0%
! GGATTGGCAGTGAGTTTGGC+AGG - chr5_3:48984851-48984870 None:intergenic 55.0%
TTTGCAGTTCCCTAGGGGTG+TGG - chr5_3:48984895-48984914 None:intergenic 55.0%
GACACCTTCTTACCACAGGC+TGG + chr5_3:48986510-48986529 Msa0815420:CDS 55.0%
CACTCCAGCCTGTGGTAAGA+AGG - chr5_3:48986517-48986536 None:intergenic 55.0%
TGGGAATACGTCGTGCCAGT+AGG + chr5_3:48986707-48986726 Msa0815420:CDS 55.0%
GTCAGTTATTCCGGGACGGA+GGG - chr5_3:48987287-48987306 None:intergenic 55.0%
GTGACATGGATCCTGTTCGG+TGG + chr5_3:48988693-48988712 Msa0815420:CDS 55.0%
GGTTGGGATGAATCGACAGC+TGG + chr5_3:48989256-48989275 Msa0815420:CDS 55.0%
!! GAAGAAGTGCCAGGATGCCA+TGG - chr5_3:48989373-48989392 None:intergenic 55.0%
TGAGGGGGTAGGAGACACTA+GGG - chr5_3:48989581-48989600 None:intergenic 55.0%
ATGAGGGGGTAGGAGACACT+AGG - chr5_3:48989582-48989601 None:intergenic 55.0%
!! AAGGTGCTGGATTGTTGCCC+TGG + chr5_3:48989754-48989773 Msa0815420:CDS 55.0%
TCGAGTCTTGGCTGCATCCA+GGG - chr5_3:48989774-48989793 None:intergenic 55.0%
ATCGAGTCTTGGCTGCATCC+AGG - chr5_3:48989775-48989794 None:intergenic 55.0%
CAAACCAGCAGCAGCCAACA+TGG - chr5_3:48989838-48989857 None:intergenic 55.0%
!! GCTGCTGGTTTGCAGAACCA+AGG + chr5_3:48989846-48989865 Msa0815420:CDS 55.0%
GCTGAAGCTGCATAGGACTG+AGG - chr5_3:48989941-48989960 None:intergenic 55.0%
TGGGCATCTGAGTTGCCATG+TGG - chr5_3:48990428-48990447 None:intergenic 55.0%
! GTATAACGGGGGACAGTGGT+AGG - chr5_3:48990500-48990519 None:intergenic 55.0%
GAAAGGCTGAAAAAGCCGGC+AGG - chr5_3:48990702-48990721 None:intergenic 55.0%
CAACAGCTATCACGAGCTGC+GGG + chr5_3:48990814-48990833 Msa0815420:CDS 55.0%
AGCTGCCAGCCTGATCTAAG+AGG - chr5_3:48990884-48990903 None:intergenic 55.0%
TTCTCCTTGGAGACGATCCG+TGG + chr5_3:48990933-48990952 Msa0815420:CDS 55.0%
TCTCCTTGGAGACGATCCGT+GGG + chr5_3:48990934-48990953 Msa0815420:CDS 55.0%
TACAGCAGACCCCCCCAACA+AGG - chr5_3:48982561-48982580 None:intergenic 60.0%
!! GACGCTACAGCCGTTGACTC+CGG + chr5_3:48983277-48983296 Msa0815420:CDS 60.0%
GCGCATCAGGATTCTGGCGA+AGG - chr5_3:48984118-48984137 None:intergenic 60.0%
GGGGTTTGAGAAGGAGGTCC+AGG + chr5_3:48984291-48984310 Msa0815420:intron 60.0%
TCGGTCTCCGTTGCCAGTGT+TGG + chr5_3:48986085-48986104 Msa0815420:intron 60.0%
GGTCAGTTATTCCGGGACGG+AGG - chr5_3:48987288-48987307 None:intergenic 60.0%
TCCAAGGGACCGATCCCACA+AGG + chr5_3:48987743-48987762 Msa0815420:intron 60.0%
GACCGATCCCACAAGGCTAC+TGG + chr5_3:48987750-48987769 Msa0815420:intron 60.0%
GGGATGCGAGCCTCTTACTG+TGG + chr5_3:48987952-48987971 Msa0815420:intron 60.0%
GGACTGATGTGGATGCGAGG+CGG + chr5_3:48989696-48989715 Msa0815420:CDS 60.0%
CAGCAGCAGCCAACATGGCT+TGG - chr5_3:48989833-48989852 None:intergenic 60.0%
! CAAGCCATGTTGGCTGCTGC+TGG + chr5_3:48989831-48989850 Msa0815420:CDS 60.0%
GCAACCACAAGGCCAAGGCT+TGG + chr5_3:48990004-48990023 Msa0815420:CDS 60.0%
ACCACAAGGCCAAGGCTTGG+CGG + chr5_3:48990007-48990026 Msa0815420:CDS 60.0%
!! CCAATGGCATCGACCTGCGA+AGG - chr5_3:48990353-48990372 None:intergenic 60.0%
CCTTCGCAGGTCGATGCCAT+TGG + chr5_3:48990350-48990369 Msa0815420:CDS 60.0%
GGACAGTGGTAGGGAGCAGA+AGG - chr5_3:48990490-48990509 None:intergenic 60.0%
GGCGCTCACTTGACATCTCG+CGG + chr5_3:48990789-48990808 Msa0815420:CDS 60.0%
ACTCCCACGGATCGTCTCCA+AGG - chr5_3:48990940-48990959 None:intergenic 60.0%
GCCTTGTGGGATCGGTCCCT+TGG - chr5_3:48987747-48987766 None:intergenic 65.0%
ATGTGGATGCGAGGCGGTCC+TGG + chr5_3:48989702-48989721 Msa0815420:CDS 65.0%
!! TCCGCCAAGCCTTGGCCTTG+TGG - chr5_3:48990011-48990030 None:intergenic 65.0%
CAGCTATCACGAGCTGCGGG+AGG + chr5_3:48990817-48990836 Msa0815420:CDS 65.0%
TCACGAGCTGCGGGAGGAGT+TGG + chr5_3:48990823-48990842 Msa0815420:CDS 65.0%
CGAGGCGGTCCTGGAGACCA+TGG + chr5_3:48989711-48989730 Msa0815420:CDS 70.0%
Chromosome Type Strat End Strand Name
chr5_3 gene 48981708 48991978 48981708 ID=Msa0815420;Name=Msa0815420
chr5_3 mRNA 48981708 48991978 48981708 ID=Msa0815420-mRNA-1;Parent=Msa0815420;Name=Msa0815420-mRNA-1;_AED=0.06;_eAED=0.06;_QI=634|0.92|0.93|1|0.92|0.86|15|389|862
chr5_3 exon 48981708 48982384 48981708 ID=Msa0815420-mRNA-1:exon:14690;Parent=Msa0815420-mRNA-1
chr5_3 exon 48982730 48982845 48982730 ID=Msa0815420-mRNA-1:exon:14691;Parent=Msa0815420-mRNA-1
chr5_3 exon 48983035 48983133 48983035 ID=Msa0815420-mRNA-1:exon:14692;Parent=Msa0815420-mRNA-1
chr5_3 exon 48983242 48983298 48983242 ID=Msa0815420-mRNA-1:exon:14693;Parent=Msa0815420-mRNA-1
chr5_3 exon 48983387 48983542 48983387 ID=Msa0815420-mRNA-1:exon:14694;Parent=Msa0815420-mRNA-1
chr5_3 exon 48983625 48983709 48983625 ID=Msa0815420-mRNA-1:exon:14695;Parent=Msa0815420-mRNA-1
chr5_3 exon 48986498 48986588 48986498 ID=Msa0815420-mRNA-1:exon:14696;Parent=Msa0815420-mRNA-1
chr5_3 exon 48986684 48986848 48986684 ID=Msa0815420-mRNA-1:exon:14697;Parent=Msa0815420-mRNA-1
chr5_3 exon 48986934 48987056 48986934 ID=Msa0815420-mRNA-1:exon:14698;Parent=Msa0815420-mRNA-1
chr5_3 exon 48988667 48988742 48988667 ID=Msa0815420-mRNA-1:exon:14699;Parent=Msa0815420-mRNA-1
chr5_3 exon 48989253 48989400 48989253 ID=Msa0815420-mRNA-1:exon:14700;Parent=Msa0815420-mRNA-1
chr5_3 exon 48989610 48990670 48989610 ID=Msa0815420-mRNA-1:exon:14701;Parent=Msa0815420-mRNA-1
chr5_3 exon 48990767 48990957 48990767 ID=Msa0815420-mRNA-1:exon:14702;Parent=Msa0815420-mRNA-1
chr5_3 exon 48991312 48991530 48991312 ID=Msa0815420-mRNA-1:exon:14703;Parent=Msa0815420-mRNA-1
chr5_3 exon 48991631 48991978 48991631 ID=Msa0815420-mRNA-1:exon:14704;Parent=Msa0815420-mRNA-1
chr5_3 five_prime_UTR 48981708 48982341 48981708 ID=Msa0815420-mRNA-1:five_prime_utr;Parent=Msa0815420-mRNA-1
chr5_3 CDS 48982342 48982384 48982342 ID=Msa0815420-mRNA-1:cds;Parent=Msa0815420-mRNA-1
chr5_3 CDS 48982730 48982845 48982730 ID=Msa0815420-mRNA-1:cds;Parent=Msa0815420-mRNA-1
chr5_3 CDS 48983035 48983133 48983035 ID=Msa0815420-mRNA-1:cds;Parent=Msa0815420-mRNA-1
chr5_3 CDS 48983242 48983298 48983242 ID=Msa0815420-mRNA-1:cds;Parent=Msa0815420-mRNA-1
chr5_3 CDS 48983387 48983542 48983387 ID=Msa0815420-mRNA-1:cds;Parent=Msa0815420-mRNA-1
chr5_3 CDS 48983625 48983709 48983625 ID=Msa0815420-mRNA-1:cds;Parent=Msa0815420-mRNA-1
chr5_3 CDS 48986498 48986588 48986498 ID=Msa0815420-mRNA-1:cds;Parent=Msa0815420-mRNA-1
chr5_3 CDS 48986684 48986848 48986684 ID=Msa0815420-mRNA-1:cds;Parent=Msa0815420-mRNA-1
chr5_3 CDS 48986934 48987056 48986934 ID=Msa0815420-mRNA-1:cds;Parent=Msa0815420-mRNA-1
chr5_3 CDS 48988667 48988742 48988667 ID=Msa0815420-mRNA-1:cds;Parent=Msa0815420-mRNA-1
chr5_3 CDS 48989253 48989400 48989253 ID=Msa0815420-mRNA-1:cds;Parent=Msa0815420-mRNA-1
chr5_3 CDS 48989610 48990670 48989610 ID=Msa0815420-mRNA-1:cds;Parent=Msa0815420-mRNA-1
chr5_3 CDS 48990767 48990957 48990767 ID=Msa0815420-mRNA-1:cds;Parent=Msa0815420-mRNA-1
chr5_3 CDS 48991312 48991489 48991312 ID=Msa0815420-mRNA-1:cds;Parent=Msa0815420-mRNA-1
chr5_3 three_prime_UTR 48991490 48991530 48991490 ID=Msa0815420-mRNA-1:three_prime_utr;Parent=Msa0815420-mRNA-1
chr5_3 three_prime_UTR 48991631 48991978 48991631 ID=Msa0815420-mRNA-1:three_prime_utr;Parent=Msa0815420-mRNA-1
Gene Sequence

>Msa0815420

ATGAAGCTTTCAACATCAGGAATGAGTCAGCAGGGTCATGAAGGAGGGGAGAAAAAGTGTTTGAATTCTGAGCTATGGCATGCATGTGCGGGTCCCTTAGTTTCTCTACCAACTTCAGGGACTCGTGTGGTTTACTTCCCTCAAGGTCATAGTGAGCAGGTTTCTGCCACAACCAACAGAGAAATTGATGGACAAATTCCGAATTATCCTAGCTTGCCGCCTCAGTTGATATGCCAACTTCATAATGTTACAATGCATGCAGATGTTGAAACAGATGAAGTGTATGCTCAGATGACGCTACAGCCGTTGACTCCGCAAGAGCAGAAAGATACGTTTCTTCCTATGGAATTAGGGATTCCAAGTAAGCAGCCTACAAATTATTTTTGCAAGACATTGACGGCGAGTGATACAAGCACACATGGAGGGTTCTCTGTTCCTCGTCGTGCAGCTGAGAAAGTTTTTCCTCCATTGGATTTCTCACAGCAACCTCCTGCTCAAGAACTAATTGCTAGGGATCTCCATGATGTTGAGTGGAAGTTTCGACATATTTTTCGGGGACAGCCAAAACGACACCTTCTTACCACAGGCTGGAGTGTATTTGTTAGTGCAAAAAGACTAGTAGCTGGAGATTCTGTGCTTTTTATTTGGAATGAAAAGAATCAGCTTCTTTTGGGAATACGTCGTGCCAGTAGGCCACAAACTGTTATGCCATCATCAGTTCTTTCAAGTGATAGCATGCACATTGGACTTCTTGCAGCTGCAGCACATGCTGCAGCAACTAATAGCTGCTTTACGGTGTTCTTTAATCCAAGGGCTAGTCCATCCGAGTTCGTCATACCACTCTCCAAATATATCAAAGCTGTGTACCATACACGCGTTTCTGTCGGTATGCGTTTCAGGATGCTTTTTGAGACTGAAGAATCAAGTGTCCGCAGGTACATGGGTACTATAACTAGCATAAGTGACATGGATCCTGTTCGGTGGCCAAATTCTCATTGGAGGTCTGTTAAGGTTGGTTGGGATGAATCGACAGCTGGGGAGAGACAGCCACGAGTATCGTTATGGGAAATTGAGCCTTTAACTACATTTCCAATGTATCCATCACTATTTCCCCTTAGATTGAAACGACCATGGCATCCTGGCACTTCTTCTTTTCTTGTTGGCTGTGGTGGTTTTGAGGACACTCTTTTGTCTCCTTTCTTTACAAAGGATGTTGTTACAGATGGCAGAGATGAGGCAACTAATGGACTGATGTGGATGCGAGGCGGTCCTGGAGACCATGGTCTTAATTCCATGAATTTTCAAGGTGCTGGATTGTTGCCCTGGATGCAGCCAAGACTCGATCCAACTTTGCTTGGAAATGATCATAATCAGCAATACCAAGCCATGTTGGCTGCTGCTGGTTTGCAGAACCAAGGGAATGTAGATCTATTAAGGCAACAGATGATGAATTTTCAACAGCCTTTCAATTATCAACAATCAGGAAACCTCAGTCCTATGCAGCTTCAGCAACAGCAAGCAATTCAACAATCCGTATCAACTAATAATATCATGCAACCACAAGGCCAAGGCTTGGCGGAGAATCTTTCTCAGCACATCCTTCAGAAATCGCACAACAATCGTGAAAACCAAACACAGCAACAAAGTTATCAAGATTCAGTTTTAATTCAAGGTGATCCGCTCCATCAGAAGCAACACTCTAGTTTGCCTTCACCGTCATACTCAAAACCAGATTTCATAGATTCAGGCATGAAGTTTGCTGCTTCGGTTTCACCGGGTCAAAACATGCTTGGTTCACTTTCTTCTGAAGGGAGTGGCAATCTGTTGAATTTATCTAGAAGTGGTCATTCTATGCTGACTGAACAGTCACCTCAACAATCATGGGCCTCAAAGTATTCACCTTCGCAGGTCGATGCCATTGGCAATTCGATGTCGCATGTGCAGTATTCCGGAAGAGATACATCAATCGTACAACCACATGGCAACTCAGATGCCCAAAATTCTGTTCTGTTTGGGGTCAATATCGATTCGTCTGGCCTTCTGCTCCCTACCACTGTCCCCCGTTATACTACTGCATCAGCTCATGCCGATGCATCGACAATGCCGTTAGGGGAGTCTAGTTTCCAGGGTTCTCCATATCCTTGCATGCAAGATTCATCGGAGTTGTTGCAAAGTGCAGGGCAAGTTGATGCGCAAAACCAGACACCGATATTTGTGAAGGTATACAAATCAGGTTCAGTAGGGCGCTCACTTGACATCTCGCGGTTCAACAGCTATCACGAGCTGCGGGAGGAGTTGGCTCAGATGTTTGGAATTGAGGGGAAATTTGAAGATCCTCTTAGATCAGGCTGGCAGCTTGTATTTGTCGACAGGGAGAACGATGTTCTTCTCCTTGGAGACGATCCGTGGGAATCATTTGTCAATAATGTTTGGTATATCAAAATACTTTCTCCTGAAGATATTCAGAAAATGGGAGAAGAAGCCATAGAATCCCTTGGTCCAAGTTCTGGACAAAGGATGAACAACGCTGGTGCAGAATCTCACGACATTGTTTCTGGACTACCATCATTAGGCTCACTTGAATACTGA
Protein sequence

>Msa0815420

MKLSTSGMSQQGHEGGEKKCLNSELWHACAGPLVSLPTSGTRVVYFPQGHSEQVSATTNREIDGQIPNYPSLPPQLICQLHNVTMHADVETDEVYAQMTLQPLTPQEQKDTFLPMELGIPSKQPTNYFCKTLTASDTSTHGGFSVPRRAAEKVFPPLDFSQQPPAQELIARDLHDVEWKFRHIFRGQPKRHLLTTGWSVFVSAKRLVAGDSVLFIWNEKNQLLLGIRRASRPQTVMPSSVLSSDSMHIGLLAAAAHAAATNSCFTVFFNPRASPSEFVIPLSKYIKAVYHTRVSVGMRFRMLFETEESSVRRYMGTITSISDMDPVRWPNSHWRSVKVGWDESTAGERQPRVSLWEIEPLTTFPMYPSLFPLRLKRPWHPGTSSFLVGCGGFEDTLLSPFFTKDVVTDGRDEATNGLMWMRGGPGDHGLNSMNFQGAGLLPWMQPRLDPTLLGNDHNQQYQAMLAAAGLQNQGNVDLLRQQMMNFQQPFNYQQSGNLSPMQLQQQQAIQQSVSTNNIMQPQGQGLAENLSQHILQKSHNNRENQTQQQSYQDSVLIQGDPLHQKQHSSLPSPSYSKPDFIDSGMKFAASVSPGQNMLGSLSSEGSGNLLNLSRSGHSMLTEQSPQQSWASKYSPSQVDAIGNSMSHVQYSGRDTSIVQPHGNSDAQNSVLFGVNIDSSGLLLPTTVPRYTTASAHADASTMPLGESSFQGSPYPCMQDSSELLQSAGQVDAQNQTPIFVKVYKSGSVGRSLDISRFNSYHELREELAQMFGIEGKFEDPLRSGWQLVFVDRENDVLLLGDDPWESFVNNVWYIKILSPEDIQKMGEEAIESLGPSSGQRMNNAGAESHDIVSGLPSLGSLEY*