Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1363640 | XP_013470509.1 | 85.965 | 627 | 24 | 5 | 1 | 572 | 2 | 619 | 0.0 | 1096 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1363640 | sp|Q5NYD9|SELO_AROAE | 45.833 | 552 | 208 | 10 | 83 | 572 | 1 | 523 | 1.38e-155 | 458 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1363640 | A0A072VRY6 | 85.965 | 627 | 24 | 5 | 1 | 572 | 2 | 619 | 0.0 | 1096 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa1349850 | Msa1363640 | 0.816027 | 6.832488e-52 | -8.615850e-47 |
| Msa0309060 | Msa1363640 | 0.805488 | 1.302909e-49 | -8.615850e-47 |
| Msa1113190 | Msa1363640 | 0.806204 | 9.216779e-50 | -8.615850e-47 |
| Msa1144610 | Msa1363640 | -0.806738 | 7.111286e-50 | -8.615850e-47 |
| Msa1144990 | Msa1363640 | -0.802745 | 4.848093e-49 | -8.615850e-47 |
| Msa0861560 | Msa1363640 | 0.806631 | 7.491273e-50 | -8.615850e-47 |
| Msa0929900 | Msa1363640 | -0.818928 | 1.517239e-52 | -8.615850e-47 |
| Msa0930950 | Msa1363640 | 0.822628 | 2.139209e-53 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1363640 | MtrunA17_Chr1g0213661 | 85.965 | 627 | 24 | 5 | 1 | 572 | 2 | 619 | 0.0 | 1096 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1363640 | AT5G13030.1 | 70.547 | 567 | 110 | 4 | 62 | 572 | 68 | 633 | 0.0 | 828 |
Find 171 sgRNAs with CRISPR-Local
Find 483 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| CAGATATGGAACAAAATTTA+TGG | 0.150312 | tig0018045:-58931 | Msa1363640:CDS |
| CACAGATAATATGAGCATTT+TGG | 0.161328 | tig0018045:-59232 | Msa1363640:CDS |
| CCTGGAAGGTCTGTGGTATT+TGG | 0.172714 | tig0018045:+59150 | None:intergenic |
| CTCCTATTTCTGCTGCTATT+TGG | 0.185352 | tig0018045:+57929 | None:intergenic |
| CTGGAAGGTCTGTGGTATTT+GGG | 0.211424 | tig0018045:+59151 | None:intergenic |
| GCTGCAGAAATCGGTGATTT+TGG | 0.217529 | tig0018045:-58106 | Msa1363640:CDS |
| ACTATTGATTATGGTCCATT+TGG | 0.245144 | tig0018045:-59204 | Msa1363640:CDS |
| TGGTAAACTTCTTACTAATA+TGG | 0.246433 | tig0018045:-58847 | Msa1363640:CDS |
| CTTGGAAGGGGATCGGTTCT+TGG | 0.250230 | tig0018045:+63423 | None:intergenic |
| GAAAAGAATATGAAAATAAA+TGG | 0.275587 | tig0018045:-63872 | None:intergenic |
| CCTGGAAATTGTTCGTGTTT+TGG | 0.279406 | tig0018045:-62331 | Msa1363640:CDS |
| TGCCACTACGAGGGTATAAA+TGG | 0.280750 | tig0018045:+63622 | None:intergenic |
| TTGGGTCTTACTATTGATTA+TGG | 0.283796 | tig0018045:-59213 | Msa1363640:CDS |
| ATCTCGAGTAACCAACTTTC+CGG | 0.293228 | tig0018045:+62742 | None:intergenic |
| GTGGTATTTGGGGTAAATTT+AGG | 0.296888 | tig0018045:+59162 | None:intergenic |
| TAGTTCCTGAGAATATATTT+AGG | 0.297091 | tig0018045:+58151 | None:intergenic |
| TGCTATGGTGGACATCAATT+TGG | 0.303727 | tig0018045:-62992 | Msa1363640:CDS |
| CTATTGATTATGGTCCATTT+GGG | 0.334050 | tig0018045:-59203 | Msa1363640:CDS |
| ATTGCACCCTGTTCTTCCTT+TGG | 0.341730 | tig0018045:+62429 | None:intergenic |
| ATAAAGTTGAAGATCTGAAT+TGG | 0.345823 | tig0018045:-63479 | Msa1363640:CDS |
| TTTAGGATTTACCATATTCA+TGG | 0.358201 | tig0018045:+58168 | None:intergenic |
| TGCATCCAATTGTGTCTAAC+TGG | 0.359223 | tig0018045:+57785 | None:intergenic |
| AGGTGGGAGCTACAGCTTAA+AGG | 0.363726 | tig0018045:-62899 | Msa1363640:CDS |
| TCTGGTGCATCACCTTTGCT+TGG | 0.365065 | tig0018045:-63034 | Msa1363640:CDS |
| GAGGAAGACCACCATGAATA+TGG | 0.366062 | tig0018045:-58179 | Msa1363640:CDS |
| TTCCAAATAGCAGCAGAAAT+AGG | 0.373963 | tig0018045:-57931 | Msa1363640:three_prime_UTR |
| CAGTGCTACGTAGCAGCATC+AGG | 0.376294 | tig0018045:-62835 | Msa1363640:CDS |
| CTCCTCCGACGCGGCGGCGG+TGG | 0.378116 | tig0018045:-63657 | Msa1363640:CDS |
| CAGGTCCTCATTACTACCTC+TGG | 0.386336 | tig0018045:+62350 | None:intergenic |
| CCAAAACACGAACAATTTCC+AGG | 0.391852 | tig0018045:+62331 | None:intergenic |
| TCGTAGGTTACTTAAATTAG+TGG | 0.396198 | tig0018045:-58077 | Msa1363640:CDS |
| TCAGCTGTTTATTATACTTA+GGG | 0.396482 | tig0018045:+58871 | None:intergenic |
| TTCCATGATTTCTAGATGGC+AGG | 0.396563 | tig0018045:-59283 | Msa1363640:CDS |
| CCACCATAGCATTGAGCATA+AGG | 0.397985 | tig0018045:+63004 | None:intergenic |
| CAAATCTTCGGTCGGGTGGG+TGG | 0.400037 | tig0018045:+63788 | None:intergenic |
| TGGGAATCCAAAGGAAGAAC+AGG | 0.400394 | tig0018045:-62436 | Msa1363640:CDS |
| GGTATGTGGGCTGGCCAGTT+GGG | 0.400526 | tig0018045:-62971 | Msa1363640:CDS |
| CGTTGCCGACTTACTTGACT+TGG | 0.402304 | tig0018045:-63200 | Msa1363640:CDS |
| TGAATGACTCTCACCTCTCT+TGG | 0.408759 | tig0018045:+63405 | None:intergenic |
| ATATATGAAAATAAATATAT+CGG | 0.412028 | tig0018045:+57648 | None:intergenic |
| ATGGTAGAGCAATCACTCTT+GGG | 0.415418 | tig0018045:-62946 | Msa1363640:CDS |
| CTGCTTCCATGATTTCTAGA+TGG | 0.416354 | tig0018045:-59287 | Msa1363640:CDS |
| CCGCGTCGGAGGAGTGAGTT+TGG | 0.416628 | tig0018045:+63666 | None:intergenic |
| AGAGAAAGAGCACGGGTTGT+TGG | 0.417418 | tig0018045:+62773 | None:intergenic |
| GACGCGGCGGCGGTGGCATA+AGG | 0.419806 | tig0018045:-63650 | Msa1363640:CDS |
| CCACAGACCTTCCAGGTAGA+AGG | 0.424033 | tig0018045:-59143 | Msa1363640:CDS |
| CATCTCCAGTTAGACACAAT+TGG | 0.425261 | tig0018045:-57790 | Msa1363640:three_prime_UTR |
| CCAAATACCACAGACCTTCC+AGG | 0.429861 | tig0018045:-59150 | Msa1363640:CDS |
| TAAAGTTGAAGATCTGAATT+GGG | 0.432071 | tig0018045:-63478 | Msa1363640:CDS |
| ATCAGCTGTTTATTATACTT+AGG | 0.433343 | tig0018045:+58870 | None:intergenic |
| CCTGGTCGATATGCCCATGC+TGG | 0.435594 | tig0018045:+58004 | None:intergenic |
| TCACTCCTCCGACGCGGCGG+CGG | 0.436088 | tig0018045:-63660 | Msa1363640:CDS |
| CTGGTCGATATGCCCATGCT+GGG | 0.436470 | tig0018045:+58005 | None:intergenic |
| TGGTATGTGGGCTGGCCAGT+TGG | 0.438275 | tig0018045:-62972 | Msa1363640:CDS |
| TATCGATTTCATCAAATCTT+CGG | 0.442858 | tig0018045:+63776 | None:intergenic |
| GAGAAGAAAAGGGGAAAATC+AGG | 0.445633 | tig0018045:+63055 | None:intergenic |
| GTGATGCACCAGAGAAGAAA+AGG | 0.448708 | tig0018045:+63044 | None:intergenic |
| TTACTCATGTTCTCAATATG+AGG | 0.454798 | tig0018045:+62282 | None:intergenic |
| TCCTCATGAGTTGCCTGCTT+AGG | 0.460380 | tig0018045:-57962 | Msa1363640:exon |
| GCAATTGATGCTGCAGAAAT+CGG | 0.460683 | tig0018045:-58115 | Msa1363640:CDS |
| CCCCTGCCATCTAGAAATCA+TGG | 0.468873 | tig0018045:+59281 | None:intergenic |
| TCCATGATTTCTAGATGGCA+GGG | 0.469623 | tig0018045:-59282 | Msa1363640:CDS |
| GATGGTAGAGCAATCACTCT+TGG | 0.471143 | tig0018045:-62947 | Msa1363640:CDS |
| ATGATCCACAACTCGTTGTA+TGG | 0.474055 | tig0018045:-63231 | Msa1363640:CDS |
| TTGCTCTACCATCACCCAAC+TGG | 0.476997 | tig0018045:+62957 | None:intergenic |
| AGCTACAGCTTAAAGGTGCT+GGG | 0.478291 | tig0018045:-62892 | Msa1363640:CDS |
| GAGCTACAGCTTAAAGGTGC+TGG | 0.480131 | tig0018045:-62893 | Msa1363640:CDS |
| ATTCCTGGCTGCTCATCAAA+AGG | 0.480253 | tig0018045:+58049 | None:intergenic |
| CTGCAGCATCAATTGCAGTC+TGG | 0.482061 | tig0018045:+58122 | None:intergenic |
| TCATCAAATCTTCGGTCGGG+TGG | 0.483287 | tig0018045:+63784 | None:intergenic |
| TGGAATACGCCTACCTAAGC+AGG | 0.488254 | tig0018045:+57949 | None:intergenic |
| GTGAAGCAATGCATCACCTT+GGG | 0.497196 | tig0018045:-62799 | Msa1363640:CDS |
| ACCAACCTGACATTGGTTTG+TGG | 0.499642 | tig0018045:-59107 | Msa1363640:CDS |
| AAATCTTCGGTCGGGTGGGT+GGG | 0.500878 | tig0018045:+63789 | None:intergenic |
| TAAATCCTAAATATATTCTC+AGG | 0.504170 | tig0018045:-58156 | Msa1363640:CDS |
| TGGGCTGGCCAGTTGGGTGA+TGG | 0.505887 | tig0018045:-62965 | Msa1363640:CDS |
| AGCAGCAGAAATAGGAGAGA+AGG | 0.506113 | tig0018045:-57923 | Msa1363640:three_prime_UTR |
| AAAAGAAGAGAAGAGAAAGA+TGG | 0.508504 | tig0018045:-63739 | Msa1363640:exon |
| CACCTCTCTTGGAAGGGGAT+CGG | 0.508748 | tig0018045:+63416 | None:intergenic |
| CATGATGGATTCAGCAGAGA+AGG | 0.510205 | tig0018045:-63580 | Msa1363640:CDS |
| ATTTCATCAAATCTTCGGTC+GGG | 0.515225 | tig0018045:+63781 | None:intergenic |
| TCTTGTCACCACCGGAAAGT+TGG | 0.519286 | tig0018045:-62753 | Msa1363640:CDS |
| TGCCACCGCCGCCGCGTCGG+AGG | 0.520075 | tig0018045:+63655 | None:intergenic |
| TTGTACTAGTATAGATGAGT+TGG | 0.526466 | tig0018045:-57832 | Msa1363640:three_prime_UTR |
| CAAAGAGGCTAACTATGCAT+TGG | 0.528156 | tig0018045:-59034 | Msa1363640:CDS |
| CCATCGGCAAAGCGACTGTA+AGG | 0.528526 | tig0018045:+62863 | None:intergenic |
| CCTTACAGTCGCTTTGCCGA+TGG | 0.528989 | tig0018045:-62863 | Msa1363640:CDS |
| AGATTCCACAAACCAATGTC+AGG | 0.532230 | tig0018045:+59102 | None:intergenic |
| GACTCTCACCTCTCTTGGAA+GGG | 0.532280 | tig0018045:+63410 | None:intergenic |
| CAGAGGTAGTAATGAGGACC+TGG | 0.533335 | tig0018045:-62349 | Msa1363640:CDS |
| GTGGACATCAATTTGGTATG+TGG | 0.534249 | tig0018045:-62985 | Msa1363640:CDS |
| AAGTATAATAAACAGCTGAT+TGG | 0.534474 | tig0018045:-58867 | Msa1363640:CDS |
| TTATACCCTCGTAGTGGCAG+TGG | 0.535527 | tig0018045:-63618 | Msa1363640:CDS |
| CATGAGTTGCCTGCTTAGGT+AGG | 0.535805 | tig0018045:-57958 | Msa1363640:exon |
| CCATGATTTCTAGATGGCAG+GGG | 0.537445 | tig0018045:-59281 | Msa1363640:CDS |
| TTATGCCACCGCCGCCGCGT+CGG | 0.540438 | tig0018045:+63652 | None:intergenic |
| TGACTCTCACCTCTCTTGGA+AGG | 0.541187 | tig0018045:+63409 | None:intergenic |
| GCTCTTTCTCTTGTCACCAC+CGG | 0.542597 | tig0018045:-62761 | Msa1363640:CDS |
| TTGCCTTATGCTCAATGCTA+TGG | 0.543945 | tig0018045:-63007 | Msa1363640:CDS |
| CTTACATCAAACAAGTATGC+AGG | 0.545376 | tig0018045:-62207 | Msa1363640:intron |
| CAATTGTGTCTAACTGGAGA+TGG | 0.550260 | tig0018045:+57791 | None:intergenic |
| CATCAATTTGGTATGTGGGC+TGG | 0.554848 | tig0018045:-62980 | Msa1363640:CDS |
| TGATGCACCAGAGAAGAAAA+GGG | 0.555586 | tig0018045:+63045 | None:intergenic |
| TACTCAATTCTAACTCTCAA+AGG | 0.557576 | tig0018045:-62919 | Msa1363640:CDS |
| CATGATTTCTAGATGGCAGG+GGG | 0.557832 | tig0018045:-59280 | Msa1363640:CDS |
| GAGAGCTTATCTTTCAGCAC+GGG | 0.557997 | tig0018045:-62255 | Msa1363640:CDS |
| CCAGCATGGGCATATCGACC+AGG | 0.558346 | tig0018045:-58004 | Msa1363640:CDS |
| CATCGTTAGATGCAGCATGA+TGG | 0.558707 | tig0018045:-63595 | Msa1363640:CDS |
| GCTGTTTATTATACTTAGGG+AGG | 0.564163 | tig0018045:+58874 | None:intergenic |
| TCCACAAACCAATGTCAGGT+TGG | 0.565880 | tig0018045:+59106 | None:intergenic |
| CATCAAATCTTCGGTCGGGT+GGG | 0.566844 | tig0018045:+63785 | None:intergenic |
| GATTTCATCAAATCTTCGGT+CGG | 0.567816 | tig0018045:+63780 | None:intergenic |
| TCAATTCTAACTCTCAAAGG+TGG | 0.568353 | tig0018045:-62916 | Msa1363640:CDS |
| TGGTCGATATGCCCATGCTG+GGG | 0.570038 | tig0018045:+58006 | None:intergenic |
| GTTTCTTCTTCTGATGAACA+AGG | 0.571299 | tig0018045:+63505 | None:intergenic |
| TTTGCAAACCAACCTGACAT+TGG | 0.573221 | tig0018045:-59114 | Msa1363640:CDS |
| ACTCTCACCTCTCTTGGAAG+GGG | 0.575231 | tig0018045:+63411 | None:intergenic |
| CATGCATAGAAGTTCTCTCA+TGG | 0.576519 | tig0018045:+57694 | None:intergenic |
| TGTTCTCAATATGAGGAAAG+TGG | 0.577108 | tig0018045:+62289 | None:intergenic |
| TAAGGCAACGCTCCAAGCAA+AGG | 0.579997 | tig0018045:+63022 | None:intergenic |
| TACCTCTGGAGGCATGTAGT+TGG | 0.581249 | tig0018045:+62364 | None:intergenic |
| AACCGATCCCCTTCCAAGAG+AGG | 0.583369 | tig0018045:-63418 | Msa1363640:intron |
| AACAGTACCTTCTACCTGGA+AGG | 0.587812 | tig0018045:+59136 | None:intergenic |
| GCAAAACAGTACCTTCTACC+TGG | 0.590125 | tig0018045:+59132 | None:intergenic |
| AGGCTAACTATGCATTGGAA+AGG | 0.594786 | tig0018045:-59029 | Msa1363640:intron |
| AAGTTGAAGATTCAGAAACT+AGG | 0.595584 | tig0018045:-57893 | Msa1363640:three_prime_UTR |
| TGGACATCAATTTGGTATGT+GGG | 0.600111 | tig0018045:-62984 | Msa1363640:CDS |
| CAATTCTAACTCTCAAAGGT+GGG | 0.600171 | tig0018045:-62915 | Msa1363640:CDS |
| CACGGGTTGTTGGAATCCCA+AGG | 0.603470 | tig0018045:+62783 | None:intergenic |
| AGTGAAGCAATGCATCACCT+TGG | 0.603760 | tig0018045:-62800 | Msa1363640:CDS |
| ATTATCCAAGTCAAGTAAGT+CGG | 0.605674 | tig0018045:+63195 | None:intergenic |
| CAAGTCAAGTAAGTCGGCAA+CGG | 0.606848 | tig0018045:+63201 | None:intergenic |
| TCAGACCATACAACGAGTTG+TGG | 0.608864 | tig0018045:+63226 | None:intergenic |
| CAAGAAAGCATGCATACACC+TGG | 0.609213 | tig0018045:+57986 | None:intergenic |
| ATGATGGATTCAGCAGAGAA+GGG | 0.612440 | tig0018045:-63579 | Msa1363640:CDS |
| TGGAAGGTCTGTGGTATTTG+GGG | 0.613085 | tig0018045:+59152 | None:intergenic |
| TGGTGACAAGAGAAAGAGCA+CGG | 0.617950 | tig0018045:+62765 | None:intergenic |
| CCTTATGCTCAATGCTATGG+TGG | 0.618664 | tig0018045:-63004 | Msa1363640:CDS |
| ACGTAGCACTGCAAGACCAT+CGG | 0.621214 | tig0018045:+62847 | None:intergenic |
| GATGCATTGCTTCACTGCAA+AGG | 0.621681 | tig0018045:+62807 | None:intergenic |
| GGGATCGGTTCTTGGATCAG+AGG | 0.623339 | tig0018045:+63431 | None:intergenic |
| CCTTCTACCTGGAAGGTCTG+TGG | 0.624629 | tig0018045:+59143 | None:intergenic |
| GGATCGGTTCTTGGATCAGA+GGG | 0.629476 | tig0018045:+63432 | None:intergenic |
| TCATTTGATAAATGACAAAG+AGG | 0.633053 | tig0018045:-59049 | Msa1363640:CDS |
| TGAGAGCTTATCTTTCAGCA+CGG | 0.634202 | tig0018045:-62256 | Msa1363640:CDS |
| ACCTAAGCAGGCAACTCATG+AGG | 0.634942 | tig0018045:+57961 | None:intergenic |
| TGAAGAAGATCATTCTGTCG+TGG | 0.640885 | tig0018045:-62232 | Msa1363640:CDS |
| TTCCATTTATACCCTCGTAG+TGG | 0.645721 | tig0018045:-63624 | Msa1363640:CDS |
| GGTCGATATGCCCATGCTGG+GGG | 0.646118 | tig0018045:+58007 | None:intergenic |
| TGGTAGAGCAATCACTCTTG+GGG | 0.646632 | tig0018045:-62945 | Msa1363640:CDS |
| AGGATTTACCATATTCATGG+TGG | 0.646641 | tig0018045:+58171 | None:intergenic |
| TGAGTTACAGAGTCAAGCAA+CGG | 0.647458 | tig0018045:+63546 | None:intergenic |
| GGATACAACGACAACAGACG+AGG | 0.648594 | tig0018045:+63687 | None:intergenic |
| GTGGCATTTCTGATGATCAG+AGG | 0.648909 | tig0018045:-58198 | Msa1363640:CDS |
| AGTGCTACGTAGCAGCATCA+GGG | 0.657407 | tig0018045:-62834 | Msa1363640:CDS |
| GTATTCTATATCAGCATGGG+CGG | 0.663034 | tig0018045:-59328 | Msa1363640:intron |
| GGTGACAAGAGAAAGAGCAC+GGG | 0.663895 | tig0018045:+62766 | None:intergenic |
| TGCCTCCAGAGGTAGTAATG+AGG | 0.666249 | tig0018045:-62355 | Msa1363640:CDS |
| CGATGCCACTGCCACTACGA+GGG | 0.669120 | tig0018045:+63613 | None:intergenic |
| AACTCACTCCTCCGACGCGG+CGG | 0.675677 | tig0018045:-63663 | Msa1363640:CDS |
| GGATCATCTACTGCAACTGA+TGG | 0.679409 | tig0018045:+63247 | None:intergenic |
| GTCCTCATTACTACCTCTGG+AGG | 0.687126 | tig0018045:+62353 | None:intergenic |
| GATGCACCAGAGAAGAAAAG+GGG | 0.694066 | tig0018045:+63046 | None:intergenic |
| CACATGCAGTGGGAATCCAA+AGG | 0.701489 | tig0018045:-62445 | Msa1363640:intron |
| TCGAGTAACCAACTTTCCGG+TGG | 0.702215 | tig0018045:+62745 | None:intergenic |
| GATACAACGACAACAGACGA+GGG | 0.702568 | tig0018045:+63688 | None:intergenic |
| TACCAACTACATGCCTCCAG+AGG | 0.702592 | tig0018045:-62366 | Msa1363640:CDS |
| GGGAATCCAAAGGAAGAACA+GGG | 0.708027 | tig0018045:-62435 | Msa1363640:CDS |
| AGAGGGTAAGTCTCTCACAA+AGG | 0.708435 | tig0018045:+63449 | None:intergenic |
| ACGATGCCACTGCCACTACG+AGG | 0.727382 | tig0018045:+63612 | None:intergenic |
| CCAAACTCACTCCTCCGACG+CGG | 0.739207 | tig0018045:-63666 | Msa1363640:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | TTTAGAATTAAATTTATTTG+TGG | - | tig0018045:60603-60622 | Msa1363640:intron | 10.0% |
| !! | AGAACTAAAAATTAAAAAAA+TGG | + | tig0018045:63775-63794 | None:intergenic | 10.0% |
| !!! | TCTTAATTTTTTAGTTATCT+GGG | + | tig0018045:59617-59636 | None:intergenic | 15.0% |
| !!! | TTCTTAATTTTTTAGTTATC+TGG | + | tig0018045:59618-59637 | None:intergenic | 15.0% |
| !!! | TGGTTTTTTTCTTAAATAAA+AGG | + | tig0018045:60373-60392 | None:intergenic | 15.0% |
| !!! | TAAACTACTATTTTTTTTGA+AGG | + | tig0018045:60414-60433 | None:intergenic | 15.0% |
| !! | AAACTAATAGTAGTAATATA+AGG | - | tig0018045:60512-60531 | Msa1363640:intron | 15.0% |
| !!! | TAGTATTTTTTTTATTAGCA+TGG | - | tig0018045:60577-60596 | Msa1363640:intron | 15.0% |
| !!! | AATAATTCTTAATTTTCAAG+TGG | - | tig0018045:62899-62918 | Msa1363640:CDS | 15.0% |
| !!! | TAATAATTTAATTTGCTTGC+AGG | - | tig0018045:58207-58226 | Msa1363640:CDS | 20.0% |
| !!! | GTAAAATAATTCTTTTAGGA+GGG | - | tig0018045:59321-59340 | Msa1363640:intron | 20.0% |
| !!! | TAAAATAATTCTTTTAGGAG+GGG | - | tig0018045:59322-59341 | Msa1363640:intron | 20.0% |
| !!! | AAAAGGTTTTAAGTGAATAA+CGG | + | tig0018045:60033-60052 | None:intergenic | 20.0% |
| !!! | ACAATTTTGACTCTAAAAAA+AGG | + | tig0018045:60050-60069 | None:intergenic | 20.0% |
| !! | GGAAAAAAAAAAACTACTAT+TGG | + | tig0018045:60393-60412 | None:intergenic | 20.0% |
| !!! | CATGAATTTTGTAATGTTTA+AGG | - | tig0018045:60550-60569 | Msa1363640:intron | 20.0% |
| !! | TATGTTACTAATCTCTAATT+AGG | + | tig0018045:60746-60765 | None:intergenic | 20.0% |
| !!! | TAGTGAAACTTTTTTTATCT+TGG | - | tig0018045:60975-60994 | Msa1363640:intron | 20.0% |
| !!! | TTATTTTCTGCTTAATTGTT+TGG | - | tig0018045:61097-61116 | Msa1363640:intron | 20.0% |
| !! | CAATTTAAGAAATTACTAAC+TGG | + | tig0018045:61840-61859 | None:intergenic | 20.0% |
| !! | GTCACTAGTAAAATAATAAA+TGG | + | tig0018045:62054-62073 | None:intergenic | 20.0% |
| !!! | TTCTGTTATCTTCATTTTTA+TGG | - | tig0018045:62078-62097 | Msa1363640:intron | 20.0% |
| !!! | TCTGTTATCTTCATTTTTAT+GGG | - | tig0018045:62079-62098 | Msa1363640:intron | 20.0% |
| !!! | AAATCCTTTGTTCTTTTTAA+TGG | - | tig0018045:62156-62175 | Msa1363640:intron | 20.0% |
| !! | AATACCATTAAAAAGAACAA+AGG | + | tig0018045:62163-62182 | None:intergenic | 20.0% |
| !! | AAATCAACAATTTGTGAAAA+GGG | + | tig0018045:63158-63177 | None:intergenic | 20.0% |
| !! | TAAATCCTAAATATATTCTC+AGG | - | tig0018045:63350-63369 | Msa1363640:intron | 20.0% |
| !!! | TATCGATTTCATCAAATCTT+CGG | + | tig0018045:57733-57752 | None:intergenic | 25.0% |
| ! | ATAAAGTTGAAGATCTGAAT+TGG | - | tig0018045:58027-58046 | Msa1363640:CDS | 25.0% |
| ! | TAAAGTTGAAGATCTGAATT+GGG | - | tig0018045:58028-58047 | Msa1363640:CDS | 25.0% |
| ! | TACTTGTTTGTTTGTTTGTT+TGG | + | tig0018045:58971-58990 | None:intergenic | 25.0% |
| !! | GCAGGTAAAATAATTCTTTT+AGG | - | tig0018045:59317-59336 | Msa1363640:CDS | 25.0% |
| !! | GGTAAAATAATTCTTTTAGG+AGG | - | tig0018045:59320-59339 | Msa1363640:intron | 25.0% |
| !! | ACTGAATAAACACTTTTGAT+TGG | - | tig0018045:59423-59442 | Msa1363640:intron | 25.0% |
| !! | GATTGGTTATTTCACTTATT+TGG | - | tig0018045:59440-59459 | Msa1363640:intron | 25.0% |
| ! | AAGAATGAATGAGGAAATTA+GGG | + | tig0018045:59496-59515 | None:intergenic | 25.0% |
| !!! | ATTTTAGTTTGCATTAAGCT+CGG | + | tig0018045:59567-59586 | None:intergenic | 25.0% |
| ! | TTTGTTAGTCAAGATTTATG+TGG | - | tig0018045:60261-60280 | Msa1363640:intron | 25.0% |
| ! | TTGTTAGTCAAGATTTATGT+GGG | - | tig0018045:60262-60281 | Msa1363640:intron | 25.0% |
| ! | CTTAAATAAAAGGTCAAAAG+AGG | + | tig0018045:60363-60382 | None:intergenic | 25.0% |
| ! | TTAGTTTATTACTCAAGTAG+TGG | + | tig0018045:60499-60518 | None:intergenic | 25.0% |
| ! | AGAACATTTATGCTTATATG+CGG | + | tig0018045:60811-60830 | None:intergenic | 25.0% |
| ! | GCATAAATGTTCTAATTGTA+AGG | - | tig0018045:60818-60837 | Msa1363640:intron | 25.0% |
| !!! | AAACTTTTTTTATCTTGGAG+TGG | - | tig0018045:60980-60999 | Msa1363640:intron | 25.0% |
| ! | ATCATATCATAGTATGATGA+AGG | + | tig0018045:61037-61056 | None:intergenic | 25.0% |
| !! | TTGTGTATGATTTTGTAATG+TGG | - | tig0018045:61900-61919 | Msa1363640:intron | 25.0% |
| !!! | TTTGGTATTTTTGAAGTGAT+TGG | + | tig0018045:61955-61974 | None:intergenic | 25.0% |
| !! | ACAGATAATATGAGCATTTT+GGG | - | tig0018045:62275-62294 | Msa1363640:CDS | 25.0% |
| ! | TCATTTGATAAATGACAAAG+AGG | - | tig0018045:62457-62476 | Msa1363640:intron | 25.0% |
| !! | TGAATTTTTCTCCTATAAAG+AGG | + | tig0018045:62536-62555 | None:intergenic | 25.0% |
| ! | CAGATATGGAACAAAATTTA+TGG | - | tig0018045:62575-62594 | Msa1363640:intron | 25.0% |
| ! | TCAGCTGTTTATTATACTTA+GGG | + | tig0018045:62638-62657 | None:intergenic | 25.0% |
| ! | ATCAGCTGTTTATTATACTT+AGG | + | tig0018045:62639-62658 | None:intergenic | 25.0% |
| ! | AAGTATAATAAACAGCTGAT+TGG | - | tig0018045:62639-62658 | Msa1363640:intron | 25.0% |
| ! | TGGTAAACTTCTTACTAATA+TGG | - | tig0018045:62659-62678 | Msa1363640:intron | 25.0% |
| ! | CAATTATACCTCGTATATAT+AGG | + | tig0018045:62841-62860 | None:intergenic | 25.0% |
| !!! | TAATTTTCAAGTGGCATAAT+CGG | - | tig0018045:62908-62927 | Msa1363640:CDS | 25.0% |
| !!! | ATACCTTTTGAAATTTTGCT+TGG | - | tig0018045:63086-63105 | Msa1363640:intron | 25.0% |
| !!! | TTTTGAAATTTTGCTTGGTT+GGG | - | tig0018045:63091-63110 | Msa1363640:intron | 25.0% |
| ! | CAAATCAACAATTTGTGAAA+AGG | + | tig0018045:63159-63178 | None:intergenic | 25.0% |
| !! | TTTAGGATTTACCATATTCA+TGG | + | tig0018045:63341-63360 | None:intergenic | 25.0% |
| ! | TAGTTCCTGAGAATATATTT+AGG | + | tig0018045:63358-63377 | None:intergenic | 25.0% |
| AAAAGAAGAGAAGAGAAAGA+TGG | - | tig0018045:57767-57786 | Msa1363640:three_prime_UTR | 30.0% | |
| ATTATCCAAGTCAAGTAAGT+CGG | + | tig0018045:58314-58333 | None:intergenic | 30.0% | |
| !! | TCTTTGAAATCTGAAATGGA+GGG | + | tig0018045:58431-58450 | None:intergenic | 30.0% |
| TACTCAATTCTAACTCTCAA+AGG | - | tig0018045:58587-58606 | Msa1363640:intron | 30.0% | |
| ! | TTGTTTGTTTGGTGAAGTAA+TGG | + | tig0018045:58960-58979 | None:intergenic | 30.0% |
| TTACTCATGTTCTCAATATG+AGG | + | tig0018045:59227-59246 | None:intergenic | 30.0% | |
| TAACGAAAATTGAGGTGAAA+AGG | + | tig0018045:59351-59370 | None:intergenic | 30.0% | |
| ! | TTTTCACCTCAATTTTCGTT+AGG | - | tig0018045:59350-59369 | Msa1363640:intron | 30.0% |
| TTTAGTCCTAACGAAAATTG+AGG | + | tig0018045:59359-59378 | None:intergenic | 30.0% | |
| CAAGAATGAATGAGGAAATT+AGG | + | tig0018045:59497-59516 | None:intergenic | 30.0% | |
| !!! | TTTTAGTTTGCATTAAGCTC+GGG | + | tig0018045:59566-59585 | None:intergenic | 30.0% |
| AATCCGTCATTCATAACATT+GGG | + | tig0018045:59693-59712 | None:intergenic | 30.0% | |
| TAATCCGTCATTCATAACAT+TGG | + | tig0018045:59694-59713 | None:intergenic | 30.0% | |
| TTGTTAAATAGCAATCGTGA+CGG | + | tig0018045:59843-59862 | None:intergenic | 30.0% | |
| TAGAGTCAAAATTGTACGAT+CGG | - | tig0018045:60055-60074 | Msa1363640:intron | 30.0% | |
| ATGAAAGGAGATTGTTTATG+CGG | - | tig0018045:60205-60224 | Msa1363640:intron | 30.0% | |
| ! | TTTTAAGCCCATTATACTCT+CGG | + | tig0018045:60307-60326 | None:intergenic | 30.0% |
| ! | CTTTTATTACTTTCACTGCA+TGG | - | tig0018045:60337-60356 | Msa1363640:intron | 30.0% |
| GAGATTAGTAACATAACTGT+AGG | - | tig0018045:60751-60770 | Msa1363640:intron | 30.0% | |
| TTAGTAACATAACTGTAGGA+CGG | - | tig0018045:60755-60774 | Msa1363640:intron | 30.0% | |
| TCAACACTAATGACAAAAAC+AGG | + | tig0018045:61149-61168 | None:intergenic | 30.0% | |
| !! | TGTTTTTGTCATTAGTGTTG+AGG | - | tig0018045:61148-61167 | Msa1363640:intron | 30.0% |
| AAACCAAACACTGAAATAGA+AGG | + | tig0018045:61221-61240 | None:intergenic | 30.0% | |
| AAATTGGTGTGTTTAGACTA+TGG | - | tig0018045:61517-61536 | Msa1363640:intron | 30.0% | |
| TACCTTTATATGTGAAGAGT+TGG | - | tig0018045:61551-61570 | Msa1363640:intron | 30.0% | |
| ACCTTTATATGTGAAGAGTT+GGG | - | tig0018045:61552-61571 | Msa1363640:intron | 30.0% | |
| ! | AAAAATAAGATGGACTTGGT+GGG | + | tig0018045:61661-61680 | None:intergenic | 30.0% |
| ! | TAAAAATAAGATGGACTTGG+TGG | + | tig0018045:61662-61681 | None:intergenic | 30.0% |
| ! | CTGTAAAAATAAGATGGACT+TGG | + | tig0018045:61665-61684 | None:intergenic | 30.0% |
| GGACAACTGTAAAAATAAGA+TGG | + | tig0018045:61671-61690 | None:intergenic | 30.0% | |
| TATCCAACACTAAGAATAAC+TGG | + | tig0018045:61737-61756 | None:intergenic | 30.0% | |
| ! | GTTATTCTTAGTGTTGGATA+CGG | - | tig0018045:61737-61756 | Msa1363640:intron | 30.0% |
| ! | TTATTCTTAGTGTTGGATAC+GGG | - | tig0018045:61738-61757 | Msa1363640:intron | 30.0% |
| AATTACTAACTGGACCATAT+AGG | + | tig0018045:61830-61849 | None:intergenic | 30.0% | |
| !! | CTTTTTGAAAGTAGTGAATG+AGG | - | tig0018045:61870-61889 | Msa1363640:intron | 30.0% |
| TAACTACATAAGACAGAGTT+TGG | + | tig0018045:61973-61992 | None:intergenic | 30.0% | |
| AATGGTATTCTATATCAGCA+TGG | - | tig0018045:62174-62193 | Msa1363640:intron | 30.0% | |
| ATGGTATTCTATATCAGCAT+GGG | - | tig0018045:62175-62194 | Msa1363640:intron | 30.0% | |
| ! | CACAGATAATATGAGCATTT+TGG | - | tig0018045:62274-62293 | Msa1363640:CDS | 30.0% |
| ! | TTGGGTCTTACTATTGATTA+TGG | - | tig0018045:62293-62312 | Msa1363640:CDS | 30.0% |
| ! | ACTATTGATTATGGTCCATT+TGG | - | tig0018045:62302-62321 | Msa1363640:CDS | 30.0% |
| ! | CTATTGATTATGGTCCATTT+GGG | - | tig0018045:62303-62322 | Msa1363640:CDS | 30.0% |
| TAGGAGAAAAATTCACCTTA+TGG | - | tig0018045:62541-62560 | Msa1363640:intron | 30.0% | |
| AGAAAAATTCACCTTATGGT+TGG | - | tig0018045:62545-62564 | Msa1363640:intron | 30.0% | |
| GATATAATGACCAAAAAGCT+TGG | - | tig0018045:62609-62628 | Msa1363640:intron | 30.0% | |
| CACACTCTCAAATATTAAAG+CGG | - | tig0018045:62716-62735 | Msa1363640:intron | 30.0% | |
| !! | TCTAATAGCACTGACTTTAA+TGG | + | tig0018045:62774-62793 | None:intergenic | 30.0% |
| ! | AAGTCAGTGCTATTAGATAT+TGG | - | tig0018045:62777-62796 | Msa1363640:CDS | 30.0% |
| GTTGAAAACCTATATATACG+AGG | - | tig0018045:62830-62849 | Msa1363640:CDS | 30.0% | |
| ! | ATTATTTTCTACAAGTGCCT+TGG | + | tig0018045:62885-62904 | None:intergenic | 30.0% |
| !!! | AATCGGTGTCATAAAGTTTT+TGG | - | tig0018045:62925-62944 | Msa1363640:CDS | 30.0% |
| TTGAAGATGCATACTATCAT+TGG | - | tig0018045:62976-62995 | Msa1363640:CDS | 30.0% | |
| CAACCAAGCAAAATTTCAAA+AGG | + | tig0018045:63092-63111 | None:intergenic | 30.0% | |
| !!! | CTTTTGAAATTTTGCTTGGT+TGG | - | tig0018045:63090-63109 | Msa1363640:intron | 30.0% |
| ACAATTTGTGAAAAGGGAAA+AGG | + | tig0018045:63152-63171 | None:intergenic | 30.0% | |
| TAAATCAATTGTGACCAAGA+TGG | - | tig0018045:63232-63251 | Msa1363640:CDS | 30.0% | |
| TCGTAGGTTACTTAAATTAG+TGG | - | tig0018045:63429-63448 | Msa1363640:CDS | 30.0% | |
| AAGTTGAAGATTCAGAAACT+AGG | - | tig0018045:63613-63632 | Msa1363640:CDS | 30.0% | |
| TTGTACTAGTATAGATGAGT+TGG | - | tig0018045:63674-63693 | Msa1363640:CDS | 30.0% | |
| ATTTCATCAAATCTTCGGTC+GGG | + | tig0018045:57728-57747 | None:intergenic | 35.0% | |
| GATTTCATCAAATCTTCGGT+CGG | + | tig0018045:57729-57748 | None:intergenic | 35.0% | |
| GTTTCTTCTTCTGATGAACA+AGG | + | tig0018045:58004-58023 | None:intergenic | 35.0% | |
| !! | GTCTTTGAAATCTGAAATGG+AGG | + | tig0018045:58432-58451 | None:intergenic | 35.0% |
| !! | CAGGTCTTTGAAATCTGAAA+TGG | + | tig0018045:58435-58454 | None:intergenic | 35.0% |
| TGGACATCAATTTGGTATGT+GGG | - | tig0018045:58522-58541 | Msa1363640:intron | 35.0% | |
| TCAATTCTAACTCTCAAAGG+TGG | - | tig0018045:58590-58609 | Msa1363640:intron | 35.0% | |
| CAATTCTAACTCTCAAAGGT+GGG | - | tig0018045:58591-58610 | Msa1363640:intron | 35.0% | |
| TTGTGACACATAGTAGGAAA+AGG | + | tig0018045:58819-58838 | None:intergenic | 35.0% | |
| TGTAAGTTGTGACACATAGT+AGG | + | tig0018045:58825-58844 | None:intergenic | 35.0% | |
| ! | GTAATGGCTAAGTTCTAGTA+TGG | + | tig0018045:58944-58963 | None:intergenic | 35.0% |
| TGTTAATATCACACATGCAG+TGG | - | tig0018045:59050-59069 | Msa1363640:CDS | 35.0% | |
| GTTAATATCACACATGCAGT+GGG | - | tig0018045:59051-59070 | Msa1363640:CDS | 35.0% | |
| ! | CTCAATCTTTTCTGCGTTTT+GGG | - | tig0018045:59114-59133 | Msa1363640:CDS | 35.0% |
| TGTTCTCAATATGAGGAAAG+TGG | + | tig0018045:59220-59239 | None:intergenic | 35.0% | |
| CTTACATCAAACAAGTATGC+AGG | - | tig0018045:59299-59318 | Msa1363640:CDS | 35.0% | |
| TTGGTCCTTCAGCTTAAAAT+CGG | - | tig0018045:59459-59478 | Msa1363640:intron | 35.0% | |
| ! | AATGAGGAAATTAGGGCATT+AGG | + | tig0018045:59489-59508 | None:intergenic | 35.0% |
| TACACAGACAAGAATGAATG+AGG | + | tig0018045:59505-59524 | None:intergenic | 35.0% | |
| TGATTACAGTAGCTGAAACA+CGG | - | tig0018045:59528-59547 | Msa1363640:intron | 35.0% | |
| GTACCCAATGTTATGAATGA+CGG | - | tig0018045:59687-59706 | Msa1363640:intron | 35.0% | |
| !! | AATGACGGATTAGCAGTTTA+TGG | - | tig0018045:59702-59721 | Msa1363640:intron | 35.0% |
| ATGCTCTCATAAATTGCCTA+TGG | - | tig0018045:59789-59808 | Msa1363640:intron | 35.0% | |
| TGCTCTCATAAATTGCCTAT+GGG | - | tig0018045:59790-59809 | Msa1363640:intron | 35.0% | |
| TAACCGTGAAAAAGGATGAA+GGG | + | tig0018045:60117-60136 | None:intergenic | 35.0% | |
| TTAACCGTGAAAAAGGATGA+AGG | + | tig0018045:60118-60137 | None:intergenic | 35.0% | |
| TCTTCTCTTAACCGTGAAAA+AGG | + | tig0018045:60125-60144 | None:intergenic | 35.0% | |
| ACTGAGAAGAAGTGAATGAA+AGG | - | tig0018045:60190-60209 | Msa1363640:intron | 35.0% | |
| ! | ACTCTCGGGTTGTTTAAATA+TGG | + | tig0018045:60292-60311 | None:intergenic | 35.0% |
| ! | TAAACAACCCGAGAGTATAA+TGG | - | tig0018045:60296-60315 | Msa1363640:intron | 35.0% |
| ! | AAACAACCCGAGAGTATAAT+GGG | - | tig0018045:60297-60316 | Msa1363640:intron | 35.0% |
| TTTAAGCCCATTATACTCTC+GGG | + | tig0018045:60306-60325 | None:intergenic | 35.0% | |
| CTAATTAGGCTCACAAAATC+AGG | + | tig0018045:60732-60751 | None:intergenic | 35.0% | |
| TAACTGTAGGACGGAAAATA+TGG | - | tig0018045:60764-60783 | Msa1363640:intron | 35.0% | |
| ! | GTTTCACTAGTTTGTGTGTT+GGG | + | tig0018045:60964-60983 | None:intergenic | 35.0% |
| ! | AGTTTCACTAGTTTGTGTGT+TGG | + | tig0018045:60965-60984 | None:intergenic | 35.0% |
| ! | GTGGTCAAGTTTATGTTTTC+TGG | - | tig0018045:60999-61018 | Msa1363640:intron | 35.0% |
| AATTGTTTGGTATCTCCTTC+TGG | - | tig0018045:61110-61129 | Msa1363640:intron | 35.0% | |
| ATTGTTTGGTATCTCCTTCT+GGG | - | tig0018045:61111-61130 | Msa1363640:intron | 35.0% | |
| ACACTAATGACAAAAACAGG+AGG | + | tig0018045:61146-61165 | None:intergenic | 35.0% | |
| !! | ATCTGCTGTCTGAGTTTTAA+AGG | + | tig0018045:61370-61389 | None:intergenic | 35.0% |
| CCTTTATATGTGAAGAGTTG+GGG | - | tig0018045:61553-61572 | Msa1363640:intron | 35.0% | |
| ACTTAATGCAGAGATACACT+TGG | + | tig0018045:61692-61711 | None:intergenic | 35.0% | |
| ! | TCACTACTTTCAAAAAGTGC+TGG | + | tig0018045:61867-61886 | None:intergenic | 35.0% |
| ! | GATTTTGTAATGTGGCAGTA+AGG | - | tig0018045:61908-61927 | Msa1363640:intron | 35.0% |
| TTGCGTAAGTTATAATCGAG+AGG | + | tig0018045:62017-62036 | None:intergenic | 35.0% | |
| CTCGATTATAACTTACGCAA+TGG | - | tig0018045:62017-62036 | Msa1363640:intron | 35.0% | |
| !! | TTATGGTCCATTTGGGTTTT+TGG | - | tig0018045:62310-62329 | Msa1363640:CDS | 35.0% |
| ! | AAAGCATCCAAAAACCCAAA+TGG | + | tig0018045:62320-62339 | None:intergenic | 35.0% |
| ! | GTGGTATTTGGGGTAAATTT+AGG | + | tig0018045:62347-62366 | None:intergenic | 35.0% |
| TTCTCCTATAAAGAGGAGTA+GGG | + | tig0018045:62529-62548 | None:intergenic | 35.0% | |
| TTTCTCCTATAAAGAGGAGT+AGG | + | tig0018045:62530-62549 | None:intergenic | 35.0% | |
| GCTGTTTATTATACTTAGGG+AGG | + | tig0018045:62635-62654 | None:intergenic | 35.0% | |
| ! | TGTTTTTCTTTAGTCGTCCA+AGG | - | tig0018045:62865-62884 | Msa1363640:CDS | 35.0% |
| CTCATAGTTTAACTAGCTGA+AGG | - | tig0018045:63013-63032 | Msa1363640:CDS | 35.0% | |
| !! | CTGAAGGCTTTGAATATTAC+TGG | - | tig0018045:63029-63048 | Msa1363640:CDS | 35.0% |
| ACAGACACTGATATATCACA+TGG | + | tig0018045:63128-63147 | None:intergenic | 35.0% | |
| CTGCAACTTATGCATCAAAA+GGG | + | tig0018045:63194-63213 | None:intergenic | 35.0% | |
| ACTGCAACTTATGCATCAAA+AGG | + | tig0018045:63195-63214 | None:intergenic | 35.0% | |
| TGACATCTCTATCATTGCTT+TGG | - | tig0018045:63265-63284 | Msa1363640:CDS | 35.0% | |
| GACATCTCTATCATTGCTTT+GGG | - | tig0018045:63266-63285 | Msa1363640:CDS | 35.0% | |
| AGGATTTACCATATTCATGG+TGG | + | tig0018045:63338-63357 | None:intergenic | 35.0% | |
| TTCCAAATAGCAGCAGAAAT+AGG | - | tig0018045:63575-63594 | Msa1363640:CDS | 35.0% | |
| TTCCATTTATACCCTCGTAG+TGG | - | tig0018045:57882-57901 | Msa1363640:three_prime_UTR | 40.0% | |
| !! | ATGATGGATTCAGCAGAGAA+GGG | - | tig0018045:57927-57946 | Msa1363640:three_prime_UTR | 40.0% |
| TGAGTTACAGAGTCAAGCAA+CGG | + | tig0018045:57963-57982 | None:intergenic | 40.0% | |
| ATGATCCACAACTCGTTGTA+TGG | - | tig0018045:58275-58294 | Msa1363640:intron | 40.0% | |
| GAGAAGAAAAGGGGAAAATC+AGG | + | tig0018045:58454-58473 | None:intergenic | 40.0% | |
| ! | GATTTTCCCCTTTTCTTCTC+TGG | - | tig0018045:58454-58473 | Msa1363640:intron | 40.0% |
| TGATGCACCAGAGAAGAAAA+GGG | + | tig0018045:58464-58483 | None:intergenic | 40.0% | |
| TTGCCTTATGCTCAATGCTA+TGG | - | tig0018045:58499-58518 | Msa1363640:intron | 40.0% | |
| !! | TGCTATGGTGGACATCAATT+TGG | - | tig0018045:58514-58533 | Msa1363640:intron | 40.0% |
| GTGGACATCAATTTGGTATG+TGG | - | tig0018045:58521-58540 | Msa1363640:intron | 40.0% | |
| ATGGTAGAGCAATCACTCTT+GGG | - | tig0018045:58560-58579 | Msa1363640:intron | 40.0% | |
| ATCTCGAGTAACCAACTTTC+CGG | + | tig0018045:58767-58786 | None:intergenic | 40.0% | |
| ! | TGGCTAAGTTCTAGTATGGA+TGG | + | tig0018045:58940-58959 | None:intergenic | 40.0% |
| ! | GCTCAATCTTTTCTGCGTTT+TGG | - | tig0018045:59113-59132 | Msa1363640:CDS | 40.0% |
| CCAAAACACGAACAATTTCC+AGG | + | tig0018045:59178-59197 | None:intergenic | 40.0% | |
| ! | CCTGGAAATTGTTCGTGTTT+TGG | - | tig0018045:59175-59194 | Msa1363640:CDS | 40.0% |
| TGAGAGCTTATCTTTCAGCA+CGG | - | tig0018045:59250-59269 | Msa1363640:CDS | 40.0% | |
| TGAAGAAGATCATTCTGTCG+TGG | - | tig0018045:59274-59293 | Msa1363640:CDS | 40.0% | |
| TGAGAGTGAGTGACAATGTT+TGG | + | tig0018045:59388-59407 | None:intergenic | 40.0% | |
| GATTACAGTAGCTGAAACAC+GGG | - | tig0018045:59529-59548 | Msa1363640:intron | 40.0% | |
| AAAATCCCTTGCCTAGACAA+TGG | - | tig0018045:59656-59675 | Msa1363640:intron | 40.0% | |
| TACTAGTACTGCCATTGTCT+AGG | + | tig0018045:59670-59689 | None:intergenic | 40.0% | |
| GATTAGCAGTTTATGGCAGA+GGG | - | tig0018045:59709-59728 | Msa1363640:intron | 40.0% | |
| ACAATTCAGCCATATAAGCG+TGG | - | tig0018045:59734-59753 | Msa1363640:intron | 40.0% | |
| CAATTCAGCCATATAAGCGT+GGG | - | tig0018045:59735-59754 | Msa1363640:intron | 40.0% | |
| GCTCTCATAAATTGCCTATG+GGG | - | tig0018045:59791-59810 | Msa1363640:intron | 40.0% | |
| ! | CATTTTGTGTCAATCCCCAT+AGG | + | tig0018045:59808-59827 | None:intergenic | 40.0% |
| ! | AAATAGCAATCGTGACGGAA+TGG | + | tig0018045:59838-59857 | None:intergenic | 40.0% |
| !! | CGATTGCTATTTAACAACGC+TGG | - | tig0018045:59846-59865 | Msa1363640:intron | 40.0% |
| ! | GGTAGTTCTGTTGTCAATAG+CGG | - | tig0018045:59867-59886 | Msa1363640:intron | 40.0% |
| !! | GTACCCTTCATCCTTTTTCA+CGG | - | tig0018045:60111-60130 | Msa1363640:intron | 40.0% |
| AAAGGAGATTGTTTATGCGG+CGG | - | tig0018045:60208-60227 | Msa1363640:intron | 40.0% | |
| TCCATGCACAAAATTAGGTC+TGG | - | tig0018045:60232-60251 | Msa1363640:intron | 40.0% | |
| CCATGCACAAAATTAGGTCT+GGG | - | tig0018045:60233-60252 | Msa1363640:intron | 40.0% | |
| CATGCACAAAATTAGGTCTG+GGG | - | tig0018045:60234-60253 | Msa1363640:intron | 40.0% | |
| TAGTCAAGATTTATGTGGGC+TGG | - | tig0018045:60266-60285 | Msa1363640:intron | 40.0% | |
| AATAACCACATCCAAGCACA+AGG | + | tig0018045:60884-60903 | None:intergenic | 40.0% | |
| GCACCTTCTATTTCAGTGTT+TGG | - | tig0018045:61215-61234 | Msa1363640:intron | 40.0% | |
| AGCCAAATGACCCTTCTTTA+CGG | + | tig0018045:61347-61366 | None:intergenic | 40.0% | |
| GGAAAAGTAACTGAATGTCG+TGG | + | tig0018045:61440-61459 | None:intergenic | 40.0% | |
| TTTCCTGCCTAAGACTATGA+AGG | - | tig0018045:61455-61474 | Msa1363640:intron | 40.0% | |
| TATGGAGCCTTCATAGTCTT+AGG | + | tig0018045:61465-61484 | None:intergenic | 40.0% | |
| AAGACTATGAAGGCTCCATA+AGG | - | tig0018045:61465-61484 | Msa1363640:intron | 40.0% | |
| AGACTATGAAGGCTCCATAA+GGG | - | tig0018045:61466-61485 | Msa1363640:intron | 40.0% | |
| ! | TTTCTCAGTCTCCCTGTTTT+GGG | + | tig0018045:61500-61519 | None:intergenic | 40.0% |
| ! | ATTTCTCAGTCTCCCTGTTT+TGG | + | tig0018045:61501-61520 | None:intergenic | 40.0% |
| AAACAGGGAGACTGAGAAAT+TGG | - | tig0018045:61501-61520 | Msa1363640:intron | 40.0% | |
| CCCCAACTCTTCACATATAA+AGG | + | tig0018045:61556-61575 | None:intergenic | 40.0% | |
| TTATATGTGAAGAGTTGGGG+TGG | - | tig0018045:61556-61575 | Msa1363640:intron | 40.0% | |
| ACCATGACAGAGATGATTCT+GGG | + | tig0018045:61618-61637 | None:intergenic | 40.0% | |
| TCCAGTCAATTAAGTTAGCC+AGG | - | tig0018045:61711-61730 | Msa1363640:intron | 40.0% | |
| AACACTAAGAATAACTGGCC+TGG | + | tig0018045:61732-61751 | None:intergenic | 40.0% | |
| AGGCCAGTTATTCTTAGTGT+TGG | - | tig0018045:61731-61750 | Msa1363640:intron | 40.0% | |
| GTATTCTATATCAGCATGGG+CGG | - | tig0018045:62178-62197 | Msa1363640:intron | 40.0% | |
| ! | CTGCTTCCATGATTTCTAGA+TGG | - | tig0018045:62219-62238 | Msa1363640:CDS | 40.0% |
| ! | TTCCATGATTTCTAGATGGC+AGG | - | tig0018045:62223-62242 | Msa1363640:CDS | 40.0% |
| ! | TCCATGATTTCTAGATGGCA+GGG | - | tig0018045:62224-62243 | Msa1363640:CDS | 40.0% |
| TTTGCAAACCAACCTGACAT+TGG | - | tig0018045:62392-62411 | Msa1363640:CDS | 40.0% | |
| AGATTCCACAAACCAATGTC+AGG | + | tig0018045:62407-62426 | None:intergenic | 40.0% | |
| CAAAGAGGCTAACTATGCAT+TGG | - | tig0018045:62472-62491 | Msa1363640:intron | 40.0% | |
| AGGCTAACTATGCATTGGAA+AGG | - | tig0018045:62477-62496 | Msa1363640:intron | 40.0% | |
| TCTCCTATAAAGAGGAGTAG+GGG | + | tig0018045:62528-62547 | None:intergenic | 40.0% | |
| ! | TCTGAAACAGACCAACCATA+AGG | + | tig0018045:62559-62578 | None:intergenic | 40.0% |
| !! | TGGTTGGTCTGTTTCAGATA+TGG | - | tig0018045:62561-62580 | Msa1363640:intron | 40.0% |
| GGCACTAACAATTCATCATC+TGG | + | tig0018045:62753-62772 | None:intergenic | 40.0% | |
| TTCCAAGTAGTGACATGGAT+TGG | - | tig0018045:63055-63074 | Msa1363640:CDS | 40.0% | |
| !! | AGTGACATGGATTGGTCATT+TGG | - | tig0018045:63063-63082 | Msa1363640:CDS | 40.0% |
| ! | GATAGAGATGTCAAAAGCAC+AGG | + | tig0018045:63258-63277 | None:intergenic | 40.0% |
| ! | TTTTTGCAGCTCTCTACAAG+TGG | - | tig0018045:63289-63308 | Msa1363640:intron | 40.0% |
| GCAATTGATGCTGCAGAAAT+CGG | - | tig0018045:63391-63410 | Msa1363640:intron | 40.0% | |
| !! | GTGATTTTGGAGAAGTTCGT+AGG | - | tig0018045:63413-63432 | Msa1363640:intron | 40.0% |
| !! | CTCCTATTTCTGCTGCTATT+TGG | + | tig0018045:63580-63599 | None:intergenic | 40.0% |
| CAATTGTGTCTAACTGGAGA+TGG | + | tig0018045:63718-63737 | None:intergenic | 40.0% | |
| CATCTCCAGTTAGACACAAT+TGG | - | tig0018045:63716-63735 | Msa1363640:CDS | 40.0% | |
| TGCATCCAATTGTGTCTAAC+TGG | + | tig0018045:63724-63743 | None:intergenic | 40.0% | |
| CATGCATAGAAGTTCTCTCA+TGG | + | tig0018045:63815-63834 | None:intergenic | 40.0% | |
| GATACAACGACAACAGACGA+GGG | + | tig0018045:57821-57840 | None:intergenic | 45.0% | |
| ! | TGCCACTACGAGGGTATAAA+TGG | + | tig0018045:57887-57906 | None:intergenic | 45.0% |
| CATCGTTAGATGCAGCATGA+TGG | - | tig0018045:57911-57930 | Msa1363640:three_prime_UTR | 45.0% | |
| !! | CATGATGGATTCAGCAGAGA+AGG | - | tig0018045:57926-57945 | Msa1363640:three_prime_UTR | 45.0% |
| AGAGGGTAAGTCTCTCACAA+AGG | + | tig0018045:58060-58079 | None:intergenic | 45.0% | |
| TGAATGACTCTCACCTCTCT+TGG | + | tig0018045:58104-58123 | None:intergenic | 45.0% | |
| GGATCATCTACTGCAACTGA+TGG | + | tig0018045:58262-58281 | None:intergenic | 45.0% | |
| TCAGACCATACAACGAGTTG+TGG | + | tig0018045:58283-58302 | None:intergenic | 45.0% | |
| CAAGTCAAGTAAGTCGGCAA+CGG | + | tig0018045:58308-58327 | None:intergenic | 45.0% | |
| GATGCACCAGAGAAGAAAAG+GGG | + | tig0018045:58463-58482 | None:intergenic | 45.0% | |
| GTGATGCACCAGAGAAGAAA+AGG | + | tig0018045:58465-58484 | None:intergenic | 45.0% | |
| ! | CCACCATAGCATTGAGCATA+AGG | + | tig0018045:58505-58524 | None:intergenic | 45.0% |
| CCTTATGCTCAATGCTATGG+TGG | - | tig0018045:58502-58521 | Msa1363640:intron | 45.0% | |
| CATCAATTTGGTATGTGGGC+TGG | - | tig0018045:58526-58545 | Msa1363640:intron | 45.0% | |
| GATGGTAGAGCAATCACTCT+TGG | - | tig0018045:58559-58578 | Msa1363640:intron | 45.0% | |
| TGGTAGAGCAATCACTCTTG+GGG | - | tig0018045:58561-58580 | Msa1363640:intron | 45.0% | |
| !! | AGCTACAGCTTAAAGGTGCT+GGG | - | tig0018045:58614-58633 | Msa1363640:intron | 45.0% |
| GATGCATTGCTTCACTGCAA+AGG | + | tig0018045:58702-58721 | None:intergenic | 45.0% | |
| AGTGAAGCAATGCATCACCT+TGG | - | tig0018045:58706-58725 | Msa1363640:intron | 45.0% | |
| GTGAAGCAATGCATCACCTT+GGG | - | tig0018045:58707-58726 | Msa1363640:intron | 45.0% | |
| TGGTGACAAGAGAAAGAGCA+CGG | + | tig0018045:58744-58763 | None:intergenic | 45.0% | |
| TGGGAATCCAAAGGAAGAAC+AGG | - | tig0018045:59070-59089 | Msa1363640:CDS | 45.0% | |
| GGGAATCCAAAGGAAGAACA+GGG | - | tig0018045:59071-59090 | Msa1363640:CDS | 45.0% | |
| ATTGCACCCTGTTCTTCCTT+TGG | + | tig0018045:59080-59099 | None:intergenic | 45.0% | |
| GAGAGCTTATCTTTCAGCAC+GGG | - | tig0018045:59251-59270 | Msa1363640:CDS | 45.0% | |
| GAGTGAGTGACAATGTTTGG+TGG | + | tig0018045:59385-59404 | None:intergenic | 45.0% | |
| !! | GCTGACCGATTTTAAGCTGA+AGG | + | tig0018045:59467-59486 | None:intergenic | 45.0% |
| TACTGCCATTGTCTAGGCAA+GGG | + | tig0018045:59664-59683 | None:intergenic | 45.0% | |
| ! | GGATTAGCAGTTTATGGCAG+AGG | - | tig0018045:59708-59727 | Msa1363640:intron | 45.0% |
| GTTGCAATCCCACGCTTATA+TGG | + | tig0018045:59746-59765 | None:intergenic | 45.0% | |
| !!! | GCGTCGCGTTTTGTCATTTT+TGG | + | tig0018045:59924-59943 | None:intergenic | 45.0% |
| TTTGGAGAAAGTGGGTGAAG+CGG | - | tig0018045:59963-59982 | Msa1363640:intron | 45.0% | |
| AATTGTACGATCGGAACAGC+TGG | - | tig0018045:60064-60083 | Msa1363640:intron | 45.0% | |
| ! | CCCAGACCTAATTTTGTGCA+TGG | + | tig0018045:60236-60255 | None:intergenic | 45.0% |
| TGTATAAACCTACCGTGTGC+AGG | - | tig0018045:61066-61085 | Msa1363640:intron | 45.0% | |
| ATAACAGCCATACCTGCACA+CGG | + | tig0018045:61081-61100 | None:intergenic | 45.0% | |
| TATCTCCTTCTGGGTCTTCA+CGG | - | tig0018045:61120-61139 | Msa1363640:intron | 45.0% | |
| AGGCTATACAGCTTCCAACT+TGG | - | tig0018045:61168-61187 | Msa1363640:intron | 45.0% | |
| GGCTATACAGCTTCCAACTT+GGG | - | tig0018045:61169-61188 | Msa1363640:intron | 45.0% | |
| TATTCCCAGTCAACCCAAGT+TGG | + | tig0018045:61185-61204 | None:intergenic | 45.0% | |
| ATACTCACGTGCCGTAAAGA+AGG | - | tig0018045:61333-61352 | Msa1363640:intron | 45.0% | |
| TACTCACGTGCCGTAAAGAA+GGG | - | tig0018045:61334-61353 | Msa1363640:intron | 45.0% | |
| TGCCGTAAAGAAGGGTCATT+TGG | - | tig0018045:61342-61361 | Msa1363640:intron | 45.0% | |
| ! | TTTGGGCGTTGTTTCCCTTA+TGG | + | tig0018045:61483-61502 | None:intergenic | 45.0% |
| TCTGCACTACCATGCAACAA+GGG | + | tig0018045:61590-61609 | None:intergenic | 45.0% | |
| ATCTGCACTACCATGCAACA+AGG | + | tig0018045:61591-61610 | None:intergenic | 45.0% | |
| ACCCAGAATCATCTCTGTCA+TGG | - | tig0018045:61614-61633 | Msa1363640:intron | 45.0% | |
| GACCATGACAGAGATGATTC+TGG | + | tig0018045:61619-61638 | None:intergenic | 45.0% | |
| GAATCATCTCTGTCATGGTC+AGG | - | tig0018045:61619-61638 | Msa1363640:intron | 45.0% | |
| GCCTGGCTAACTTAATTGAC+TGG | + | tig0018045:61715-61734 | None:intergenic | 45.0% | |
| !! | TCCAAGCAATAGGGTTGGTT+TGG | - | tig0018045:61775-61794 | Msa1363640:intron | 45.0% |
| ACCAAACCAACCCTATTGCT+TGG | + | tig0018045:61779-61798 | None:intergenic | 45.0% | |
| !! | AAGCAATAGGGTTGGTTTGG+TGG | - | tig0018045:61778-61797 | Msa1363640:intron | 45.0% |
| CTTGGTCAAGTAGGCCTATA+TGG | - | tig0018045:61813-61832 | Msa1363640:intron | 45.0% | |
| ! | CCATGATTTCTAGATGGCAG+GGG | - | tig0018045:62225-62244 | Msa1363640:CDS | 45.0% |
| ! | CATGATTTCTAGATGGCAGG+GGG | - | tig0018045:62226-62245 | Msa1363640:CDS | 45.0% |
| TGGAAGGTCTGTGGTATTTG+GGG | + | tig0018045:62357-62376 | None:intergenic | 45.0% | |
| CTGGAAGGTCTGTGGTATTT+GGG | + | tig0018045:62358-62377 | None:intergenic | 45.0% | |
| AACAGTACCTTCTACCTGGA+AGG | + | tig0018045:62373-62392 | None:intergenic | 45.0% | |
| GCAAAACAGTACCTTCTACC+TGG | + | tig0018045:62377-62396 | None:intergenic | 45.0% | |
| !! | ACCAACCTGACATTGGTTTG+TGG | - | tig0018045:62399-62418 | Msa1363640:CDS | 45.0% |
| TCCACAAACCAATGTCAGGT+TGG | + | tig0018045:62403-62422 | None:intergenic | 45.0% | |
| CTATAAAGAGGAGTAGGGGA+AGG | + | tig0018045:62524-62543 | None:intergenic | 45.0% | |
| CTTCCCCTACTCCTCTTTAT+AGG | - | tig0018045:62522-62541 | Msa1363640:intron | 45.0% | |
| ! | GTAAAGAAGCGTGGACAAGT+TGG | - | tig0018045:62808-62827 | Msa1363640:CDS | 45.0% |
| GGTCTTTCCAAGTAGTGACA+TGG | - | tig0018045:63050-63069 | Msa1363640:CDS | 45.0% | |
| GACCAATCCATGTCACTACT+TGG | + | tig0018045:63060-63079 | None:intergenic | 45.0% | |
| GTGGCATTTCTGATGATCAG+AGG | - | tig0018045:63308-63327 | Msa1363640:intron | 45.0% | |
| GAGGAAGACCACCATGAATA+TGG | - | tig0018045:63327-63346 | Msa1363640:intron | 45.0% | |
| ! | GCTGCAGAAATCGGTGATTT+TGG | - | tig0018045:63400-63419 | Msa1363640:intron | 45.0% |
| ATTCCTGGCTGCTCATCAAA+AGG | + | tig0018045:63460-63479 | None:intergenic | 45.0% | |
| ! | TTTTGATGAGCAGCCAGGAA+TGG | - | tig0018045:63459-63478 | Msa1363640:CDS | 45.0% |
| ! | CGAGCATACTTTTCCATTCC+TGG | + | tig0018045:63475-63494 | None:intergenic | 45.0% |
| ! | CAAGAAAGCATGCATACACC+TGG | + | tig0018045:63523-63542 | None:intergenic | 45.0% |
| AGCAGCAGAAATAGGAGAGA+AGG | - | tig0018045:63583-63602 | Msa1363640:CDS | 45.0% | |
| !! | ATAATGATTATAAAAAATAA+TGG | - | tig0018045:60472-60491 | Msa1363640:intron | 5.0% |
| !! | ATATATGAAAATAAATATAT+CGG | + | tig0018045:63861-63880 | None:intergenic | 5.0% |
| CATCAAATCTTCGGTCGGGT+GGG | + | tig0018045:57724-57743 | None:intergenic | 50.0% | |
| TCATCAAATCTTCGGTCGGG+TGG | + | tig0018045:57725-57744 | None:intergenic | 50.0% | |
| GGATACAACGACAACAGACG+AGG | + | tig0018045:57822-57841 | None:intergenic | 50.0% | |
| TTATACCCTCGTAGTGGCAG+TGG | - | tig0018045:57888-57907 | Msa1363640:three_prime_UTR | 50.0% | |
| ! | GGATCGGTTCTTGGATCAGA+GGG | + | tig0018045:58077-58096 | None:intergenic | 50.0% |
| ACTCTCACCTCTCTTGGAAG+GGG | + | tig0018045:58098-58117 | None:intergenic | 50.0% | |
| GACTCTCACCTCTCTTGGAA+GGG | + | tig0018045:58099-58118 | None:intergenic | 50.0% | |
| TGACTCTCACCTCTCTTGGA+AGG | + | tig0018045:58100-58119 | None:intergenic | 50.0% | |
| !! | CGTTGCCGACTTACTTGACT+TGG | - | tig0018045:58306-58325 | Msa1363640:intron | 50.0% |
| TCTGGTGCATCACCTTTGCT+TGG | - | tig0018045:58472-58491 | Msa1363640:intron | 50.0% | |
| TAAGGCAACGCTCCAAGCAA+AGG | + | tig0018045:58487-58506 | None:intergenic | 50.0% | |
| TTGCTCTACCATCACCCAAC+TGG | + | tig0018045:58552-58571 | None:intergenic | 50.0% | |
| AGGTGGGAGCTACAGCTTAA+AGG | - | tig0018045:58607-58626 | Msa1363640:intron | 50.0% | |
| ! | GAGCTACAGCTTAAAGGTGC+TGG | - | tig0018045:58613-58632 | Msa1363640:intron | 50.0% |
| ACGTAGCACTGCAAGACCAT+CGG | + | tig0018045:58662-58681 | None:intergenic | 50.0% | |
| AGTGCTACGTAGCAGCATCA+GGG | - | tig0018045:58672-58691 | Msa1363640:intron | 50.0% | |
| ! | AGAGAAAGAGCACGGGTTGT+TGG | + | tig0018045:58736-58755 | None:intergenic | 50.0% |
| ! | GGTGACAAGAGAAAGAGCAC+GGG | + | tig0018045:58743-58762 | None:intergenic | 50.0% |
| GCTCTTTCTCTTGTCACCAC+CGG | - | tig0018045:58745-58764 | Msa1363640:intron | 50.0% | |
| TCTTGTCACCACCGGAAAGT+TGG | - | tig0018045:58753-58772 | Msa1363640:intron | 50.0% | |
| TCGAGTAACCAACTTTCCGG+TGG | + | tig0018045:58764-58783 | None:intergenic | 50.0% | |
| CACATGCAGTGGGAATCCAA+AGG | - | tig0018045:59061-59080 | Msa1363640:CDS | 50.0% | |
| TACCAACTACATGCCTCCAG+AGG | - | tig0018045:59140-59159 | Msa1363640:CDS | 50.0% | |
| ! | TACCTCTGGAGGCATGTAGT+TGG | + | tig0018045:59145-59164 | None:intergenic | 50.0% |
| TGCCTCCAGAGGTAGTAATG+AGG | - | tig0018045:59151-59170 | Msa1363640:CDS | 50.0% | |
| GTCCTCATTACTACCTCTGG+AGG | + | tig0018045:59156-59175 | None:intergenic | 50.0% | |
| CAGGTCCTCATTACTACCTC+TGG | + | tig0018045:59159-59178 | None:intergenic | 50.0% | |
| CAGAGGTAGTAATGAGGACC+TGG | - | tig0018045:59157-59176 | Msa1363640:CDS | 50.0% | |
| GTACTGCCATTGTCTAGGCA+AGG | + | tig0018045:59665-59684 | None:intergenic | 50.0% | |
| !! | GAGAGCATCACCTGCCATTA+CGG | + | tig0018045:59777-59796 | None:intergenic | 50.0% |
| TTGTCAATAGCGGCTGCTAC+CGG | - | tig0018045:59877-59896 | Msa1363640:intron | 50.0% | |
| TGGCCAAATTCGGGTCAAAG+CGG | - | tig0018045:60007-60026 | Msa1363640:intron | 50.0% | |
| CAGCTGGATCTGAGTTTACG+CGG | - | tig0018045:60080-60099 | Msa1363640:intron | 50.0% | |
| AGCTGGATCTGAGTTTACGC+GGG | - | tig0018045:60081-60100 | Msa1363640:intron | 50.0% | |
| GCGGCTCCATGCACAAAATT+AGG | - | tig0018045:60227-60246 | Msa1363640:intron | 50.0% | |
| ACCAGCGTCTGTTGTCAATG+CGG | + | tig0018045:60705-60724 | None:intergenic | 50.0% | |
| TTCCTTGCACACCTTGTGCT+TGG | - | tig0018045:60870-60889 | Msa1363640:intron | 50.0% | |
| ATCCAAGCACAAGGTGTGCA+AGG | + | tig0018045:60875-60894 | None:intergenic | 50.0% | |
| AAACCTACCGTGTGCAGGTA+TGG | - | tig0018045:61071-61090 | Msa1363640:intron | 50.0% | |
| !! | AGCTTCCAACTTGGGTTGAC+TGG | - | tig0018045:61177-61196 | Msa1363640:intron | 50.0% |
| !! | GCTTCCAACTTGGGTTGACT+GGG | - | tig0018045:61178-61197 | Msa1363640:intron | 50.0% |
| ! | GAGCCTTCATAGTCTTAGGC+AGG | + | tig0018045:61461-61480 | None:intergenic | 50.0% |
| AGGGAAACAACGCCCAAAAC+AGG | - | tig0018045:61485-61504 | Msa1363640:intron | 50.0% | |
| GGGAAACAACGCCCAAAACA+GGG | - | tig0018045:61486-61505 | Msa1363640:intron | 50.0% | |
| GCATTGTTCCCCTTGTTGCA+TGG | - | tig0018045:61578-61597 | Msa1363640:intron | 50.0% | |
| CTGCACTACCATGCAACAAG+GGG | + | tig0018045:61589-61608 | None:intergenic | 50.0% | |
| ! | AGTGTTGGATACGGGTAACC+TGG | - | tig0018045:61746-61765 | Msa1363640:intron | 50.0% |
| TTGGATACGGGTAACCTGGA+TGG | - | tig0018045:61750-61769 | Msa1363640:intron | 50.0% | |
| TGGATACGGGTAACCTGGAT+GGG | - | tig0018045:61751-61770 | Msa1363640:intron | 50.0% | |
| TGGATGGGGTCCAAGCAATA+GGG | - | tig0018045:61766-61785 | Msa1363640:intron | 50.0% | |
| !! | AATAGGGTTGGTTTGGTGGC+AGG | - | tig0018045:61782-61801 | Msa1363640:intron | 50.0% |
| !! | TTGGTTTGGTGGCAGGATGT+TGG | - | tig0018045:61789-61808 | Msa1363640:intron | 50.0% |
| !! | TGGTTTGGTGGCAGGATGTT+GGG | - | tig0018045:61790-61809 | Msa1363640:intron | 50.0% |
| ! | GATGTTGGGCTTGGTCAAGT+AGG | - | tig0018045:61804-61823 | Msa1363640:intron | 50.0% |
| CCCCTGCCATCTAGAAATCA+TGG | + | tig0018045:62228-62247 | None:intergenic | 50.0% | |
| ! | ATTTCTAGATGGCAGGGGGT+TGG | - | tig0018045:62230-62249 | Msa1363640:CDS | 50.0% |
| CCTGGAAGGTCTGTGGTATT+TGG | + | tig0018045:62359-62378 | None:intergenic | 50.0% | |
| CCAAATACCACAGACCTTCC+AGG | - | tig0018045:62356-62375 | Msa1363640:CDS | 50.0% | |
| ! | CTTAGGGAGGCCAAGCTTTT+TGG | + | tig0018045:62622-62641 | None:intergenic | 50.0% |
| ! | GTCAAGAGCGTAAAGAAGCG+TGG | - | tig0018045:62799-62818 | Msa1363640:CDS | 50.0% |
| ! | GTCAAAAGCACAGGCCATCT+TGG | + | tig0018045:63249-63268 | None:intergenic | 50.0% |
| CTGCAGCATCAATTGCAGTC+TGG | + | tig0018045:63387-63406 | None:intergenic | 50.0% | |
| ! | CATCCTTTTGATGAGCAGCC+AGG | - | tig0018045:63454-63473 | Msa1363640:CDS | 50.0% |
| TCCTCATGAGTTGCCTGCTT+AGG | - | tig0018045:63544-63563 | Msa1363640:CDS | 50.0% | |
| ACCTAAGCAGGCAACTCATG+AGG | + | tig0018045:63548-63567 | None:intergenic | 50.0% | |
| CATGAGTTGCCTGCTTAGGT+AGG | - | tig0018045:63548-63567 | Msa1363640:CDS | 50.0% | |
| TGGAATACGCCTACCTAAGC+AGG | + | tig0018045:63560-63579 | None:intergenic | 50.0% | |
| AAATCTTCGGTCGGGTGGGT+GGG | + | tig0018045:57720-57739 | None:intergenic | 55.0% | |
| ! | GGGATCGGTTCTTGGATCAG+AGG | + | tig0018045:58078-58097 | None:intergenic | 55.0% |
| ! | CTTGGAAGGGGATCGGTTCT+TGG | + | tig0018045:58086-58105 | None:intergenic | 55.0% |
| AACCGATCCCCTTCCAAGAG+AGG | - | tig0018045:58088-58107 | Msa1363640:CDS | 55.0% | |
| CACCTCTCTTGGAAGGGGAT+CGG | + | tig0018045:58093-58112 | None:intergenic | 55.0% | |
| CCATCGGCAAAGCGACTGTA+AGG | + | tig0018045:58646-58665 | None:intergenic | 55.0% | |
| ! | CCTTACAGTCGCTTTGCCGA+TGG | - | tig0018045:58643-58662 | Msa1363640:intron | 55.0% |
| CAGTGCTACGTAGCAGCATC+AGG | - | tig0018045:58671-58690 | Msa1363640:intron | 55.0% | |
| ! | CACGGGTTGTTGGAATCCCA+AGG | + | tig0018045:58726-58745 | None:intergenic | 55.0% |
| AAGCGTGGGATTGCAACCTG+TGG | - | tig0018045:59749-59768 | Msa1363640:intron | 55.0% | |
| TGCAACCTGTGGCACCGTAA+TGG | - | tig0018045:59760-59779 | Msa1363640:intron | 55.0% | |
| ! | GCGGAGCGTTTGGAGAAAGT+GGG | - | tig0018045:59955-59974 | Msa1363640:intron | 55.0% |
| TGGGTGAAGCGGCCGATATT+CGG | - | tig0018045:59974-59993 | Msa1363640:intron | 55.0% | |
| CACCCTGCTCCACCGAATAT+CGG | + | tig0018045:59989-60008 | None:intergenic | 55.0% | |
| TGGAGCAGGGTGGCCAAATT+CGG | - | tig0018045:59997-60016 | Msa1363640:intron | 55.0% | |
| GGCCAACCCAAATATTGGCG+CGG | + | tig0018045:60671-60690 | None:intergenic | 55.0% | |
| AGCGCGGCCAACCCAAATAT+TGG | + | tig0018045:60676-60695 | None:intergenic | 55.0% | |
| GTCAATGCGGAAATGCAGCG+CGG | + | tig0018045:60692-60711 | None:intergenic | 55.0% | |
| ! | TCCGCATTGACAACAGACGC+TGG | - | tig0018045:60701-60720 | Msa1363640:intron | 55.0% |
| GCACACCTTGTGCTTGGATG+TGG | - | tig0018045:60876-60895 | Msa1363640:intron | 55.0% | |
| GGATACGGGTAACCTGGATG+GGG | - | tig0018045:61752-61771 | Msa1363640:intron | 55.0% | |
| CTATTGCTTGGACCCCATCC+AGG | + | tig0018045:61767-61786 | None:intergenic | 55.0% | |
| CTGGATGGGGTCCAAGCAAT+AGG | - | tig0018045:61765-61784 | Msa1363640:intron | 55.0% | |
| TGGGGTCCAAGCAATAGGGT+TGG | - | tig0018045:61770-61789 | Msa1363640:intron | 55.0% | |
| !! | CAGGGGGTTGGTTTCACTCA+TGG | - | tig0018045:62242-62261 | Msa1363640:CDS | 55.0% |
| CCTTCTACCTGGAAGGTCTG+TGG | + | tig0018045:62366-62385 | None:intergenic | 55.0% | |
| CCACAGACCTTCCAGGTAGA+AGG | - | tig0018045:62363-62382 | Msa1363640:CDS | 55.0% | |
| TGGTCGATATGCCCATGCTG+GGG | + | tig0018045:63503-63522 | None:intergenic | 55.0% | |
| CTGGTCGATATGCCCATGCT+GGG | + | tig0018045:63504-63523 | None:intergenic | 55.0% | |
| CAAATCTTCGGTCGGGTGGG+TGG | + | tig0018045:57721-57740 | None:intergenic | 60.0% | |
| CCAAACTCACTCCTCCGACG+CGG | - | tig0018045:57840-57859 | Msa1363640:three_prime_UTR | 60.0% | |
| CGATGCCACTGCCACTACGA+GGG | + | tig0018045:57896-57915 | None:intergenic | 60.0% | |
| ACGATGCCACTGCCACTACG+AGG | + | tig0018045:57897-57916 | None:intergenic | 60.0% | |
| !! | TGGTATGTGGGCTGGCCAGT+TGG | - | tig0018045:58534-58553 | Msa1363640:intron | 60.0% |
| !! | GGTATGTGGGCTGGCCAGTT+GGG | - | tig0018045:58535-58554 | Msa1363640:intron | 60.0% |
| ACCTGTGGCACCGTAATGGC+AGG | - | tig0018045:59764-59783 | Msa1363640:intron | 60.0% | |
| !! | ACCTGCCATTACGGTGCCAC+AGG | + | tig0018045:59768-59787 | None:intergenic | 60.0% |
| AAACGCGACGCAGCGCTACA+AGG | - | tig0018045:59933-59952 | Msa1363640:intron | 60.0% | |
| ! | GGCGGAGCGTTTGGAGAAAG+TGG | - | tig0018045:59954-59973 | Msa1363640:intron | 60.0% |
| GTGAAGCGGCCGATATTCGG+TGG | - | tig0018045:59977-59996 | Msa1363640:intron | 60.0% | |
| ! | GGCCGATATTCGGTGGAGCA+GGG | - | tig0018045:59984-60003 | Msa1363640:intron | 60.0% |
| ! | CGATATTCGGTGGAGCAGGG+TGG | - | tig0018045:59987-60006 | Msa1363640:intron | 60.0% |
| GGAGCAGGGTGGCCAAATTC+GGG | - | tig0018045:59998-60017 | Msa1363640:intron | 60.0% | |
| ! | CGGCCGCTTTGACCCGAATT+TGG | + | tig0018045:60013-60032 | None:intergenic | 60.0% |
| !!! | CGTAGCGGGCGCTATTTTGG+CGG | + | tig0018045:60634-60653 | None:intergenic | 60.0% |
| !!! | GTGCGTAGCGGGCGCTATTT+TGG | + | tig0018045:60637-60656 | None:intergenic | 60.0% |
| ACCCAAATATTGGCGCGGCG+CGG | + | tig0018045:60666-60685 | None:intergenic | 60.0% | |
| CGCCGCGCCAATATTTGGGT+TGG | - | tig0018045:60666-60685 | Msa1363640:intron | 60.0% | |
| CAGCCATACCTGCACACGGT+AGG | + | tig0018045:61077-61096 | None:intergenic | 60.0% | |
| TGGTGGCAGGATGTTGGGCT+TGG | - | tig0018045:61795-61814 | Msa1363640:intron | 60.0% | |
| ATGCTCGCTTACCCCCAGCA+TGG | - | tig0018045:63488-63507 | Msa1363640:CDS | 60.0% | |
| TGCTCGCTTACCCCCAGCAT+GGG | - | tig0018045:63489-63508 | Msa1363640:CDS | 60.0% | |
| GGTCGATATGCCCATGCTGG+GGG | + | tig0018045:63502-63521 | None:intergenic | 60.0% | |
| CCTGGTCGATATGCCCATGC+TGG | + | tig0018045:63505-63524 | None:intergenic | 60.0% | |
| CCAGCATGGGCATATCGACC+AGG | - | tig0018045:63502-63521 | Msa1363640:CDS | 60.0% | |
| CCGCGTCGGAGGAGTGAGTT+TGG | + | tig0018045:57843-57862 | None:intergenic | 65.0% | |
| AACTCACTCCTCCGACGCGG+CGG | - | tig0018045:57843-57862 | Msa1363640:three_prime_UTR | 65.0% | |
| !! | TGGGCTGGCCAGTTGGGTGA+TGG | - | tig0018045:58541-58560 | Msa1363640:intron | 65.0% |
| ! | GCGCTACAAGGCGGAGCGTT+TGG | - | tig0018045:59945-59964 | Msa1363640:intron | 65.0% |
| ! | CGGCCGATATTCGGTGGAGC+AGG | - | tig0018045:59983-60002 | Msa1363640:intron | 65.0% |
| !!! | CGGGCGCTATTTTGGCGGTG+CGG | + | tig0018045:60629-60648 | None:intergenic | 65.0% |
| TCCCGCGCCGCGCCAATATT+TGG | - | tig0018045:60661-60680 | Msa1363640:intron | 65.0% | |
| CCCAAATATTGGCGCGGCGC+GGG | + | tig0018045:60665-60684 | None:intergenic | 65.0% | |
| CCCGCGCCGCGCCAATATTT+GGG | - | tig0018045:60662-60681 | Msa1363640:intron | 65.0% | |
| GGAGGCCGTGAAGACCCAGA+AGG | + | tig0018045:61128-61147 | None:intergenic | 65.0% | |
| TTATGCCACCGCCGCCGCGT+CGG | + | tig0018045:57857-57876 | None:intergenic | 70.0% | |
| GGCTGCTACCGGCGCTATCG+TGG | - | tig0018045:59888-59907 | Msa1363640:intron | 70.0% | |
| CTACCGGCGCTATCGTGGCG+CGG | - | tig0018045:59893-59912 | Msa1363640:intron | 70.0% | |
| ACTCCGCGCCACGATAGCGC+CGG | + | tig0018045:59899-59918 | None:intergenic | 70.0% | |
| CGCGACGCAGCGCTACAAGG+CGG | - | tig0018045:59936-59955 | Msa1363640:intron | 70.0% | |
| ATATTGGCGCGGCGCGGGAG+CGG | + | tig0018045:60660-60679 | None:intergenic | 70.0% | |
| TCACTCCTCCGACGCGGCGG+CGG | - | tig0018045:57846-57865 | Msa1363640:three_prime_UTR | 75.0% | |
| GACGCGGCGGCGGTGGCATA+AGG | - | tig0018045:57856-57875 | Msa1363640:three_prime_UTR | 75.0% | |
| GGCGCTATCGTGGCGCGGAG+TGG | - | tig0018045:59898-59917 | Msa1363640:intron | 75.0% | |
| TATTGGCGCGGCGCGGGAGC+GGG | + | tig0018045:60659-60678 | None:intergenic | 75.0% | |
| ! | CGCGGGAGCGGGTGCGTAGC+GGG | + | tig0018045:60648-60667 | None:intergenic | 80.0% |
| ! | GCGCGGGAGCGGGTGCGTAG+CGG | + | tig0018045:60649-60668 | None:intergenic | 80.0% |
| ! | CTCCTCCGACGCGGCGGCGG+TGG | - | tig0018045:57849-57868 | Msa1363640:three_prime_UTR | 85.0% |
| ! | TGCCACCGCCGCCGCGTCGG+AGG | + | tig0018045:57854-57873 | None:intergenic | 85.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| tig0018045 | gene | 57645 | 63883 | 57645 | ID=Msa1363640;Name=Msa1363640 |
| tig0018045 | mRNA | 57645 | 63883 | 57645 | ID=Msa1363640-mRNA-1;Parent=Msa1363640;Name=Msa1363640-mRNA-1;_AED=0.06;_eAED=0.06;_QI=141|0.83|0.85|1|1|1|7|331|572 |
| tig0018045 | exon | 57645 | 58230 | 57645 | ID=Msa1363640-mRNA-1:exon:13648;Parent=Msa1363640-mRNA-1 |
| tig0018045 | exon | 58836 | 58950 | 58836 | ID=Msa1363640-mRNA-1:exon:13647;Parent=Msa1363640-mRNA-1 |
| tig0018045 | exon | 59030 | 59336 | 59030 | ID=Msa1363640-mRNA-1:exon:13646;Parent=Msa1363640-mRNA-1 |
| tig0018045 | exon | 62208 | 62458 | 62208 | ID=Msa1363640-mRNA-1:exon:13645;Parent=Msa1363640-mRNA-1 |
| tig0018045 | exon | 62731 | 63087 | 62731 | ID=Msa1363640-mRNA-1:exon:13644;Parent=Msa1363640-mRNA-1 |
| tig0018045 | exon | 63190 | 63299 | 63190 | ID=Msa1363640-mRNA-1:exon:13643;Parent=Msa1363640-mRNA-1 |
| tig0018045 | exon | 63419 | 63883 | 63419 | ID=Msa1363640-mRNA-1:exon:13642;Parent=Msa1363640-mRNA-1 |
| tig0018045 | five_prime_UTR | 63743 | 63883 | 63743 | ID=Msa1363640-mRNA-1:five_prime_utr;Parent=Msa1363640-mRNA-1 |
| tig0018045 | CDS | 63419 | 63742 | 63419 | ID=Msa1363640-mRNA-1:cds;Parent=Msa1363640-mRNA-1 |
| tig0018045 | CDS | 63190 | 63299 | 63190 | ID=Msa1363640-mRNA-1:cds;Parent=Msa1363640-mRNA-1 |
| tig0018045 | CDS | 62731 | 63087 | 62731 | ID=Msa1363640-mRNA-1:cds;Parent=Msa1363640-mRNA-1 |
| tig0018045 | CDS | 62208 | 62458 | 62208 | ID=Msa1363640-mRNA-1:cds;Parent=Msa1363640-mRNA-1 |
| tig0018045 | CDS | 59030 | 59336 | 59030 | ID=Msa1363640-mRNA-1:cds;Parent=Msa1363640-mRNA-1 |
| tig0018045 | CDS | 58836 | 58950 | 58836 | ID=Msa1363640-mRNA-1:cds;Parent=Msa1363640-mRNA-1 |
| tig0018045 | CDS | 57976 | 58230 | 57976 | ID=Msa1363640-mRNA-1:cds;Parent=Msa1363640-mRNA-1 |
| tig0018045 | three_prime_UTR | 57645 | 57975 | 57645 | ID=Msa1363640-mRNA-1:three_prime_utr;Parent=Msa1363640-mRNA-1 |
| Gene Sequence |
| Protein sequence |
