Alfalfa Gene Editing Database
Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
Msa0309060 | XP_003592934.2 | 89.868 | 227 | 16 | 2 | 1 | 224 | 1 | 223 | 9.36e-139 | 397 |
Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
Msa0309060 | sp|Q93W20|NIFU2_ARATH | 80.000 | 175 | 35 | 0 | 50 | 224 | 61 | 235 | 1.40e-97 | 286 |
Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
Msa0309060 | G7IN99 | 89.868 | 227 | 16 | 2 | 1 | 224 | 1 | 223 | 4.47e-139 | 397 |
Gene ID | Type | Classification |
---|
Gene ID | Type | Classification |
---|
Co-expression Network
Gene1 | Gene2 | correlation coefficient | p_value | FDR |
---|---|---|---|---|
Msa0005160 | Msa0309060 | 0.834345 | 3.163075e-56 | -8.615850e-47 |
Msa0006820 | Msa0309060 | 0.849240 | 3.672384e-60 | -8.615850e-47 |
Msa0008850 | Msa0309060 | 0.817003 | 4.130843e-52 | -8.615850e-47 |
Msa0018470 | Msa0309060 | 0.804058 | 2.591396e-49 | -8.615850e-47 |
Msa0032450 | Msa0309060 | 0.808191 | 3.496329e-50 | -8.615850e-47 |
Msa0033930 | Msa0309060 | 0.828305 | 9.681992e-55 | -8.615850e-47 |
Msa0039200 | Msa0309060 | 0.834425 | 3.020346e-56 | -8.615850e-47 |
Msa0039920 | Msa0309060 | 0.835671 | 1.465222e-56 | -8.615850e-47 |
Msa0040090 | Msa0309060 | 0.845234 | 4.611983e-59 | -8.615850e-47 |
Msa0041780 | Msa0309060 | 0.824710 | 6.964637e-54 | -8.615850e-47 |
Msa0047470 | Msa0309060 | 0.834939 | 2.241948e-56 | -8.615850e-47 |
Msa0050500 | Msa0309060 | 0.841836 | 3.731715e-58 | -8.615850e-47 |
Msa0053210 | Msa0309060 | 0.805865 | 1.086130e-49 | -8.615850e-47 |
Msa0057740 | Msa0309060 | 0.850475 | 1.658173e-60 | -8.615850e-47 |
Msa0080620 | Msa0309060 | 0.819851 | 9.347148e-53 | -8.615850e-47 |
Msa0086820 | Msa0309060 | 0.830395 | 3.009335e-55 | -8.615850e-47 |
Msa0087580 | Msa0309060 | 0.848710 | 5.151490e-60 | -8.615850e-47 |
Msa0087780 | Msa0309060 | 0.858887 | 6.051214e-63 | -8.615850e-47 |
Msa0087790 | Msa0309060 | 0.845087 | 5.053920e-59 | -8.615850e-47 |
Msa0096020 | Msa0309060 | 0.813050 | 3.114740e-51 | -8.615850e-47 |
Msa0096570 | Msa0309060 | 0.828587 | 8.276845e-55 | -8.615850e-47 |
Msa0098700 | Msa0309060 | 0.807687 | 4.474554e-50 | -8.615850e-47 |
Msa0100250 | Msa0309060 | 0.835518 | 1.601858e-56 | -8.615850e-47 |
Msa0100910 | Msa0309060 | 0.815601 | 8.505199e-52 | -8.615850e-47 |
Msa0102130 | Msa0309060 | 0.813238 | 2.832056e-51 | -8.615850e-47 |
Msa0103060 | Msa0309060 | 0.846588 | 1.976954e-59 | -8.615850e-47 |
Msa0116950 | Msa0309060 | 0.802994 | 4.306473e-49 | -8.615850e-47 |
Msa0117300 | Msa0309060 | 0.825499 | 4.533909e-54 | -8.615850e-47 |
Msa0131090 | Msa0309060 | 0.816643 | 4.975560e-52 | -8.615850e-47 |
Msa0132920 | Msa0309060 | 0.809681 | 1.677956e-50 | -8.615850e-47 |
Msa0133450 | Msa0309060 | 0.826224 | 3.050433e-54 | -8.615850e-47 |
Msa0133670 | Msa0309060 | 0.835893 | 1.286916e-56 | -8.615850e-47 |
Msa0133880 | Msa0309060 | 0.839553 | 1.478855e-57 | -8.615850e-47 |
Msa0134300 | Msa0309060 | 0.847754 | 9.465530e-60 | -8.615850e-47 |
Msa0134380 | Msa0309060 | 0.844530 | 7.140230e-59 | -8.615850e-47 |
Msa0134390 | Msa0309060 | 0.836877 | 7.232136e-57 | -8.615850e-47 |
Msa0134400 | Msa0309060 | 0.813210 | 2.873018e-51 | -8.615850e-47 |
Msa0134420 | Msa0309060 | 0.839571 | 1.463088e-57 | -8.615850e-47 |
Msa0137010 | Msa0309060 | 0.817283 | 3.573408e-52 | -8.615850e-47 |
Msa0146840 | Msa0309060 | 0.812478 | 4.155867e-51 | -8.615850e-47 |
Msa0160470 | Msa0309060 | 0.806083 | 9.773089e-50 | -8.615850e-47 |
Msa0173280 | Msa0309060 | 0.804764 | 1.846998e-49 | -8.615850e-47 |
Msa0175720 | Msa0309060 | 0.833795 | 4.344027e-56 | -8.615850e-47 |
Msa0180590 | Msa0309060 | 0.828184 | 1.035146e-54 | -8.615850e-47 |
Msa0180600 | Msa0309060 | 0.857832 | 1.247864e-62 | -8.615850e-47 |
Msa0180780 | Msa0309060 | 0.847823 | 9.061998e-60 | -8.615850e-47 |
Msa0184120 | Msa0309060 | 0.837960 | 3.819084e-57 | -8.615850e-47 |
Msa0185950 | Msa0309060 | 0.802304 | 5.977340e-49 | -8.615850e-47 |
Msa0186510 | Msa0309060 | 0.810249 | 1.266163e-50 | -8.615850e-47 |
Msa0188500 | Msa0309060 | 0.937431 | 3.501513e-98 | -8.615850e-47 |
Msa0197730 | Msa0309060 | 0.823800 | 1.139698e-53 | -8.615850e-47 |
Msa0200840 | Msa0309060 | 0.809332 | 1.993965e-50 | -8.615850e-47 |
Msa0203180 | Msa0309060 | 0.820532 | 6.528211e-53 | -8.615850e-47 |
Msa0210880 | Msa0309060 | 0.851186 | 1.045657e-60 | -8.615850e-47 |
Msa0215810 | Msa0309060 | 0.811331 | 7.387194e-51 | -8.615850e-47 |
Msa0216010 | Msa0309060 | 0.800009 | 1.761866e-48 | -8.615850e-47 |
Msa0216560 | Msa0309060 | 0.816074 | 6.669099e-52 | -8.615850e-47 |
Msa0221940 | Msa0309060 | 0.806305 | 8.775015e-50 | -8.615850e-47 |
Msa0223190 | Msa0309060 | 0.850437 | 1.699179e-60 | -8.615850e-47 |
Msa0225880 | Msa0309060 | 0.830458 | 2.903497e-55 | -8.615850e-47 |
Msa0230980 | Msa0309060 | 0.988245 | 2.859120e-173 | -8.615850e-47 |
Msa0231590 | Msa0309060 | 0.802053 | 6.731717e-49 | -8.615850e-47 |
Msa0238960 | Msa0309060 | 0.823747 | 1.172937e-53 | -8.615850e-47 |
Msa0246300 | Msa0309060 | 0.830700 | 2.533950e-55 | -8.615850e-47 |
Msa0251150 | Msa0309060 | 0.819073 | 1.406388e-52 | -8.615850e-47 |
Msa0254540 | Msa0309060 | -0.808568 | 2.905517e-50 | -8.615850e-47 |
Msa0256430 | Msa0309060 | 0.807278 | 5.465510e-50 | -8.615850e-47 |
Msa0260470 | Msa0309060 | 0.828868 | 7.078565e-55 | -8.615850e-47 |
Msa0263520 | Msa0309060 | 0.801994 | 6.922179e-49 | -8.615850e-47 |
Msa0264420 | Msa0309060 | 0.841007 | 6.166984e-58 | -8.615850e-47 |
Msa0270460 | Msa0309060 | 0.978618 | 3.328653e-146 | -8.615850e-47 |
Msa0276800 | Msa0309060 | 0.801869 | 7.347152e-49 | -8.615850e-47 |
Msa0284870 | Msa0309060 | 0.802747 | 4.845349e-49 | -8.615850e-47 |
Msa0290600 | Msa0309060 | 0.818689 | 1.719096e-52 | -8.615850e-47 |
Msa0295840 | Msa0309060 | 0.838888 | 2.200639e-57 | -8.615850e-47 |
Msa0302310 | Msa0309060 | 0.830088 | 3.575783e-55 | -8.615850e-47 |
Msa0304110 | Msa0309060 | 0.837350 | 5.474896e-57 | -8.615850e-47 |
Msa0309060 | Msa0316720 | 0.818262 | 2.148983e-52 | -8.615850e-47 |
Msa0309060 | Msa0317360 | 0.804805 | 1.810521e-49 | -8.615850e-47 |
Msa0309060 | Msa0336270 | 0.818995 | 1.465330e-52 | -8.615850e-47 |
Msa0309060 | Msa0338670 | 0.802309 | 5.963081e-49 | -8.615850e-47 |
Msa0309060 | Msa0339670 | 0.844638 | 6.677031e-59 | -8.615850e-47 |
Msa0309060 | Msa0341190 | 0.847814 | 9.116069e-60 | -8.615850e-47 |
Msa0309060 | Msa0352640 | 0.822103 | 2.833222e-53 | -8.615850e-47 |
Msa0309060 | Msa0364010 | 0.820733 | 5.867476e-53 | -8.615850e-47 |
Msa0309060 | Msa0364860 | 0.835363 | 1.753329e-56 | -8.615850e-47 |
Msa0309060 | Msa0372990 | 0.853276 | 2.660258e-61 | -8.615850e-47 |
Msa0309060 | Msa0376480 | 0.803544 | 3.314607e-49 | -8.615850e-47 |
Msa0309060 | Msa0378670 | 0.834983 | 2.185338e-56 | -8.615850e-47 |
Msa0309060 | Msa0378700 | 0.849649 | 2.824599e-60 | -8.615850e-47 |
Msa0309060 | Msa0391160 | 0.850309 | 1.846245e-60 | -8.615850e-47 |
Msa0309060 | Msa0403720 | 0.859032 | 5.474078e-63 | -8.615850e-47 |
Msa0309060 | Msa0404180 | 0.800658 | 1.299676e-48 | -8.615850e-47 |
Msa0309060 | Msa0415200 | 0.808012 | 3.816657e-50 | -8.615850e-47 |
Msa0309060 | Msa0421390 | 0.846730 | 1.807693e-59 | -8.615850e-47 |
Msa0309060 | Msa0421800 | 0.846740 | 1.795819e-59 | -8.615850e-47 |
Msa0309060 | Msa0423110 | 0.828907 | 6.926178e-55 | -8.615850e-47 |
Msa0309060 | Msa0426860 | 0.831959 | 1.241750e-55 | -8.615850e-47 |
Msa0309060 | Msa0426890 | 0.805843 | 1.097572e-49 | -8.615850e-47 |
Msa0309060 | Msa0427050 | 0.837386 | 5.358245e-57 | -8.615850e-47 |
Msa0309060 | Msa0428310 | 0.834294 | 3.257035e-56 | -8.615850e-47 |
Msa0309060 | Msa0428330 | 0.819044 | 1.428121e-52 | -8.615850e-47 |
Msa0309060 | Msa0430040 | 0.826312 | 2.906756e-54 | -8.615850e-47 |
Msa0309060 | Msa0431940 | 0.861552 | 9.471473e-64 | -8.615850e-47 |
Msa0309060 | Msa0448400 | 0.851900 | 6.563660e-61 | -8.615850e-47 |
Msa0309060 | Msa0456480 | 0.888373 | 6.255461e-73 | -8.615850e-47 |
Msa0309060 | Msa0462980 | -0.831929 | 1.263015e-55 | -8.615850e-47 |
Msa0309060 | Msa0463540 | 0.833199 | 6.117710e-56 | -8.615850e-47 |
Msa0309060 | Msa0467800 | 0.823171 | 1.599330e-53 | -8.615850e-47 |
Msa0309060 | Msa0467880 | 0.818560 | 1.839454e-52 | -8.615850e-47 |
Msa0309060 | Msa0471790 | 0.807755 | 4.327943e-50 | -8.615850e-47 |
Msa0309060 | Msa0473450 | 0.806658 | 7.391041e-50 | -8.615850e-47 |
Msa0309060 | Msa0481050 | 0.855622 | 5.575020e-62 | -8.615850e-47 |
Msa0309060 | Msa0496570 | 0.808505 | 2.997343e-50 | -8.615850e-47 |
Msa0309060 | Msa0500490 | 0.848701 | 5.181228e-60 | -8.615850e-47 |
Msa0309060 | Msa0501350 | 0.809214 | 2.113127e-50 | -8.615850e-47 |
Msa0309060 | Msa0504360 | 0.807195 | 5.692107e-50 | -8.615850e-47 |
Msa0309060 | Msa0508580 | -0.818799 | 1.622923e-52 | -8.615850e-47 |
Msa0309060 | Msa0511600 | 0.817304 | 3.534073e-52 | -8.615850e-47 |
Msa0309060 | Msa0514260 | 0.846293 | 2.378407e-59 | -8.615850e-47 |
Msa0309060 | Msa0519060 | 0.845306 | 4.409572e-59 | -8.615850e-47 |
Msa0309060 | Msa0520810 | 0.838127 | 3.458385e-57 | -8.615850e-47 |
Msa0309060 | Msa0521940 | -0.863150 | 3.056869e-64 | -8.615850e-47 |
Msa0309060 | Msa0534420 | 0.841152 | 5.650753e-58 | -8.615850e-47 |
Msa0309060 | Msa0549330 | 0.863585 | 2.241776e-64 | -8.615850e-47 |
Msa0309060 | Msa0558890 | 0.804250 | 2.363749e-49 | -8.615850e-47 |
Msa0309060 | Msa0560370 | 0.803012 | 4.271440e-49 | -8.615850e-47 |
Msa0309060 | Msa0568460 | 0.800657 | 1.300467e-48 | -8.615850e-47 |
Msa0309060 | Msa0568490 | 0.801598 | 8.350063e-49 | -8.615850e-47 |
Msa0309060 | Msa0576600 | 0.809347 | 1.979155e-50 | -8.615850e-47 |
Msa0309060 | Msa0580540 | 0.842848 | 2.012684e-58 | -8.615850e-47 |
Msa0309060 | Msa0604640 | 0.842598 | 2.344875e-58 | -8.615850e-47 |
Msa0309060 | Msa0605230 | 0.800406 | 1.462794e-48 | -8.615850e-47 |
Msa0309060 | Msa0606680 | 0.834304 | 3.237919e-56 | -8.615850e-47 |
Msa0309060 | Msa0608940 | 0.815088 | 1.105907e-51 | -8.615850e-47 |
Msa0309060 | Msa0614390 | 0.803789 | 2.947395e-49 | -8.615850e-47 |
Msa0309060 | Msa0614980 | 0.806070 | 9.832912e-50 | -8.615850e-47 |
Msa0309060 | Msa0615850 | 0.855040 | 8.234694e-62 | -8.615850e-47 |
Msa0309060 | Msa0617120 | 0.825726 | 4.005682e-54 | -8.615850e-47 |
Msa0309060 | Msa0617830 | 0.819027 | 1.440373e-52 | -8.615850e-47 |
Msa0309060 | Msa0620750 | 0.834151 | 3.537281e-56 | -8.615850e-47 |
Msa0309060 | Msa0621780 | 0.851758 | 7.201474e-61 | -8.615850e-47 |
Msa0309060 | Msa0623360 | 0.825528 | 4.463679e-54 | -8.615850e-47 |
Msa0309060 | Msa0630850 | 0.829891 | 3.992787e-55 | -8.615850e-47 |
Msa0309060 | Msa0635990 | 0.801988 | 6.942767e-49 | -8.615850e-47 |
Msa0309060 | Msa0638040 | 0.806370 | 8.501565e-50 | -8.615850e-47 |
Msa0309060 | Msa0639030 | 0.833154 | 6.278068e-56 | -8.615850e-47 |
Msa0309060 | Msa0653710 | 0.808262 | 3.377342e-50 | -8.615850e-47 |
Msa0309060 | Msa0656680 | 0.810647 | 1.038637e-50 | -8.615850e-47 |
Msa0309060 | Msa0665040 | 0.807159 | 5.791769e-50 | -8.615850e-47 |
Msa0309060 | Msa0677110 | 0.802545 | 5.332030e-49 | -8.615850e-47 |
Msa0309060 | Msa0681880 | 0.827905 | 1.208165e-54 | -8.615850e-47 |
Msa0309060 | Msa0697600 | 0.846585 | 1.980237e-59 | -8.615850e-47 |
Msa0309060 | Msa0698900 | 0.869479 | 3.003289e-66 | -8.615850e-47 |
Msa0309060 | Msa0704780 | 0.867451 | 1.355506e-65 | -8.615850e-47 |
Msa0309060 | Msa0705050 | 0.898934 | 3.260869e-77 | -8.615850e-47 |
Msa0309060 | Msa0705130 | 0.804987 | 1.659138e-49 | -8.615850e-47 |
Msa0309060 | Msa0712670 | 0.810185 | 1.307002e-50 | -8.615850e-47 |
Msa0309060 | Msa0714060 | 0.850106 | 2.104376e-60 | -8.615850e-47 |
Msa0309060 | Msa0714200 | 0.862990 | 3.424718e-64 | -8.615850e-47 |
Msa0309060 | Msa0715510 | -0.839732 | 1.329148e-57 | -8.615850e-47 |
Msa0309060 | Msa0729590 | 0.826184 | 3.118765e-54 | -8.615850e-47 |
Msa0309060 | Msa0729780 | 0.807483 | 4.944137e-50 | -8.615850e-47 |
Msa0309060 | Msa0734760 | 0.839731 | 1.329392e-57 | -8.615850e-47 |
Msa0309060 | Msa0736930 | 0.826177 | 3.130244e-54 | -8.615850e-47 |
Msa0309060 | Msa0739330 | 0.818180 | 2.242636e-52 | -8.615850e-47 |
Msa0309060 | Msa0739610 | 0.827729 | 1.332331e-54 | -8.615850e-47 |
Msa0309060 | Msa0747900 | 0.815100 | 1.098809e-51 | -8.615850e-47 |
Msa0309060 | Msa0748980 | 0.831491 | 1.619888e-55 | -8.615850e-47 |
Msa0309060 | Msa0752830 | 0.817116 | 3.895579e-52 | -8.615850e-47 |
Msa0309060 | Msa0754350 | 0.829180 | 5.946981e-55 | -8.615850e-47 |
Msa0309060 | Msa0754790 | 0.810581 | 1.073602e-50 | -8.615850e-47 |
Msa0309060 | Msa0754840 | 0.815918 | 7.227134e-52 | -8.615850e-47 |
Msa0309060 | Msa0756440 | 0.874840 | 4.929626e-68 | -8.615850e-47 |
Msa0309060 | Msa0766880 | 0.846947 | 1.576849e-59 | -8.615850e-47 |
Msa0309060 | Msa0770020 | 0.807503 | 4.895756e-50 | -8.615850e-47 |
Msa0309060 | Msa0771960 | 0.802542 | 5.339050e-49 | -8.615850e-47 |
Msa0309060 | Msa0773290 | 0.822145 | 2.770704e-53 | -8.615850e-47 |
Msa0309060 | Msa0776290 | 0.808032 | 3.780256e-50 | -8.615850e-47 |
Msa0309060 | Msa0782030 | 0.846583 | 1.983230e-59 | -8.615850e-47 |
Msa0309060 | Msa0793060 | 0.836244 | 1.048206e-56 | -8.615850e-47 |
Msa0309060 | Msa0795710 | 0.851925 | 6.460327e-61 | -8.615850e-47 |
Msa0309060 | Msa0796610 | 0.834345 | 3.162546e-56 | -8.615850e-47 |
Msa0309060 | Msa0804930 | 0.804923 | 1.711007e-49 | -8.615850e-47 |
Msa0309060 | Msa0813630 | 0.850537 | 1.592961e-60 | -8.615850e-47 |
Msa0309060 | Msa0815950 | 0.818517 | 1.881238e-52 | -8.615850e-47 |
Msa0309060 | Msa0822370 | 0.830306 | 3.163746e-55 | -8.615850e-47 |
Msa0309060 | Msa0824770 | 0.829408 | 5.235375e-55 | -8.615850e-47 |
Msa0309060 | Msa0825520 | 0.828468 | 8.840108e-55 | -8.615850e-47 |
Msa0309060 | Msa0833450 | 0.853658 | 2.066206e-61 | -8.615850e-47 |
Msa0309060 | Msa0833910 | 0.826084 | 3.294446e-54 | -8.615850e-47 |
Msa0309060 | Msa0834160 | 0.833821 | 4.279597e-56 | -8.615850e-47 |
Msa0309060 | Msa0834200 | 0.804379 | 2.222592e-49 | -8.615850e-47 |
Msa0309060 | Msa0835550 | 0.870523 | 1.368664e-66 | -8.615850e-47 |
Msa0309060 | Msa0848980 | 0.814091 | 1.837714e-51 | -8.615850e-47 |
Msa0309060 | Msa0850720 | 0.824567 | 7.525538e-54 | -8.615850e-47 |
Msa0309060 | Msa0850740 | 0.850213 | 1.963322e-60 | -8.615850e-47 |
Msa0309060 | Msa0854190 | 0.830654 | 2.599944e-55 | -8.615850e-47 |
Msa0309060 | Msa0861480 | 0.833130 | 6.365534e-56 | -8.615850e-47 |
Msa0309060 | Msa0861560 | 0.861889 | 7.468049e-64 | -8.615850e-47 |
Msa0309060 | Msa0864730 | 0.825553 | 4.403436e-54 | -8.615850e-47 |
Msa0309060 | Msa0864750 | 0.822806 | 1.945348e-53 | -8.615850e-47 |
Msa0309060 | Msa0868040 | 0.816758 | 4.688810e-52 | -8.615850e-47 |
Msa0309060 | Msa0899080 | 0.801429 | 9.042178e-49 | -8.615850e-47 |
Msa0309060 | Msa0899730 | 0.838909 | 2.172743e-57 | -8.615850e-47 |
Msa0309060 | Msa0913120 | 0.846906 | 1.618002e-59 | -8.615850e-47 |
Msa0309060 | Msa0927890 | 0.836879 | 7.224367e-57 | -8.615850e-47 |
Msa0309060 | Msa0930950 | 0.856489 | 3.108534e-62 | -8.615850e-47 |
Msa0309060 | Msa0934830 | 0.822791 | 1.961175e-53 | -8.615850e-47 |
Msa0309060 | Msa0946300 | 0.810710 | 1.006801e-50 | -8.615850e-47 |
Msa0309060 | Msa0961200 | 0.803580 | 3.257162e-49 | -8.615850e-47 |
Msa0309060 | Msa0964650 | 0.853468 | 2.343350e-61 | -8.615850e-47 |
Msa0309060 | Msa0967260 | 0.838097 | 3.520960e-57 | -8.615850e-47 |
Msa0309060 | Msa0967450 | 0.803522 | 3.349682e-49 | -8.615850e-47 |
Msa0309060 | Msa0967670 | 0.801127 | 1.042683e-48 | -8.615850e-47 |
Msa0309060 | Msa0968240 | 0.802450 | 5.578894e-49 | -8.615850e-47 |
Msa0309060 | Msa0968960 | 0.804269 | 2.342611e-49 | -8.615850e-47 |
Msa0309060 | Msa0971860 | 0.836485 | 9.104980e-57 | -8.615850e-47 |
Msa0309060 | Msa0975560 | 0.813182 | 2.912809e-51 | -8.615850e-47 |
Msa0309060 | Msa0982590 | 0.881247 | 2.812538e-70 | -8.615850e-47 |
Msa0309060 | Msa0995660 | 0.802434 | 5.620854e-49 | -8.615850e-47 |
Msa0309060 | Msa0998940 | 0.818360 | 2.041126e-52 | -8.615850e-47 |
Msa0309060 | Msa0999480 | 0.818578 | 1.822458e-52 | -8.615850e-47 |
Msa0309060 | Msa0999590 | 0.814697 | 1.349883e-51 | -8.615850e-47 |
Msa0309060 | Msa1030430 | 0.814592 | 1.424690e-51 | -8.615850e-47 |
Msa0309060 | Msa1033230 | 0.830185 | 3.386126e-55 | -8.615850e-47 |
Msa0309060 | Msa1036020 | -0.805005 | 1.645111e-49 | -8.615850e-47 |
Msa0309060 | Msa1040730 | -0.805607 | 1.230489e-49 | -8.615850e-47 |
Msa0309060 | Msa1043870 | 0.827862 | 1.237471e-54 | -8.615850e-47 |
Msa0309060 | Msa1057320 | 0.862962 | 3.493537e-64 | -8.615850e-47 |
Msa0309060 | Msa1067910 | 0.843855 | 1.083846e-58 | -8.615850e-47 |
Msa0309060 | Msa1071310 | 0.830250 | 3.263705e-55 | -8.615850e-47 |
Msa0309060 | Msa1071460 | 0.805754 | 1.145885e-49 | -8.615850e-47 |
Msa0309060 | Msa1072770 | 0.820476 | 6.723592e-53 | -8.615850e-47 |
Msa0309060 | Msa1102180 | 0.868238 | 7.575826e-66 | -8.615850e-47 |
Msa0309060 | Msa1102200 | 0.852154 | 5.562092e-61 | -8.615850e-47 |
Msa0309060 | Msa1122480 | 0.803040 | 4.214315e-49 | -8.615850e-47 |
Msa0309060 | Msa1124440 | 0.822878 | 1.871460e-53 | -8.615850e-47 |
Msa0309060 | Msa1133440 | 0.820068 | 8.339237e-53 | -8.615850e-47 |
Msa0309060 | Msa1134770 | -0.808273 | 3.359063e-50 | -8.615850e-47 |
Msa0309060 | Msa1138600 | 0.838962 | 2.105379e-57 | -8.615850e-47 |
Msa0309060 | Msa1145070 | 0.816929 | 4.291671e-52 | -8.615850e-47 |
Msa0309060 | Msa1147870 | 0.800249 | 1.574578e-48 | -8.615850e-47 |
Msa0309060 | Msa1152500 | 0.820102 | 8.191034e-53 | -8.615850e-47 |
Msa0309060 | Msa1160780 | -0.813985 | 1.939931e-51 | -8.615850e-47 |
Msa0309060 | Msa1161120 | 0.828341 | 9.485929e-55 | -8.615850e-47 |
Msa0309060 | Msa1162360 | -0.808840 | 2.541130e-50 | -8.615850e-47 |
Msa0309060 | Msa1173410 | 0.808104 | 3.648567e-50 | -8.615850e-47 |
Msa0309060 | Msa1178920 | 0.809172 | 2.157637e-50 | -8.615850e-47 |
Msa0309060 | Msa1187810 | 0.812418 | 4.283117e-51 | -8.615850e-47 |
Msa0309060 | Msa1195860 | 0.815168 | 1.061669e-51 | -8.615850e-47 |
Msa0309060 | Msa1198450 | 0.821307 | 4.328633e-53 | -8.615850e-47 |
Msa0309060 | Msa1202220 | 0.810416 | 1.165058e-50 | -8.615850e-47 |
Msa0309060 | Msa1203840 | 0.811881 | 5.607464e-51 | -8.615850e-47 |
Msa0309060 | Msa1203860 | 0.835871 | 1.303444e-56 | -8.615850e-47 |
Msa0309060 | Msa1209790 | 0.801987 | 6.946015e-49 | -8.615850e-47 |
Msa0309060 | Msa1211260 | 0.838261 | 3.194923e-57 | -8.615850e-47 |
Msa0309060 | Msa1211300 | 0.826032 | 3.388911e-54 | -8.615850e-47 |
Msa0309060 | Msa1211390 | 0.843141 | 1.681886e-58 | -8.615850e-47 |
Msa0309060 | Msa1219780 | -0.801440 | 8.994122e-49 | -8.615850e-47 |
Msa0309060 | Msa1220740 | 0.838692 | 2.473375e-57 | -8.615850e-47 |
Msa0309060 | Msa1228330 | 0.801761 | 7.730508e-49 | -8.615850e-47 |
Msa0309060 | Msa1233820 | 0.822064 | 2.892882e-53 | -8.615850e-47 |
Msa0309060 | Msa1235770 | 0.811508 | 6.760426e-51 | -8.615850e-47 |
Msa0309060 | Msa1240060 | -0.809008 | 2.339088e-50 | -8.615850e-47 |
Msa0309060 | Msa1242010 | 0.820905 | 5.357575e-53 | -8.615850e-47 |
Msa0309060 | Msa1242990 | 0.873597 | 1.299887e-67 | -8.615850e-47 |
Msa0309060 | Msa1243630 | 0.800080 | 1.704356e-48 | -8.615850e-47 |
Msa0309060 | Msa1244220 | 0.802148 | 6.436483e-49 | -8.615850e-47 |
Msa0309060 | Msa1244660 | 0.825617 | 4.251765e-54 | -8.615850e-47 |
Msa0309060 | Msa1259010 | 0.819570 | 1.083492e-52 | -8.615850e-47 |
Msa0309060 | Msa1263610 | 0.817395 | 3.371397e-52 | -8.615850e-47 |
Msa0309060 | Msa1276110 | 0.827423 | 1.577533e-54 | -8.615850e-47 |
Msa0309060 | Msa1278420 | 0.803389 | 3.569075e-49 | -8.615850e-47 |
Msa0309060 | Msa1282210 | 0.808309 | 3.299166e-50 | -8.615850e-47 |
Msa0309060 | Msa1283120 | 0.830944 | 2.207524e-55 | -8.615850e-47 |
Msa0309060 | Msa1284390 | 0.848749 | 5.026583e-60 | -8.615850e-47 |
Msa0309060 | Msa1286910 | 0.804584 | 2.013896e-49 | -8.615850e-47 |
Msa0309060 | Msa1288970 | 0.813571 | 2.392391e-51 | -8.615850e-47 |
Msa0309060 | Msa1299370 | 0.803320 | 3.688494e-49 | -8.615850e-47 |
Msa0309060 | Msa1299900 | 0.802578 | 5.248589e-49 | -8.615850e-47 |
Msa0309060 | Msa1302780 | 0.849831 | 2.511567e-60 | -8.615850e-47 |
Msa0309060 | Msa1306700 | 0.883033 | 6.316899e-71 | -8.615850e-47 |
Msa0309060 | Msa1309910 | 0.800848 | 1.188673e-48 | -8.615850e-47 |
Msa0309060 | Msa1320530 | -0.805240 | 1.468618e-49 | -8.615850e-47 |
Msa0309060 | Msa1322420 | 0.821611 | 3.682090e-53 | -8.615850e-47 |
Msa0309060 | Msa1323920 | 0.863619 | 2.188203e-64 | -8.615850e-47 |
Msa0309060 | Msa1325820 | 0.810403 | 1.173108e-50 | -8.615850e-47 |
Msa0309060 | Msa1327820 | 0.806943 | 6.433553e-50 | -8.615850e-47 |
Msa0309060 | Msa1330910 | 0.827140 | 1.844465e-54 | -8.615850e-47 |
Msa0309060 | Msa1334650 | 0.829189 | 5.916745e-55 | -8.615850e-47 |
Msa0309060 | Msa1342400 | 0.876456 | 1.376103e-68 | -8.615850e-47 |
Msa0309060 | Msa1344080 | 0.810809 | 9.581228e-51 | -8.615850e-47 |
Msa0309060 | Msa1346540 | 0.832876 | 7.358574e-56 | -8.615850e-47 |
Msa0309060 | Msa1348330 | -0.821328 | 4.279682e-53 | -8.615850e-47 |
Msa0309060 | Msa1349360 | 0.804481 | 2.116232e-49 | -8.615850e-47 |
Msa0309060 | Msa1349640 | 0.828384 | 9.266133e-55 | -8.615850e-47 |
Msa0309060 | Msa1349850 | 0.857921 | 1.174082e-62 | -8.615850e-47 |
Msa0309060 | Msa1353280 | 0.825849 | 3.744798e-54 | -8.615850e-47 |
Msa0309060 | Msa1356730 | 0.817156 | 3.815886e-52 | -8.615850e-47 |
Msa0309060 | Msa1362590 | -0.808616 | 2.837356e-50 | -8.615850e-47 |
Msa0309060 | Msa1363640 | 0.805488 | 1.302909e-49 | -8.615850e-47 |
Msa0309060 | Msa1363690 | -0.822311 | 2.535554e-53 | -8.615850e-47 |
Msa0309060 | Msa1364520 | 0.808221 | 3.444861e-50 | -8.615850e-47 |
Msa0309060 | Msa1365210 | 0.804882 | 1.745238e-49 | -8.615850e-47 |
Msa0309060 | Msa1368660 | 0.856806 | 2.507677e-62 | -8.615850e-47 |
Msa0309060 | Msa1370270 | 0.808143 | 3.579376e-50 | -8.615850e-47 |
Msa0309060 | Msa1370930 | -0.828085 | 1.093397e-54 | -8.615850e-47 |
Msa0309060 | Msa1384620 | 0.829534 | 4.878995e-55 | -8.615850e-47 |
Msa0309060 | Msa1384980 | 0.824156 | 9.403089e-54 | -8.615850e-47 |
Msa0309060 | Msa1385940 | 0.810182 | 1.308827e-50 | -8.615850e-47 |
Msa0309060 | Msa1388070 | 0.818975 | 1.480220e-52 | -8.615850e-47 |
Msa0309060 | Msa1388270 | 0.856817 | 2.488481e-62 | -8.615850e-47 |
Msa0309060 | Msa1388520 | 0.835296 | 1.822325e-56 | -8.615850e-47 |
Msa0309060 | Msa1395580 | 0.842648 | 2.273753e-58 | -8.615850e-47 |
Msa0309060 | Msa1396550 | -0.823449 | 1.376679e-53 | -8.615850e-47 |
Msa0309060 | Msa1397040 | 0.832024 | 1.196947e-55 | -8.615850e-47 |
Msa0309060 | Msa1401000 | 0.806401 | 8.373648e-50 | -8.615850e-47 |
Msa0309060 | Msa1403950 | 0.824960 | 6.081018e-54 | -8.615850e-47 |
Msa0309060 | Msa1404720 | 0.802991 | 4.314224e-49 | -8.615850e-47 |
Msa0309060 | Msa1407200 | 0.803789 | 2.947598e-49 | -8.615850e-47 |
Msa0309060 | Msa1409050 | 0.813155 | 2.954095e-51 | -8.615850e-47 |
Msa0309060 | Msa1409760 | 0.806133 | 9.537373e-50 | -8.615850e-47 |
Msa0309060 | Msa1413220 | 0.813041 | 3.128160e-51 | -8.615850e-47 |
Msa0309060 | Msa1413900 | 0.829056 | 6.372295e-55 | -8.615850e-47 |
Msa0309060 | Msa1415270 | 0.808233 | 3.424527e-50 | -8.615850e-47 |
Msa0309060 | Msa1419230 | 0.844854 | 5.841718e-59 | -8.615850e-47 |
Msa0309060 | Msa1420600 | 0.804579 | 2.018873e-49 | -8.615850e-47 |
Msa0309060 | Msa1427180 | 0.844869 | 5.787141e-59 | -8.615850e-47 |
Msa0309060 | Msa1427600 | 0.835190 | 1.938344e-56 | -8.615850e-47 |
Msa0309060 | Msa1431180 | 0.803301 | 3.722222e-49 | -8.615850e-47 |
Msa0309060 | Msa1435470 | 0.813563 | 2.403098e-51 | -8.615850e-47 |
Msa0309060 | Msa1440180 | 0.821167 | 4.662137e-53 | -8.615850e-47 |
Msa0309060 | Msa1446220 | 0.819462 | 1.146923e-52 | -8.615850e-47 |
Msa0309060 | Msa1449740 | 0.819390 | 1.190972e-52 | -8.615850e-47 |
Msa0309060 | Msa1451690 | 0.816682 | 4.875363e-52 | -8.615850e-47 |
Msa0309060 | Msa1452200 | 0.862574 | 4.601105e-64 | -8.615850e-47 |
Msa0309060 | Msa1458920 | 0.818265 | 2.144755e-52 | -8.615850e-47 |
Msa0309060 | Msa1459630 | 0.840558 | 8.090518e-58 | -8.615850e-47 |
PPI
Gene1 | Gene2 | Type |
---|
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
Msa0309060 | MtrunA17_Chr2g0277211 | 89.868 | 227 | 16 | 2 | 1 | 224 | 1 | 223 | 8.61e-143 | 397 |
Msa0309060 | MtrunA17_Chr2g0298061 | 74.510 | 153 | 39 | 0 | 72 | 224 | 89 | 241 | 1.57e-77 | 233 |
Msa0309060 | MtrunA17_Chr7g0270231 | 43.312 | 157 | 83 | 3 | 68 | 223 | 63 | 214 | 8.32e-31 | 112 |
Msa0309060 | MtrunA17_Chr8g0352991 | 58.904 | 73 | 30 | 0 | 68 | 140 | 63 | 135 | 2.06e-23 | 92.0 |
Msa0309060 | MtrunA17_Chr1g0182901 | 46.667 | 60 | 30 | 1 | 86 | 143 | 200 | 259 | 2.56e-11 | 61.6 |
Msa0309060 | MtrunA17_Chr3g0115091 | 46.667 | 60 | 30 | 1 | 86 | 143 | 198 | 257 | 2.65e-11 | 61.6 |
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
Msa0309060 | AT5G49940.1 | 80.000 | 175 | 35 | 0 | 50 | 224 | 61 | 235 | 1.42e-98 | 286 |
Msa0309060 | AT4G25910.1 | 61.364 | 220 | 70 | 4 | 6 | 224 | 30 | 235 | 9.45e-81 | 241 |
Msa0309060 | AT5G49940.2 | 78.947 | 114 | 24 | 0 | 50 | 163 | 61 | 174 | 7.52e-60 | 186 |
Msa0309060 | AT4G01940.1 | 36.813 | 182 | 107 | 4 | 38 | 213 | 44 | 223 | 5.76e-29 | 108 |
Find 108 sgRNAs with CRISPR-Local
Find 292 sgRNAs with CRISPR-GE
CRISPR-Local
sgRNA_sequence | on_target_score | Position | Region |
---|---|---|---|
GACGAGGTTGTTTGTATATT+TGG | 0.134296 | 2_4:-3484868 | Msa0309060:three_prime_UTR |
GGTTCGACTGCGACTATTTC+AGG | 0.155822 | 2_4:+3487608 | None:intergenic |
GTTCAGCTGCTATGATATTT+TGG | 0.179960 | 2_4:-3485447 | Msa0309060:exon |
TTCTGTTATGACAATGAAAA+TGG | 0.180204 | 2_4:-3487660 | Msa0309060:CDS |
GGCAATTCCACAGCTGAATT+TGG | 0.194360 | 2_4:+3487824 | None:intergenic |
TTCCATTAGTGGCAACATTA+TGG | 0.254489 | 2_4:+3485085 | None:intergenic |
GGGCATTGAGCGTCGATTAA+TGG | 0.258243 | 2_4:-3487639 | Msa0309060:CDS |
ATTGCTAGTACGGGGTTTAA+AGG | 0.285870 | 2_4:-3484890 | Msa0309060:three_prime_UTR |
TTCAGGTTCTAGAGGAATTA+AGG | 0.293515 | 2_4:-3485626 | Msa0309060:intron |
CTCCATAATGTTGCCACTAA+TGG | 0.297668 | 2_4:-3485087 | Msa0309060:three_prime_UTR |
GTGCGATTGGCGATGGTGTT+TGG | 0.299431 | 2_4:-3489665 | Msa0309060:five_prime_UTR |
TGTTGTACGGTTGAAGTTAC+AGG | 0.305471 | 2_4:-3487705 | Msa0309060:CDS |
GACTTTGACTGTAATAATAA+TGG | 0.311031 | 2_4:+3485292 | None:intergenic |
CGTTAAGTTCTTTCCATTAG+TGG | 0.315941 | 2_4:+3485074 | None:intergenic |
AATTGTATCGGAATGAGATT+TGG | 0.323240 | 2_4:-3484953 | Msa0309060:three_prime_UTR |
TGCGATTGGCGATGGTGTTT+GGG | 0.323776 | 2_4:-3489664 | Msa0309060:five_prime_UTR |
TTATGTTTGTACAGCTATAA+AGG | 0.329155 | 2_4:-3487858 | Msa0309060:intron |
TAGCTCCATTATGTTGTAAT+CGG | 0.332611 | 2_4:-3485243 | Msa0309060:three_prime_UTR |
TTCTTCCATCACCCTCAAAA+AGG | 0.340435 | 2_4:-3489419 | Msa0309060:intron |
TAAGCAATTTAAAATGTTGT+AGG | 0.369306 | 2_4:-3484777 | Msa0309060:three_prime_UTR |
GTGATTCGGACCTTTACTAT+TGG | 0.387716 | 2_4:+3485549 | None:intergenic |
CCGGTTTCTTCATCAGTTAC+CGG | 0.393466 | 2_4:+3487587 | None:intergenic |
AAATCCCGATTACAACATAA+TGG | 0.395109 | 2_4:+3485238 | None:intergenic |
CCGTACCTGGTAGGGGCAGC+TGG | 0.401375 | 2_4:-3485603 | Msa0309060:CDS |
GTGGGTGGGTGGTGTGCGAT+TGG | 0.411846 | 2_4:-3489678 | Msa0309060:five_prime_UTR |
TCCTTTCATACACGTCCGTT+TGG | 0.412463 | 2_4:-3489247 | Msa0309060:intron |
TGAAATAGTCGCAGTCGAAC+CGG | 0.432530 | 2_4:-3487606 | Msa0309060:CDS |
AAAGAAAAGAAAGGAAGAAA+CGG | 0.439770 | 2_4:-3489708 | None:intergenic |
GGGTGGTGTGCGATTGGCGA+TGG | 0.442125 | 2_4:-3489672 | Msa0309060:five_prime_UTR |
TCTTGAATTGGTAGCAATTG+AGG | 0.443279 | 2_4:-3485574 | Msa0309060:CDS |
TCTTTGTTGTTGCAGGGCAC+TGG | 0.448241 | 2_4:-3489328 | Msa0309060:intron |
TCGTGATATTATTGCTAGTA+CGG | 0.450284 | 2_4:-3484900 | Msa0309060:three_prime_UTR |
AGCTGAACTGCTGCTATGGC+AGG | 0.451914 | 2_4:+3485462 | None:intergenic |
AGCTGGTGGAACTCTTGAAT+TGG | 0.456731 | 2_4:-3485586 | Msa0309060:CDS |
AAACTGTGTTGGATGAAATT+CGG | 0.457743 | 2_4:-3487781 | Msa0309060:CDS |
CGTGATATTATTGCTAGTAC+GGG | 0.458389 | 2_4:-3484899 | Msa0309060:three_prime_UTR |
AGCTCCATTATGTTGTAATC+GGG | 0.460436 | 2_4:-3485242 | Msa0309060:three_prime_UTR |
CTTATGTTGCACTTGAGCTT+AGG | 0.464636 | 2_4:-3484843 | Msa0309060:three_prime_UTR |
CGGCAGCTGGACCTGTGATT+CGG | 0.465355 | 2_4:+3485535 | None:intergenic |
AAGCAATTTAAAATGTTGTA+GGG | 0.473646 | 2_4:-3484776 | Msa0309060:three_prime_UTR |
GAAAGGAAGAAACGGAACTT+TGG | 0.478743 | 2_4:-3489700 | Msa0309060:five_prime_UTR |
ATAGTAAAGGTCCGAATCAC+AGG | 0.485942 | 2_4:-3485546 | Msa0309060:CDS |
GACATTATACTATTATAGTC+AGG | 0.489661 | 2_4:+3485194 | None:intergenic |
TGGAGTGTCAAAACTATTTG+TGG | 0.490292 | 2_4:-3484927 | Msa0309060:three_prime_UTR |
TAGCAGCTGAACTGCTGCTA+TGG | 0.490395 | 2_4:+3485458 | None:intergenic |
GCACCACCACACCTTGCATC+GGG | 0.494394 | 2_4:+3489488 | None:intergenic |
TTCATCATTTAGCTCGAGAC+CGG | 0.495683 | 2_4:+3487568 | None:intergenic |
TCTGTTATGACAATGAAAAT+GGG | 0.498234 | 2_4:-3487659 | Msa0309060:CDS |
AAAGGCCGAAAAGAAAAGAA+AGG | 0.502595 | 2_4:-3489717 | None:intergenic |
ATCGGAATGAGATTTGGAAA+TGG | 0.503286 | 2_4:-3484947 | Msa0309060:three_prime_UTR |
AGAAGAAGAAGAAGGTTGAA+GGG | 0.503550 | 2_4:+3489438 | None:intergenic |
TTCCACCAGCTGCCCCTACC+AGG | 0.506704 | 2_4:+3485598 | None:intergenic |
ACAGTCATGACACCGGCAGC+TGG | 0.515392 | 2_4:+3485522 | None:intergenic |
TTGAAGTTACAGGGTGCCTG+TGG | 0.517377 | 2_4:-3487695 | Msa0309060:CDS |
AATTAAGGCCGTACCTGGTA+GGG | 0.517939 | 2_4:-3485611 | Msa0309060:CDS |
AGCTGAATTTGGAGTGGCAA+CGG | 0.519177 | 2_4:+3487835 | None:intergenic |
CGAATCACAGGTCCAGCTGC+CGG | 0.519813 | 2_4:-3485534 | Msa0309060:CDS |
GAAACGGAACTTTGGTGGGT+GGG | 0.523620 | 2_4:-3489692 | Msa0309060:five_prime_UTR |
AGCACCACCACACCTTGCAT+CGG | 0.529473 | 2_4:+3489487 | None:intergenic |
GTTCGACTGCGACTATTTCA+GGG | 0.533343 | 2_4:+3487609 | None:intergenic |
TTCATTGTCATAACAGAACT+CGG | 0.533887 | 2_4:+3487665 | None:intergenic |
GAATTAAGGCCGTACCTGGT+AGG | 0.540850 | 2_4:-3485612 | Msa0309060:CDS |
CCAGCTGCCCCTACCAGGTA+CGG | 0.552725 | 2_4:+3485603 | None:intergenic |
CCGGTAACTGATGAAGAAAC+CGG | 0.553976 | 2_4:-3487587 | Msa0309060:CDS |
TGTTGTCCTAAAAGAAACAT+TGG | 0.558584 | 2_4:+3489303 | None:intergenic |
ATGTCATACTTCATTCCCAT+TGG | 0.560839 | 2_4:+3485369 | None:intergenic |
AGGAAGAAACGGAACTTTGG+TGG | 0.562446 | 2_4:-3489697 | Msa0309060:five_prime_UTR |
AATTGAGGAGCCAATAGTAA+AGG | 0.562850 | 2_4:-3485559 | Msa0309060:CDS |
AGAGGAATTAAGGCCGTACC+TGG | 0.564029 | 2_4:-3485616 | Msa0309060:CDS |
TTGACTGTAATAATAATGGA+AGG | 0.568999 | 2_4:+3485296 | None:intergenic |
ACCAAACGGACGTGTATGAA+AGG | 0.569126 | 2_4:+3489246 | None:intergenic |
TGTTTGGGTGGTGACGTGAC+TGG | 0.575500 | 2_4:-3489649 | Msa0309060:intron |
GAAAATCAGCACCCGATGCA+AGG | 0.579496 | 2_4:-3489499 | Msa0309060:exon |
CGGACGTGTATGAAAGGAAA+GGG | 0.582467 | 2_4:+3489252 | None:intergenic |
TACCTGGTAGGGGCAGCTGG+TGG | 0.585925 | 2_4:-3485600 | Msa0309060:CDS |
AAAGGGAAGGACGCGGCAGA+AGG | 0.586202 | 2_4:+3489269 | None:intergenic |
GTGACTGTTTCAGGTTCTAG+AGG | 0.588325 | 2_4:-3485634 | Msa0309060:intron |
ATTAAGGCCGTACCTGGTAG+GGG | 0.594661 | 2_4:-3485610 | Msa0309060:CDS |
CCACCGTCTGATATGAGATA+CGG | 0.596291 | 2_4:+3487758 | None:intergenic |
ACGGAACTTTGGTGGGTGGG+TGG | 0.603618 | 2_4:-3489689 | Msa0309060:five_prime_UTR |
TGAAAATGTAGAAACTGTGT+TGG | 0.605986 | 2_4:-3487792 | Msa0309060:CDS |
GGAAGAAACGGAACTTTGGT+GGG | 0.606856 | 2_4:-3489696 | Msa0309060:five_prime_UTR |
AAATGATGAAAATATAGAGA+AGG | 0.609423 | 2_4:-3487555 | Msa0309060:intron |
TGAAGTTACAGGGTGCCTGT+GGG | 0.613999 | 2_4:-3487694 | Msa0309060:CDS |
TTCCACAGCTGAATTTGGAG+TGG | 0.615913 | 2_4:+3487829 | None:intergenic |
AGAACTCGGACACGACCCAC+AGG | 0.616393 | 2_4:+3487679 | None:intergenic |
AAATCGATGGCAATGTTGTA+CGG | 0.617193 | 2_4:-3487718 | Msa0309060:CDS |
GTGATGGAAGAAGAAGAAGA+AGG | 0.618429 | 2_4:+3489430 | None:intergenic |
AGTACGGGGTTTAAAGGACG+AGG | 0.621139 | 2_4:-3484884 | Msa0309060:three_prime_UTR |
GCACCCGATGCAAGGTGTGG+TGG | 0.624441 | 2_4:-3489491 | Msa0309060:exon |
ACGGACGTGTATGAAAGGAA+AGG | 0.624764 | 2_4:+3489251 | None:intergenic |
GTCGCTCTACATGAAATCGA+TGG | 0.627147 | 2_4:-3487731 | Msa0309060:CDS |
TGCCACTCCAAATTCAGCTG+TGG | 0.629430 | 2_4:-3487831 | Msa0309060:CDS |
GTTGTACGGTTGAAGTTACA+GGG | 0.634834 | 2_4:-3487704 | Msa0309060:CDS |
ATGCTATGTCTGAATTGTAT+CGG | 0.636868 | 2_4:-3484965 | Msa0309060:intron |
TCAACCACTAATAGAATTTG+GGG | 0.638422 | 2_4:+3484752 | None:intergenic |
AGAAACGGAACTTTGGTGGG+TGG | 0.642107 | 2_4:-3489693 | Msa0309060:five_prime_UTR |
CGGCCGTATCTCATATCAGA+CGG | 0.648569 | 2_4:-3487761 | Msa0309060:CDS |
GCACTTGAGCTTAGGCAGAG+AGG | 0.650533 | 2_4:-3484835 | Msa0309060:three_prime_UTR |
AACACGCACAGTCATGACAC+CGG | 0.653006 | 2_4:+3485515 | None:intergenic |
AAGAACTTAACGCTATCAAG+TGG | 0.653517 | 2_4:-3485063 | Msa0309060:three_prime_UTR |
GATTGGCGATGGTGTTTGGG+TGG | 0.654488 | 2_4:-3489661 | Msa0309060:five_prime_UTR |
AAAATCATCAATTATCTGTG+AGG | 0.656996 | 2_4:-3484812 | Msa0309060:three_prime_UTR |
TCAGCACCCGATGCAAGGTG+TGG | 0.661795 | 2_4:-3489494 | Msa0309060:exon |
TGAAAGGAAAGGGAAGGACG+CGG | 0.666949 | 2_4:+3489262 | None:intergenic |
CGTGTATGAAAGGAAAGGGA+AGG | 0.668106 | 2_4:+3489256 | None:intergenic |
GTGATATTATTGCTAGTACG+GGG | 0.670503 | 2_4:-3484898 | Msa0309060:three_prime_UTR |
CCGTATCTCATATCAGACGG+TGG | 0.699947 | 2_4:-3487758 | Msa0309060:CDS |
CRISPR-GE
badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
---|---|---|---|---|---|
!! | ATAATATAATAATTAAAACG+AGG | + | chr2_4:3485115-3485134 | None:intergenic | 10.0% |
!!! | AGTTTTTAAAAATTGTTTTT+GGG | + | chr2_4:3487994-3488013 | None:intergenic | 10.0% |
!!! | TAGTTTTTAAAAATTGTTTT+TGG | + | chr2_4:3487995-3488014 | None:intergenic | 10.0% |
!!! | AAAACTAATATTTTTTATGA+AGG | - | chr2_4:3488008-3488027 | Msa0309060:intron | 10.0% |
!!! | AAACTAATATTTTTTATGAA+GGG | - | chr2_4:3488009-3488028 | Msa0309060:intron | 10.0% |
!!! | CATAATTTTTATAAATCATA+GGG | + | chr2_4:3488052-3488071 | None:intergenic | 10.0% |
!!! | ACATAATTTTTATAAATCAT+AGG | + | chr2_4:3488053-3488072 | None:intergenic | 10.0% |
!!! | TGTGTTAATTTTTTTTTAAA+GGG | + | chr2_4:3488137-3488156 | None:intergenic | 10.0% |
!! | TGATTGATTAATTGATTATT+AGG | - | chr2_4:3484882-3484901 | Msa0309060:three_prime_UTR | 15.0% |
!!! | ATTTGATTTTGATTTTGATT+TGG | - | chr2_4:3484942-3484961 | Msa0309060:three_prime_UTR | 15.0% |
!! | TTTAATTGAAGAAAAATAGT+TGG | + | chr2_4:3485445-3485464 | None:intergenic | 15.0% |
!! | TATATTAGAAAACTTATGAA+AGG | + | chr2_4:3485603-3485622 | None:intergenic | 15.0% |
!! | CTTATGAAAATATGTTAAAA+GGG | + | chr2_4:3485760-3485779 | None:intergenic | 15.0% |
!! | ACTTATGAAAATATGTTAAA+AGG | + | chr2_4:3485761-3485780 | None:intergenic | 15.0% |
!! | CTTTACAACTTAAATAATAT+AGG | - | chr2_4:3487531-3487550 | Msa0309060:intron | 15.0% |
!!! | GTGTGTTAATTTTTTTTTAA+AGG | + | chr2_4:3488138-3488157 | None:intergenic | 15.0% |
!! | TAACTAAATAACTAACCAAA+CGG | + | chr2_4:3485240-3485259 | None:intergenic | 20.0% |
!! | AGAAATATTGAAGTTGAATT+TGG | + | chr2_4:3486514-3486533 | None:intergenic | 20.0% |
!! | TTAATATAACAACTCAGTTT+CGG | - | chr2_4:3486551-3486570 | Msa0309060:intron | 20.0% |
!! | AAATGATGAAAATATAGAGA+AGG | - | chr2_4:3486914-3486933 | Msa0309060:intron | 20.0% |
!! | ACATAATGAACATTCAAATA+TGG | + | chr2_4:3486995-3487014 | None:intergenic | 20.0% |
!!! | GAAAATTTATAGCGTATTTT+AGG | - | chr2_4:3487028-3487047 | Msa0309060:intron | 20.0% |
!! | ATGAAAAAAATATAGCATCT+AGG | - | chr2_4:3487185-3487204 | Msa0309060:intron | 20.0% |
!! | TGAAAAAAATATAGCATCTA+GGG | - | chr2_4:3487186-3487205 | Msa0309060:intron | 20.0% |
!! | TGTGGTGTATAATATAATAA+AGG | - | chr2_4:3487348-3487367 | Msa0309060:intron | 20.0% |
!! | ATTTAAAGAGATATGTAACT+CGG | - | chr2_4:3487399-3487418 | Msa0309060:intron | 20.0% |
!!! | TTAGATATATGTTTTCGAAT+TGG | - | chr2_4:3487468-3487487 | Msa0309060:intron | 20.0% |
!! | CAGAAATTTAATCCTATTAT+TGG | + | chr2_4:3487747-3487766 | None:intergenic | 20.0% |
!!! | ACTTCTTTTCATAATAGAAA+GGG | - | chr2_4:3487774-3487793 | Msa0309060:CDS | 20.0% |
!!! | TAATATTTTTTATGAAGGGT+TGG | - | chr2_4:3488013-3488032 | Msa0309060:intron | 20.0% |
!!! | ATTTTTATAAATCATAGGGT+TGG | + | chr2_4:3488048-3488067 | None:intergenic | 20.0% |
!!! | TAGCTATATTTTCTTTTTTG+AGG | - | chr2_4:3489336-3489355 | Msa0309060:intron | 20.0% |
!!! | AGCTATATTTTCTTTTTTGA+GGG | - | chr2_4:3489337-3489356 | Msa0309060:intron | 20.0% |
!!! | TAAGCAATTTAAAATGTTGT+AGG | - | chr2_4:3489692-3489711 | Msa0309060:five_prime_UTR | 20.0% |
!!! | AAGCAATTTAAAATGTTGTA+GGG | - | chr2_4:3489693-3489712 | Msa0309060:five_prime_UTR | 20.0% |
! | ATTAATCAATCAATCACGAA+AGG | + | chr2_4:3484874-3484893 | None:intergenic | 25.0% |
! | AAATAGTTGGAATTTGAAGA+GGG | + | chr2_4:3485432-3485451 | None:intergenic | 25.0% |
! | AAAATAGTTGGAATTTGAAG+AGG | + | chr2_4:3485433-3485452 | None:intergenic | 25.0% |
! | TTCCTCTAACAAAAGATAAA+GGG | + | chr2_4:3486090-3486109 | None:intergenic | 25.0% |
! | TTTCCTCTAACAAAAGATAA+AGG | + | chr2_4:3486091-3486110 | None:intergenic | 25.0% |
! | ATAAGCTATAGTAGAAAAGT+TGG | - | chr2_4:3486130-3486149 | Msa0309060:intron | 25.0% |
!!! | TAGAAAAGTTGGTAGAAAAT+AGG | - | chr2_4:3486141-3486160 | Msa0309060:intron | 25.0% |
!! | GTTTCTCTAATAGTTTTCTT+AGG | + | chr2_4:3486266-3486285 | None:intergenic | 25.0% |
! | AACCATTAGAAAAGATTTAG+AGG | - | chr2_4:3486283-3486302 | Msa0309060:intron | 25.0% |
! | GTTCTATCAAAAACCATATT+TGG | + | chr2_4:3486323-3486342 | None:intergenic | 25.0% |
!! | TGGTTTTTGATAGAACATTA+TGG | - | chr2_4:3486327-3486346 | Msa0309060:intron | 25.0% |
!! | TTTTTGATAGAACATTATGG+CGG | - | chr2_4:3486330-3486349 | Msa0309060:intron | 25.0% |
! | AATAATGAAGATCACATGTT+AGG | + | chr2_4:3486593-3486612 | None:intergenic | 25.0% |
! | TTATGTTTGTACAGCTATAA+AGG | - | chr2_4:3486611-3486630 | Msa0309060:intron | 25.0% |
! | TTCTGTTATGACAATGAAAA+TGG | - | chr2_4:3486809-3486828 | Msa0309060:intron | 25.0% |
! | TCTGTTATGACAATGAAAAT+GGG | - | chr2_4:3486810-3486829 | Msa0309060:intron | 25.0% |
! | AAATTGAAGCATATAGTACT+TGG | - | chr2_4:3487127-3487146 | Msa0309060:intron | 25.0% |
! | AATTGAAGCATATAGTACTT+GGG | - | chr2_4:3487128-3487147 | Msa0309060:intron | 25.0% |
! | AAATTGAAGCATATAGTACT+TGG | - | chr2_4:3487127-3487146 | Msa0309060:intron | 25.0% |
! | AATTGAAGCATATAGTACTT+GGG | - | chr2_4:3487128-3487147 | Msa0309060:intron | 25.0% |
!!! | TTTACTTTTGAAAACACTTG+TGG | - | chr2_4:3487330-3487349 | Msa0309060:intron | 25.0% |
! | AAACGATATACAGGTAAATT+TGG | + | chr2_4:3487567-3487586 | None:intergenic | 25.0% |
! | ATCAGATTTAGAAACCAAAA+TGG | - | chr2_4:3487640-3487659 | Msa0309060:CDS | 25.0% |
! | TATTATGAAAAGAAGTCAAG+AGG | + | chr2_4:3487770-3487789 | None:intergenic | 25.0% |
!! | GACTTCTTTTCATAATAGAA+AGG | - | chr2_4:3487773-3487792 | Msa0309060:CDS | 25.0% |
!! | CTTCTTTTCATAATAGAAAG+GGG | - | chr2_4:3487775-3487794 | Msa0309060:CDS | 25.0% |
!!! | TCTTTTTTCATTTTCTCTTG+GGG | + | chr2_4:3487863-3487882 | None:intergenic | 25.0% |
!!! | CTCTTTTTTCATTTTCTCTT+GGG | + | chr2_4:3487864-3487883 | None:intergenic | 25.0% |
!!! | TCTCTTTTTTCATTTTCTCT+TGG | + | chr2_4:3487865-3487884 | None:intergenic | 25.0% |
!!! | ATTTTTCAGAACAGAAAAAC+AGG | + | chr2_4:3487910-3487929 | None:intergenic | 25.0% |
! | TTGTGAAATTCAAACCATTT+GGG | - | chr2_4:3488311-3488330 | Msa0309060:intron | 25.0% |
!! | TTTCTTTTAATGAAACGCAT+GGG | + | chr2_4:3488571-3488590 | None:intergenic | 25.0% |
!! | TAATTTTTCATGAACACCAA+TGG | - | chr2_4:3489084-3489103 | Msa0309060:intron | 25.0% |
!! | AATTTTTCATGAACACCAAT+GGG | - | chr2_4:3489085-3489104 | Msa0309060:intron | 25.0% |
!! | TTGACTGTAATAATAATGGA+AGG | + | chr2_4:3489176-3489195 | None:intergenic | 25.0% |
! | GACTTTGACTGTAATAATAA+TGG | + | chr2_4:3489180-3489199 | None:intergenic | 25.0% |
! | GACATTATACTATTATAGTC+AGG | + | chr2_4:3489278-3489297 | None:intergenic | 25.0% |
! | AAAATCATCAATTATCTGTG+AGG | - | chr2_4:3489657-3489676 | Msa0309060:five_prime_UTR | 25.0% |
! | AATGAAACCTACCTTTTTGA+GGG | + | chr2_4:3485064-3485083 | None:intergenic | 30.0% |
! | AAATGAAACCTACCTTTTTG+AGG | + | chr2_4:3485065-3485084 | None:intergenic | 30.0% |
!! | TATACTTTCTTTGTTGTTGC+AGG | - | chr2_4:3485134-3485153 | Msa0309060:three_prime_UTR | 30.0% |
!! | ATACTTTCTTTGTTGTTGCA+GGG | - | chr2_4:3485135-3485154 | Msa0309060:three_prime_UTR | 30.0% |
TGTTGTCCTAAAAGAAACAT+TGG | + | chr2_4:3485169-3485188 | None:intergenic | 30.0% | |
TATTTAGTTACCTACTTCCA+AGG | - | chr2_4:3485250-3485269 | Msa0309060:three_prime_UTR | 30.0% | |
ACAGACAGTTATGATGAATA+TGG | + | chr2_4:3485276-3485295 | None:intergenic | 30.0% | |
ATCATAACTGTCTGTATGTT+TGG | - | chr2_4:3485281-3485300 | Msa0309060:three_prime_UTR | 30.0% | |
GTCACTTATACATAAATGCA+TGG | + | chr2_4:3485358-3485377 | None:intergenic | 30.0% | |
TGACTAACAAACTAACCAAA+TGG | + | chr2_4:3485396-3485415 | None:intergenic | 30.0% | |
AATAGTTGGAATTTGAAGAG+GGG | + | chr2_4:3485431-3485450 | None:intergenic | 30.0% | |
AAACTTATGCTGTCTCAAAT+GGG | + | chr2_4:3485514-3485533 | None:intergenic | 30.0% | |
AAAACTTATGCTGTCTCAAA+TGG | + | chr2_4:3485515-3485534 | None:intergenic | 30.0% | |
!! | ATAAGTTTTGTGAGACTGTT+TGG | - | chr2_4:3485526-3485545 | Msa0309060:CDS | 30.0% |
!! | TAAGTTTTGTGAGACTGTTT+GGG | - | chr2_4:3485527-3485546 | Msa0309060:CDS | 30.0% |
AATAAGCTGTTTATCCAAAC+AGG | - | chr2_4:3485734-3485753 | Msa0309060:intron | 30.0% | |
AGTTATTTGAGTATATCCGT+TGG | + | chr2_4:3486054-3486073 | None:intergenic | 30.0% | |
! | GACCTCTAAATCTTTTCTAA+TGG | + | chr2_4:3486288-3486307 | None:intergenic | 30.0% |
TACATGAATGTGAATAAGCA+TGG | - | chr2_4:3486472-3486491 | Msa0309060:intron | 30.0% | |
! | TCTACATTTTCAGCAGTTAA+TGG | + | chr2_4:3486669-3486688 | None:intergenic | 30.0% |
TGAAAATGTAGAAACTGTGT+TGG | - | chr2_4:3486677-3486696 | Msa0309060:intron | 30.0% | |
AAACTGTGTTGGATGAAATT+CGG | - | chr2_4:3486688-3486707 | Msa0309060:intron | 30.0% | |
TTCATTGTCATAACAGAACT+CGG | + | chr2_4:3486807-3486826 | None:intergenic | 30.0% | |
!! | CGTTTACATAAGCTTTAAGA+GGG | - | chr2_4:3487079-3487098 | Msa0309060:intron | 30.0% |
!! | AGGCCTGATAAATTTGTTTT+CGG | - | chr2_4:3487368-3487387 | Msa0309060:intron | 30.0% |
GATCCGAAAACAAATTTATC+AGG | + | chr2_4:3487374-3487393 | None:intergenic | 30.0% | |
TCAACTGTTATGCCAATAAT+AGG | - | chr2_4:3487732-3487751 | Msa0309060:CDS | 30.0% | |
! | CTCTGCTTCTATTTTGTAAA+AGG | + | chr2_4:3487826-3487845 | None:intergenic | 30.0% |
AAAAGAGAACAAAAACAACC+TGG | - | chr2_4:3487877-3487896 | Msa0309060:intron | 30.0% | |
TATATGGCTATCAAGACATA+TGG | + | chr2_4:3488079-3488098 | None:intergenic | 30.0% | |
! | GATCTGATAATTGACTTCAA+AGG | - | chr2_4:3488204-3488223 | Msa0309060:intron | 30.0% |
GTTGTGAAATTCAAACCATT+TGG | - | chr2_4:3488310-3488329 | Msa0309060:intron | 30.0% | |
AATTCTGTACACTGTCTATT+TGG | - | chr2_4:3488476-3488495 | Msa0309060:intron | 30.0% | |
! | CTTTCTTTTAATGAAACGCA+TGG | + | chr2_4:3488572-3488591 | None:intergenic | 30.0% |
TTTCTGTACATGTAGGATTA+TGG | - | chr2_4:3488637-3488656 | Msa0309060:intron | 30.0% | |
TAATATGTAGTGACTGTTTC+AGG | - | chr2_4:3488826-3488845 | Msa0309060:intron | 30.0% | |
! | ATCATAATGTTTTCACACAG+TGG | - | chr2_4:3489144-3489163 | Msa0309060:intron | 30.0% |
TAGCTCCATTATGTTGTAAT+CGG | - | chr2_4:3489226-3489245 | Msa0309060:intron | 30.0% | |
AAATCCCGATTACAACATAA+TGG | + | chr2_4:3489234-3489253 | None:intergenic | 30.0% | |
!! | TGTAATCGGGATTTTTAGAA+TGG | - | chr2_4:3489240-3489259 | Msa0309060:intron | 30.0% |
ATGCTATGTCTGAATTGTAT+CGG | - | chr2_4:3489454-3489473 | Msa0309060:CDS | 30.0% | |
AATTGTATCGGAACAAGATT+TGG | - | chr2_4:3489466-3489485 | Msa0309060:CDS | 30.0% | |
ATGCTATGTCTGAATTGTAT+CGG | - | chr2_4:3489454-3489473 | Msa0309060:CDS | 30.0% | |
AATTGTATCGGAATGAGATT+TGG | - | chr2_4:3489516-3489535 | Msa0309060:intron | 30.0% | |
TCGTGATATTATTGCTAGTA+CGG | - | chr2_4:3489569-3489588 | Msa0309060:intron | 30.0% | |
ATCAATCACGAAAGGAAATG+AGG | + | chr2_4:3484866-3484885 | None:intergenic | 35.0% | |
ACGAAACGAAACGAAAGAAA+AGG | - | chr2_4:3484919-3484938 | Msa0309060:three_prime_UTR | 35.0% | |
AGAAGAAGAAGAAGGTTGAA+GGG | + | chr2_4:3485034-3485053 | None:intergenic | 35.0% | |
AAGAAGAAGAAGAAGGTTGA+AGG | + | chr2_4:3485035-3485054 | None:intergenic | 35.0% | |
! | CTGGTACCAATGTTTCTTTT+AGG | - | chr2_4:3485160-3485179 | Msa0309060:three_prime_UTR | 35.0% |
AGTTATGATGAATATGGCCT+TGG | + | chr2_4:3485270-3485289 | None:intergenic | 35.0% | |
TTCAACGATACACATCCATT+TGG | - | chr2_4:3485378-3485397 | Msa0309060:three_prime_UTR | 35.0% | |
!! | AAGTTTTGTGAGACTGTTTG+GGG | - | chr2_4:3485528-3485547 | Msa0309060:CDS | 35.0% |
! | GCTATAGAAGTAGCTTTTGT+AGG | - | chr2_4:3485679-3485698 | Msa0309060:intron | 35.0% |
ATATGTTAAAAGGGCCTGTT+TGG | + | chr2_4:3485751-3485770 | None:intergenic | 35.0% | |
TCTCACAAAACTTATGCCAA+CGG | - | chr2_4:3486035-3486054 | Msa0309060:intron | 35.0% | |
CAAAAGATAAAGGGTCTGTT+TGG | + | chr2_4:3486081-3486100 | None:intergenic | 35.0% | |
! | GACCCTTTATCTTTTGTTAG+AGG | - | chr2_4:3486085-3486104 | Msa0309060:intron | 35.0% |
TGGTAGAAAATAGGCTTAGA+TGG | - | chr2_4:3486150-3486169 | Msa0309060:intron | 35.0% | |
GAAAATAGGCTTAGATGGTT+TGG | - | chr2_4:3486155-3486174 | Msa0309060:intron | 35.0% | |
TTGATCTACTCTTCTTACCA+CGG | + | chr2_4:3486207-3486226 | None:intergenic | 35.0% | |
GGTAAGAAGAGTAGATCAAA+TGG | - | chr2_4:3486208-3486227 | Msa0309060:intron | 35.0% | |
AAGAAGAGTAGATCAAATGG+AGG | - | chr2_4:3486211-3486230 | Msa0309060:intron | 35.0% | |
AGATTTAGAGGTCAATGAGT+TGG | - | chr2_4:3486295-3486314 | Msa0309060:intron | 35.0% | |
! | CAATGAGTTGGATCCAAATA+TGG | - | chr2_4:3486307-3486326 | Msa0309060:intron | 35.0% |
AACAACTCAGTTTCGGAAAT+TGG | - | chr2_4:3486558-3486577 | Msa0309060:intron | 35.0% | |
ACAACTCAGTTTCGGAAATT+GGG | - | chr2_4:3486559-3486578 | Msa0309060:intron | 35.0% | |
AAATCGATGGCAATGTTGTA+CGG | - | chr2_4:3486751-3486770 | Msa0309060:intron | 35.0% | |
!! | GCGTTTACATAAGCTTTAAG+AGG | - | chr2_4:3487078-3487097 | Msa0309060:intron | 35.0% |
!!! | GCAGAAGTACCATGTTTTAT+GGG | - | chr2_4:3487662-3487681 | Msa0309060:CDS | 35.0% |
TCACTCTAACCCATAAAACA+TGG | + | chr2_4:3487674-3487693 | None:intergenic | 35.0% | |
!! | TTTATGGGTTAGAGTGACAA+AGG | - | chr2_4:3487677-3487696 | Msa0309060:CDS | 35.0% |
ATATAACACTCACCAATCGA+GGG | - | chr2_4:3488094-3488113 | Msa0309060:intron | 35.0% | |
! | ACACCTGTAGTTGAAGTTTT+TGG | - | chr2_4:3488154-3488173 | Msa0309060:intron | 35.0% |
! | CACCTGTAGTTGAAGTTTTT+GGG | - | chr2_4:3488155-3488174 | Msa0309060:intron | 35.0% |
ATGTGTAACTTCATCCCAAA+TGG | + | chr2_4:3488328-3488347 | None:intergenic | 35.0% | |
AAGGCTAGACATTTACTAAC+TGG | + | chr2_4:3488438-3488457 | None:intergenic | 35.0% | |
TGAGTAACAGCAACAGTTAA+AGG | + | chr2_4:3488457-3488476 | None:intergenic | 35.0% | |
!! | ATTTGGTGGTATGGGATTTT+AGG | - | chr2_4:3488493-3488512 | Msa0309060:intron | 35.0% |
TGAATTCTAACCAACGTACA+CGG | + | chr2_4:3488604-3488623 | None:intergenic | 35.0% | |
AGGATTATGGTTATTGAGTC+TGG | - | chr2_4:3488650-3488669 | Msa0309060:intron | 35.0% | |
!! | TTCAGGTTCTAGAGGAATTA+AGG | - | chr2_4:3488843-3488862 | Msa0309060:intron | 35.0% |
! | TCTTGAATTGGTAGCAATTG+AGG | - | chr2_4:3488895-3488914 | Msa0309060:intron | 35.0% |
AATTGAGGAGCCAATAGTAA+AGG | - | chr2_4:3488910-3488929 | Msa0309060:intron | 35.0% | |
! | GTTCAGCTGCTATGATATTT+TGG | - | chr2_4:3489022-3489041 | Msa0309060:intron | 35.0% |
ATGTCATACTTCATTCCCAT+TGG | + | chr2_4:3489103-3489122 | None:intergenic | 35.0% | |
! | ATAATGTTTTCACACAGTGG+AGG | - | chr2_4:3489147-3489166 | Msa0309060:intron | 35.0% |
AGCTCCATTATGTTGTAATC+GGG | - | chr2_4:3489227-3489246 | Msa0309060:intron | 35.0% | |
TTCCATTAGTGGCAACATTA+TGG | + | chr2_4:3489387-3489406 | None:intergenic | 35.0% | |
CGTTAAGTTCTTTCCATTAG+TGG | + | chr2_4:3489398-3489417 | None:intergenic | 35.0% | |
AAGAACTTAACGCTATCAAG+TGG | - | chr2_4:3489406-3489425 | Msa0309060:intron | 35.0% | |
ATCGGAATGAGATTTGGAAA+TGG | - | chr2_4:3489522-3489541 | Msa0309060:intron | 35.0% | |
! | TGGAGTGTCAAAACTATTTG+TGG | - | chr2_4:3489542-3489561 | Msa0309060:intron | 35.0% |
CGTGATATTATTGCTAGTAC+GGG | - | chr2_4:3489570-3489589 | Msa0309060:intron | 35.0% | |
GTGATATTATTGCTAGTACG+GGG | - | chr2_4:3489571-3489590 | Msa0309060:intron | 35.0% | |
GACGAGGTTGTTTGTATATT+TGG | - | chr2_4:3489601-3489620 | Msa0309060:intron | 35.0% | |
GAAAGGAAGAAACGGAACTT+TGG | - | chr2_4:3484769-3484788 | Msa0309060:three_prime_UTR | 40.0% | |
AATCACGAAAGGAAATGAGG+AGG | + | chr2_4:3484863-3484882 | None:intergenic | 40.0% | |
! | GTGATGGAAGAAGAAGAAGA+AGG | + | chr2_4:3485042-3485061 | None:intergenic | 40.0% |
TTCTTCCATCACCCTCAAAA+AGG | - | chr2_4:3485050-3485069 | Msa0309060:three_prime_UTR | 40.0% | |
! | ATGAATATGGCCTTGGAAGT+AGG | + | chr2_4:3485263-3485282 | None:intergenic | 40.0% |
ATGCTGTCTCAAATGGGATT+GGG | + | chr2_4:3485508-3485527 | None:intergenic | 40.0% | |
TATGCTGTCTCAAATGGGAT+TGG | + | chr2_4:3485509-3485528 | None:intergenic | 40.0% | |
!! | AGTTTTGTGAGACTGTTTGG+GGG | - | chr2_4:3485529-3485548 | Msa0309060:CDS | 40.0% |
AGTCAGGTTAAAAGAGGTAG+AGG | - | chr2_4:3486236-3486255 | Msa0309060:intron | 40.0% | |
AATGTGAATAAGCATGGCAC+TGG | - | chr2_4:3486478-3486497 | Msa0309060:intron | 40.0% | |
TGTTGTACGGTTGAAGTTAC+AGG | - | chr2_4:3486764-3486783 | Msa0309060:intron | 40.0% | |
GTTGTACGGTTGAAGTTACA+GGG | - | chr2_4:3486765-3486784 | Msa0309060:intron | 40.0% | |
! | TTCATCATTTAGCTCGAGAC+CGG | + | chr2_4:3486904-3486923 | None:intergenic | 40.0% |
TGAAGCATATAGTACTTGGG+CGG | - | chr2_4:3487131-3487150 | Msa0309060:intron | 40.0% | |
TGAAGCATATAGTACTTGGG+CGG | - | chr2_4:3487131-3487150 | Msa0309060:intron | 40.0% | |
GGTAGGCTTAAACGATATAC+AGG | + | chr2_4:3487576-3487595 | None:intergenic | 40.0% | |
!! | ACATGGTACTTCTGCCATTT+TGG | + | chr2_4:3487657-3487676 | None:intergenic | 40.0% |
!!! | GGCAGAAGTACCATGTTTTA+TGG | - | chr2_4:3487661-3487680 | Msa0309060:CDS | 40.0% |
AGAAAGGGGATGAGTAATTG+AGG | - | chr2_4:3487789-3487808 | Msa0309060:CDS | 40.0% | |
AGAGAACAAAAACAACCTGG+AGG | - | chr2_4:3487880-3487899 | Msa0309060:intron | 40.0% | |
CTCGATTGGTGAGTGTTATA+TGG | + | chr2_4:3488095-3488114 | None:intergenic | 40.0% | |
CATATAACACTCACCAATCG+AGG | - | chr2_4:3488093-3488112 | Msa0309060:intron | 40.0% | |
CTCCCAAAAACTTCAACTAC+AGG | + | chr2_4:3488160-3488179 | None:intergenic | 40.0% | |
CTAACTGGCTACTTCTTACA+AGG | + | chr2_4:3488423-3488442 | None:intergenic | 40.0% | |
TCTGTACACTGTCTATTTGG+TGG | - | chr2_4:3488479-3488498 | Msa0309060:intron | 40.0% | |
! | ACACTGTCTATTTGGTGGTA+TGG | - | chr2_4:3488484-3488503 | Msa0309060:intron | 40.0% |
! | CACTGTCTATTTGGTGGTAT+GGG | - | chr2_4:3488485-3488504 | Msa0309060:intron | 40.0% |
! | CTGCGTTTTTCTGTACATGT+AGG | - | chr2_4:3488630-3488649 | Msa0309060:intron | 40.0% |
! | GTGATTCGGACCTTTACTAT+TGG | + | chr2_4:3488923-3488942 | None:intergenic | 40.0% |
ATAGTAAAGGTCCGAATCAC+AGG | - | chr2_4:3488923-3488942 | Msa0309060:intron | 40.0% | |
CTCCATAATGTTGCCACTAA+TGG | - | chr2_4:3489382-3489401 | Msa0309060:intron | 40.0% | |
ATTGCTAGTACGGGGTTTAA+AGG | - | chr2_4:3489579-3489598 | Msa0309060:intron | 40.0% | |
CTTATGTTGCACTTGAGCTT+AGG | - | chr2_4:3489626-3489645 | Msa0309060:intron | 40.0% | |
AGGAAGAAACGGAACTTTGG+TGG | - | chr2_4:3484772-3484791 | Msa0309060:three_prime_UTR | 45.0% | |
GGAAGAAACGGAACTTTGGT+GGG | - | chr2_4:3484773-3484792 | Msa0309060:three_prime_UTR | 45.0% | |
TGACGTGACTGGTGAGAATT+TGG | - | chr2_4:3484831-3484850 | Msa0309060:three_prime_UTR | 45.0% | |
TCCATCACCCTCAAAAAGGT+AGG | - | chr2_4:3485054-3485073 | Msa0309060:three_prime_UTR | 45.0% | |
!! | ACCTACCTTTTTGAGGGTGA+TGG | + | chr2_4:3485058-3485077 | None:intergenic | 45.0% |
CGTGTATGAAAGGAAAGGGA+AGG | + | chr2_4:3485216-3485235 | None:intergenic | 45.0% | |
CGGACGTGTATGAAAGGAAA+GGG | + | chr2_4:3485220-3485239 | None:intergenic | 45.0% | |
ACGGACGTGTATGAAAGGAA+AGG | + | chr2_4:3485221-3485240 | None:intergenic | 45.0% | |
TCCTTTCATACACGTCCGTT+TGG | - | chr2_4:3485222-3485241 | Msa0309060:three_prime_UTR | 45.0% | |
ACCAAACGGACGTGTATGAA+AGG | + | chr2_4:3485226-3485245 | None:intergenic | 45.0% | |
AGATCAAATGGAGGAGAGTC+AGG | - | chr2_4:3486220-3486239 | Msa0309060:intron | 45.0% | |
GAGGAGAGTCAGGTTAAAAG+AGG | - | chr2_4:3486230-3486249 | Msa0309060:intron | 45.0% | |
AACGCCTTATCCCACTAAGT+GGG | + | chr2_4:3486377-3486396 | None:intergenic | 45.0% | |
AGTTTCGGAAATTGGGAGCT+GGG | - | chr2_4:3486566-3486585 | Msa0309060:intron | 45.0% | |
! | AGCTGAATTTGGAGTGGCAA+CGG | + | chr2_4:3486637-3486656 | None:intergenic | 45.0% |
TTCCACAGCTGAATTTGGAG+TGG | + | chr2_4:3486643-3486662 | None:intergenic | 45.0% | |
GGCAATTCCACAGCTGAATT+TGG | + | chr2_4:3486648-3486667 | None:intergenic | 45.0% | |
CCACCGTCTGATATGAGATA+CGG | + | chr2_4:3486714-3486733 | None:intergenic | 45.0% | |
GTCGCTCTACATGAAATCGA+TGG | - | chr2_4:3486738-3486757 | Msa0309060:intron | 45.0% | |
GTTCGACTGCGACTATTTCA+GGG | + | chr2_4:3486863-3486882 | None:intergenic | 45.0% | |
TGAAATAGTCGCAGTCGAAC+CGG | - | chr2_4:3486863-3486882 | Msa0309060:intron | 45.0% | |
CCGGTTTCTTCATCAGTTAC+CGG | + | chr2_4:3486885-3486904 | None:intergenic | 45.0% | |
CCGGTAACTGATGAAGAAAC+CGG | - | chr2_4:3486882-3486901 | Msa0309060:intron | 45.0% | |
!! | AGGAGGCATTGCAATCATAC+TGG | - | chr2_4:3487608-3487627 | Msa0309060:CDS | 45.0% |
!! | GGAGGCATTGCAATCATACT+GGG | - | chr2_4:3487609-3487628 | Msa0309060:CDS | 45.0% |
!! | ATGGGTTAGAGTGACAAAGG+AGG | - | chr2_4:3487680-3487699 | Msa0309060:CDS | 45.0% |
AGAAAAACAGGAACACCTCC+AGG | + | chr2_4:3487898-3487917 | None:intergenic | 45.0% | |
!! | GTGACTGTTTCAGGTTCTAG+AGG | - | chr2_4:3488835-3488854 | Msa0309060:intron | 45.0% |
AATTAAGGCCGTACCTGGTA+GGG | - | chr2_4:3488858-3488877 | Msa0309060:intron | 45.0% | |
AGCTGGTGGAACTCTTGAAT+TGG | - | chr2_4:3488883-3488902 | Msa0309060:intron | 45.0% | |
AGAAACGGAACTTTGGTGGG+TGG | - | chr2_4:3484776-3484795 | Msa0309060:three_prime_UTR | 50.0% | |
! | GAAACGGAACTTTGGTGGGT+GGG | - | chr2_4:3484777-3484796 | Msa0309060:three_prime_UTR | 50.0% |
TGCGATTGGCGATGGTGTTT+GGG | - | chr2_4:3484805-3484824 | Msa0309060:three_prime_UTR | 50.0% | |
GAAAATCAGCACCCGATGCA+AGG | - | chr2_4:3484970-3484989 | Msa0309060:intron | 50.0% | |
!! | TCTTTGTTGTTGCAGGGCAC+TGG | - | chr2_4:3485141-3485160 | Msa0309060:three_prime_UTR | 50.0% |
TGAAAGGAAAGGGAAGGACG+CGG | + | chr2_4:3485210-3485229 | None:intergenic | 50.0% | |
GTCTCAAATGGGATTGGGCA+TGG | + | chr2_4:3485503-3485522 | None:intergenic | 50.0% | |
TCTTCTTACCACGGCGTCTA+CGG | + | chr2_4:3486198-3486217 | None:intergenic | 50.0% | |
CTTATCCCACTAAGTGGGGT+CGG | + | chr2_4:3486372-3486391 | None:intergenic | 50.0% | |
ACGCCTTATCCCACTAAGTG+GGG | + | chr2_4:3486376-3486395 | None:intergenic | 50.0% | |
CAACGCCTTATCCCACTAAG+TGG | + | chr2_4:3486378-3486397 | None:intergenic | 50.0% | |
! | GTGAATAAGCATGGCACTGG+AGG | - | chr2_4:3486481-3486500 | Msa0309060:intron | 50.0% |
CAGTTTCGGAAATTGGGAGC+TGG | - | chr2_4:3486565-3486584 | Msa0309060:intron | 50.0% | |
TGCCACTCCAAATTCAGCTG+TGG | - | chr2_4:3486638-3486657 | Msa0309060:intron | 50.0% | |
CGGCCGTATCTCATATCAGA+CGG | - | chr2_4:3486708-3486727 | Msa0309060:intron | 50.0% | |
CCGTATCTCATATCAGACGG+TGG | - | chr2_4:3486711-3486730 | Msa0309060:intron | 50.0% | |
! | TTGAAGTTACAGGGTGCCTG+TGG | - | chr2_4:3486774-3486793 | Msa0309060:intron | 50.0% |
! | TGAAGTTACAGGGTGCCTGT+GGG | - | chr2_4:3486775-3486794 | Msa0309060:intron | 50.0% |
!! | GGGCATTGAGCGTCGATTAA+TGG | - | chr2_4:3486830-3486849 | Msa0309060:intron | 50.0% |
GGTTCGACTGCGACTATTTC+AGG | + | chr2_4:3486864-3486883 | None:intergenic | 50.0% | |
AGCCTACCAGCTAGATTCAG+AGG | - | chr2_4:3487588-3487607 | Msa0309060:CDS | 50.0% | |
CTCCTCTGAATCTAGCTGGT+AGG | + | chr2_4:3487593-3487612 | None:intergenic | 50.0% | |
CTACCAGCTAGATTCAGAGG+AGG | - | chr2_4:3487591-3487610 | Msa0309060:CDS | 50.0% | |
ATGCCTCCTCTGAATCTAGC+TGG | + | chr2_4:3487597-3487616 | None:intergenic | 50.0% | |
GATGCTTTGTCCGTGTACGT+TGG | - | chr2_4:3488591-3488610 | Msa0309060:intron | 50.0% | |
AGAGGAATTAAGGCCGTACC+TGG | - | chr2_4:3488853-3488872 | Msa0309060:intron | 50.0% | |
GAATTAAGGCCGTACCTGGT+AGG | - | chr2_4:3488857-3488876 | Msa0309060:intron | 50.0% | |
ATTAAGGCCGTACCTGGTAG+GGG | - | chr2_4:3488859-3488878 | Msa0309060:intron | 50.0% | |
AACACGCACAGTCATGACAC+CGG | + | chr2_4:3488957-3488976 | None:intergenic | 50.0% | |
TAGCAGCTGAACTGCTGCTA+TGG | + | chr2_4:3489014-3489033 | None:intergenic | 50.0% | |
AGTACGGGGTTTAAAGGACG+AGG | - | chr2_4:3489585-3489604 | Msa0309060:intron | 50.0% | |
GTGCGATTGGCGATGGTGTT+TGG | - | chr2_4:3484804-3484823 | Msa0309060:three_prime_UTR | 55.0% | |
GATTGGCGATGGTGTTTGGG+TGG | - | chr2_4:3484808-3484827 | Msa0309060:three_prime_UTR | 55.0% | |
! | TGTTTGGGTGGTGACGTGAC+TGG | - | chr2_4:3484820-3484839 | Msa0309060:three_prime_UTR | 55.0% |
AGCACCACCACACCTTGCAT+CGG | + | chr2_4:3484985-3485004 | None:intergenic | 55.0% | |
CTTCTTACCACGGCGTCTAC+GGG | + | chr2_4:3486197-3486216 | None:intergenic | 55.0% | |
ACTAAGTGGGGTCGGCTACA+TGG | + | chr2_4:3486364-3486383 | None:intergenic | 55.0% | |
ATGTAGCCGACCCCACTTAG+TGG | - | chr2_4:3486363-3486382 | Msa0309060:intron | 55.0% | |
TGTAGCCGACCCCACTTAGT+GGG | - | chr2_4:3486364-3486383 | Msa0309060:intron | 55.0% | |
CGACCCCACTTAGTGGGATA+AGG | - | chr2_4:3486370-3486389 | Msa0309060:intron | 55.0% | |
TCACCAATCGAGGGTGAGTG+TGG | - | chr2_4:3488103-3488122 | Msa0309060:intron | 55.0% | |
ATGCCACACTCACCCTCGAT+TGG | + | chr2_4:3488109-3488128 | None:intergenic | 55.0% | |
AGCTGAACTGCTGCTATGGC+AGG | + | chr2_4:3489010-3489029 | None:intergenic | 55.0% | |
GCACTTGAGCTTAGGCAGAG+AGG | - | chr2_4:3489634-3489653 | Msa0309060:intron | 55.0% | |
! | ACGGAACTTTGGTGGGTGGG+TGG | - | chr2_4:3484780-3484799 | Msa0309060:three_prime_UTR | 60.0% |
TCAGCACCCGATGCAAGGTG+TGG | - | chr2_4:3484975-3484994 | Msa0309060:intron | 60.0% | |
GCACCACCACACCTTGCATC+GGG | + | chr2_4:3484984-3485003 | None:intergenic | 60.0% | |
AAAGGGAAGGACGCGGCAGA+AGG | + | chr2_4:3485203-3485222 | None:intergenic | 60.0% | |
AGAACTCGGACACGACCCAC+AGG | + | chr2_4:3486793-3486812 | None:intergenic | 60.0% | |
CGGCAGCTGGACCTGTGATT+CGG | + | chr2_4:3488937-3488956 | None:intergenic | 60.0% | |
CGAATCACAGGTCCAGCTGC+CGG | - | chr2_4:3488935-3488954 | Msa0309060:intron | 60.0% | |
ACAGTCATGACACCGGCAGC+TGG | + | chr2_4:3488950-3488969 | None:intergenic | 60.0% | |
GTGGGTGGGTGGTGTGCGAT+TGG | - | chr2_4:3484791-3484810 | Msa0309060:three_prime_UTR | 65.0% | |
GGGTGGTGTGCGATTGGCGA+TGG | - | chr2_4:3484797-3484816 | Msa0309060:three_prime_UTR | 65.0% | |
GCACCCGATGCAAGGTGTGG+TGG | - | chr2_4:3484978-3484997 | Msa0309060:intron | 65.0% | |
GAGAAGACCCGTAGACGCCG+TGG | - | chr2_4:3486187-3486206 | Msa0309060:intron | 65.0% | |
CCAGCTGCCCCTACCAGGTA+CGG | + | chr2_4:3488869-3488888 | None:intergenic | 65.0% | |
TACCTGGTAGGGGCAGCTGG+TGG | - | chr2_4:3488869-3488888 | Msa0309060:intron | 65.0% | |
TTCCACCAGCTGCCCCTACC+AGG | + | chr2_4:3488874-3488893 | None:intergenic | 65.0% | |
CCGTACCTGGTAGGGGCAGC+TGG | - | chr2_4:3488866-3488885 | Msa0309060:intron | 70.0% |
Chromosome | Type | Strat | End | Strand | Name |
---|---|---|---|---|---|
chr2_4 | gene | 3484767 | 3489724 | 3484767 | ID=Msa0309060;Name=Msa0309060 |
chr2_4 | mRNA | 3484767 | 3489724 | 3484767 | ID=Msa0309060-mRNA-1;Parent=Msa0309060;Name=Msa0309060-mRNA-1;_AED=0.10;_eAED=0.10;_QI=89|1|1|1|0.6|0.5|6|638|224 |
chr2_4 | exon | 3484767 | 3484980 | 3484767 | ID=Msa0309060-mRNA-1:exon:1118;Parent=Msa0309060-mRNA-1 |
chr2_4 | exon | 3485031 | 3485643 | 3485031 | ID=Msa0309060-mRNA-1:exon:1117;Parent=Msa0309060-mRNA-1 |
chr2_4 | exon | 3487556 | 3487866 | 3487556 | ID=Msa0309060-mRNA-1:exon:1116;Parent=Msa0309060-mRNA-1 |
chr2_4 | exon | 3489248 | 3489335 | 3489248 | ID=Msa0309060-mRNA-1:exon:1115;Parent=Msa0309060-mRNA-1 |
chr2_4 | exon | 3489420 | 3489520 | 3489420 | ID=Msa0309060-mRNA-1:exon:1114;Parent=Msa0309060-mRNA-1 |
chr2_4 | exon | 3489650 | 3489724 | 3489650 | ID=Msa0309060-mRNA-1:exon:1113;Parent=Msa0309060-mRNA-1 |
chr2_4 | five_prime_UTR | 3489650 | 3489724 | 3489650 | ID=Msa0309060-mRNA-1:five_prime_utr;Parent=Msa0309060-mRNA-1 |
chr2_4 | five_prime_UTR | 3489507 | 3489520 | 3489507 | ID=Msa0309060-mRNA-1:five_prime_utr;Parent=Msa0309060-mRNA-1 |
chr2_4 | CDS | 3489420 | 3489506 | 3489420 | ID=Msa0309060-mRNA-1:cds;Parent=Msa0309060-mRNA-1 |
chr2_4 | CDS | 3489248 | 3489335 | 3489248 | ID=Msa0309060-mRNA-1:cds;Parent=Msa0309060-mRNA-1 |
chr2_4 | CDS | 3487556 | 3487866 | 3487556 | ID=Msa0309060-mRNA-1:cds;Parent=Msa0309060-mRNA-1 |
chr2_4 | CDS | 3485455 | 3485643 | 3485455 | ID=Msa0309060-mRNA-1:cds;Parent=Msa0309060-mRNA-1 |
chr2_4 | three_prime_UTR | 3485031 | 3485454 | 3485031 | ID=Msa0309060-mRNA-1:three_prime_utr;Parent=Msa0309060-mRNA-1 |
chr2_4 | three_prime_UTR | 3484767 | 3484980 | 3484767 | ID=Msa0309060-mRNA-1:three_prime_utr;Parent=Msa0309060-mRNA-1 |
Gene Sequence |
Protein sequence |