AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa1144990


Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa1144990 MtrunA17_Chr8g0392961 97.200 250 6 1 1 250 1 249 0.0 497
Msa1144990 MtrunA17_Chr6g0482741 69.748 238 71 1 9 246 4 240 9.78e-131 369
Msa1144990 MtrunA17_Chr8g0351851 59.091 220 88 2 27 245 19 237 1.03e-91 270
Msa1144990 MtrunA17_Chr3g0141341 54.185 227 99 3 23 246 7 231 8.04e-88 260
Msa1144990 MtrunA17_Chr8g0371781 53.879 232 99 3 27 250 27 258 4.66e-84 253
Msa1144990 MtrunA17_Chr4g0037331 51.639 244 102 5 4 245 10 239 4.43e-82 249
Msa1144990 MtrunA17_Chr1g0156711 52.893 242 109 4 9 245 4 245 7.55e-82 248
Msa1144990 MtrunA17_Chr7g0239131 50.424 236 111 3 14 246 10 242 1.23e-81 244
Msa1144990 MtrunA17_Chr1g0154591 54.148 229 98 3 23 247 8 233 1.84e-81 244
Msa1144990 MtrunA17_Chr3g0112091 50.211 237 112 3 14 246 3 237 1.37e-80 242
Msa1144990 MtrunA17_Chr8g0371771 53.975 239 98 6 10 245 14 243 6.69e-80 242
Msa1144990 MtrunA17_Chr5g0405611 54.222 225 93 4 24 246 92 308 3.03e-79 243
Msa1144990 MtrunA17_Chr8g0352471 49.402 251 118 5 1 246 1 247 4.32e-78 238
Msa1144990 MtrunA17_Chr5g0424221 53.097 226 99 4 25 250 26 244 2.42e-77 235
Msa1144990 MtrunA17_Chr5g0405581 50.198 253 117 6 1 246 1 251 2.21e-76 233
Msa1144990 MtrunA17_Chr7g0265011 52.679 224 100 5 28 247 67 288 3.52e-76 232
Msa1144990 MtrunA17_Chr3g0142781 48.374 246 122 4 10 250 8 253 1.26e-74 229
Msa1144990 MtrunA17_Chr5g0428801 47.222 252 121 4 5 250 9 254 1.44e-74 229
Msa1144990 MtrunA17_Chr8g0357311 48.374 246 117 5 6 246 7 247 9.47e-73 223
Msa1144990 MtrunA17_Chr1g0180121 47.325 243 122 5 8 246 2 242 1.04e-72 222
Msa1144990 MtrunA17_Chr6g0452331 44.664 253 132 6 1 247 3 253 1.43e-72 223
Msa1144990 MtrunA17_Chr2g0312181 50.885 226 106 4 25 246 19 243 5.39e-71 218
Msa1144990 MtrunA17_Chr1g0179891 49.565 230 110 5 21 246 10 237 2.71e-70 216
Msa1144990 MtrunA17_Chr1g0180231 47.280 239 120 5 12 246 6 242 1.38e-69 214
Msa1144990 MtrunA17_Chr1g0179871 47.280 239 120 5 12 246 6 242 1.38e-69 214
Msa1144990 MtrunA17_Chr4g0037351 49.794 243 115 6 9 246 8 248 3.27e-69 216
Msa1144990 MtrunA17_Chr1g0179851 48.936 235 111 6 16 246 10 239 3.98e-69 213
Msa1144990 MtrunA17_Chr1g0180221 48.889 225 109 5 28 248 62 284 1.26e-68 213
Msa1144990 MtrunA17_Chr1g0180161 45.122 246 129 5 8 249 2 245 8.26e-68 210
Msa1144990 MtrunA17_Chr2g0311551 47.826 230 111 6 22 246 19 244 4.72e-67 223
Msa1144990 MtrunA17_Chr2g0311521 46.939 245 118 6 9 246 8 247 9.99e-65 217
Msa1144990 MtrunA17_Chr4g0031221 44.958 238 120 6 14 245 19 251 6.41e-63 197
Msa1144990 MtrunA17_Chr2g0311561 44.872 234 120 6 24 250 5 236 2.62e-61 194
Msa1144990 MtrunA17_Chr5g0397821 41.333 225 109 7 25 246 21 225 1.63e-49 162
Msa1144990 MtrunA17_Chr5g0397831 38.340 253 128 8 4 246 2 236 4.42e-48 159
Msa1144990 MtrunA17_Chr2g0311501 45.902 183 89 7 71 246 3 182 2.40e-47 155
Msa1144990 MtrunA17_Chr8g0386341 36.948 249 125 11 3 246 27 248 5.47e-45 151
Msa1144990 MtrunA17_Chr2g0311531 37.500 224 109 9 27 246 26 222 8.79e-40 138
Msa1144990 MtrunA17_Chr5g0406771 39.130 184 95 6 10 186 3 176 3.92e-36 126
Msa1144990 MtrunA17_Chr2g0309611 31.452 248 158 7 1 244 10 249 4.57e-36 128
Msa1144990 MtrunA17_Chr1g0179911 30.435 253 154 7 1 246 1 238 8.53e-30 112
Msa1144990 MtrunA17_Chr8g0386351 39.860 143 71 5 4 143 44 174 2.84e-27 104
Msa1144990 MtrunA17_Chr1g0180181 47.368 95 47 3 157 249 9 102 4.66e-20 82.8
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa1144990 AT1G18250.2 78.319 226 49 0 25 250 19 244 4.54e-135 380
Msa1144990 AT1G18250.1 77.434 226 51 0 25 250 18 243 3.55e-134 378
Msa1144990 AT1G73620.1 74.336 226 58 0 25 250 39 264 9.61e-130 368
Msa1144990 AT1G75050.1 55.462 238 102 3 14 249 11 246 3.35e-88 261
Msa1144990 AT1G75030.1 56.087 230 95 4 24 249 19 246 4.08e-85 254
Msa1144990 AT1G75040.1 56.250 240 94 6 9 246 9 239 1.41e-83 249
Msa1144990 AT1G19320.1 53.175 252 105 5 1 245 1 246 4.39e-82 246
Msa1144990 AT4G38660.2 51.304 230 105 3 21 248 1 225 1.53e-80 245
Msa1144990 AT4G38660.1 49.597 248 114 4 3 248 9 247 2.47e-80 245
Msa1144990 AT1G77700.2 53.712 229 98 5 23 250 55 276 1.18e-79 242
Msa1144990 AT1G77700.3 54.911 224 93 5 23 245 55 271 2.63e-79 242
Msa1144990 AT1G77700.1 53.680 231 99 5 16 245 76 299 2.91e-79 243
Msa1144990 AT1G75800.1 53.333 240 105 5 14 246 9 248 4.46e-78 239
Msa1144990 AT1G20030.1 54.667 225 95 5 29 246 4 228 1.54e-76 234
Msa1144990 AT1G20030.2 54.667 225 95 5 29 246 21 245 2.27e-76 234
Msa1144990 AT4G24180.6 48.047 256 112 6 5 250 16 260 1.36e-74 228
Msa1144990 AT5G02140.1 47.280 239 120 4 12 246 5 241 3.45e-74 228
Msa1144990 AT4G24180.5 50.000 236 103 5 25 250 25 255 5.01e-74 226
Msa1144990 AT5G02140.2 47.280 239 120 4 12 246 5 241 5.11e-74 226
Msa1144990 AT4G24180.1 48.413 252 109 6 5 246 16 256 5.44e-74 228
Msa1144990 AT4G24180.2 50.431 232 100 5 25 246 25 251 2.16e-73 226
Msa1144990 AT2G17860.1 47.755 245 120 5 14 250 9 253 2.83e-73 224
Msa1144990 AT5G40020.1 45.968 248 124 4 6 248 8 250 5.19e-73 223
Msa1144990 AT5G24620.1 46.332 259 119 5 1 250 9 256 5.48e-72 226
Msa1144990 AT4G36010.1 51.082 231 102 5 26 246 21 250 7.27e-72 222
Msa1144990 AT4G36010.2 51.082 231 102 5 26 246 21 250 7.27e-72 222
Msa1144990 AT5G24620.4 46.332 259 119 5 1 250 64 311 1.33e-71 227
Msa1144990 AT5G24620.3 46.332 259 119 5 1 250 85 332 1.95e-71 227
Msa1144990 AT4G38670.3 48.387 248 115 6 5 246 7 247 7.34e-69 214
Msa1144990 AT4G38670.1 48.387 248 115 6 5 246 7 247 7.34e-69 214
Msa1144990 AT4G38670.2 51.339 224 103 5 29 246 8 231 1.21e-67 210
Msa1144990 AT4G24180.3 46.835 237 105 6 5 231 16 241 2.89e-65 206
Msa1144990 AT4G24180.4 48.848 217 96 5 25 231 25 236 1.16e-64 204
Msa1144990 AT2G28790.2 44.538 238 123 6 14 245 39 273 1.19e-64 202
Msa1144990 AT2G28790.1 44.538 238 123 6 14 245 14 248 1.81e-64 201
Msa1144990 AT5G38280.1 43.750 240 128 6 14 246 11 250 7.03e-59 197
Msa1144990 AT5G38280.2 43.750 240 128 6 14 246 11 250 9.95e-59 197
Msa1144990 AT4G11650.1 40.239 251 123 7 1 249 1 226 1.90e-56 181
Msa1144990 AT4G36000.2 58.503 147 51 3 103 247 1 139 1.78e-54 174
Msa1144990 AT4G36000.1 58.503 147 51 3 103 247 1 139 1.78e-54 174
Msa1144990 AT4G18253.1 38.655 238 138 4 14 249 10 241 8.10e-51 166
Msa1144990 AT1G70250.1 38.326 227 126 8 29 246 146 367 1.23e-41 151
Msa1144990 AT4G18250.1 38.182 220 127 6 30 246 59 272 2.89e-38 141
Msa1144990 AT5G24620.2 52.800 125 53 3 132 250 15 139 2.92e-35 128
Msa1144990 AT2G24810.1 58.442 77 32 0 169 245 116 192 1.55e-24 97.1

Find 117 sgRNAs with CRISPR-Local

Find 261 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
CACAATGGTCAGGCCGTTTC+TGG 0.068116 7_4:-21502764 Msa1144990:CDS
CCGGCACCGGGTTGGATTGC+TGG 0.183097 7_4:+21502855 None:intergenic
AGCAACTCTTATTATTATTA+TGG 0.205585 7_4:-21502102 Msa1144990:three_prime_UTR
AATATGAAATGGGGTTTCTT+TGG 0.253265 7_4:+21503213 None:intergenic
ATTGAAGTAAAGAGACTTCT+AGG 0.255474 7_4:+21502132 None:intergenic
CGACAAAAGGTAAAAGTTAA+AGG 0.276383 7_4:+21503190 None:intergenic
ATGGTTGGTTAAGTTTAATT+TGG 0.293012 7_4:-21502083 Msa1144990:three_prime_UTR
TGAATAAGCAGTGGGCTTGC+AGG 0.307584 7_4:+21502368 None:intergenic
GACCTCACCTGCAACCCTAC+TGG 0.350758 7_4:+21502486 None:intergenic
CATAAATATAAAGATGATAA+TGG 0.359531 7_4:+21502191 None:intergenic
ATTACACCTTTCAAGGGATC+TGG 0.363950 7_4:-21502555 Msa1144990:CDS
AAGCAGCCATGGTGTGATAT+TGG 0.364556 7_4:+21503123 None:intergenic
AAAGTTAAAGGAATATGAAA+TGG 0.366425 7_4:+21503202 None:intergenic
CGGTGCCGGAAAACCCATTC+TGG 0.376903 7_4:-21502841 Msa1144990:CDS
CTGACCATTGTGGTGGGACT+TGG 0.379600 7_4:+21502775 None:intergenic
GATTTCCATTACACCTTTCA+AGG 0.380242 7_4:-21502562 Msa1144990:CDS
GAAGCCGCCGCGGGCCAGAA+TGG 0.391505 7_4:+21502827 None:intergenic
ACAATGGTCAGGCCGTTTCT+GGG 0.391880 7_4:-21502763 Msa1144990:CDS
ATTGCTGGCCACACTGGGTG+GGG 0.395326 7_4:+21502870 None:intergenic
TGGAGGGAATAAGCTTTGTT+TGG 0.398076 7_4:+21502795 None:intergenic
TAAGCATAAGAGTAAGCCTT+TGG 0.402209 7_4:+21502324 None:intergenic
GGTTGGATTGCTGGCCACAC+TGG 0.402359 7_4:+21502864 None:intergenic
GGGAATAAGCTTTGTTTGGT+GGG 0.404140 7_4:+21502799 None:intergenic
AAGTTAAAGGAATATGAAAT+GGG 0.408932 7_4:+21503203 None:intergenic
ACACTCGCTGAGTTCACATT+TGG 0.414011 7_4:-21502636 Msa1144990:CDS
AAGCCGCCGCGGGCCAGAAT+GGG 0.420312 7_4:+21502828 None:intergenic
GATGTGCCCAGTAGGGTTGC+AGG 0.421685 7_4:-21502493 Msa1144990:CDS
CGCAGTCTCCGGTGGCGCAA+TGG 0.424632 7_4:+21502703 None:intergenic
TTGAAAGGTGTAATGGAAAT+CGG 0.429153 7_4:+21502564 None:intergenic
CAGTGGGCTTGCAGGTCTGT+GGG 0.433412 7_4:+21502376 None:intergenic
ATTGGTGCAAGTAGCAATAC+TGG 0.439699 7_4:+21502290 None:intergenic
ACCTCACCTGCAACCCTACT+GGG 0.443228 7_4:+21502487 None:intergenic
GGCCACGGCCATTGCGCCAC+CGG 0.444546 7_4:-21502711 Msa1144990:CDS
GGATTGCTGGCCACACTGGG+TGG 0.446029 7_4:+21502868 None:intergenic
CTCCGGTGGCGCAATGGCCG+TGG 0.450871 7_4:+21502709 None:intergenic
AGCAGCCATGGTGTGATATT+GGG 0.456122 7_4:+21503124 None:intergenic
GTTGGATTGCTGGCCACACT+GGG 0.457650 7_4:+21502865 None:intergenic
ACCATTGTGGTGGGACTTGG+AGG 0.458699 7_4:+21502778 None:intergenic
GATTTGTAGTAGATTCTCAT+TGG 0.461431 7_4:-21502036 Msa1144990:three_prime_UTR
TACTACAAATCTAGTCGAAT+GGG 0.463227 7_4:+21502048 None:intergenic
ACTCTTATTATTATTATGGT+TGG 0.463718 7_4:-21502098 Msa1144990:three_prime_UTR
GATTGCTGGCCACACTGGGT+GGG 0.464130 7_4:+21502869 None:intergenic
TACCTGGAGGGTATGCGATT+AGG 0.464838 7_4:+21503069 None:intergenic
GCAGTGGGCTTGCAGGTCTG+TGG 0.469723 7_4:+21502375 None:intergenic
GGCTGCACCTTCGACGCATC+AGG 0.474004 7_4:-21502732 Msa1144990:CDS
ATTTATGTCATCTCATCTCA+TGG 0.478066 7_4:-21502175 Msa1144990:three_prime_UTR
GAAGAAGAGAGCGGTGAAGA+TGG 0.478141 7_4:+21503100 None:intergenic
AGATCCCTTGAAAGGTGTAA+TGG 0.479072 7_4:+21502557 None:intergenic
GAGAGATCCGCCGCAGTCTC+CGG 0.481610 7_4:+21502692 None:intergenic
AAGCATAAGAGTAAGCCTTT+GGG 0.484229 7_4:+21502325 None:intergenic
CAAGTCCCACCACAATGGTC+AGG 0.493666 7_4:-21502774 Msa1144990:CDS
AGGGAATAAGCTTTGTTTGG+TGG 0.495351 7_4:+21502798 None:intergenic
GGCCGTTTCTGGGGCCGTCA+CGG 0.495582 7_4:-21502753 Msa1144990:CDS
AGCCGTGACGGCCCCAGAAA+CGG 0.498382 7_4:+21502751 None:intergenic
TATTGCTGCACTGGTAACTT+TGG 0.498988 7_4:-21502402 Msa1144990:CDS
CCAGCAATCCAACCCGGTGC+CGG 0.501469 7_4:-21502855 Msa1144990:CDS
GTGCTGCTTTCAACTCTCCT+AGG 0.501482 7_4:-21502425 Msa1144990:CDS
TCTCTCTTCTGCAACGGCAT+AGG 0.508531 7_4:-21502675 Msa1144990:CDS
TTCCTAATCGCATACCCTCC+AGG 0.509059 7_4:-21503071 Msa1144990:intron
TCTCCTAGGTATTGCTGCAC+TGG 0.513261 7_4:-21502411 Msa1144990:CDS
GCCCAGTAGGGTTGCAGGTG+AGG 0.513868 7_4:-21502488 Msa1144990:CDS
TCTGGAAAATGTAGCTATGC+TGG 0.515580 7_4:-21502537 Msa1144990:CDS
GTGAACTCAGCGAGTGTGGC+TGG 0.529115 7_4:+21502642 None:intergenic
CTCTTCTGCAACGGCATAGG+CGG 0.529119 7_4:-21502672 Msa1144990:CDS
ACTCAGCGAGTGTGGCTGGT+GGG 0.531396 7_4:+21502646 None:intergenic
CTACTACAAATCTAGTCGAA+TGG 0.533775 7_4:+21502047 None:intergenic
AGTGATCATGTAACTAGCAT+TGG 0.535613 7_4:+21502272 None:intergenic
CTCAGCGAGTGTGGCTGGTG+GGG 0.539267 7_4:+21502647 None:intergenic
CTTAACTTGATGTGCCCAGT+AGG 0.539656 7_4:-21502501 Msa1144990:CDS
TGGGAGGTTGAAGCCGCCGC+GGG 0.541485 7_4:+21502818 None:intergenic
AGTCTACATAACCACAAAAG+AGG 0.544714 7_4:-21503154 Msa1144990:five_prime_UTR
GTGCAAGTAGCAATACTGGT+AGG 0.548800 7_4:+21502294 None:intergenic
AAGATTCTTGAATAAGCAGT+GGG 0.550542 7_4:+21502360 None:intergenic
CGTCGAAGGTGCAGCCGTGA+CGG 0.550989 7_4:+21502739 None:intergenic
GTAAGTTGTAACCGTCGACC+AGG 0.554402 7_4:+21502586 None:intergenic
CCATGGTGTGATATTGGGAA+TGG 0.563552 7_4:+21503129 None:intergenic
AACTCAGCGAGTGTGGCTGG+TGG 0.563622 7_4:+21502645 None:intergenic
AGATTTCTATGACGTCAGCC+TGG 0.567905 7_4:-21502604 Msa1144990:CDS
CAATGGTCAGGCCGTTTCTG+GGG 0.570580 7_4:-21502762 Msa1144990:CDS
CTTCAAAACTGCTTGCCCAA+AGG 0.572482 7_4:-21502340 Msa1144990:CDS
GGTGAAGATGGAAGCAGCCA+TGG 0.573489 7_4:+21503112 None:intergenic
GAAGATTCTTGAATAAGCAG+TGG 0.575322 7_4:+21502359 None:intergenic
CATTGCGCCACCGGAGACTG+CGG 0.577164 7_4:-21502702 Msa1144990:CDS
GTGTGGCCAGCAATCCAACC+CGG 0.580526 7_4:-21502861 Msa1144990:CDS
ATGATCAACGGCGGTGACGA+GGG 0.581144 7_4:+21502244 None:intergenic
GCCGTGGCCTGATGCGTCGA+AGG 0.582247 7_4:+21502725 None:intergenic
TTAACTTGATGTGCCCAGTA+GGG 0.582603 7_4:-21502500 Msa1144990:CDS
AATAAGCTTTGTTTGGTGGG+AGG 0.584207 7_4:+21502802 None:intergenic
ACCTTCGACGCATCAGGCCA+CGG 0.592438 7_4:-21502726 Msa1144990:CDS
ATTTCCATTACACCTTTCAA+GGG 0.595357 7_4:-21502561 Msa1144990:CDS
GTGGGAGGTTGAAGCCGCCG+CGG 0.600609 7_4:+21502817 None:intergenic
TATGACGTCAGCCTGGTCGA+CGG 0.603237 7_4:-21502597 Msa1144990:CDS
GATGATCAACGGCGGTGACG+AGG 0.606071 7_4:+21502243 None:intergenic
GGCGGATCTCTCTTCTGCAA+CGG 0.609526 7_4:-21502681 Msa1144990:CDS
TGCAAGTAGCAATACTGGTA+GGG 0.611972 7_4:+21502295 None:intergenic
AAACGGCCTGACCATTGTGG+TGG 0.613091 7_4:+21502768 None:intergenic
TGCGCCACCGGAGACTGCGG+CGG 0.616529 7_4:-21502699 Msa1144990:CDS
AGTGGGCTTGCAGGTCTGTG+GGG 0.617801 7_4:+21502377 None:intergenic
TTACCAGTGCAGCAATACCT+AGG 0.621497 7_4:+21502408 None:intergenic
AGATCCGCCGCAGTCTCCGG+TGG 0.621709 7_4:+21502695 None:intergenic
CGTGACAAGAAGCAAGTGGT+GGG 0.622854 7_4:-21502462 Msa1144990:CDS
CAGAAACGGCCTGACCATTG+TGG 0.626293 7_4:+21502765 None:intergenic
AACGGCCTGACCATTGTGGT+GGG 0.629227 7_4:+21502769 None:intergenic
AGTTAAAGGAATATGAAATG+GGG 0.632598 7_4:+21503204 None:intergenic
CCATTGTGGTGGGACTTGGA+GGG 0.634133 7_4:+21502779 None:intergenic
TAATGAAGATAGATGATCAA+CGG 0.634704 7_4:+21502232 None:intergenic
ACGTGACAAGAAGCAAGTGG+TGG 0.639156 7_4:-21502463 Msa1144990:CDS
GGAAAACCCATTCTGGCCCG+CGG 0.640848 7_4:-21502834 Msa1144990:CDS
AAATGTGAACTCAGCGAGTG+TGG 0.640994 7_4:+21502638 None:intergenic
CCCTCCAAGTCCCACCACAA+TGG 0.642784 7_4:-21502779 Msa1144990:CDS
AAACCCATTCTGGCCCGCGG+CGG 0.643152 7_4:-21502831 Msa1144990:CDS
GAAAGCAGCGAAGAAGAGAG+CGG 0.656778 7_4:+21503091 None:intergenic
ATAATAATAAAATACCTGGA+GGG 0.657796 7_4:+21503057 None:intergenic
ACAAGTGTCCCCACCCAGTG+TGG 0.666782 7_4:-21502878 Msa1144990:CDS
GTCACGTGACAAGAAGCAAG+TGG 0.679782 7_4:-21502466 Msa1144990:CDS
CCATTCCCAATATCACACCA+TGG 0.722602 7_4:-21503129 Msa1144990:exon
TGAAGATAGATGATCAACGG+CGG 0.740375 7_4:+21502235 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! AATAATAATAATAAAATACC+TGG + chr7_4:21502193-21502212 None:intergenic 10.0%
!! AATAATAATAATAAAATACC+TGG + chr7_4:21502193-21502212 None:intergenic 10.0%
!! CATAAATATAAAGATGATAA+TGG + chr7_4:21503055-21503074 None:intergenic 15.0%
!! CATAAATATAAAGATGATAA+TGG + chr7_4:21503055-21503074 None:intergenic 15.0%
!! AAGTTAAAGGAATATGAAAT+GGG + chr7_4:21502043-21502062 None:intergenic 20.0%
!! AAAGTTAAAGGAATATGAAA+TGG + chr7_4:21502044-21502063 None:intergenic 20.0%
!! ATAATAATAAAATACCTGGA+GGG + chr7_4:21502189-21502208 None:intergenic 20.0%
!! AATAATAATAAAATACCTGG+AGG + chr7_4:21502190-21502209 None:intergenic 20.0%
!! AGCAACTCTTATTATTATTA+TGG - chr7_4:21503141-21503160 Msa1144990:five_prime_UTR 20.0%
!! ACTCTTATTATTATTATGGT+TGG - chr7_4:21503145-21503164 Msa1144990:five_prime_UTR 20.0%
!! AAGTTAAAGGAATATGAAAT+GGG + chr7_4:21502043-21502062 None:intergenic 20.0%
!! AAAGTTAAAGGAATATGAAA+TGG + chr7_4:21502044-21502063 None:intergenic 20.0%
!! ATAATAATAAAATACCTGGA+GGG + chr7_4:21502189-21502208 None:intergenic 20.0%
!! AATAATAATAAAATACCTGG+AGG + chr7_4:21502190-21502209 None:intergenic 20.0%
!! AGCAACTCTTATTATTATTA+TGG - chr7_4:21503141-21503160 Msa1144990:five_prime_UTR 20.0%
!! ACTCTTATTATTATTATGGT+TGG - chr7_4:21503145-21503164 Msa1144990:five_prime_UTR 20.0%
! AGTTAAAGGAATATGAAATG+GGG + chr7_4:21502042-21502061 None:intergenic 25.0%
! AGAAACGACAAATTAAGTAA+CGG + chr7_4:21502286-21502305 None:intergenic 25.0%
! TAATGAAGATAGATGATCAA+CGG + chr7_4:21503014-21503033 None:intergenic 25.0%
!! ATGGTTGGTTAAGTTTAATT+TGG - chr7_4:21503160-21503179 Msa1144990:five_prime_UTR 25.0%
! ATATTAAAATGCATCACACA+AGG - chr7_4:21503243-21503262 Msa1144990:five_prime_UTR 25.0%
! AGTTAAAGGAATATGAAATG+GGG + chr7_4:21502042-21502061 None:intergenic 25.0%
! AGAAACGACAAATTAAGTAA+CGG + chr7_4:21502286-21502305 None:intergenic 25.0%
! TAATGAAGATAGATGATCAA+CGG + chr7_4:21503014-21503033 None:intergenic 25.0%
!! ATGGTTGGTTAAGTTTAATT+TGG - chr7_4:21503160-21503179 Msa1144990:five_prime_UTR 25.0%
AATATGAAATGGGGTTTCTT+TGG + chr7_4:21502033-21502052 None:intergenic 30.0%
CGACAAAAGGTAAAAGTTAA+AGG + chr7_4:21502056-21502075 None:intergenic 30.0%
! GTATTTTGTATGACGACAAA+AGG + chr7_4:21502069-21502088 None:intergenic 30.0%
! TTGAAAGGTGTAATGGAAAT+CGG + chr7_4:21502682-21502701 None:intergenic 30.0%
ATTTCCATTACACCTTTCAA+GGG - chr7_4:21502682-21502701 Msa1144990:CDS 30.0%
AAGATTCTTGAATAAGCAGT+GGG + chr7_4:21502886-21502905 None:intergenic 30.0%
ATTTATGTCATCTCATCTCA+TGG - chr7_4:21503068-21503087 Msa1144990:intron 30.0%
ATTGAAGTAAAGAGACTTCT+AGG + chr7_4:21503114-21503133 None:intergenic 30.0%
TACTACAAATCTAGTCGAAT+GGG + chr7_4:21503198-21503217 None:intergenic 30.0%
GATTTGTAGTAGATTCTCAT+TGG - chr7_4:21503207-21503226 Msa1144990:five_prime_UTR 30.0%
AATATGAAATGGGGTTTCTT+TGG + chr7_4:21502033-21502052 None:intergenic 30.0%
CGACAAAAGGTAAAAGTTAA+AGG + chr7_4:21502056-21502075 None:intergenic 30.0%
! GTATTTTGTATGACGACAAA+AGG + chr7_4:21502069-21502088 None:intergenic 30.0%
! TTGAAAGGTGTAATGGAAAT+CGG + chr7_4:21502682-21502701 None:intergenic 30.0%
ATTTCCATTACACCTTTCAA+GGG - chr7_4:21502682-21502701 Msa1144990:CDS 30.0%
AAGATTCTTGAATAAGCAGT+GGG + chr7_4:21502886-21502905 None:intergenic 30.0%
ATTTATGTCATCTCATCTCA+TGG - chr7_4:21503068-21503087 Msa1144990:intron 30.0%
ATTGAAGTAAAGAGACTTCT+AGG + chr7_4:21503114-21503133 None:intergenic 30.0%
TACTACAAATCTAGTCGAAT+GGG + chr7_4:21503198-21503217 None:intergenic 30.0%
GATTTGTAGTAGATTCTCAT+TGG - chr7_4:21503207-21503226 Msa1144990:five_prime_UTR 30.0%
AGTCTACATAACCACAAAAG+AGG - chr7_4:21502089-21502108 Msa1144990:three_prime_UTR 35.0%
GATTTCCATTACACCTTTCA+AGG - chr7_4:21502681-21502700 Msa1144990:CDS 35.0%
GAAGATTCTTGAATAAGCAG+TGG + chr7_4:21502887-21502906 None:intergenic 35.0%
AAGCATAAGAGTAAGCCTTT+GGG + chr7_4:21502921-21502940 None:intergenic 35.0%
TAAGCATAAGAGTAAGCCTT+TGG + chr7_4:21502922-21502941 None:intergenic 35.0%
AGTGATCATGTAACTAGCAT+TGG + chr7_4:21502974-21502993 None:intergenic 35.0%
CTACTACAAATCTAGTCGAA+TGG + chr7_4:21503199-21503218 None:intergenic 35.0%
AGTCTACATAACCACAAAAG+AGG - chr7_4:21502089-21502108 Msa1144990:three_prime_UTR 35.0%
GATTTCCATTACACCTTTCA+AGG - chr7_4:21502681-21502700 Msa1144990:CDS 35.0%
GAAGATTCTTGAATAAGCAG+TGG + chr7_4:21502887-21502906 None:intergenic 35.0%
AAGCATAAGAGTAAGCCTTT+GGG + chr7_4:21502921-21502940 None:intergenic 35.0%
TAAGCATAAGAGTAAGCCTT+TGG + chr7_4:21502922-21502941 None:intergenic 35.0%
AGTGATCATGTAACTAGCAT+TGG + chr7_4:21502974-21502993 None:intergenic 35.0%
CTACTACAAATCTAGTCGAA+TGG + chr7_4:21503199-21503218 None:intergenic 35.0%
!! AATAAGCTTTGTTTGGTGGG+AGG + chr7_4:21502444-21502463 None:intergenic 40.0%
!! GGGAATAAGCTTTGTTTGGT+GGG + chr7_4:21502447-21502466 None:intergenic 40.0%
!! AGGGAATAAGCTTTGTTTGG+TGG + chr7_4:21502448-21502467 None:intergenic 40.0%
!! TGGAGGGAATAAGCTTTGTT+TGG + chr7_4:21502451-21502470 None:intergenic 40.0%
! AGATCCCTTGAAAGGTGTAA+TGG + chr7_4:21502689-21502708 None:intergenic 40.0%
ATTACACCTTTCAAGGGATC+TGG - chr7_4:21502688-21502707 Msa1144990:CDS 40.0%
! CATTTTCCAGATCCCTTGAA+AGG + chr7_4:21502697-21502716 None:intergenic 40.0%
TCTGGAAAATGTAGCTATGC+TGG - chr7_4:21502706-21502725 Msa1144990:CDS 40.0%
! TTAACTTGATGTGCCCAGTA+GGG - chr7_4:21502743-21502762 Msa1144990:CDS 40.0%
! TATTGCTGCACTGGTAACTT+TGG - chr7_4:21502841-21502860 Msa1144990:CDS 40.0%
TGCAAGTAGCAATACTGGTA+GGG + chr7_4:21502951-21502970 None:intergenic 40.0%
ATTGGTGCAAGTAGCAATAC+TGG + chr7_4:21502956-21502975 None:intergenic 40.0%
TGAAGATAGATGATCAACGG+CGG + chr7_4:21503011-21503030 None:intergenic 40.0%
!! AATAAGCTTTGTTTGGTGGG+AGG + chr7_4:21502444-21502463 None:intergenic 40.0%
!! GGGAATAAGCTTTGTTTGGT+GGG + chr7_4:21502447-21502466 None:intergenic 40.0%
!! AGGGAATAAGCTTTGTTTGG+TGG + chr7_4:21502448-21502467 None:intergenic 40.0%
!! TGGAGGGAATAAGCTTTGTT+TGG + chr7_4:21502451-21502470 None:intergenic 40.0%
! AGATCCCTTGAAAGGTGTAA+TGG + chr7_4:21502689-21502708 None:intergenic 40.0%
ATTACACCTTTCAAGGGATC+TGG - chr7_4:21502688-21502707 Msa1144990:CDS 40.0%
! CATTTTCCAGATCCCTTGAA+AGG + chr7_4:21502697-21502716 None:intergenic 40.0%
TCTGGAAAATGTAGCTATGC+TGG - chr7_4:21502706-21502725 Msa1144990:CDS 40.0%
! TTAACTTGATGTGCCCAGTA+GGG - chr7_4:21502743-21502762 Msa1144990:CDS 40.0%
! TATTGCTGCACTGGTAACTT+TGG - chr7_4:21502841-21502860 Msa1144990:CDS 40.0%
TGCAAGTAGCAATACTGGTA+GGG + chr7_4:21502951-21502970 None:intergenic 40.0%
ATTGGTGCAAGTAGCAATAC+TGG + chr7_4:21502956-21502975 None:intergenic 40.0%
TGAAGATAGATGATCAACGG+CGG + chr7_4:21503011-21503030 None:intergenic 40.0%
! TGGGAATGGAACCTCTTTTG+TGG + chr7_4:21502103-21502122 None:intergenic 45.0%
CCATGGTGTGATATTGGGAA+TGG + chr7_4:21502117-21502136 None:intergenic 45.0%
CCATTCCCAATATCACACCA+TGG - chr7_4:21502114-21502133 Msa1144990:three_prime_UTR 45.0%
AGCAGCCATGGTGTGATATT+GGG + chr7_4:21502122-21502141 None:intergenic 45.0%
AAGCAGCCATGGTGTGATAT+TGG + chr7_4:21502123-21502142 None:intergenic 45.0%
TGTGTGTGAGAGAGAAGAGA+AGG + chr7_4:21502220-21502239 None:intergenic 45.0%
TCTCACACACACACAGAAAG+CGG - chr7_4:21502229-21502248 Msa1144990:exon 45.0%
AAATGTGAACTCAGCGAGTG+TGG + chr7_4:21502608-21502627 None:intergenic 45.0%
ACACTCGCTGAGTTCACATT+TGG - chr7_4:21502607-21502626 Msa1144990:CDS 45.0%
AGATTTCTATGACGTCAGCC+TGG - chr7_4:21502639-21502658 Msa1144990:CDS 45.0%
! CTTAACTTGATGTGCCCAGT+AGG - chr7_4:21502742-21502761 Msa1144990:CDS 45.0%
TTACCAGTGCAGCAATACCT+AGG + chr7_4:21502838-21502857 None:intergenic 45.0%
CTTCAAAACTGCTTGCCCAA+AGG - chr7_4:21502903-21502922 Msa1144990:CDS 45.0%
GTGCAAGTAGCAATACTGGT+AGG + chr7_4:21502952-21502971 None:intergenic 45.0%
! TGGGAATGGAACCTCTTTTG+TGG + chr7_4:21502103-21502122 None:intergenic 45.0%
CCATGGTGTGATATTGGGAA+TGG + chr7_4:21502117-21502136 None:intergenic 45.0%
CCATTCCCAATATCACACCA+TGG - chr7_4:21502114-21502133 Msa1144990:three_prime_UTR 45.0%
AGCAGCCATGGTGTGATATT+GGG + chr7_4:21502122-21502141 None:intergenic 45.0%
AAGCAGCCATGGTGTGATAT+TGG + chr7_4:21502123-21502142 None:intergenic 45.0%
TGTGTGTGAGAGAGAAGAGA+AGG + chr7_4:21502220-21502239 None:intergenic 45.0%
TCTCACACACACACAGAAAG+CGG - chr7_4:21502229-21502248 Msa1144990:exon 45.0%
AAATGTGAACTCAGCGAGTG+TGG + chr7_4:21502608-21502627 None:intergenic 45.0%
ACACTCGCTGAGTTCACATT+TGG - chr7_4:21502607-21502626 Msa1144990:CDS 45.0%
AGATTTCTATGACGTCAGCC+TGG - chr7_4:21502639-21502658 Msa1144990:CDS 45.0%
! CTTAACTTGATGTGCCCAGT+AGG - chr7_4:21502742-21502761 Msa1144990:CDS 45.0%
TTACCAGTGCAGCAATACCT+AGG + chr7_4:21502838-21502857 None:intergenic 45.0%
CTTCAAAACTGCTTGCCCAA+AGG - chr7_4:21502903-21502922 Msa1144990:CDS 45.0%
GTGCAAGTAGCAATACTGGT+AGG + chr7_4:21502952-21502971 None:intergenic 45.0%
GAAGAAGAGAGCGGTGAAGA+TGG + chr7_4:21502146-21502165 None:intergenic 50.0%
GAAAGCAGCGAAGAAGAGAG+CGG + chr7_4:21502155-21502174 None:intergenic 50.0%
TTCCTAATCGCATACCCTCC+AGG - chr7_4:21502172-21502191 Msa1144990:three_prime_UTR 50.0%
! TACCTGGAGGGTATGCGATT+AGG + chr7_4:21502177-21502196 None:intergenic 50.0%
GTGTGAGAGAGAAGAGAAGG+AGG + chr7_4:21502217-21502236 None:intergenic 50.0%
ACAATGGTCAGGCCGTTTCT+GGG - chr7_4:21502480-21502499 Msa1144990:CDS 50.0%
TCTCTCTTCTGCAACGGCAT+AGG - chr7_4:21502568-21502587 Msa1144990:CDS 50.0%
GTAAGTTGTAACCGTCGACC+AGG + chr7_4:21502660-21502679 None:intergenic 50.0%
GTCACGTGACAAGAAGCAAG+TGG - chr7_4:21502777-21502796 Msa1144990:CDS 50.0%
ACGTGACAAGAAGCAAGTGG+TGG - chr7_4:21502780-21502799 Msa1144990:CDS 50.0%
CGTGACAAGAAGCAAGTGGT+GGG - chr7_4:21502781-21502800 Msa1144990:CDS 50.0%
!! GTGCTGCTTTCAACTCTCCT+AGG - chr7_4:21502818-21502837 Msa1144990:CDS 50.0%
! TCTCCTAGGTATTGCTGCAC+TGG - chr7_4:21502832-21502851 Msa1144990:CDS 50.0%
! TGAATAAGCAGTGGGCTTGC+AGG + chr7_4:21502878-21502897 None:intergenic 50.0%
GAAGAAGAGAGCGGTGAAGA+TGG + chr7_4:21502146-21502165 None:intergenic 50.0%
GAAAGCAGCGAAGAAGAGAG+CGG + chr7_4:21502155-21502174 None:intergenic 50.0%
TTCCTAATCGCATACCCTCC+AGG - chr7_4:21502172-21502191 Msa1144990:three_prime_UTR 50.0%
! TACCTGGAGGGTATGCGATT+AGG + chr7_4:21502177-21502196 None:intergenic 50.0%
GTGTGAGAGAGAAGAGAAGG+AGG + chr7_4:21502217-21502236 None:intergenic 50.0%
ACAATGGTCAGGCCGTTTCT+GGG - chr7_4:21502480-21502499 Msa1144990:CDS 50.0%
TCTCTCTTCTGCAACGGCAT+AGG - chr7_4:21502568-21502587 Msa1144990:CDS 50.0%
GTAAGTTGTAACCGTCGACC+AGG + chr7_4:21502660-21502679 None:intergenic 50.0%
GTCACGTGACAAGAAGCAAG+TGG - chr7_4:21502777-21502796 Msa1144990:CDS 50.0%
ACGTGACAAGAAGCAAGTGG+TGG - chr7_4:21502780-21502799 Msa1144990:CDS 50.0%
CGTGACAAGAAGCAAGTGGT+GGG - chr7_4:21502781-21502800 Msa1144990:CDS 50.0%
!! GTGCTGCTTTCAACTCTCCT+AGG - chr7_4:21502818-21502837 Msa1144990:CDS 50.0%
! TCTCCTAGGTATTGCTGCAC+TGG - chr7_4:21502832-21502851 Msa1144990:CDS 50.0%
! TGAATAAGCAGTGGGCTTGC+AGG + chr7_4:21502878-21502897 None:intergenic 50.0%
GGTGAAGATGGAAGCAGCCA+TGG + chr7_4:21502134-21502153 None:intergenic 55.0%
GTTGGATTGCTGGCCACACT+GGG + chr7_4:21502381-21502400 None:intergenic 55.0%
!! AGAATGGGTTTTCCGGCACC+GGG + chr7_4:21502403-21502422 None:intergenic 55.0%
!! CAGAATGGGTTTTCCGGCAC+CGG + chr7_4:21502404-21502423 None:intergenic 55.0%
! CCATTGTGGTGGGACTTGGA+GGG + chr7_4:21502467-21502486 None:intergenic 55.0%
! ACCATTGTGGTGGGACTTGG+AGG + chr7_4:21502468-21502487 None:intergenic 55.0%
! CTGACCATTGTGGTGGGACT+TGG + chr7_4:21502471-21502490 None:intergenic 55.0%
CAAGTCCCACCACAATGGTC+AGG - chr7_4:21502469-21502488 Msa1144990:CDS 55.0%
AACGGCCTGACCATTGTGGT+GGG + chr7_4:21502477-21502496 None:intergenic 55.0%
AAACGGCCTGACCATTGTGG+TGG + chr7_4:21502478-21502497 None:intergenic 55.0%
CAGAAACGGCCTGACCATTG+TGG + chr7_4:21502481-21502500 None:intergenic 55.0%
CACAATGGTCAGGCCGTTTC+TGG - chr7_4:21502479-21502498 Msa1144990:CDS 55.0%
CAATGGTCAGGCCGTTTCTG+GGG - chr7_4:21502481-21502500 Msa1144990:CDS 55.0%
GGCGGATCTCTCTTCTGCAA+CGG - chr7_4:21502562-21502581 Msa1144990:CDS 55.0%
CTCTTCTGCAACGGCATAGG+CGG - chr7_4:21502571-21502590 Msa1144990:CDS 55.0%
TATGACGTCAGCCTGGTCGA+CGG - chr7_4:21502646-21502665 Msa1144990:CDS 55.0%
ACCTCACCTGCAACCCTACT+GGG + chr7_4:21502759-21502778 None:intergenic 55.0%
ATGATCAACGGCGGTGACGA+GGG + chr7_4:21503002-21503021 None:intergenic 55.0%
GGTGAAGATGGAAGCAGCCA+TGG + chr7_4:21502134-21502153 None:intergenic 55.0%
GTTGGATTGCTGGCCACACT+GGG + chr7_4:21502381-21502400 None:intergenic 55.0%
!! AGAATGGGTTTTCCGGCACC+GGG + chr7_4:21502403-21502422 None:intergenic 55.0%
!! CAGAATGGGTTTTCCGGCAC+CGG + chr7_4:21502404-21502423 None:intergenic 55.0%
! CCATTGTGGTGGGACTTGGA+GGG + chr7_4:21502467-21502486 None:intergenic 55.0%
! ACCATTGTGGTGGGACTTGG+AGG + chr7_4:21502468-21502487 None:intergenic 55.0%
! CTGACCATTGTGGTGGGACT+TGG + chr7_4:21502471-21502490 None:intergenic 55.0%
CAAGTCCCACCACAATGGTC+AGG - chr7_4:21502469-21502488 Msa1144990:CDS 55.0%
AACGGCCTGACCATTGTGGT+GGG + chr7_4:21502477-21502496 None:intergenic 55.0%
AAACGGCCTGACCATTGTGG+TGG + chr7_4:21502478-21502497 None:intergenic 55.0%
CAGAAACGGCCTGACCATTG+TGG + chr7_4:21502481-21502500 None:intergenic 55.0%
CACAATGGTCAGGCCGTTTC+TGG - chr7_4:21502479-21502498 Msa1144990:CDS 55.0%
CAATGGTCAGGCCGTTTCTG+GGG - chr7_4:21502481-21502500 Msa1144990:CDS 55.0%
GGCGGATCTCTCTTCTGCAA+CGG - chr7_4:21502562-21502581 Msa1144990:CDS 55.0%
CTCTTCTGCAACGGCATAGG+CGG - chr7_4:21502571-21502590 Msa1144990:CDS 55.0%
TATGACGTCAGCCTGGTCGA+CGG - chr7_4:21502646-21502665 Msa1144990:CDS 55.0%
ACCTCACCTGCAACCCTACT+GGG + chr7_4:21502759-21502778 None:intergenic 55.0%
ATGATCAACGGCGGTGACGA+GGG + chr7_4:21503002-21503021 None:intergenic 55.0%
ACAAGTGTCCCCACCCAGTG+TGG - chr7_4:21502365-21502384 Msa1144990:CDS 60.0%
ATTGCTGGCCACACTGGGTG+GGG + chr7_4:21502376-21502395 None:intergenic 60.0%
GATTGCTGGCCACACTGGGT+GGG + chr7_4:21502377-21502396 None:intergenic 60.0%
GGTTGGATTGCTGGCCACAC+TGG + chr7_4:21502382-21502401 None:intergenic 60.0%
GTGTGGCCAGCAATCCAACC+CGG - chr7_4:21502382-21502401 Msa1144990:CDS 60.0%
! CGGTGCCGGAAAACCCATTC+TGG - chr7_4:21502402-21502421 Msa1144990:CDS 60.0%
!! GCGGGCCAGAATGGGTTTTC+CGG + chr7_4:21502410-21502429 None:intergenic 60.0%
GGAAAACCCATTCTGGCCCG+CGG - chr7_4:21502409-21502428 Msa1144990:CDS 60.0%
CCCTCCAAGTCCCACCACAA+TGG - chr7_4:21502464-21502483 Msa1144990:CDS 60.0%
ACCTTCGACGCATCAGGCCA+CGG - chr7_4:21502517-21502536 Msa1144990:CDS 60.0%
ACTCAGCGAGTGTGGCTGGT+GGG + chr7_4:21502600-21502619 None:intergenic 60.0%
AACTCAGCGAGTGTGGCTGG+TGG + chr7_4:21502601-21502620 None:intergenic 60.0%
GTGAACTCAGCGAGTGTGGC+TGG + chr7_4:21502604-21502623 None:intergenic 60.0%
GATGTGCCCAGTAGGGTTGC+AGG - chr7_4:21502750-21502769 Msa1144990:CDS 60.0%
GACCTCACCTGCAACCCTAC+TGG + chr7_4:21502760-21502779 None:intergenic 60.0%
! AGTGGGCTTGCAGGTCTGTG+GGG + chr7_4:21502869-21502888 None:intergenic 60.0%
! CAGTGGGCTTGCAGGTCTGT+GGG + chr7_4:21502870-21502889 None:intergenic 60.0%
GATGATCAACGGCGGTGACG+AGG + chr7_4:21503003-21503022 None:intergenic 60.0%
ACAAGTGTCCCCACCCAGTG+TGG - chr7_4:21502365-21502384 Msa1144990:CDS 60.0%
ATTGCTGGCCACACTGGGTG+GGG + chr7_4:21502376-21502395 None:intergenic 60.0%
GATTGCTGGCCACACTGGGT+GGG + chr7_4:21502377-21502396 None:intergenic 60.0%
GGTTGGATTGCTGGCCACAC+TGG + chr7_4:21502382-21502401 None:intergenic 60.0%
GTGTGGCCAGCAATCCAACC+CGG - chr7_4:21502382-21502401 Msa1144990:CDS 60.0%
! CGGTGCCGGAAAACCCATTC+TGG - chr7_4:21502402-21502421 Msa1144990:CDS 60.0%
!! GCGGGCCAGAATGGGTTTTC+CGG + chr7_4:21502410-21502429 None:intergenic 60.0%
GGAAAACCCATTCTGGCCCG+CGG - chr7_4:21502409-21502428 Msa1144990:CDS 60.0%
CCCTCCAAGTCCCACCACAA+TGG - chr7_4:21502464-21502483 Msa1144990:CDS 60.0%
ACCTTCGACGCATCAGGCCA+CGG - chr7_4:21502517-21502536 Msa1144990:CDS 60.0%
ACTCAGCGAGTGTGGCTGGT+GGG + chr7_4:21502600-21502619 None:intergenic 60.0%
AACTCAGCGAGTGTGGCTGG+TGG + chr7_4:21502601-21502620 None:intergenic 60.0%
GTGAACTCAGCGAGTGTGGC+TGG + chr7_4:21502604-21502623 None:intergenic 60.0%
GATGTGCCCAGTAGGGTTGC+AGG - chr7_4:21502750-21502769 Msa1144990:CDS 60.0%
GACCTCACCTGCAACCCTAC+TGG + chr7_4:21502760-21502779 None:intergenic 60.0%
! AGTGGGCTTGCAGGTCTGTG+GGG + chr7_4:21502869-21502888 None:intergenic 60.0%
! CAGTGGGCTTGCAGGTCTGT+GGG + chr7_4:21502870-21502889 None:intergenic 60.0%
GATGATCAACGGCGGTGACG+AGG + chr7_4:21503003-21503022 None:intergenic 60.0%
GGATTGCTGGCCACACTGGG+TGG + chr7_4:21502378-21502397 None:intergenic 65.0%
CCAGCAATCCAACCCGGTGC+CGG - chr7_4:21502388-21502407 Msa1144990:CDS 65.0%
!! TGGGTTTTCCGGCACCGGGT+TGG + chr7_4:21502399-21502418 None:intergenic 65.0%
AAACCCATTCTGGCCCGCGG+CGG - chr7_4:21502412-21502431 Msa1144990:CDS 65.0%
AGCCGTGACGGCCCCAGAAA+CGG + chr7_4:21502495-21502514 None:intergenic 65.0%
! CGTCGAAGGTGCAGCCGTGA+CGG + chr7_4:21502507-21502526 None:intergenic 65.0%
GGCTGCACCTTCGACGCATC+AGG - chr7_4:21502511-21502530 Msa1144990:CDS 65.0%
CATTGCGCCACCGGAGACTG+CGG - chr7_4:21502541-21502560 Msa1144990:CDS 65.0%
GAGAGATCCGCCGCAGTCTC+CGG + chr7_4:21502554-21502573 None:intergenic 65.0%
CTCAGCGAGTGTGGCTGGTG+GGG + chr7_4:21502599-21502618 None:intergenic 65.0%
GCCCAGTAGGGTTGCAGGTG+AGG - chr7_4:21502755-21502774 Msa1144990:CDS 65.0%
! GCAGTGGGCTTGCAGGTCTG+TGG + chr7_4:21502871-21502890 None:intergenic 65.0%
GGATTGCTGGCCACACTGGG+TGG + chr7_4:21502378-21502397 None:intergenic 65.0%
CCAGCAATCCAACCCGGTGC+CGG - chr7_4:21502388-21502407 Msa1144990:CDS 65.0%
!! TGGGTTTTCCGGCACCGGGT+TGG + chr7_4:21502399-21502418 None:intergenic 65.0%
AAACCCATTCTGGCCCGCGG+CGG - chr7_4:21502412-21502431 Msa1144990:CDS 65.0%
AGCCGTGACGGCCCCAGAAA+CGG + chr7_4:21502495-21502514 None:intergenic 65.0%
! CGTCGAAGGTGCAGCCGTGA+CGG + chr7_4:21502507-21502526 None:intergenic 65.0%
GGCTGCACCTTCGACGCATC+AGG - chr7_4:21502511-21502530 Msa1144990:CDS 65.0%
CATTGCGCCACCGGAGACTG+CGG - chr7_4:21502541-21502560 Msa1144990:CDS 65.0%
GAGAGATCCGCCGCAGTCTC+CGG + chr7_4:21502554-21502573 None:intergenic 65.0%
CTCAGCGAGTGTGGCTGGTG+GGG + chr7_4:21502599-21502618 None:intergenic 65.0%
GCCCAGTAGGGTTGCAGGTG+AGG - chr7_4:21502755-21502774 Msa1144990:CDS 65.0%
! GCAGTGGGCTTGCAGGTCTG+TGG + chr7_4:21502871-21502890 None:intergenic 65.0%
! CCGGCACCGGGTTGGATTGC+TGG + chr7_4:21502391-21502410 None:intergenic 70.0%
AAGCCGCCGCGGGCCAGAAT+GGG + chr7_4:21502418-21502437 None:intergenic 70.0%
TGGGAGGTTGAAGCCGCCGC+GGG + chr7_4:21502428-21502447 None:intergenic 70.0%
GTGGGAGGTTGAAGCCGCCG+CGG + chr7_4:21502429-21502448 None:intergenic 70.0%
!! GGCCGTTTCTGGGGCCGTCA+CGG - chr7_4:21502490-21502509 Msa1144990:CDS 70.0%
GCCGTGGCCTGATGCGTCGA+AGG + chr7_4:21502521-21502540 None:intergenic 70.0%
CGCAGTCTCCGGTGGCGCAA+TGG + chr7_4:21502543-21502562 None:intergenic 70.0%
AGATCCGCCGCAGTCTCCGG+TGG + chr7_4:21502551-21502570 None:intergenic 70.0%
! CCGGCACCGGGTTGGATTGC+TGG + chr7_4:21502391-21502410 None:intergenic 70.0%
AAGCCGCCGCGGGCCAGAAT+GGG + chr7_4:21502418-21502437 None:intergenic 70.0%
TGGGAGGTTGAAGCCGCCGC+GGG + chr7_4:21502428-21502447 None:intergenic 70.0%
GTGGGAGGTTGAAGCCGCCG+CGG + chr7_4:21502429-21502448 None:intergenic 70.0%
!! GGCCGTTTCTGGGGCCGTCA+CGG - chr7_4:21502490-21502509 Msa1144990:CDS 70.0%
GCCGTGGCCTGATGCGTCGA+AGG + chr7_4:21502521-21502540 None:intergenic 70.0%
CGCAGTCTCCGGTGGCGCAA+TGG + chr7_4:21502543-21502562 None:intergenic 70.0%
AGATCCGCCGCAGTCTCCGG+TGG + chr7_4:21502551-21502570 None:intergenic 70.0%
GAAGCCGCCGCGGGCCAGAA+TGG + chr7_4:21502419-21502438 None:intergenic 75.0%
GGCCACGGCCATTGCGCCAC+CGG - chr7_4:21502532-21502551 Msa1144990:CDS 75.0%
CTCCGGTGGCGCAATGGCCG+TGG + chr7_4:21502537-21502556 None:intergenic 75.0%
TGCGCCACCGGAGACTGCGG+CGG - chr7_4:21502544-21502563 Msa1144990:CDS 75.0%
GAAGCCGCCGCGGGCCAGAA+TGG + chr7_4:21502419-21502438 None:intergenic 75.0%
GGCCACGGCCATTGCGCCAC+CGG - chr7_4:21502532-21502551 Msa1144990:CDS 75.0%
CTCCGGTGGCGCAATGGCCG+TGG + chr7_4:21502537-21502556 None:intergenic 75.0%
TGCGCCACCGGAGACTGCGG+CGG - chr7_4:21502544-21502563 Msa1144990:CDS 75.0%
Chromosome Type Strat End Strand Name
chr7_4 gene 21502003 21503262 21502003 ID=Msa1144990;Name=Msa1144990
chr7_4 mRNA 21502003 21503262 21502003 ID=Msa1144990-mRNA-1;Parent=Msa1144990;Name=Msa1144990-mRNA-1;_AED=0.05;_eAED=0.05;_QI=130|1|1|1|1|1|2|245|250
chr7_4 exon 21502003 21502939 21502003 ID=Msa1144990-mRNA-1:exon:5209;Parent=Msa1144990-mRNA-1
chr7_4 exon 21503072 21503262 21503072 ID=Msa1144990-mRNA-1:exon:5208;Parent=Msa1144990-mRNA-1
chr7_4 five_prime_UTR 21503133 21503262 21503133 ID=Msa1144990-mRNA-1:five_prime_utr;Parent=Msa1144990-mRNA-1
chr7_4 CDS 21503072 21503132 21503072 ID=Msa1144990-mRNA-1:cds;Parent=Msa1144990-mRNA-1
chr7_4 CDS 21502248 21502939 21502248 ID=Msa1144990-mRNA-1:cds;Parent=Msa1144990-mRNA-1
chr7_4 three_prime_UTR 21502003 21502247 21502003 ID=Msa1144990-mRNA-1:three_prime_utr;Parent=Msa1144990-mRNA-1
Gene Sequence

>Msa1144990

ATGGCTGCTTCCATCTTCACCGCTCTCTTCTTCGCTGCTTTCCTAATCGCATACCCTCCAGTAGTGAAGATATCAGCAGCAGCATCAGTAGTATTTTACAACAAGTGTCCCCACCCAGTGTGGCCAGCAATCCAACCCGGTGCCGGAAAACCCATTCTGGCCCGCGGCGGCTTCAACCTCCCACCAAACAAAGCTTATTCCCTCCAAGTCCCACCACAATGGTCAGGCCGTTTCTGGGGCCGTCACGGCTGCACCTTCGACGCATCAGGCCACGGCCATTGCGCCACCGGAGACTGCGGCGGATCTCTCTTCTGCAACGGCATAGGCGGAACCCCACCAGCCACACTCGCTGAGTTCACATTTGGAAAAGATCTAGATTTCTATGACGTCAGCCTGGTCGACGGTTACAACTTACCGATTTCCATTACACCTTTCAAGGGATCTGGAAAATGTAGCTATGCTGGCTGTGTGAGTGATCTTAACTTGATGTGCCCAGTAGGGTTGCAGGTGAGGTCACGTGACAAGAAGCAAGTGGTGGGTTGTAGAAGTGCTTGTGCTGCTTTCAACTCTCCTAGGTATTGCTGCACTGGTAACTTTGGTACCCCACAGACCTGCAAGCCCACTGCTTATTCAAGAATCTTCAAAACTGCTTGCCCAAAGGCTTACTCTTATGCTTATGATGACCCTACCAGTATTGCTACTTGCACCAATGCTAGTTACATGATCACTTTCTGCCCTCGTCACCGCCGTTGA

Protein sequence

>Msa1144990

MAASIFTALFFAAFLIAYPPVVKISAAASVVFYNKCPHPVWPAIQPGAGKPILARGGFNLPPNKAYSLQVPPQWSGRFWGRHGCTFDASGHGHCATGDCGGSLFCNGIGGTPPATLAEFTFGKDLDFYDVSLVDGYNLPISITPFKGSGKCSYAGCVSDLNLMCPVGLQVRSRDKKQVVGCRSACAAFNSPRYCCTGNFGTPQTCKPTAYSRIFKTACPKAYSYAYDDPTSIATCTNASYMITFCPRHRR*