AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa1365740

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa1365740 MtrunA17_Chr3g0145051 83.036 224 21 7 1 222 1 209 1.16e-77 232
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa1365740 AT1G76180.1 46.948 213 76 6 1 209 1 180 3.77e-22 89.7
Msa1365740 AT1G76180.2 46.948 213 76 6 1 209 1 180 3.77e-22 89.7
Msa1365740 AT1G20450.1 39.015 264 95 11 1 209 1 253 9.49e-21 87.8
Msa1365740 AT1G20440.1 40.000 255 93 11 1 201 1 249 5.41e-20 85.9
Msa1365740 AT1G20450.2 39.163 263 95 11 1 209 1 252 6.49e-20 85.5

Find 55 sgRNAs with CRISPR-Local

Find 144 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
AGGAGAGAAGAAAGGTATTT+TGG 0.202968 tig0018386:+26256 Msa1365740:CDS
TGGTGTATCAAAAGAAATTA+TGG 0.246947 tig0018386:+26579 Msa1365740:three_prime_UTR
TCATGTTCAGTAGCAGTCTT+AGG 0.274530 tig0018386:-26311 None:intergenic
AGGTTTCCTGGACAAAATTA+AGG 0.300059 tig0018386:+26121 Msa1365740:CDS
AAAATTAAGGAGAAGCTTCC+AGG 0.351108 tig0018386:+26134 Msa1365740:CDS
TGAAGAGAAGAAAGGTTTCC+TGG 0.355767 tig0018386:+26109 Msa1365740:CDS
TCTTCTACTTTGGTCTCTGA+TGG 0.368786 tig0018386:-25695 None:intergenic
AAAGAAGAAGAAAGAAAAGA+AGG 0.380764 tig0018386:+26019 Msa1365740:CDS
GAAAGAAAAGAAGGAGAAGA+AGG 0.381297 tig0018386:+26028 Msa1365740:CDS
TCGAGTGAGGAGGAAGTTGA+TGG 0.382576 tig0018386:+25984 Msa1365740:CDS
ATTATTAATGCTTATGTAGC+TGG 0.390617 tig0018386:-25442 None:intergenic
GAGAAAGTTGATGTTGTTGA+TGG 0.398275 tig0018386:+26071 Msa1365740:CDS
CACAGAAAAGAAAAGTTGCT+TGG 0.416973 tig0018386:+26530 Msa1365740:three_prime_UTR
TTTGATCTCTGTTTCAGAGT+TGG 0.421884 tig0018386:-25558 None:intergenic
AACAAGATTAATCAAGCAAA+TGG 0.444116 tig0018386:-25468 None:intergenic
GTCTCAGCAGATGGCACAGC+AGG 0.446448 tig0018386:-26206 None:intergenic
ACAGAAAAGAAAAGTTGCTT+GGG 0.458376 tig0018386:+26531 Msa1365740:three_prime_UTR
ACAGCAGGAGCAACAACAAC+AGG 0.468581 tig0018386:-26191 None:intergenic
ATGATGAAAATCAAAGGAGA+TGG 0.470512 tig0018386:-25364 None:intergenic
AAAGAAACACACCAGCCTCT+TGG 0.485431 tig0018386:+25733 Msa1365740:CDS
AGGAGGAAGTTGATGGAGAG+AGG 0.487866 tig0018386:+25991 Msa1365740:CDS
CATGTTCAGTAGCAGTCTTA+GGG 0.495120 tig0018386:-26310 None:intergenic
GTTGTTGTTGTCTCAGCAGA+TGG 0.500792 tig0018386:-26215 None:intergenic
GCTTAGTAATCAATTCATCA+TGG 0.502627 tig0018386:+25496 Msa1365740:exon
CTCTGTTTCAGAGTTGGTTG+CGG 0.507900 tig0018386:-25552 None:intergenic
ACAACATCAACTTTCTCTAC+TGG 0.509084 tig0018386:-26065 None:intergenic
TGATGAAAATCAAAGGAGAT+GGG 0.516533 tig0018386:-25363 None:intergenic
CACAGAAAATCACAATGCCT+TGG 0.529006 tig0018386:-26440 None:intergenic
GTTGCAACAGCATCCTCTTG+AGG 0.534346 tig0018386:-25638 None:intergenic
AGAAAAGAAGGAGAAGAAGG+AGG 0.540684 tig0018386:+26031 Msa1365740:CDS
GTGAAGTTTCTCCAAGAGGC+TGG 0.546170 tig0018386:-25744 None:intergenic
GCAAGCACTGAAGAGAAGAA+AGG 0.548209 tig0018386:+26101 Msa1365740:CDS
CATGATCAAGGAGAGAAGAA+AGG 0.558513 tig0018386:+26248 Msa1365740:CDS
TTTAATTGATTTCAATACCA+AGG 0.563023 tig0018386:+26423 Msa1365740:three_prime_UTR
TAATCAATTCATCATGGCTG+AGG 0.573271 tig0018386:+25502 Msa1365740:exon
ACAACAGCTAGTCATGATCA+AGG 0.576125 tig0018386:+26236 Msa1365740:CDS
CTGAAACAGAGATCAAAGAC+AGG 0.576169 tig0018386:+25564 Msa1365740:CDS
GTTTCGATGATGAAAATCAA+AGG 0.582073 tig0018386:-25370 None:intergenic
TGTTTCAGAGTTGGTTGCGG+TGG 0.586483 tig0018386:-25549 None:intergenic
AGGAAGTTGATGGAGAGAGG+AGG 0.587456 tig0018386:+25994 Msa1365740:CDS
GGAGCAACAACAACAGGTGG+TGG 0.591480 tig0018386:-26185 None:intergenic
AAGATCAAAGAGAAGATACC+TGG 0.609148 tig0018386:+26281 Msa1365740:CDS
AGAACATATTAAGCCTCAAG+AGG 0.614539 tig0018386:+25625 Msa1365740:CDS
GCAGTCTTAGGGTGATAACC+AGG 0.619784 tig0018386:-26299 None:intergenic
TATGCATGTATAGTCGAGTG+AGG 0.638826 tig0018386:+25971 Msa1365740:intron
GCATGTATAGTCGAGTGAGG+AGG 0.641425 tig0018386:+25974 Msa1365740:intron
ATCGGTGAAGTTTCTCCAAG+AGG 0.645229 tig0018386:-25748 None:intergenic
TGAAACAGAGATCAAAGACA+GGG 0.654650 tig0018386:+25565 Msa1365740:CDS
GATGAAAATCAAAGGAGATG+GGG 0.656892 tig0018386:-25362 None:intergenic
GCAGGAGCAACAACAACAGG+TGG 0.666368 tig0018386:-26188 None:intergenic
AAAGCCACAAAACAACACAA+TGG 0.687803 tig0018386:-26388 None:intergenic
AGCTTGAAGAGCTATCAGAT+CGG 0.690728 tig0018386:-25766 None:intergenic
AGACAACAAAGATCATCACA+AGG 0.715357 tig0018386:+26334 Msa1365740:CDS
GGAGAATCAGAACAAGTACG+AGG 0.738041 tig0018386:+25523 Msa1365740:CDS
GAAACAGAGATCAAAGACAG+GGG 0.744878 tig0018386:+25566 Msa1365740:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! TTTATCTGTTCTTAAAAAAT+TGG + tig0018386:26559-26578 Msa1365740:three_prime_UTR 15.0%
!! TTTATCTGTTCTTAAAAAAT+TGG + tig0018386:26559-26578 Msa1365740:three_prime_UTR 15.0%
!!! TTTAATTGATTTCAATACCA+AGG + tig0018386:26423-26442 Msa1365740:three_prime_UTR 20.0%
!!! TTTAATTGATTTCAATACCA+AGG + tig0018386:26423-26442 Msa1365740:three_prime_UTR 20.0%
! ATTATTAATGCTTATGTAGC+TGG - tig0018386:25445-25464 None:intergenic 25.0%
! AACAAGATTAATCAAGCAAA+TGG - tig0018386:25471-25490 None:intergenic 25.0%
!! TTCTTCTTTTTCTTCTACTT+TGG - tig0018386:25708-25727 None:intergenic 25.0%
! AAAGTAGAAGAAAAAGAAGA+AGG + tig0018386:25707-25726 Msa1365740:CDS 25.0%
! AAAGAAGAAGAAAGAAAAGA+AGG + tig0018386:26019-26038 Msa1365740:CDS 25.0%
! TGGTGTATCAAAAGAAATTA+TGG + tig0018386:26579-26598 Msa1365740:three_prime_UTR 25.0%
! ATTATTAATGCTTATGTAGC+TGG - tig0018386:25445-25464 None:intergenic 25.0%
! AACAAGATTAATCAAGCAAA+TGG - tig0018386:25471-25490 None:intergenic 25.0%
!! TTCTTCTTTTTCTTCTACTT+TGG - tig0018386:25708-25727 None:intergenic 25.0%
! AAAGTAGAAGAAAAAGAAGA+AGG + tig0018386:25707-25726 Msa1365740:CDS 25.0%
! AAAGAAGAAGAAAGAAAAGA+AGG + tig0018386:26019-26038 Msa1365740:CDS 25.0%
! TGGTGTATCAAAAGAAATTA+TGG + tig0018386:26579-26598 Msa1365740:three_prime_UTR 25.0%
TGATGAAAATCAAAGGAGAT+GGG - tig0018386:25366-25385 None:intergenic 30.0%
ATGATGAAAATCAAAGGAGA+TGG - tig0018386:25367-25386 None:intergenic 30.0%
GTTTCGATGATGAAAATCAA+AGG - tig0018386:25373-25392 None:intergenic 30.0%
GCTTAGTAATCAATTCATCA+TGG + tig0018386:25496-25515 Msa1365740:exon 30.0%
! TTTTCTAGGTGGTAAGAAAA+AGG + tig0018386:25598-25617 Msa1365740:CDS 30.0%
ACAGAAAAGAAAAGTTGCTT+GGG + tig0018386:26531-26550 Msa1365740:three_prime_UTR 30.0%
TGATGAAAATCAAAGGAGAT+GGG - tig0018386:25366-25385 None:intergenic 30.0%
ATGATGAAAATCAAAGGAGA+TGG - tig0018386:25367-25386 None:intergenic 30.0%
GTTTCGATGATGAAAATCAA+AGG - tig0018386:25373-25392 None:intergenic 30.0%
GCTTAGTAATCAATTCATCA+TGG + tig0018386:25496-25515 Msa1365740:exon 30.0%
! TTTTCTAGGTGGTAAGAAAA+AGG + tig0018386:25598-25617 Msa1365740:CDS 30.0%
ACAGAAAAGAAAAGTTGCTT+GGG + tig0018386:26531-26550 Msa1365740:three_prime_UTR 30.0%
GATGAAAATCAAAGGAGATG+GGG - tig0018386:25365-25384 None:intergenic 35.0%
TAATCAATTCATCATGGCTG+AGG + tig0018386:25502-25521 Msa1365740:exon 35.0%
TTTGATCTCTGTTTCAGAGT+TGG - tig0018386:25561-25580 None:intergenic 35.0%
TGAAACAGAGATCAAAGACA+GGG + tig0018386:25565-25584 Msa1365740:CDS 35.0%
!!! AGGGGTGTTTTTGATTTTCT+AGG + tig0018386:25584-25603 Msa1365740:CDS 35.0%
!!! GGTGTTTTTGATTTTCTAGG+TGG + tig0018386:25587-25606 Msa1365740:CDS 35.0%
AGAACATATTAAGCCTCAAG+AGG + tig0018386:25625-25644 Msa1365740:CDS 35.0%
!! TGCAACTGATTTTAGTCACA+AGG + tig0018386:25655-25674 Msa1365740:CDS 35.0%
TGTATTGAATACGTCTCAAG+TGG + tig0018386:25851-25870 Msa1365740:intron 35.0%
GAAAGAAAAGAAGGAGAAGA+AGG + tig0018386:26028-26047 Msa1365740:CDS 35.0%
ACAACATCAACTTTCTCTAC+TGG - tig0018386:26068-26087 None:intergenic 35.0%
!! GAGAAAGTTGATGTTGTTGA+TGG + tig0018386:26071-26090 Msa1365740:CDS 35.0%
AGGTTTCCTGGACAAAATTA+AGG + tig0018386:26121-26140 Msa1365740:CDS 35.0%
AAAATTAAGGAGAAGCTTCC+AGG + tig0018386:26134-26153 Msa1365740:CDS 35.0%
!!! AGGAGAGAAGAAAGGTATTT+TGG + tig0018386:26256-26275 Msa1365740:CDS 35.0%
AAGATCAAAGAGAAGATACC+TGG + tig0018386:26281-26300 Msa1365740:CDS 35.0%
AGACAACAAAGATCATCACA+AGG + tig0018386:26334-26353 Msa1365740:CDS 35.0%
AAAGCCACAAAACAACACAA+TGG - tig0018386:26391-26410 None:intergenic 35.0%
!!! ATTGTGTTGTTTTGTGGCTT+TGG + tig0018386:26390-26409 Msa1365740:three_prime_UTR 35.0%
!!! TTGTGTTGTTTTGTGGCTTT+GGG + tig0018386:26391-26410 Msa1365740:three_prime_UTR 35.0%
CACAGAAAAGAAAAGTTGCT+TGG + tig0018386:26530-26549 Msa1365740:three_prime_UTR 35.0%
GATGAAAATCAAAGGAGATG+GGG - tig0018386:25365-25384 None:intergenic 35.0%
TAATCAATTCATCATGGCTG+AGG + tig0018386:25502-25521 Msa1365740:exon 35.0%
TTTGATCTCTGTTTCAGAGT+TGG - tig0018386:25561-25580 None:intergenic 35.0%
TGAAACAGAGATCAAAGACA+GGG + tig0018386:25565-25584 Msa1365740:CDS 35.0%
!!! AGGGGTGTTTTTGATTTTCT+AGG + tig0018386:25584-25603 Msa1365740:CDS 35.0%
!!! GGTGTTTTTGATTTTCTAGG+TGG + tig0018386:25587-25606 Msa1365740:CDS 35.0%
AGAACATATTAAGCCTCAAG+AGG + tig0018386:25625-25644 Msa1365740:CDS 35.0%
!! TGCAACTGATTTTAGTCACA+AGG + tig0018386:25655-25674 Msa1365740:CDS 35.0%
TGTATTGAATACGTCTCAAG+TGG + tig0018386:25851-25870 Msa1365740:intron 35.0%
GAAAGAAAAGAAGGAGAAGA+AGG + tig0018386:26028-26047 Msa1365740:CDS 35.0%
ACAACATCAACTTTCTCTAC+TGG - tig0018386:26068-26087 None:intergenic 35.0%
!! GAGAAAGTTGATGTTGTTGA+TGG + tig0018386:26071-26090 Msa1365740:CDS 35.0%
AGGTTTCCTGGACAAAATTA+AGG + tig0018386:26121-26140 Msa1365740:CDS 35.0%
AAAATTAAGGAGAAGCTTCC+AGG + tig0018386:26134-26153 Msa1365740:CDS 35.0%
!!! AGGAGAGAAGAAAGGTATTT+TGG + tig0018386:26256-26275 Msa1365740:CDS 35.0%
AAGATCAAAGAGAAGATACC+TGG + tig0018386:26281-26300 Msa1365740:CDS 35.0%
AGACAACAAAGATCATCACA+AGG + tig0018386:26334-26353 Msa1365740:CDS 35.0%
AAAGCCACAAAACAACACAA+TGG - tig0018386:26391-26410 None:intergenic 35.0%
!!! ATTGTGTTGTTTTGTGGCTT+TGG + tig0018386:26390-26409 Msa1365740:three_prime_UTR 35.0%
!!! TTGTGTTGTTTTGTGGCTTT+GGG + tig0018386:26391-26410 Msa1365740:three_prime_UTR 35.0%
CACAGAAAAGAAAAGTTGCT+TGG + tig0018386:26530-26549 Msa1365740:three_prime_UTR 35.0%
CTGAAACAGAGATCAAAGAC+AGG + tig0018386:25564-25583 Msa1365740:CDS 40.0%
GAAACAGAGATCAAAGACAG+GGG + tig0018386:25566-25585 Msa1365740:CDS 40.0%
TCTTCTACTTTGGTCTCTGA+TGG - tig0018386:25698-25717 None:intergenic 40.0%
AGCTTGAAGAGCTATCAGAT+CGG - tig0018386:25769-25788 None:intergenic 40.0%
GATTGAACGTAGTGTCAACA+AGG - tig0018386:25885-25904 None:intergenic 40.0%
TATGCATGTATAGTCGAGTG+AGG + tig0018386:25971-25990 Msa1365740:intron 40.0%
AGAAAAGAAGGAGAAGAAGG+AGG + tig0018386:26031-26050 Msa1365740:CDS 40.0%
TGAAGAGAAGAAAGGTTTCC+TGG + tig0018386:26109-26128 Msa1365740:CDS 40.0%
! GCTTCTCCTTAATTTTGTCC+AGG - tig0018386:26130-26149 None:intergenic 40.0%
ACAACAGCTAGTCATGATCA+AGG + tig0018386:26236-26255 Msa1365740:CDS 40.0%
CATGATCAAGGAGAGAAGAA+AGG + tig0018386:26248-26267 Msa1365740:CDS 40.0%
CATGTTCAGTAGCAGTCTTA+GGG - tig0018386:26313-26332 None:intergenic 40.0%
TCATGTTCAGTAGCAGTCTT+AGG - tig0018386:26314-26333 None:intergenic 40.0%
!!! CGATCCATTGTGTTGTTTTG+TGG + tig0018386:26384-26403 Msa1365740:three_prime_UTR 40.0%
!!! TGTGTTGTTTTGTGGCTTTG+GGG + tig0018386:26392-26411 Msa1365740:three_prime_UTR 40.0%
CACAGAAAATCACAATGCCT+TGG - tig0018386:26443-26462 None:intergenic 40.0%
CTGAAACAGAGATCAAAGAC+AGG + tig0018386:25564-25583 Msa1365740:CDS 40.0%
GAAACAGAGATCAAAGACAG+GGG + tig0018386:25566-25585 Msa1365740:CDS 40.0%
TCTTCTACTTTGGTCTCTGA+TGG - tig0018386:25698-25717 None:intergenic 40.0%
AGCTTGAAGAGCTATCAGAT+CGG - tig0018386:25769-25788 None:intergenic 40.0%
GATTGAACGTAGTGTCAACA+AGG - tig0018386:25885-25904 None:intergenic 40.0%
TATGCATGTATAGTCGAGTG+AGG + tig0018386:25971-25990 Msa1365740:intron 40.0%
AGAAAAGAAGGAGAAGAAGG+AGG + tig0018386:26031-26050 Msa1365740:CDS 40.0%
TGAAGAGAAGAAAGGTTTCC+TGG + tig0018386:26109-26128 Msa1365740:CDS 40.0%
! GCTTCTCCTTAATTTTGTCC+AGG - tig0018386:26130-26149 None:intergenic 40.0%
ACAACAGCTAGTCATGATCA+AGG + tig0018386:26236-26255 Msa1365740:CDS 40.0%
CATGATCAAGGAGAGAAGAA+AGG + tig0018386:26248-26267 Msa1365740:CDS 40.0%
CATGTTCAGTAGCAGTCTTA+GGG - tig0018386:26313-26332 None:intergenic 40.0%
TCATGTTCAGTAGCAGTCTT+AGG - tig0018386:26314-26333 None:intergenic 40.0%
!!! CGATCCATTGTGTTGTTTTG+TGG + tig0018386:26384-26403 Msa1365740:three_prime_UTR 40.0%
!!! TGTGTTGTTTTGTGGCTTTG+GGG + tig0018386:26392-26411 Msa1365740:three_prime_UTR 40.0%
CACAGAAAATCACAATGCCT+TGG - tig0018386:26443-26462 None:intergenic 40.0%
GGAGAATCAGAACAAGTACG+AGG + tig0018386:25523-25542 Msa1365740:CDS 45.0%
! CTCTGTTTCAGAGTTGGTTG+CGG - tig0018386:25555-25574 None:intergenic 45.0%
AAAGAAACACACCAGCCTCT+TGG + tig0018386:25733-25752 Msa1365740:CDS 45.0%
ATCGGTGAAGTTTCTCCAAG+AGG - tig0018386:25751-25770 None:intergenic 45.0%
!! GCAAGCACTGAAGAGAAGAA+AGG + tig0018386:26101-26120 Msa1365740:CDS 45.0%
! TCGTCAGTTTTCTTGTGTCC+TGG - tig0018386:26155-26174 None:intergenic 45.0%
! GTTGTTGTTGTCTCAGCAGA+TGG - tig0018386:26218-26237 None:intergenic 45.0%
!!! GTGTTGTTTTGTGGCTTTGG+GGG + tig0018386:26393-26412 Msa1365740:three_prime_UTR 45.0%
GGAGAATCAGAACAAGTACG+AGG + tig0018386:25523-25542 Msa1365740:CDS 45.0%
! CTCTGTTTCAGAGTTGGTTG+CGG - tig0018386:25555-25574 None:intergenic 45.0%
AAAGAAACACACCAGCCTCT+TGG + tig0018386:25733-25752 Msa1365740:CDS 45.0%
ATCGGTGAAGTTTCTCCAAG+AGG - tig0018386:25751-25770 None:intergenic 45.0%
!! GCAAGCACTGAAGAGAAGAA+AGG + tig0018386:26101-26120 Msa1365740:CDS 45.0%
! TCGTCAGTTTTCTTGTGTCC+TGG - tig0018386:26155-26174 None:intergenic 45.0%
! GTTGTTGTTGTCTCAGCAGA+TGG - tig0018386:26218-26237 None:intergenic 45.0%
!!! GTGTTGTTTTGTGGCTTTGG+GGG + tig0018386:26393-26412 Msa1365740:three_prime_UTR 45.0%
! TGTTTCAGAGTTGGTTGCGG+TGG - tig0018386:25552-25571 None:intergenic 50.0%
GTTGCAACAGCATCCTCTTG+AGG - tig0018386:25641-25660 None:intergenic 50.0%
GTGAAGTTTCTCCAAGAGGC+TGG - tig0018386:25747-25766 None:intergenic 50.0%
ATACGTCTCAAGTGGCAGAG+TGG + tig0018386:25859-25878 Msa1365740:intron 50.0%
GCATGTATAGTCGAGTGAGG+AGG + tig0018386:25974-25993 Msa1365740:intron 50.0%
TCGAGTGAGGAGGAAGTTGA+TGG + tig0018386:25984-26003 Msa1365740:CDS 50.0%
!! AGGAGGAAGTTGATGGAGAG+AGG + tig0018386:25991-26010 Msa1365740:CDS 50.0%
!! AGGAAGTTGATGGAGAGAGG+AGG + tig0018386:25994-26013 Msa1365740:CDS 50.0%
ACAGCAGGAGCAACAACAAC+AGG - tig0018386:26194-26213 None:intergenic 50.0%
GCAGTCTTAGGGTGATAACC+AGG - tig0018386:26302-26321 None:intergenic 50.0%
! TGTTTCAGAGTTGGTTGCGG+TGG - tig0018386:25552-25571 None:intergenic 50.0%
GTTGCAACAGCATCCTCTTG+AGG - tig0018386:25641-25660 None:intergenic 50.0%
GTGAAGTTTCTCCAAGAGGC+TGG - tig0018386:25747-25766 None:intergenic 50.0%
ATACGTCTCAAGTGGCAGAG+TGG + tig0018386:25859-25878 Msa1365740:intron 50.0%
GCATGTATAGTCGAGTGAGG+AGG + tig0018386:25974-25993 Msa1365740:intron 50.0%
TCGAGTGAGGAGGAAGTTGA+TGG + tig0018386:25984-26003 Msa1365740:CDS 50.0%
!! AGGAGGAAGTTGATGGAGAG+AGG + tig0018386:25991-26010 Msa1365740:CDS 50.0%
!! AGGAAGTTGATGGAGAGAGG+AGG + tig0018386:25994-26013 Msa1365740:CDS 50.0%
ACAGCAGGAGCAACAACAAC+AGG - tig0018386:26194-26213 None:intergenic 50.0%
GCAGTCTTAGGGTGATAACC+AGG - tig0018386:26302-26321 None:intergenic 50.0%
GGAGCAACAACAACAGGTGG+TGG - tig0018386:26188-26207 None:intergenic 55.0%
GCAGGAGCAACAACAACAGG+TGG - tig0018386:26191-26210 None:intergenic 55.0%
GGAGCAACAACAACAGGTGG+TGG - tig0018386:26188-26207 None:intergenic 55.0%
GCAGGAGCAACAACAACAGG+TGG - tig0018386:26191-26210 None:intergenic 55.0%
GTCTCAGCAGATGGCACAGC+AGG - tig0018386:26209-26228 None:intergenic 60.0%
GTCTCAGCAGATGGCACAGC+AGG - tig0018386:26209-26228 None:intergenic 60.0%
Chromosome Type Strat End Strand Name
tig0018386 gene 25341 26629 25341 ID=Msa1365740;Name=Msa1365740
tig0018386 mRNA 25341 26629 25341 ID=Msa1365740-mRNA-1;Parent=Msa1365740;Name=Msa1365740-mRNA-1;_AED=0.00;_eAED=0.00;_QI=174|1|1|1|1|1|2|253|222
tig0018386 exon 25341 25790 25341 ID=Msa1365740-mRNA-1:exon:14758;Parent=Msa1365740-mRNA-1
tig0018386 exon 25984 26629 25984 ID=Msa1365740-mRNA-1:exon:14759;Parent=Msa1365740-mRNA-1
tig0018386 five_prime_UTR 25341 25514 25341 ID=Msa1365740-mRNA-1:five_prime_utr;Parent=Msa1365740-mRNA-1
tig0018386 CDS 25515 25790 25515 ID=Msa1365740-mRNA-1:cds;Parent=Msa1365740-mRNA-1
tig0018386 CDS 25984 26376 25984 ID=Msa1365740-mRNA-1:cds;Parent=Msa1365740-mRNA-1
tig0018386 three_prime_UTR 26377 26629 26377 ID=Msa1365740-mRNA-1:three_prime_utr;Parent=Msa1365740-mRNA-1
Gene Sequence

>Msa1365740

ATGGCTGAGGAGAATCAGAACAAGTACGAGGAAACCACCGCAACCAACTCTGAAACAGAGATCAAAGACAGGGGTGTTTTTGATTTTCTAGGTGGTAAGAAAAAGGATGAAGAACATATTAAGCCTCAAGAGGATGCTGTTGCAACTGATTTTAGTCACAAGGTGACTTTGTATGAAGCTCCATCAGAGACCAAAGTAGAAGAAAAAGAAGAAGGTGAAAAGAAACACACCAGCCTCTTGGAGAAACTTCACCGATCTGATAGCTCTTCAAGCTCTTCGAGTGAGGAGGAAGTTGATGGAGAGAGGAGGAAAAAGAAGAAGAAAGAAAAGAAGGAGAAGAAGGAGGACACATCAGTGCCAGTAGAGAAAGTTGATGTTGTTGATGGAACAACAGCAAGCACTGAAGAGAAGAAAGGTTTCCTGGACAAAATTAAGGAGAAGCTTCCAGGACACAAGAAAACTGACGATGTAACAACTCCACCACCTGTTGTTGTTGCTCCTGCTGTGCCATCTGCTGAGACAACAACAACAACAGCTAGTCATGATCAAGGAGAGAAGAAAGGTATTTTGGAAAAGATCAAAGAGAAGATACCTGGTTATCACCCTAAGACTGCTACTGAACATGAAGACAACAAAGATCATCACAAGGATGAGACTACTTCTCATTGA
Protein sequence

>Msa1365740

MAEENQNKYEETTATNSETEIKDRGVFDFLGGKKKDEEHIKPQEDAVATDFSHKVTLYEAPSETKVEEKEEGEKKHTSLLEKLHRSDSSSSSSSEEEVDGERRKKKKKEKKEKKEDTSVPVEKVDVVDGTTASTEEKKGFLDKIKEKLPGHKKTDDVTTPPPVVVAPAVPSAETTTTTASHDQGEKKGILEKIKEKIPGYHPKTATEHEDNKDHHKDETTSH*