Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1369070 | XP_003630258.2 | 95.039 | 645 | 32 | 0 | 1 | 645 | 18 | 662 | 0.0 | 1262 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1369070 | sp|P99177|CSD_STAAN | 23.222 | 478 | 280 | 13 | 73 | 546 | 9 | 403 | 1.91e-20 | 97.8 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1369070 | G7LE12 | 95.039 | 645 | 32 | 0 | 1 | 645 | 18 | 662 | 0.0 | 1262 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0705510 | Msa1369070 | 0.881830 | 1.731859e-70 | -8.615850e-47 |
| Msa1011320 | Msa1369070 | 0.804860 | 1.763429e-49 | -8.615850e-47 |
| Msa1142850 | Msa1369070 | 0.810695 | 1.014329e-50 | -8.615850e-47 |
| Msa1142860 | Msa1369070 | 0.803393 | 3.562215e-49 | -8.615850e-47 |
| Msa1143720 | Msa1369070 | 0.961350 | 1.339014e-119 | -8.615850e-47 |
| Msa1204190 | Msa1369070 | 0.801280 | 9.701239e-49 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1369070 | MtrunA17_Chr8g0384181 | 95.039 | 645 | 32 | 0 | 1 | 645 | 18 | 662 | 0.0 | 1262 |
| Msa1369070 | MtrunA17_Chr8g0384171 | 68.203 | 651 | 169 | 7 | 5 | 645 | 13 | 635 | 0.0 | 915 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
Find 144 sgRNAs with CRISPR-Local
Find 212 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| CAACCCCAACATCAAGATTT+TGG | 0.137304 | tig0018755:+6820 | Msa1369070:CDS |
| TGAGAGCATCGTTAGCATTT+TGG | 0.175651 | tig0018755:+6717 | Msa1369070:CDS |
| AACATAGAAGAGAGGGAAAA+TGG | 0.180904 | tig0018755:+6668 | Msa1369070:CDS |
| CTTAATTTGTGGCAAGAAAT+AGG | 0.183307 | tig0018755:+6947 | Msa1369070:CDS |
| AATCATCTTCTTCCTTTCTA+TGG | 0.211262 | tig0018755:+5185 | Msa1369070:CDS |
| CATTTCCACAAGTTTCTTAA+AGG | 0.219333 | tig0018755:-4997 | None:intergenic |
| CAACATTTCTAATCATTTAC+TGG | 0.236880 | tig0018755:+7528 | Msa1369070:CDS |
| TTCTAATATGTTGCTTGTTT+TGG | 0.256165 | tig0018755:-4943 | None:intergenic |
| ACAAGTTTCTTAAAGGATTC+AGG | 0.263856 | tig0018755:-4990 | None:intergenic |
| CTTAGTCCACATAAGTTTCT+TGG | 0.265340 | tig0018755:+6327 | Msa1369070:CDS |
| CATGAAGCGGCTTGCCTCTC+TGG | 0.274510 | tig0018755:-6973 | None:intergenic |
| ATCATTCAAATCTACTTTCT+TGG | 0.276230 | tig0018755:+5935 | Msa1369070:CDS |
| TGGTCGATTAGTATCTTTAT+AGG | 0.276407 | tig0018755:-6043 | None:intergenic |
| TACGCTGATCACACTGCTTC+TGG | 0.312202 | tig0018755:+5128 | Msa1369070:CDS |
| TCACCTTCACTCATGTAATA+AGG | 0.322294 | tig0018755:-7364 | None:intergenic |
| CTCACTGTTTGGATTATTTG+AGG | 0.323804 | tig0018755:-6698 | None:intergenic |
| CTAACGATGCTCTCACTGTT+TGG | 0.339477 | tig0018755:-6709 | None:intergenic |
| TCTGCTTGTAGTAATGTAAC+TGG | 0.341389 | tig0018755:+6081 | Msa1369070:CDS |
| GAGGCTACTAGCAATATATT+TGG | 0.341891 | tig0018755:-7623 | None:intergenic |
| TGGCCACATCTAAATAAGTT+TGG | 0.352505 | tig0018755:-7603 | None:intergenic |
| CTTTAAGAAACTTGTGGAAA+TGG | 0.357233 | tig0018755:+4998 | Msa1369070:CDS |
| TTTCCCAAAATCTTGATGTT+GGG | 0.363233 | tig0018755:-6824 | None:intergenic |
| AAAAGTACTCCCGGAGAATC+AGG | 0.364713 | tig0018755:-6354 | None:intergenic |
| TTAATTTGTGGCAAGAAATA+GGG | 0.366674 | tig0018755:+6948 | Msa1369070:CDS |
| ATCAATTGATGAGCAAGAAT+TGG | 0.366969 | tig0018755:-6897 | None:intergenic |
| GCAGAGTTTGATTCTCCATT+TGG | 0.368437 | tig0018755:+5089 | Msa1369070:CDS |
| TGATGAAGGGTTGCTTGATA+TGG | 0.373761 | tig0018755:+5996 | Msa1369070:CDS |
| ATCCTTTCTCTAAGAATAGA+AGG | 0.374094 | tig0018755:-5856 | None:intergenic |
| GGGAATATTGCAGGAAGAAA+TGG | 0.375317 | tig0018755:+7663 | Msa1369070:CDS |
| CTCGAGCTTGAATGCCAAAA+AGG | 0.376314 | tig0018755:-7024 | None:intergenic |
| GATACTAATCGACCATTGTT+AGG | 0.382968 | tig0018755:+6051 | Msa1369070:CDS |
| CAGAGAGGCAAGCCGCTTCA+TGG | 0.383600 | tig0018755:+6974 | Msa1369070:CDS |
| ACTTTCTTGGAGGCAGAGTT+TGG | 0.384563 | tig0018755:+5948 | Msa1369070:CDS |
| TTGGCAGAGGTTGTAGAGAT+TGG | 0.397077 | tig0018755:+5967 | Msa1369070:CDS |
| GTGGAGATTGACATGGGATC+AGG | 0.397505 | tig0018755:+6276 | Msa1369070:CDS |
| TCTTGGTGGTCCTGATTCTC+CGG | 0.398856 | tig0018755:+6344 | Msa1369070:CDS |
| TCCACCTCAGGGAATATTGC+AGG | 0.399399 | tig0018755:+7654 | Msa1369070:CDS |
| ATTCCCTGAGGTGGAAACTT+AGG | 0.403632 | tig0018755:-7646 | None:intergenic |
| TCACTGTTTGGATTATTTGA+GGG | 0.410256 | tig0018755:-6697 | None:intergenic |
| CGAGGAGGGTGTGCTTGTGC+TGG | 0.414961 | tig0018755:+7043 | Msa1369070:CDS |
| TTAAGCAATGCTGCAACAAA+AGG | 0.418637 | tig0018755:-6998 | None:intergenic |
| TATATAGAGGAAAGAACCTT+TGG | 0.422238 | tig0018755:-7432 | None:intergenic |
| GTTTCCCAAAATCTTGATGT+TGG | 0.425618 | tig0018755:-6825 | None:intergenic |
| AAAAGACTTCAAGAAGTAAT+GGG | 0.426268 | tig0018755:+5823 | Msa1369070:CDS |
| ACTTCCATTCCTCAAGTTGA+AGG | 0.427444 | tig0018755:-7455 | None:intergenic |
| CAAGTTTCTTAAAGGATTCA+GGG | 0.428525 | tig0018755:-4989 | None:intergenic |
| CAAAAGACTTCAAGAAGTAA+TGG | 0.430568 | tig0018755:+5822 | Msa1369070:CDS |
| ATGGGATCAGGGAGGAATGA+TGG | 0.431082 | tig0018755:+6288 | Msa1369070:CDS |
| TCCGCCTCCACAAGTGGATG+GGG | 0.435075 | tig0018755:-6412 | None:intergenic |
| ACATAGAAGAGAGGGAAAAT+GGG | 0.439075 | tig0018755:+6669 | Msa1369070:CDS |
| CCTCCCTAAGTTTCCACCTC+AGG | 0.441495 | tig0018755:+7642 | Msa1369070:CDS |
| GCAATCATCTTCTGTGGCTC+AGG | 0.443522 | tig0018755:+5784 | Msa1369070:CDS |
| CTTGGTGGTCCTGATTCTCC+GGG | 0.449267 | tig0018755:+6345 | Msa1369070:CDS |
| TTTGTTTAGTGGTCCGTATG+TGG | 0.459507 | tig0018755:+6257 | Msa1369070:intron |
| TTCCCTGAGGTGGAAACTTA+GGG | 0.463100 | tig0018755:-7645 | None:intergenic |
| GAGATTGGCTTAGATGATGA+AGG | 0.464045 | tig0018755:+5982 | Msa1369070:CDS |
| TCCTCCACAGTTTCATTACA+AGG | 0.464641 | tig0018755:-5026 | None:intergenic |
| AACTCTAAAGTAGAGGATAG+TGG | 0.466387 | tig0018755:-7689 | None:intergenic |
| GCCTTAGCAAAGAAGAAAGA+TGG | 0.468675 | tig0018755:+5887 | Msa1369070:CDS |
| TGCCTTCTATTCTTAGAGAA+AGG | 0.468738 | tig0018755:+5854 | Msa1369070:CDS |
| TTCCGCCTCCACAAGTGGAT+GGG | 0.469410 | tig0018755:-6413 | None:intergenic |
| TGTCAATGCATTCGATGAAA+AGG | 0.469733 | tig0018755:+6446 | Msa1369070:CDS |
| CCCATCTTTCTTCTTTGCTA+AGG | 0.470399 | tig0018755:-5888 | None:intergenic |
| CACTGTTTGGATTATTTGAG+GGG | 0.470973 | tig0018755:-6696 | None:intergenic |
| CTCAAGTTGAAGGTATATAG+AGG | 0.487801 | tig0018755:-7445 | None:intergenic |
| TCAACTTGAGGAATGGAAGT+TGG | 0.488378 | tig0018755:+7458 | Msa1369070:CDS |
| TTCCCAAAATCTTGATGTTG+GGG | 0.488915 | tig0018755:-6823 | None:intergenic |
| TTGGAGGCAGAGTTTGGCAG+AGG | 0.492636 | tig0018755:+5954 | Msa1369070:CDS |
| TCATACTTGCGACAGTTATG+TGG | 0.493076 | tig0018755:+5687 | Msa1369070:CDS |
| CTCTATATACCTTCAACTTG+AGG | 0.494203 | tig0018755:+7446 | Msa1369070:CDS |
| GAGTACATTAAGAAATGCTT+AGG | 0.500122 | tig0018755:+5745 | Msa1369070:CDS |
| CAAGAAACTTATGTGGACTA+AGG | 0.500580 | tig0018755:-6326 | None:intergenic |
| ATTCAAATCTACTTTCTTGG+AGG | 0.501194 | tig0018755:+5938 | Msa1369070:CDS |
| TGTGCTTGTGCTGGACCTTA+CGG | 0.504318 | tig0018755:+7052 | Msa1369070:CDS |
| CTCCCTAAGTTTCCACCTCA+GGG | 0.505226 | tig0018755:+7643 | Msa1369070:CDS |
| GACAGTTCCGCCTCCACAAG+TGG | 0.505419 | tig0018755:-6418 | None:intergenic |
| ACTCTAAAGTAGAGGATAGT+GGG | 0.508430 | tig0018755:-7688 | None:intergenic |
| GGCTATATCGGAGTAAAACC+TGG | 0.510918 | tig0018755:+7322 | Msa1369070:CDS |
| TGGGATCAGGGAGGAATGAT+GGG | 0.513684 | tig0018755:+6289 | Msa1369070:CDS |
| GTTCCGCCTCCACAAGTGGA+TGG | 0.514497 | tig0018755:-6414 | None:intergenic |
| TGAATCCTTTAAGAAACTTG+TGG | 0.516307 | tig0018755:+4992 | Msa1369070:CDS |
| CAAAATCTTGATGTTGGGGT+TGG | 0.516688 | tig0018755:-6819 | None:intergenic |
| TGGTTGCGGTCTCAAATCAT+AGG | 0.522944 | tig0018755:+5059 | Msa1369070:CDS |
| AAACTAACTCTTGTCCATCC+AGG | 0.525967 | tig0018755:-7340 | None:intergenic |
| TGAAGTGACGTACCATAGAA+AGG | 0.527586 | tig0018755:-5197 | None:intergenic |
| AGTCCACATAAGTTTCTTGG+TGG | 0.530242 | tig0018755:+6330 | Msa1369070:CDS |
| AATGAAGACTGAGAAATTTG+AGG | 0.532113 | tig0018755:+7483 | Msa1369070:CDS |
| AACATTTCTAATCATTTACT+GGG | 0.533000 | tig0018755:+7529 | Msa1369070:CDS |
| TCCTGCAATATTCCCTGAGG+TGG | 0.536985 | tig0018755:-7655 | None:intergenic |
| CATGGAGAACATAGAAGAGA+GGG | 0.537066 | tig0018755:+6661 | Msa1369070:CDS |
| AGCTTTGAAGCTGCAACTTG+AGG | 0.539004 | tig0018755:+6020 | Msa1369070:CDS |
| TGGAGATTGACATGGGATCA+GGG | 0.548198 | tig0018755:+6277 | Msa1369070:CDS |
| ATTAAGAAATGCTTAGGTGG+TGG | 0.549911 | tig0018755:+5751 | Msa1369070:CDS |
| TTTCCTTATTACATGAGTGA+AGG | 0.550089 | tig0018755:+7361 | Msa1369070:CDS |
| TAGATTTGAATGATGCTCAT+GGG | 0.551631 | tig0018755:-5926 | None:intergenic |
| AGATTGGCTTAGATGATGAA+GGG | 0.558204 | tig0018755:+5983 | Msa1369070:CDS |
| TAAGCAATGCTGCAACAAAA+GGG | 0.561644 | tig0018755:-6997 | None:intergenic |
| TATACCTTCAACTTGAGGAA+TGG | 0.562439 | tig0018755:+7451 | Msa1369070:CDS |
| TTGTTCATCAAAAGTACTCC+CGG | 0.569129 | tig0018755:-6363 | None:intergenic |
| TGATGAACAATGCTTTGTAT+CGG | 0.569506 | tig0018755:+6376 | Msa1369070:CDS |
| TTGGCATTCAAGCTCGAGGA+GGG | 0.569666 | tig0018755:+7029 | Msa1369070:CDS |
| GAACCAAACTTATTTAGATG+TGG | 0.572778 | tig0018755:+7600 | Msa1369070:CDS |
| TTGAGTAATTCGTGTCCGTA+AGG | 0.573220 | tig0018755:-7067 | None:intergenic |
| GTAGATTTGAATGATGCTCA+TGG | 0.576542 | tig0018755:-5927 | None:intergenic |
| AGTTGTAGCCAAGAACATGA+AGG | 0.580235 | tig0018755:+6920 | Msa1369070:CDS |
| AATGATGCAATCATCTTCTG+TGG | 0.582378 | tig0018755:+5778 | Msa1369070:CDS |
| GAAATTTGAGGCAGTAAACA+AGG | 0.585681 | tig0018755:+7495 | Msa1369070:CDS |
| CCCATGTCAATCTCCACATA+CGG | 0.591025 | tig0018755:-6270 | None:intergenic |
| CCTTAGCAAAGAAGAAAGAT+GGG | 0.592823 | tig0018755:+5888 | Msa1369070:CDS |
| TGAGAGTATAGCTTGTCGCT+TGG | 0.598417 | tig0018755:-6855 | None:intergenic |
| TACATTAAGAAATGCTTAGG+TGG | 0.598713 | tig0018755:+5748 | Msa1369070:CDS |
| GTTGTAGCCAAGAACATGAA+GGG | 0.601267 | tig0018755:+6921 | Msa1369070:CDS |
| GGACCACCAAGAAACTTATG+TGG | 0.601552 | tig0018755:-6333 | None:intergenic |
| ATATCGGAGTAAAACCTGGA+TGG | 0.602940 | tig0018755:+7326 | Msa1369070:CDS |
| AATGTAGGACACATTATACA+TGG | 0.608096 | tig0018755:+6643 | Msa1369070:intron |
| TATCAGATCAGCTGTTCAAG+AGG | 0.608116 | tig0018755:+7114 | Msa1369070:CDS |
| CATAGAAGAGAGGGAAAATG+GGG | 0.611369 | tig0018755:+6670 | Msa1369070:CDS |
| GCAACAAAAGGGCCATGAAG+CGG | 0.613749 | tig0018755:-6986 | None:intergenic |
| TCTTCCTGCAATATTCCCTG+AGG | 0.621603 | tig0018755:-7658 | None:intergenic |
| AATAAACATTGATGTTGATG+TGG | 0.627365 | tig0018755:+7567 | Msa1369070:CDS |
| CATACTTGCGACAGTTATGT+GGG | 0.627569 | tig0018755:+5688 | Msa1369070:CDS |
| AAATTCAAACTCTAAAGTAG+AGG | 0.632298 | tig0018755:-7696 | None:intergenic |
| ACATGGAGAACATAGAAGAG+AGG | 0.633521 | tig0018755:+6660 | Msa1369070:CDS |
| CCGCCTCCACAAGTGGATGG+GGG | 0.634171 | tig0018755:-6411 | None:intergenic |
| ATTAGCTCAAAGTCAGAACA+AGG | 0.639611 | tig0018755:+4893 | Msa1369070:CDS |
| TTGTAGCCAAGAACATGAAG+GGG | 0.640366 | tig0018755:+6922 | Msa1369070:CDS |
| TTTGGCATTCAAGCTCGAGG+AGG | 0.643266 | tig0018755:+7028 | Msa1369070:CDS |
| GCTATGATCTCTGCTAACAA+TGG | 0.646161 | tig0018755:-4867 | None:intergenic |
| AGATTTGAATGATGCTCATG+GGG | 0.647917 | tig0018755:-5925 | None:intergenic |
| ATGTTGATGTGGCTGTGAGA+AGG | 0.654701 | tig0018755:+7578 | Msa1369070:CDS |
| AGAACAACTGTACATTAACA+AGG | 0.663044 | tig0018755:+6778 | Msa1369070:CDS |
| TCCGTATGTGGAGATTGACA+TGG | 0.668606 | tig0018755:+6269 | Msa1369070:CDS |
| TGTAGCCAAGAACATGAAGG+GGG | 0.677946 | tig0018755:+6923 | Msa1369070:CDS |
| GCAGAGAAAGATCCTAACAA+TGG | 0.679049 | tig0018755:-6063 | None:intergenic |
| TAGCAAAGAAGAAAGATGGG+TGG | 0.689815 | tig0018755:+5891 | Msa1369070:CDS |
| CCTGAGGTGGAAACTTAGGG+AGG | 0.697673 | tig0018755:-7642 | None:intergenic |
| CATGCCTTGTAATGAAACTG+TGG | 0.702110 | tig0018755:+5022 | Msa1369070:CDS |
| GCCTTGTAATGAAACTGTGG+AGG | 0.702923 | tig0018755:+5025 | Msa1369070:CDS |
| CCGTATGTGGAGATTGACAT+GGG | 0.708084 | tig0018755:+6270 | Msa1369070:CDS |
| GTAGCCAAGAACATGAAGGG+GGG | 0.736383 | tig0018755:+6924 | Msa1369070:CDS |
| CAAGAAATAGGGAACCAGAG+AGG | 0.736727 | tig0018755:+6959 | Msa1369070:CDS |
| GTTTCTTAAAGGATTCAGGG+TGG | 0.746810 | tig0018755:-4986 | None:intergenic |
| ATAGAAGAGAGGGAAAATGG+GGG | 0.783358 | tig0018755:+6671 | Msa1369070:CDS |
| AGATTGACATGGGATCAGGG+AGG | 0.805610 | tig0018755:+6280 | Msa1369070:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | ATAAAATTTCATTGAATATA+AGG | - | tig0018755:6600-6619 | None:intergenic | 10.0% |
| !! | ATTATTATCATATACTTCAT+GGG | - | tig0018755:5408-5427 | None:intergenic | 15.0% |
| !! | TATTATTATCATATACTTCA+TGG | - | tig0018755:5409-5428 | None:intergenic | 15.0% |
| !! | ATTTAAGCTAAAAAATATCA+AGG | - | tig0018755:7158-7177 | None:intergenic | 15.0% |
| !!! | ACTAAAATTGTTTATTGTTT+TGG | + | tig0018755:7285-7304 | Msa1369070:intron | 15.0% |
| !!! | TTTTATTTGCCTAAAGTTTT+TGG | + | tig0018755:5291-5310 | Msa1369070:intron | 20.0% |
| !!! | TTAATTTGATTTGTCAATTG+TGG | + | tig0018755:6190-6209 | Msa1369070:intron | 20.0% |
| !!! | TTTGATGACATAGTAATTAA+TGG | + | tig0018755:6232-6251 | Msa1369070:intron | 20.0% |
| !!! | GTGAAAGTTTTTTTGTTAAT+CGG | + | tig0018755:6482-6501 | Msa1369070:intron | 20.0% |
| !!! | TTTCTTTTAAATGCTTTGAA+AGG | - | tig0018755:7264-7283 | None:intergenic | 20.0% |
| !! | AACATTTCTAATCATTTACT+GGG | + | tig0018755:7529-7548 | Msa1369070:CDS | 20.0% |
| !!! | TTCTAATATGTTGCTTGTTT+TGG | - | tig0018755:4946-4965 | None:intergenic | 25.0% |
| ! | TATATAATCATAGGCCATAT+TGG | - | tig0018755:5258-5277 | None:intergenic | 25.0% |
| ! | ACACCAAGATATATAATCAT+AGG | - | tig0018755:5267-5286 | None:intergenic | 25.0% |
| !!! | ACACTATATTTGTTGTTCAT+TGG | - | tig0018755:5357-5376 | None:intergenic | 25.0% |
| ! | TCAATTAAGTCTCTCAATAT+TGG | - | tig0018755:5553-5572 | None:intergenic | 25.0% |
| !!! | ATTTTTTCCATCAACCTAAA+TGG | - | tig0018755:5591-5610 | None:intergenic | 25.0% |
| !!! | TCTTTTAGCTTTGTTATTCT+TGG | + | tig0018755:5653-5672 | Msa1369070:intron | 25.0% |
| ! | AAAAGACTTCAAGAAGTAAT+GGG | + | tig0018755:5823-5842 | Msa1369070:CDS | 25.0% |
| ! | ATCATTCAAATCTACTTTCT+TGG | + | tig0018755:5935-5954 | Msa1369070:CDS | 25.0% |
| !!! | ATGCTTTTTCACAAATACAA+AGG | + | tig0018755:6132-6151 | Msa1369070:CDS | 25.0% |
| !!! | AATTAATGGCTTTTGTTTAG+TGG | + | tig0018755:6246-6265 | Msa1369070:intron | 25.0% |
| !!! | TTAAATTAAAAGTACTCCCT+AGG | - | tig0018755:6560-6579 | None:intergenic | 25.0% |
| !!! | TTAATTTGTGGCAAGAAATA+GGG | + | tig0018755:6948-6967 | Msa1369070:CDS | 25.0% |
| !! | ATTTTTACTCTATGTACTCA+TGG | + | tig0018755:7211-7230 | Msa1369070:intron | 25.0% |
| !!! | GTTTATTGTTTTGGATCTTT+TGG | + | tig0018755:7294-7313 | Msa1369070:intron | 25.0% |
| !!! | ATAGAGTTTTTAGCTGTATA+TGG | + | tig0018755:7409-7428 | Msa1369070:CDS | 25.0% |
| ! | CAACATTTCTAATCATTTAC+TGG | + | tig0018755:7528-7547 | Msa1369070:CDS | 25.0% |
| ! | AATAAACATTGATGTTGATG+TGG | + | tig0018755:7567-7586 | Msa1369070:CDS | 25.0% |
| !!! | TTGTTTTGGATAAAGGTACA+TGG | - | tig0018755:4932-4951 | None:intergenic | 30.0% |
| !!! | ATGTTGCTTGTTTTGGATAA+AGG | - | tig0018755:4939-4958 | None:intergenic | 30.0% |
| CAAGTTTCTTAAAGGATTCA+GGG | - | tig0018755:4992-5011 | None:intergenic | 30.0% | |
| ACAAGTTTCTTAAAGGATTC+AGG | - | tig0018755:4993-5012 | None:intergenic | 30.0% | |
| ! | TGAATCCTTTAAGAAACTTG+TGG | + | tig0018755:4992-5011 | Msa1369070:CDS | 30.0% |
| CATTTCCACAAGTTTCTTAA+AGG | - | tig0018755:5000-5019 | None:intergenic | 30.0% | |
| ! | CTTTAAGAAACTTGTGGAAA+TGG | + | tig0018755:4998-5017 | Msa1369070:CDS | 30.0% |
| AATCATCTTCTTCCTTTCTA+TGG | + | tig0018755:5185-5204 | Msa1369070:CDS | 30.0% | |
| CTCTACAATATATGCCAATA+TGG | + | tig0018755:5241-5260 | Msa1369070:intron | 30.0% | |
| TGGCCTATGATTATATATCT+TGG | + | tig0018755:5261-5280 | Msa1369070:intron | 30.0% | |
| !! | TTATTAGAGGAAGTTTTGGT+TGG | - | tig0018755:5526-5545 | None:intergenic | 30.0% |
| ! | TCTCTTATTAGAGGAAGTTT+TGG | - | tig0018755:5530-5549 | None:intergenic | 30.0% |
| ! | CAATATTGGTCTCTTATTAG+AGG | - | tig0018755:5539-5558 | None:intergenic | 30.0% |
| GAGTACATTAAGAAATGCTT+AGG | + | tig0018755:5745-5764 | Msa1369070:CDS | 30.0% | |
| TACATTAAGAAATGCTTAGG+TGG | + | tig0018755:5748-5767 | Msa1369070:CDS | 30.0% | |
| ! | TACTTCTTGAAGTCTTTTGA+TGG | - | tig0018755:5821-5840 | None:intergenic | 30.0% |
| CAAAAGACTTCAAGAAGTAA+TGG | + | tig0018755:5822-5841 | Msa1369070:CDS | 30.0% | |
| ! | ATCCTTTCTCTAAGAATAGA+AGG | - | tig0018755:5859-5878 | None:intergenic | 30.0% |
| TAGATTTGAATGATGCTCAT+GGG | - | tig0018755:5929-5948 | None:intergenic | 30.0% | |
| ATTCAAATCTACTTTCTTGG+AGG | + | tig0018755:5938-5957 | Msa1369070:CDS | 30.0% | |
| TGGTCGATTAGTATCTTTAT+AGG | - | tig0018755:6046-6065 | None:intergenic | 30.0% | |
| TGATGAACAATGCTTTGTAT+CGG | + | tig0018755:6376-6395 | Msa1369070:CDS | 30.0% | |
| AACACTGAGAAACTTTCTTT+AGG | - | tig0018755:6508-6527 | None:intergenic | 30.0% | |
| ! | TTTCTCAGTGTTGTTGATTA+GGG | + | tig0018755:6516-6535 | Msa1369070:intron | 30.0% |
| ! | TATGTGATTTTATGCAACCT+AGG | + | tig0018755:6540-6559 | Msa1369070:intron | 30.0% |
| ! | ATGTGATTTTATGCAACCTA+GGG | + | tig0018755:6541-6560 | Msa1369070:intron | 30.0% |
| TCATTGAATATAAGGTGAAG+AGG | - | tig0018755:6592-6611 | None:intergenic | 30.0% | |
| TTCATATGTGTGATCAATGT+AGG | + | tig0018755:6628-6647 | Msa1369070:intron | 30.0% | |
| AATGTAGGACACATTATACA+TGG | + | tig0018755:6643-6662 | Msa1369070:intron | 30.0% | |
| TCACTGTTTGGATTATTTGA+GGG | - | tig0018755:6700-6719 | None:intergenic | 30.0% | |
| !!! | TTTTGGGTTAAAGAGTACAT+TGG | + | tig0018755:6734-6753 | Msa1369070:CDS | 30.0% |
| AGAACAACTGTACATTAACA+AGG | + | tig0018755:6778-6797 | Msa1369070:CDS | 30.0% | |
| TTTCCCAAAATCTTGATGTT+GGG | - | tig0018755:6827-6846 | None:intergenic | 30.0% | |
| ATCAATTGATGAGCAAGAAT+TGG | - | tig0018755:6900-6919 | None:intergenic | 30.0% | |
| !! | CTTAATTTGTGGCAAGAAAT+AGG | + | tig0018755:6947-6966 | Msa1369070:CDS | 30.0% |
| !! | CATGCAGTTTTGTAATTTGT+AGG | - | tig0018755:7239-7258 | None:intergenic | 30.0% |
| CTACAAATTACAAAACTGCA+TGG | + | tig0018755:7237-7256 | Msa1369070:intron | 30.0% | |
| TTTCCTTATTACATGAGTGA+AGG | + | tig0018755:7361-7380 | Msa1369070:CDS | 30.0% | |
| TATATAGAGGAAAGAACCTT+TGG | - | tig0018755:7435-7454 | None:intergenic | 30.0% | |
| AATGAAGACTGAGAAATTTG+AGG | + | tig0018755:7483-7502 | Msa1369070:CDS | 30.0% | |
| GAACCAAACTTATTTAGATG+TGG | + | tig0018755:7600-7619 | Msa1369070:CDS | 30.0% | |
| ATTAGCTCAAAGTCAGAACA+AGG | + | tig0018755:4893-4912 | Msa1369070:CDS | 35.0% | |
| ! | ACAAGTTTTCGTCTTCCAAA+TGG | - | tig0018755:5107-5126 | None:intergenic | 35.0% |
| TATAGCGCTCCAAAAACTTT+AGG | - | tig0018755:5303-5322 | None:intergenic | 35.0% | |
| ! | TTTGGTTGGTCACAACTATT+TGG | - | tig0018755:5512-5531 | None:intergenic | 35.0% |
| GATTTGCAACCAAACCATTT+AGG | + | tig0018755:5574-5593 | Msa1369070:intron | 35.0% | |
| !! | AACCAAACCATTTAGGTTGA+TGG | + | tig0018755:5581-5600 | Msa1369070:intron | 35.0% |
| TTCCATCAACCTAAATGGTT+TGG | - | tig0018755:5586-5605 | None:intergenic | 35.0% | |
| !! | TAGCTTTGTTATTCTTGGAC+AGG | + | tig0018755:5658-5677 | Msa1369070:intron | 35.0% |
| !! | AGCTTTGTTATTCTTGGACA+GGG | + | tig0018755:5659-5678 | Msa1369070:intron | 35.0% |
| ATTAAGAAATGCTTAGGTGG+TGG | + | tig0018755:5751-5770 | Msa1369070:CDS | 35.0% | |
| AATGATGCAATCATCTTCTG+TGG | + | tig0018755:5778-5797 | Msa1369070:CDS | 35.0% | |
| TGCCTTCTATTCTTAGAGAA+AGG | + | tig0018755:5854-5873 | Msa1369070:CDS | 35.0% | |
| CCTTAGCAAAGAAGAAAGAT+GGG | + | tig0018755:5888-5907 | Msa1369070:CDS | 35.0% | |
| AGATTTGAATGATGCTCATG+GGG | - | tig0018755:5928-5947 | None:intergenic | 35.0% | |
| GTAGATTTGAATGATGCTCA+TGG | - | tig0018755:5930-5949 | None:intergenic | 35.0% | |
| !! | AGATTGGCTTAGATGATGAA+GGG | + | tig0018755:5983-6002 | Msa1369070:CDS | 35.0% |
| GATACTAATCGACCATTGTT+AGG | + | tig0018755:6051-6070 | Msa1369070:CDS | 35.0% | |
| TCTGCTTGTAGTAATGTAAC+TGG | + | tig0018755:6081-6100 | Msa1369070:CDS | 35.0% | |
| !!! | CATGTTTTGATTTTGCAGCA+AGG | + | tig0018755:6160-6179 | Msa1369070:CDS | 35.0% |
| ! | CAAGAAACTTATGTGGACTA+AGG | - | tig0018755:6329-6348 | None:intergenic | 35.0% |
| CTTAGTCCACATAAGTTTCT+TGG | + | tig0018755:6327-6346 | Msa1369070:CDS | 35.0% | |
| !! | TTGTTCATCAAAAGTACTCC+CGG | - | tig0018755:6366-6385 | None:intergenic | 35.0% |
| TGTCAATGCATTCGATGAAA+AGG | + | tig0018755:6446-6465 | Msa1369070:CDS | 35.0% | |
| ! | GTTTCTCAGTGTTGTTGATT+AGG | + | tig0018755:6515-6534 | Msa1369070:intron | 35.0% |
| AACATAGAAGAGAGGGAAAA+TGG | + | tig0018755:6668-6687 | Msa1369070:CDS | 35.0% | |
| ACATAGAAGAGAGGGAAAAT+GGG | + | tig0018755:6669-6688 | Msa1369070:CDS | 35.0% | |
| CACTGTTTGGATTATTTGAG+GGG | - | tig0018755:6699-6718 | None:intergenic | 35.0% | |
| CTCACTGTTTGGATTATTTG+AGG | - | tig0018755:6701-6720 | None:intergenic | 35.0% | |
| ! | AACCCCAACATCAAGATTTT+GGG | + | tig0018755:6821-6840 | Msa1369070:CDS | 35.0% |
| TTCCCAAAATCTTGATGTTG+GGG | - | tig0018755:6826-6845 | None:intergenic | 35.0% | |
| GTTTCCCAAAATCTTGATGT+TGG | - | tig0018755:6828-6847 | None:intergenic | 35.0% | |
| TAAGCAATGCTGCAACAAAA+GGG | - | tig0018755:7000-7019 | None:intergenic | 35.0% | |
| TTAAGCAATGCTGCAACAAA+AGG | - | tig0018755:7001-7020 | None:intergenic | 35.0% | |
| ! | GCATTGCTTAATGACCTTTT+TGG | + | tig0018755:7010-7029 | Msa1369070:CDS | 35.0% |
| !! | TGTTTTGGATCTTTTGGTAC+AGG | + | tig0018755:7300-7319 | Msa1369070:intron | 35.0% |
| !! | GTTTTGGATCTTTTGGTACA+GGG | + | tig0018755:7301-7320 | Msa1369070:intron | 35.0% |
| TCACCTTCACTCATGTAATA+AGG | - | tig0018755:7367-7386 | None:intergenic | 35.0% | |
| !! | TTTTAGCTGTATATGGCCAA+AGG | + | tig0018755:7416-7435 | Msa1369070:CDS | 35.0% |
| !! | CTCAAGTTGAAGGTATATAG+AGG | - | tig0018755:7448-7467 | None:intergenic | 35.0% |
| CTCTATATACCTTCAACTTG+AGG | + | tig0018755:7446-7465 | Msa1369070:CDS | 35.0% | |
| TATACCTTCAACTTGAGGAA+TGG | + | tig0018755:7451-7470 | Msa1369070:CDS | 35.0% | |
| ! | GAAATTTGAGGCAGTAAACA+AGG | + | tig0018755:7495-7514 | Msa1369070:CDS | 35.0% |
| TGGCCACATCTAAATAAGTT+TGG | - | tig0018755:7606-7625 | None:intergenic | 35.0% | |
| GAGGCTACTAGCAATATATT+TGG | - | tig0018755:7626-7645 | None:intergenic | 35.0% | |
| !! | ACTCTAAAGTAGAGGATAGT+GGG | - | tig0018755:7691-7710 | None:intergenic | 35.0% |
| !! | AACTCTAAAGTAGAGGATAG+TGG | - | tig0018755:7692-7711 | None:intergenic | 35.0% |
| GCTATGATCTCTGCTAACAA+TGG | - | tig0018755:4870-4889 | None:intergenic | 40.0% | |
| AGTCAGAACAAGGCCAAAAA+TGG | + | tig0018755:4903-4922 | Msa1369070:CDS | 40.0% | |
| GTCAGAACAAGGCCAAAAAT+GGG | + | tig0018755:4904-4923 | Msa1369070:CDS | 40.0% | |
| TCAGAACAAGGCCAAAAATG+GGG | + | tig0018755:4905-4924 | Msa1369070:CDS | 40.0% | |
| GTTTCTTAAAGGATTCAGGG+TGG | - | tig0018755:4989-5008 | None:intergenic | 40.0% | |
| CATGCCTTGTAATGAAACTG+TGG | + | tig0018755:5022-5041 | Msa1369070:CDS | 40.0% | |
| TCCTCCACAGTTTCATTACA+AGG | - | tig0018755:5029-5048 | None:intergenic | 40.0% | |
| !! | AGGAAAAACTGTGTTGGTTG+CGG | + | tig0018755:5045-5064 | Msa1369070:CDS | 40.0% |
| GCAGAGTTTGATTCTCCATT+TGG | + | tig0018755:5089-5108 | Msa1369070:CDS | 40.0% | |
| TGAAGTGACGTACCATAGAA+AGG | - | tig0018755:5200-5219 | None:intergenic | 40.0% | |
| TCATACTTGCGACAGTTATG+TGG | + | tig0018755:5687-5706 | Msa1369070:CDS | 40.0% | |
| CATACTTGCGACAGTTATGT+GGG | + | tig0018755:5688-5707 | Msa1369070:CDS | 40.0% | |
| GCCTTAGCAAAGAAGAAAGA+TGG | + | tig0018755:5887-5906 | Msa1369070:CDS | 40.0% | |
| CCCATCTTTCTTCTTTGCTA+AGG | - | tig0018755:5891-5910 | None:intergenic | 40.0% | |
| TAGCAAAGAAGAAAGATGGG+TGG | + | tig0018755:5891-5910 | Msa1369070:CDS | 40.0% | |
| ! | GAAAGATGGGTGGTTTTTGT+AGG | + | tig0018755:5901-5920 | Msa1369070:CDS | 40.0% |
| !! | GAGATTGGCTTAGATGATGA+AGG | + | tig0018755:5982-6001 | Msa1369070:CDS | 40.0% |
| TGATGAAGGGTTGCTTGATA+TGG | + | tig0018755:5996-6015 | Msa1369070:CDS | 40.0% | |
| GCAGAGAAAGATCCTAACAA+TGG | - | tig0018755:6066-6085 | None:intergenic | 40.0% | |
| TTTGTTTAGTGGTCCGTATG+TGG | + | tig0018755:6257-6276 | Msa1369070:intron | 40.0% | |
| AGTCCACATAAGTTTCTTGG+TGG | + | tig0018755:6330-6349 | Msa1369070:CDS | 40.0% | |
| ACATGGAGAACATAGAAGAG+AGG | + | tig0018755:6660-6679 | Msa1369070:CDS | 40.0% | |
| CATGGAGAACATAGAAGAGA+GGG | + | tig0018755:6661-6680 | Msa1369070:CDS | 40.0% | |
| CATAGAAGAGAGGGAAAATG+GGG | + | tig0018755:6670-6689 | Msa1369070:CDS | 40.0% | |
| ATAGAAGAGAGGGAAAATGG+GGG | + | tig0018755:6671-6690 | Msa1369070:CDS | 40.0% | |
| !!! | TGAGAGCATCGTTAGCATTT+TGG | + | tig0018755:6717-6736 | Msa1369070:CDS | 40.0% |
| !!! | GAGAGCATCGTTAGCATTTT+GGG | + | tig0018755:6718-6737 | Msa1369070:CDS | 40.0% |
| CAAAATCTTGATGTTGGGGT+TGG | - | tig0018755:6822-6841 | None:intergenic | 40.0% | |
| ! | CAACCCCAACATCAAGATTT+TGG | + | tig0018755:6820-6839 | Msa1369070:CDS | 40.0% |
| AGTTGTAGCCAAGAACATGA+AGG | + | tig0018755:6920-6939 | Msa1369070:CDS | 40.0% | |
| GTTGTAGCCAAGAACATGAA+GGG | + | tig0018755:6921-6940 | Msa1369070:CDS | 40.0% | |
| TTGTAGCCAAGAACATGAAG+GGG | + | tig0018755:6922-6941 | Msa1369070:CDS | 40.0% | |
| TTGAGTAATTCGTGTCCGTA+AGG | - | tig0018755:7070-7089 | None:intergenic | 40.0% | |
| TATCAGATCAGCTGTTCAAG+AGG | + | tig0018755:7114-7133 | Msa1369070:CDS | 40.0% | |
| ! | CTTTTGGTACAGGGCTATAT+CGG | + | tig0018755:7310-7329 | Msa1369070:intron | 40.0% |
| ATATCGGAGTAAAACCTGGA+TGG | + | tig0018755:7326-7345 | Msa1369070:CDS | 40.0% | |
| AAACTAACTCTTGTCCATCC+AGG | - | tig0018755:7343-7362 | None:intergenic | 40.0% | |
| !! | ACTTCCATTCCTCAAGTTGA+AGG | - | tig0018755:7458-7477 | None:intergenic | 40.0% |
| TCAACTTGAGGAATGGAAGT+TGG | + | tig0018755:7458-7477 | Msa1369070:CDS | 40.0% | |
| GGGAATATTGCAGGAAGAAA+TGG | + | tig0018755:7663-7682 | Msa1369070:CDS | 40.0% | |
| ! | AGGTACATGGTCCCCATTTT+TGG | - | tig0018755:4919-4938 | None:intergenic | 45.0% |
| GCCTTGTAATGAAACTGTGG+AGG | + | tig0018755:5025-5044 | Msa1369070:CDS | 45.0% | |
| CTGTGGAGGAAAAACTGTGT+TGG | + | tig0018755:5039-5058 | Msa1369070:CDS | 45.0% | |
| TGGTTGCGGTCTCAAATCAT+AGG | + | tig0018755:5059-5078 | Msa1369070:CDS | 45.0% | |
| ACTTTCTTGGAGGCAGAGTT+TGG | + | tig0018755:5948-5967 | Msa1369070:CDS | 45.0% | |
| TTGGCAGAGGTTGTAGAGAT+TGG | + | tig0018755:5967-5986 | Msa1369070:CDS | 45.0% | |
| !! | AGCTTTGAAGCTGCAACTTG+AGG | + | tig0018755:6020-6039 | Msa1369070:CDS | 45.0% |
| TCCGTATGTGGAGATTGACA+TGG | + | tig0018755:6269-6288 | Msa1369070:CDS | 45.0% | |
| CCCATGTCAATCTCCACATA+CGG | - | tig0018755:6273-6292 | None:intergenic | 45.0% | |
| CCGTATGTGGAGATTGACAT+GGG | + | tig0018755:6270-6289 | Msa1369070:CDS | 45.0% | |
| TGGAGATTGACATGGGATCA+GGG | + | tig0018755:6277-6296 | Msa1369070:CDS | 45.0% | |
| GGACCACCAAGAAACTTATG+TGG | - | tig0018755:6336-6355 | None:intergenic | 45.0% | |
| !! | AAAAGTACTCCCGGAGAATC+AGG | - | tig0018755:6357-6376 | None:intergenic | 45.0% |
| CTAACGATGCTCTCACTGTT+TGG | - | tig0018755:6712-6731 | None:intergenic | 45.0% | |
| ! | TGAGAGTATAGCTTGTCGCT+TGG | - | tig0018755:6858-6877 | None:intergenic | 45.0% |
| TGTAGCCAAGAACATGAAGG+GGG | + | tig0018755:6923-6942 | Msa1369070:CDS | 45.0% | |
| ! | ATGAAGGGGGGCTTAATTTG+TGG | + | tig0018755:6936-6955 | Msa1369070:CDS | 45.0% |
| CAAGAAATAGGGAACCAGAG+AGG | + | tig0018755:6959-6978 | Msa1369070:CDS | 45.0% | |
| CTCGAGCTTGAATGCCAAAA+AGG | - | tig0018755:7027-7046 | None:intergenic | 45.0% | |
| !! | CTTTTTGGCATTCAAGCTCG+AGG | + | tig0018755:7025-7044 | Msa1369070:CDS | 45.0% |
| GGCTATATCGGAGTAAAACC+TGG | + | tig0018755:7322-7341 | Msa1369070:CDS | 45.0% | |
| ATGTTGATGTGGCTGTGAGA+AGG | + | tig0018755:7578-7597 | Msa1369070:CDS | 45.0% | |
| TTCCCTGAGGTGGAAACTTA+GGG | - | tig0018755:7648-7667 | None:intergenic | 45.0% | |
| ATTCCCTGAGGTGGAAACTT+AGG | - | tig0018755:7649-7668 | None:intergenic | 45.0% | |
| TCTTCCTGCAATATTCCCTG+AGG | - | tig0018755:7661-7680 | None:intergenic | 45.0% | |
| TACGCTGATCACACTGCTTC+TGG | + | tig0018755:5128-5147 | Msa1369070:CDS | 50.0% | |
| GCAATCATCTTCTGTGGCTC+AGG | + | tig0018755:5784-5803 | Msa1369070:CDS | 50.0% | |
| GTGGAGATTGACATGGGATC+AGG | + | tig0018755:6276-6295 | Msa1369070:CDS | 50.0% | |
| AGATTGACATGGGATCAGGG+AGG | + | tig0018755:6280-6299 | Msa1369070:CDS | 50.0% | |
| ATGGGATCAGGGAGGAATGA+TGG | + | tig0018755:6288-6307 | Msa1369070:CDS | 50.0% | |
| TGGGATCAGGGAGGAATGAT+GGG | + | tig0018755:6289-6308 | Msa1369070:CDS | 50.0% | |
| ! | TCTTGGTGGTCCTGATTCTC+CGG | + | tig0018755:6344-6363 | Msa1369070:CDS | 50.0% |
| GTAGCCAAGAACATGAAGGG+GGG | + | tig0018755:6924-6943 | Msa1369070:CDS | 50.0% | |
| TAAGCCCCCCTTCATGTTCT+TGG | - | tig0018755:6931-6950 | None:intergenic | 50.0% | |
| GCAACAAAAGGGCCATGAAG+CGG | - | tig0018755:6989-7008 | None:intergenic | 50.0% | |
| TTTGGCATTCAAGCTCGAGG+AGG | + | tig0018755:7028-7047 | Msa1369070:CDS | 50.0% | |
| TTGGCATTCAAGCTCGAGGA+GGG | + | tig0018755:7029-7048 | Msa1369070:CDS | 50.0% | |
| TGTGCTTGTGCTGGACCTTA+CGG | + | tig0018755:7052-7071 | Msa1369070:CDS | 50.0% | |
| CTCCCTAAGTTTCCACCTCA+GGG | + | tig0018755:7643-7662 | Msa1369070:CDS | 50.0% | |
| TCCACCTCAGGGAATATTGC+AGG | + | tig0018755:7654-7673 | Msa1369070:CDS | 50.0% | |
| TCCTGCAATATTCCCTGAGG+TGG | - | tig0018755:7658-7677 | None:intergenic | 50.0% | |
| TTGGAGGCAGAGTTTGGCAG+AGG | + | tig0018755:5954-5973 | Msa1369070:CDS | 55.0% | |
| ! | CTTGGTGGTCCTGATTCTCC+GGG | + | tig0018755:6345-6364 | Msa1369070:CDS | 55.0% |
| TTCCGCCTCCACAAGTGGAT+GGG | - | tig0018755:6416-6435 | None:intergenic | 55.0% | |
| CCTGAGGTGGAAACTTAGGG+AGG | - | tig0018755:7645-7664 | None:intergenic | 55.0% | |
| CCTCCCTAAGTTTCCACCTC+AGG | + | tig0018755:7642-7661 | Msa1369070:CDS | 55.0% | |
| TCTTCGCCCCCATCCACTTG+TGG | + | tig0018755:6405-6424 | Msa1369070:CDS | 60.0% | |
| TCCGCCTCCACAAGTGGATG+GGG | - | tig0018755:6415-6434 | None:intergenic | 60.0% | |
| GTTCCGCCTCCACAAGTGGA+TGG | - | tig0018755:6417-6436 | None:intergenic | 60.0% | |
| GACAGTTCCGCCTCCACAAG+TGG | - | tig0018755:6421-6440 | None:intergenic | 60.0% | |
| CATGAAGCGGCTTGCCTCTC+TGG | - | tig0018755:6976-6995 | None:intergenic | 60.0% | |
| CAGAGAGGCAAGCCGCTTCA+TGG | + | tig0018755:6974-6993 | Msa1369070:CDS | 60.0% | |
| TCGCCCCCATCCACTTGTGG+AGG | + | tig0018755:6408-6427 | Msa1369070:CDS | 65.0% | |
| CCGCCTCCACAAGTGGATGG+GGG | - | tig0018755:6414-6433 | None:intergenic | 65.0% | |
| CCCCCATCCACTTGTGGAGG+CGG | + | tig0018755:6411-6430 | Msa1369070:CDS | 65.0% | |
| ! | CGAGGAGGGTGTGCTTGTGC+TGG | + | tig0018755:7043-7062 | Msa1369070:CDS | 65.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| tig0018755 | gene | 4852 | 7714 | 4852 | ID=Msa1369070;Name=Msa1369070 |
| tig0018755 | mRNA | 4852 | 7714 | 4852 | ID=Msa1369070-mRNA-1;Parent=Msa1369070;Name=Msa1369070-mRNA-1;_AED=0.18;_eAED=0.18;_QI=0|0|0|1|1|1|5|0|645 |
| tig0018755 | exon | 4852 | 5206 | 4852 | ID=Msa1369070-mRNA-1:exon:914;Parent=Msa1369070-mRNA-1 |
| tig0018755 | exon | 5680 | 6181 | 5680 | ID=Msa1369070-mRNA-1:exon:915;Parent=Msa1369070-mRNA-1 |
| tig0018755 | exon | 6266 | 6467 | 6266 | ID=Msa1369070-mRNA-1:exon:916;Parent=Msa1369070-mRNA-1 |
| tig0018755 | exon | 6650 | 7135 | 6650 | ID=Msa1369070-mRNA-1:exon:917;Parent=Msa1369070-mRNA-1 |
| tig0018755 | exon | 7322 | 7714 | 7322 | ID=Msa1369070-mRNA-1:exon:918;Parent=Msa1369070-mRNA-1 |
| tig0018755 | CDS | 4852 | 5206 | 4852 | ID=Msa1369070-mRNA-1:cds;Parent=Msa1369070-mRNA-1 |
| tig0018755 | CDS | 5680 | 6181 | 5680 | ID=Msa1369070-mRNA-1:cds;Parent=Msa1369070-mRNA-1 |
| tig0018755 | CDS | 6266 | 6467 | 6266 | ID=Msa1369070-mRNA-1:cds;Parent=Msa1369070-mRNA-1 |
| tig0018755 | CDS | 6650 | 7135 | 6650 | ID=Msa1369070-mRNA-1:cds;Parent=Msa1369070-mRNA-1 |
| tig0018755 | CDS | 7322 | 7714 | 7322 | ID=Msa1369070-mRNA-1:cds;Parent=Msa1369070-mRNA-1 |
| Gene Sequence |
| Protein sequence |
