Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1369710 | KEH44316.1 | 96.813 | 251 | 8 | 0 | 1 | 251 | 1 | 251 | 1.27e-180 | 506 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1369710 | A0A072VRL9 | 96.813 | 251 | 8 | 0 | 1 | 251 | 1 | 251 | 0.0 | 506 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0044110 | Msa1369710 | 0.803671 | 3.118898e-49 | -8.615850e-47 |
| Msa1369710 | Msa1460390 | 0.843806 | 1.116881e-58 | -8.615850e-47 |
| Msa1369710 | Msa1465010 | 0.901267 | 3.183681e-78 | -8.615850e-47 |
| Msa0183740 | Msa1369710 | 0.900913 | 4.549056e-78 | -8.615850e-47 |
| Msa0243600 | Msa1369710 | 0.804752 | 1.857503e-49 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1369710 | MtrunA17_Chr1g0210731 | 96.813 | 251 | 8 | 0 | 1 | 251 | 55 | 305 | 0.0 | 504 |
| Msa1369710 | MtrunA17_Chr1g0210721 | 67.470 | 249 | 69 | 5 | 1 | 246 | 56 | 295 | 1.66e-111 | 322 |
| Msa1369710 | MtrunA17_Chr2g0287431 | 56.967 | 244 | 98 | 6 | 8 | 249 | 63 | 301 | 6.22e-85 | 256 |
| Msa1369710 | MtrunA17_Chr4g0033971 | 34.184 | 196 | 121 | 3 | 34 | 222 | 84 | 278 | 3.26e-34 | 124 |
| Msa1369710 | MtrunA17_Chr8g0369411 | 33.690 | 187 | 118 | 3 | 26 | 212 | 82 | 262 | 2.32e-26 | 103 |
| Msa1369710 | MtrunA17_Chr5g0409571 | 29.612 | 206 | 133 | 5 | 27 | 232 | 83 | 276 | 6.45e-24 | 97.1 |
| Msa1369710 | MtrunA17_Chr7g0227861 | 32.335 | 167 | 111 | 2 | 71 | 235 | 100 | 266 | 2.66e-20 | 87.8 |
| Msa1369710 | MtrunA17_Chr8g0369401 | 33.333 | 138 | 87 | 3 | 75 | 212 | 32 | 164 | 2.02e-16 | 74.7 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1369710 | AT1G55230.1 | 57.143 | 238 | 100 | 2 | 1 | 238 | 56 | 291 | 5.18e-94 | 278 |
| Msa1369710 | AT1G55240.1 | 55.462 | 238 | 105 | 1 | 1 | 238 | 56 | 292 | 8.23e-90 | 268 |
| Msa1369710 | AT5G19870.1 | 54.206 | 214 | 96 | 1 | 10 | 223 | 65 | 276 | 2.01e-85 | 256 |
| Msa1369710 | AT1G49470.1 | 33.663 | 202 | 119 | 3 | 36 | 227 | 83 | 279 | 1.84e-29 | 112 |
| Msa1369710 | AT1G32127.2 | 34.000 | 150 | 95 | 3 | 26 | 175 | 82 | 227 | 4.15e-21 | 89.7 |
| Msa1369710 | AT1G32127.1 | 34.000 | 150 | 95 | 3 | 26 | 175 | 82 | 227 | 4.15e-21 | 89.7 |
| Msa1369710 | AT3G01360.2 | 28.161 | 174 | 122 | 2 | 41 | 211 | 95 | 268 | 9.82e-16 | 75.9 |
| Msa1369710 | AT3G01360.1 | 28.161 | 174 | 122 | 2 | 41 | 211 | 95 | 268 | 9.82e-16 | 75.9 |
Find 51 sgRNAs with CRISPR-Local
Find 116 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| GCTTGCCTGTGGTGATCTTT+TGG | 0.244017 | tig0018891:-30984 | None:intergenic |
| AGGTTTGTGGCTTATGTTCA+TGG | 0.293266 | tig0018891:+30675 | Msa1369710:CDS |
| CAATTCAGCTGGTTCTTGAT+TGG | 0.309654 | tig0018891:+30823 | Msa1369710:CDS |
| CTTACAACCCTTATGGGAAT+TGG | 0.312435 | tig0018891:+30598 | Msa1369710:CDS |
| GAAGGAATGGTACCATCATT+AGG | 0.341448 | tig0018891:-30334 | None:intergenic |
| TCAAAACTTGCAGTAAATAA+TGG | 0.355405 | tig0018891:-30561 | None:intergenic |
| AAATGAAATTACTCATTTGC+TGG | 0.360728 | tig0018891:+30462 | Msa1369710:CDS |
| TGTGTCCTTCTACTTGATTA+TGG | 0.364513 | tig0018891:+30861 | Msa1369710:CDS |
| TGGTTATCCAATGAGCTTCT+TGG | 0.366591 | tig0018891:+30618 | Msa1369710:CDS |
| TTGATTATGGCTGTAAGTTA+TGG | 0.394009 | tig0018891:+30874 | Msa1369710:CDS |
| TGGATAACCAATTCCCATAA+GGG | 0.413010 | tig0018891:-30605 | None:intergenic |
| CAAGTTATTCAGATTTGCTC+TGG | 0.427300 | tig0018891:-31006 | None:intergenic |
| AGAGATCACATGGGTATAGA+AGG | 0.434296 | tig0018891:+30532 | Msa1369710:CDS |
| TTGGATAACCAATTCCCATA+AGG | 0.437321 | tig0018891:-30606 | None:intergenic |
| GCATAACCTTCCAAGGTTTG+TGG | 0.438782 | tig0018891:+30662 | Msa1369710:CDS |
| TACAGCCATAATCAAGTAGA+AGG | 0.441076 | tig0018891:-30866 | None:intergenic |
| GGTTTGTGGCTTATGTTCAT+GGG | 0.442596 | tig0018891:+30676 | Msa1369710:CDS |
| AAACTCACCAAGAAGCTCAT+TGG | 0.454952 | tig0018891:-30625 | None:intergenic |
| TGGTGAATCTTCAATTCAGC+TGG | 0.455765 | tig0018891:+30812 | Msa1369710:CDS |
| CAACTTTGAACACTCTTCCA+TGG | 0.473299 | tig0018891:+30369 | Msa1369710:CDS |
| AAGGAATGGTACCATCATTA+GGG | 0.479670 | tig0018891:-30333 | None:intergenic |
| GTACCATCATTAGGGTCAAA+TGG | 0.486202 | tig0018891:-30325 | None:intergenic |
| CAACCTTTCGGTTCAAAACC+AGG | 0.497142 | tig0018891:-30715 | None:intergenic |
| AGTTTCGTAAAGCAACCTTT+CGG | 0.505192 | tig0018891:-30727 | None:intergenic |
| GTGGAGATGGTTGGAAGGAA+TGG | 0.517817 | tig0018891:-30347 | None:intergenic |
| TGAACATAAGCCACAAACCT+TGG | 0.521512 | tig0018891:-30672 | None:intergenic |
| TCTGTTAGCATAACCTTCCA+AGG | 0.527914 | tig0018891:+30655 | Msa1369710:CDS |
| AGTGTTCAAAGTTGTGGAGA+TGG | 0.532689 | tig0018891:-30360 | None:intergenic |
| GAGGAACATTATCGTGAAGA+TGG | 0.535159 | tig0018891:+30931 | Msa1369710:CDS |
| TGGAAGAGTGTTCAAAGTTG+TGG | 0.544369 | tig0018891:-30366 | None:intergenic |
| TTCAAAGTTGTGGAGATGGT+TGG | 0.544658 | tig0018891:-30356 | None:intergenic |
| CAACCATTTGACCCTAATGA+TGG | 0.545080 | tig0018891:+30322 | Msa1369710:CDS |
| TGTTAAGTGCAGTGATGAAA+AGG | 0.547706 | tig0018891:+30768 | Msa1369710:CDS |
| CATAAGCCACAAACCTTGGA+AGG | 0.549282 | tig0018891:-30668 | None:intergenic |
| TCTTCATCGTGCTGTAGCGT+TGG | 0.552622 | tig0018891:+30792 | Msa1369710:CDS |
| TAGGGTCAAATGGTTGGTGA+TGG | 0.562396 | tig0018891:-30315 | None:intergenic |
| GTTTGTGGCTTATGTTCATG+GGG | 0.570855 | tig0018891:+30677 | Msa1369710:CDS |
| TCTTCATTCAAGAGATCACA+TGG | 0.573103 | tig0018891:+30522 | Msa1369710:CDS |
| CATCATTAGGGTCAAATGGT+TGG | 0.575638 | tig0018891:-30321 | None:intergenic |
| GATTTGCTCTGGCTTGCCTG+TGG | 0.582887 | tig0018891:-30995 | None:intergenic |
| GTATGTTTCACTGATGATGA+AGG | 0.586326 | tig0018891:+30909 | Msa1369710:CDS |
| AAGTTGTGGAGATGGTTGGA+AGG | 0.588161 | tig0018891:-30352 | None:intergenic |
| CAATGCCAAAAGATCACCAC+AGG | 0.593405 | tig0018891:+30979 | Msa1369710:CDS |
| GACTAAGAAAGACAAAGCCA+TGG | 0.596145 | tig0018891:-30386 | None:intergenic |
| GGTTGCTTTACGAAACTAGA+GGG | 0.605869 | tig0018891:+30733 | Msa1369710:CDS |
| TCAAATGGTTGGTGATGGAG+AGG | 0.619042 | tig0018891:-30310 | None:intergenic |
| AGGAGCTATGAAGAGTTCCA+TGG | 0.640804 | tig0018891:-30290 | None:intergenic |
| AAATTGTTGTGCAAATGCAA+TGG | 0.654608 | tig0018891:-30488 | None:intergenic |
| TGTTTCACTGATGATGAAGG+AGG | 0.670252 | tig0018891:+30912 | Msa1369710:CDS |
| AGGTTGCTTTACGAAACTAG+AGG | 0.685393 | tig0018891:+30732 | Msa1369710:CDS |
| CTTCATTCAAGAGATCACAT+GGG | 0.751652 | tig0018891:+30523 | Msa1369710:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | TGATTTTCTATCAAGAATTA+TGG | - | tig0018891:30425-30444 | None:intergenic | 20.0% |
| !!! | TGATTTTCTATCAAGAATTA+TGG | - | tig0018891:30425-30444 | None:intergenic | 20.0% |
| ! | AAATGAAATTACTCATTTGC+TGG | + | tig0018891:30462-30481 | Msa1369710:CDS | 25.0% |
| ! | TCAAAACTTGCAGTAAATAA+TGG | - | tig0018891:30564-30583 | None:intergenic | 25.0% |
| ! | AAATGAAATTACTCATTTGC+TGG | + | tig0018891:30462-30481 | Msa1369710:CDS | 25.0% |
| ! | TCAAAACTTGCAGTAAATAA+TGG | - | tig0018891:30564-30583 | None:intergenic | 25.0% |
| ! | TTGCATTATTTTCATAGCCA+TGG | + | tig0018891:30273-30292 | Msa1369710:CDS | 30.0% |
| AAATTGTTGTGCAAATGCAA+TGG | - | tig0018891:30491-30510 | None:intergenic | 30.0% | |
| ! | TTGTTTTCTTACAACCCTTA+TGG | + | tig0018891:30591-30610 | Msa1369710:CDS | 30.0% |
| ! | TGTTTTCTTACAACCCTTAT+GGG | + | tig0018891:30592-30611 | Msa1369710:CDS | 30.0% |
| TTGATTATGGCTGTAAGTTA+TGG | + | tig0018891:30874-30893 | Msa1369710:CDS | 30.0% | |
| ! | TTGCATTATTTTCATAGCCA+TGG | + | tig0018891:30273-30292 | Msa1369710:CDS | 30.0% |
| AAATTGTTGTGCAAATGCAA+TGG | - | tig0018891:30491-30510 | None:intergenic | 30.0% | |
| ! | TTGTTTTCTTACAACCCTTA+TGG | + | tig0018891:30591-30610 | Msa1369710:CDS | 30.0% |
| ! | TGTTTTCTTACAACCCTTAT+GGG | + | tig0018891:30592-30611 | Msa1369710:CDS | 30.0% |
| TTGATTATGGCTGTAAGTTA+TGG | + | tig0018891:30874-30893 | Msa1369710:CDS | 30.0% | |
| AAGGAATGGTACCATCATTA+GGG | - | tig0018891:30336-30355 | None:intergenic | 35.0% | |
| TCTTCATTCAAGAGATCACA+TGG | + | tig0018891:30522-30541 | Msa1369710:CDS | 35.0% | |
| CTTCATTCAAGAGATCACAT+GGG | + | tig0018891:30523-30542 | Msa1369710:CDS | 35.0% | |
| TGGATAACCAATTCCCATAA+GGG | - | tig0018891:30608-30627 | None:intergenic | 35.0% | |
| TTGGATAACCAATTCCCATA+AGG | - | tig0018891:30609-30628 | None:intergenic | 35.0% | |
| AGTTTCGTAAAGCAACCTTT+CGG | - | tig0018891:30730-30749 | None:intergenic | 35.0% | |
| TGTTAAGTGCAGTGATGAAA+AGG | + | tig0018891:30768-30787 | Msa1369710:CDS | 35.0% | |
| TGTGTCCTTCTACTTGATTA+TGG | + | tig0018891:30861-30880 | Msa1369710:CDS | 35.0% | |
| TACAGCCATAATCAAGTAGA+AGG | - | tig0018891:30869-30888 | None:intergenic | 35.0% | |
| ! | GTATGTTTCACTGATGATGA+AGG | + | tig0018891:30909-30928 | Msa1369710:CDS | 35.0% |
| AAGGAATGGTACCATCATTA+GGG | - | tig0018891:30336-30355 | None:intergenic | 35.0% | |
| TCTTCATTCAAGAGATCACA+TGG | + | tig0018891:30522-30541 | Msa1369710:CDS | 35.0% | |
| CTTCATTCAAGAGATCACAT+GGG | + | tig0018891:30523-30542 | Msa1369710:CDS | 35.0% | |
| TGGATAACCAATTCCCATAA+GGG | - | tig0018891:30608-30627 | None:intergenic | 35.0% | |
| TTGGATAACCAATTCCCATA+AGG | - | tig0018891:30609-30628 | None:intergenic | 35.0% | |
| AGTTTCGTAAAGCAACCTTT+CGG | - | tig0018891:30730-30749 | None:intergenic | 35.0% | |
| TGTTAAGTGCAGTGATGAAA+AGG | + | tig0018891:30768-30787 | Msa1369710:CDS | 35.0% | |
| TGTGTCCTTCTACTTGATTA+TGG | + | tig0018891:30861-30880 | Msa1369710:CDS | 35.0% | |
| TACAGCCATAATCAAGTAGA+AGG | - | tig0018891:30869-30888 | None:intergenic | 35.0% | |
| ! | GTATGTTTCACTGATGATGA+AGG | + | tig0018891:30909-30928 | Msa1369710:CDS | 35.0% |
| CATCATTAGGGTCAAATGGT+TGG | - | tig0018891:30324-30343 | None:intergenic | 40.0% | |
| CAACCATTTGACCCTAATGA+TGG | + | tig0018891:30322-30341 | Msa1369710:CDS | 40.0% | |
| GTACCATCATTAGGGTCAAA+TGG | - | tig0018891:30328-30347 | None:intergenic | 40.0% | |
| GAAGGAATGGTACCATCATT+AGG | - | tig0018891:30337-30356 | None:intergenic | 40.0% | |
| TTCAAAGTTGTGGAGATGGT+TGG | - | tig0018891:30359-30378 | None:intergenic | 40.0% | |
| AGTGTTCAAAGTTGTGGAGA+TGG | - | tig0018891:30363-30382 | None:intergenic | 40.0% | |
| !! | TGGAAGAGTGTTCAAAGTTG+TGG | - | tig0018891:30369-30388 | None:intergenic | 40.0% |
| CAACTTTGAACACTCTTCCA+TGG | + | tig0018891:30369-30388 | Msa1369710:CDS | 40.0% | |
| GACTAAGAAAGACAAAGCCA+TGG | - | tig0018891:30389-30408 | None:intergenic | 40.0% | |
| AGAGATCACATGGGTATAGA+AGG | + | tig0018891:30532-30551 | Msa1369710:CDS | 40.0% | |
| CTTACAACCCTTATGGGAAT+TGG | + | tig0018891:30598-30617 | Msa1369710:CDS | 40.0% | |
| TGGTTATCCAATGAGCTTCT+TGG | + | tig0018891:30618-30637 | Msa1369710:CDS | 40.0% | |
| AAACTCACCAAGAAGCTCAT+TGG | - | tig0018891:30628-30647 | None:intergenic | 40.0% | |
| TCTGTTAGCATAACCTTCCA+AGG | + | tig0018891:30655-30674 | Msa1369710:CDS | 40.0% | |
| TGAACATAAGCCACAAACCT+TGG | - | tig0018891:30675-30694 | None:intergenic | 40.0% | |
| AGGTTTGTGGCTTATGTTCA+TGG | + | tig0018891:30675-30694 | Msa1369710:CDS | 40.0% | |
| GGTTTGTGGCTTATGTTCAT+GGG | + | tig0018891:30676-30695 | Msa1369710:CDS | 40.0% | |
| GTTTGTGGCTTATGTTCATG+GGG | + | tig0018891:30677-30696 | Msa1369710:CDS | 40.0% | |
| ! | AGGTTGCTTTACGAAACTAG+AGG | + | tig0018891:30732-30751 | Msa1369710:CDS | 40.0% |
| ! | GGTTGCTTTACGAAACTAGA+GGG | + | tig0018891:30733-30752 | Msa1369710:CDS | 40.0% |
| TGGTGAATCTTCAATTCAGC+TGG | + | tig0018891:30812-30831 | Msa1369710:CDS | 40.0% | |
| ! | CAATTCAGCTGGTTCTTGAT+TGG | + | tig0018891:30823-30842 | Msa1369710:CDS | 40.0% |
| ! | TGTTTCACTGATGATGAAGG+AGG | + | tig0018891:30912-30931 | Msa1369710:CDS | 40.0% |
| GAGGAACATTATCGTGAAGA+TGG | + | tig0018891:30931-30950 | Msa1369710:CDS | 40.0% | |
| ! | TGTGGTGATCTTTTGGCATT+GGG | - | tig0018891:30980-30999 | None:intergenic | 40.0% |
| CATCATTAGGGTCAAATGGT+TGG | - | tig0018891:30324-30343 | None:intergenic | 40.0% | |
| CAACCATTTGACCCTAATGA+TGG | + | tig0018891:30322-30341 | Msa1369710:CDS | 40.0% | |
| GTACCATCATTAGGGTCAAA+TGG | - | tig0018891:30328-30347 | None:intergenic | 40.0% | |
| GAAGGAATGGTACCATCATT+AGG | - | tig0018891:30337-30356 | None:intergenic | 40.0% | |
| TTCAAAGTTGTGGAGATGGT+TGG | - | tig0018891:30359-30378 | None:intergenic | 40.0% | |
| AGTGTTCAAAGTTGTGGAGA+TGG | - | tig0018891:30363-30382 | None:intergenic | 40.0% | |
| !! | TGGAAGAGTGTTCAAAGTTG+TGG | - | tig0018891:30369-30388 | None:intergenic | 40.0% |
| CAACTTTGAACACTCTTCCA+TGG | + | tig0018891:30369-30388 | Msa1369710:CDS | 40.0% | |
| GACTAAGAAAGACAAAGCCA+TGG | - | tig0018891:30389-30408 | None:intergenic | 40.0% | |
| AGAGATCACATGGGTATAGA+AGG | + | tig0018891:30532-30551 | Msa1369710:CDS | 40.0% | |
| CTTACAACCCTTATGGGAAT+TGG | + | tig0018891:30598-30617 | Msa1369710:CDS | 40.0% | |
| TGGTTATCCAATGAGCTTCT+TGG | + | tig0018891:30618-30637 | Msa1369710:CDS | 40.0% | |
| AAACTCACCAAGAAGCTCAT+TGG | - | tig0018891:30628-30647 | None:intergenic | 40.0% | |
| TCTGTTAGCATAACCTTCCA+AGG | + | tig0018891:30655-30674 | Msa1369710:CDS | 40.0% | |
| TGAACATAAGCCACAAACCT+TGG | - | tig0018891:30675-30694 | None:intergenic | 40.0% | |
| AGGTTTGTGGCTTATGTTCA+TGG | + | tig0018891:30675-30694 | Msa1369710:CDS | 40.0% | |
| GGTTTGTGGCTTATGTTCAT+GGG | + | tig0018891:30676-30695 | Msa1369710:CDS | 40.0% | |
| GTTTGTGGCTTATGTTCATG+GGG | + | tig0018891:30677-30696 | Msa1369710:CDS | 40.0% | |
| ! | AGGTTGCTTTACGAAACTAG+AGG | + | tig0018891:30732-30751 | Msa1369710:CDS | 40.0% |
| ! | GGTTGCTTTACGAAACTAGA+GGG | + | tig0018891:30733-30752 | Msa1369710:CDS | 40.0% |
| TGGTGAATCTTCAATTCAGC+TGG | + | tig0018891:30812-30831 | Msa1369710:CDS | 40.0% | |
| ! | CAATTCAGCTGGTTCTTGAT+TGG | + | tig0018891:30823-30842 | Msa1369710:CDS | 40.0% |
| ! | TGTTTCACTGATGATGAAGG+AGG | + | tig0018891:30912-30931 | Msa1369710:CDS | 40.0% |
| GAGGAACATTATCGTGAAGA+TGG | + | tig0018891:30931-30950 | Msa1369710:CDS | 40.0% | |
| ! | TGTGGTGATCTTTTGGCATT+GGG | - | tig0018891:30980-30999 | None:intergenic | 40.0% |
| AGGAGCTATGAAGAGTTCCA+TGG | - | tig0018891:30293-30312 | None:intergenic | 45.0% | |
| !! | TCAAATGGTTGGTGATGGAG+AGG | - | tig0018891:30313-30332 | None:intergenic | 45.0% |
| !! | TAGGGTCAAATGGTTGGTGA+TGG | - | tig0018891:30318-30337 | None:intergenic | 45.0% |
| AAGTTGTGGAGATGGTTGGA+AGG | - | tig0018891:30355-30374 | None:intergenic | 45.0% | |
| GCATAACCTTCCAAGGTTTG+TGG | + | tig0018891:30662-30681 | Msa1369710:CDS | 45.0% | |
| CATAAGCCACAAACCTTGGA+AGG | - | tig0018891:30671-30690 | None:intergenic | 45.0% | |
| !!! | ACACCTGGTTTTGAACCGAA+AGG | + | tig0018891:30712-30731 | Msa1369710:CDS | 45.0% |
| CAACCTTTCGGTTCAAAACC+AGG | - | tig0018891:30718-30737 | None:intergenic | 45.0% | |
| ! | CTGTGGTGATCTTTTGGCAT+TGG | - | tig0018891:30981-31000 | None:intergenic | 45.0% |
| CAATGCCAAAAGATCACCAC+AGG | + | tig0018891:30979-30998 | Msa1369710:CDS | 45.0% | |
| AGGAGCTATGAAGAGTTCCA+TGG | - | tig0018891:30293-30312 | None:intergenic | 45.0% | |
| !! | TCAAATGGTTGGTGATGGAG+AGG | - | tig0018891:30313-30332 | None:intergenic | 45.0% |
| !! | TAGGGTCAAATGGTTGGTGA+TGG | - | tig0018891:30318-30337 | None:intergenic | 45.0% |
| AAGTTGTGGAGATGGTTGGA+AGG | - | tig0018891:30355-30374 | None:intergenic | 45.0% | |
| GCATAACCTTCCAAGGTTTG+TGG | + | tig0018891:30662-30681 | Msa1369710:CDS | 45.0% | |
| CATAAGCCACAAACCTTGGA+AGG | - | tig0018891:30671-30690 | None:intergenic | 45.0% | |
| !!! | ACACCTGGTTTTGAACCGAA+AGG | + | tig0018891:30712-30731 | Msa1369710:CDS | 45.0% |
| CAACCTTTCGGTTCAAAACC+AGG | - | tig0018891:30718-30737 | None:intergenic | 45.0% | |
| ! | CTGTGGTGATCTTTTGGCAT+TGG | - | tig0018891:30981-31000 | None:intergenic | 45.0% |
| CAATGCCAAAAGATCACCAC+AGG | + | tig0018891:30979-30998 | Msa1369710:CDS | 45.0% | |
| GTGGAGATGGTTGGAAGGAA+TGG | - | tig0018891:30350-30369 | None:intergenic | 50.0% | |
| !! | GGGCTCATGCTTTTTACACC+TGG | + | tig0018891:30697-30716 | Msa1369710:CDS | 50.0% |
| TCTTCATCGTGCTGTAGCGT+TGG | + | tig0018891:30792-30811 | Msa1369710:CDS | 50.0% | |
| ! | GCTTGCCTGTGGTGATCTTT+TGG | - | tig0018891:30987-31006 | None:intergenic | 50.0% |
| GTGGAGATGGTTGGAAGGAA+TGG | - | tig0018891:30350-30369 | None:intergenic | 50.0% | |
| !! | GGGCTCATGCTTTTTACACC+TGG | + | tig0018891:30697-30716 | Msa1369710:CDS | 50.0% |
| TCTTCATCGTGCTGTAGCGT+TGG | + | tig0018891:30792-30811 | Msa1369710:CDS | 50.0% | |
| ! | GCTTGCCTGTGGTGATCTTT+TGG | - | tig0018891:30987-31006 | None:intergenic | 50.0% |
| ! | GATTTGCTCTGGCTTGCCTG+TGG | - | tig0018891:30998-31017 | None:intergenic | 55.0% |
| ! | GATTTGCTCTGGCTTGCCTG+TGG | - | tig0018891:30998-31017 | None:intergenic | 55.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| tig0018891 | gene | 30265 | 31020 | 30265 | ID=Msa1369710;Name=Msa1369710 |
| tig0018891 | mRNA | 30265 | 31020 | 30265 | ID=Msa1369710-mRNA-1;Parent=Msa1369710;Name=Msa1369710-mRNA-1;_AED=0.30;_eAED=0.30;_QI=0|-1|0|1|-1|1|1|0|251 |
| tig0018891 | exon | 30265 | 31020 | 30265 | ID=Msa1369710-mRNA-1:exon:1313;Parent=Msa1369710-mRNA-1 |
| tig0018891 | CDS | 30265 | 31020 | 30265 | ID=Msa1369710-mRNA-1:cds;Parent=Msa1369710-mRNA-1 |
| Gene Sequence |
| Protein sequence |
