AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa1374770

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa1374770 MtrunA17_Chr3g0136911 95.157 1239 9 1 1 1239 1 1188 0.0 2431
Msa1374770 MtrunA17_Chr8g0375171 92.084 1238 44 3 2 1239 3 1186 0.0 2351
Msa1374770 MtrunA17_Chr1g0155911 33.979 1239 672 32 53 1237 36 1182 0.0 640
Msa1374770 MtrunA17_Chr3g0142441 94.257 296 17 0 613 908 2 297 0.0 578
Msa1374770 MtrunA17_Chr3g0142431 95.510 245 11 0 995 1239 1 245 1.00e-164 489
Msa1374770 MtrunA17_Chr8g0345421 28.664 1235 703 34 53 1237 24 1130 2.51e-130 428
Msa1374770 MtrunA17_Chr4g0069391 28.586 983 572 34 338 1235 258 1195 1.11e-87 310
Msa1374770 MtrunA17_Chr3g0142451 91.176 102 9 0 483 584 1 102 2.14e-60 201
Msa1374770 MtrunA17_Chr3g0142471 81.250 96 18 0 131 226 6 101 2.91e-48 168
Msa1374770 MtrunA17_Chr3g0142481 76.812 69 11 2 1 68 1 65 9.77e-29 109
Msa1374770 MtrunA17_Chr4g0016641 25.714 455 259 14 825 1232 636 1058 3.44e-28 123
Msa1374770 MtrunA17_CPg0493041 25.714 455 259 14 825 1232 636 1058 3.44e-28 123
Msa1374770 MtrunA17_Chr3g0142461 74.138 58 14 1 305 361 1 58 3.33e-21 88.2
Msa1374770 MtrunA17_Chr1g0159041 24.579 297 180 10 764 1059 61 314 1.68e-15 79.3
Msa1374770 MtrunA17_Chr1g0154941 25.000 180 97 6 53 226 23 170 1.36e-12 67.8
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa1374770 AT3G23780.1 64.843 1243 344 14 17 1239 3 1172 0.0 1610
Msa1374770 AT3G23780.2 64.843 1243 344 14 17 1239 3 1172 0.0 1610
Msa1374770 AT3G18090.1 65.419 1122 301 10 136 1239 3 1055 0.0 1482
Msa1374770 AT3G18090.2 62.148 959 276 10 136 1076 3 892 0.0 1187
Msa1374770 AT3G18090.3 62.238 956 274 10 136 1073 3 889 0.0 1186
Msa1374770 AT4G21710.1 34.113 1240 669 33 53 1237 33 1179 0.0 634
Msa1374770 AT5G45140.2 29.476 1279 702 39 19 1230 7 1152 1.23e-137 449
Msa1374770 AT5G45140.1 29.476 1279 702 39 19 1230 7 1152 1.23e-137 449
Msa1374770 AT1G29940.1 27.365 983 582 28 338 1235 234 1169 3.63e-82 294
Msa1374770 AT5G45140.3 27.158 869 473 29 53 878 39 790 8.33e-65 237
Msa1374770 ATCG00190.1 25.376 465 288 13 767 1186 577 1027 4.21e-27 120

Find 332 sgRNAs with CRISPR-Local

Find 536 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
CCTGAAGACATTGTTAATTT+TGG 0.067293 tig0019570:+110475 Msa1374770:CDS
AAAGCATCAACTCTTATATT+TGG 0.127597 tig0019570:-110169 None:intergenic
ACCACTTTGTGGTACATTTA+TGG 0.162808 tig0019570:-106856 None:intergenic
CTTGATATGTCATTCTTATT+AGG 0.167440 tig0019570:+110040 Msa1374770:CDS
CGGAGGCTACTTTCTGATTA+AGG 0.193770 tig0019570:+106526 Msa1374770:CDS
TGGTCAAAATTGCAGAAATT+TGG 0.199962 tig0019570:+106875 Msa1374770:CDS
GGTCCGATCGCTGATATTTA+TGG 0.227588 tig0019570:+111867 Msa1374770:CDS
TGTCGGGTCAGCGGGTGAAC+TGG 0.228681 tig0019570:-111955 None:intergenic
AAATAGGATGGTTGTTAAAT+TGG 0.238146 tig0019570:+107220 Msa1374770:CDS
CCAAAGTCTGAATTCTATAA+TGG 0.247666 tig0019570:+110289 Msa1374770:CDS
TTGAAGTCCTCTTCTTCTTC+AGG 0.252661 tig0019570:-109947 None:intergenic
AAAAGGATGGAAAGGATTTC+TGG 0.253506 tig0019570:+107878 Msa1374770:CDS
CCTCTGCAACCTGGCATGTC+TGG 0.253652 tig0019570:-106063 None:intergenic
AGTAATCTGCTCAAGATTAA+AGG 0.253696 tig0019570:+109860 Msa1374770:CDS
CGTTATGCTACGGTTAAGTT+TGG 0.257432 tig0019570:+105972 Msa1374770:CDS
TTGGAGACCATTTGTAATAA+TGG 0.265166 tig0019570:-107819 None:intergenic
GGAAAGATACAGAGTAAAAT+TGG 0.269746 tig0019570:+110496 Msa1374770:CDS
GCCCTGCAGAGAGACCTTTA+TGG 0.273489 tig0019570:+107755 Msa1374770:CDS
TACATTGATAAAGATATTAA+AGG 0.273662 tig0019570:+106401 Msa1374770:CDS
GCATGGACAGAAGGGTGTTT+TGG 0.274857 tig0019570:+111014 Msa1374770:CDS
GAAAAGAAGCTTAAGCTTAA+AGG 0.278424 tig0019570:+105585 Msa1374770:five_prime_UTR
TACAATCAATTCATCAATTC+TGG 0.294934 tig0019570:+105864 Msa1374770:CDS
CAAAGCTGAAATTGAGAATA+AGG 0.300709 tig0019570:+110429 Msa1374770:CDS
TCTGGTGTGGTTGCAACTCT+TGG 0.303936 tig0019570:+107896 Msa1374770:CDS
TTCTTAGAGGAACGTGTAAA+AGG 0.305968 tig0019570:+107482 Msa1374770:CDS
GGGTTTCAAATATTCCATAC+TGG 0.306856 tig0019570:+107168 Msa1374770:CDS
CGCTTGAGCGACCTAAGTTT+TGG 0.310792 tig0019570:+106003 Msa1374770:CDS
TACAAAAGCAGTATTGTCTA+TGG 0.311952 tig0019570:-106915 None:intergenic
CTCCAGTAGAAAACGCTCTT+TGG 0.314169 tig0019570:-107838 None:intergenic
TGATGATACTACAACTGTTC+TGG 0.316293 tig0019570:+108820 Msa1374770:CDS
ATCAAACAGCTGAGGAAGTA+TGG 0.318968 tig0019570:-108777 None:intergenic
TAGCCTGAGAAGAATGCTTC+TGG 0.321084 tig0019570:-110126 None:intergenic
TCATCAGCACCTTTCTTAGA+AGG 0.322385 tig0019570:-105942 None:intergenic
GGTCAAAATTGCAGAAATTT+GGG 0.323125 tig0019570:+106876 Msa1374770:CDS
GACAATAACTTTGCTCCATA+TGG 0.333966 tig0019570:-112234 None:intergenic
ACCGAGTTCGTTGAGGATTT+CGG 0.334040 tig0019570:-105757 None:intergenic
CGATTTGGAGGTATCAAGTT+TGG 0.336084 tig0019570:+111997 Msa1374770:CDS
TAAATCTTTCCAGTCCCTAT+TGG 0.337687 tig0019570:+109898 Msa1374770:CDS
AAGCATCAACTCTTATATTT+GGG 0.338326 tig0019570:-110168 None:intergenic
CTTGGAAAACCTGGATATCT+TGG 0.343060 tig0019570:+110250 Msa1374770:CDS
TGTGCTTTAGCTTTATACTA+TGG 0.343766 tig0019570:-110618 None:intergenic
CTGAAGCACCATGAGCTATC+AGG 0.344112 tig0019570:-112038 None:intergenic
CCAAAATTAACAATGTCTTC+AGG 0.345264 tig0019570:-110475 None:intergenic
AAAAGAAGCTTAAGCTTAAA+GGG 0.348602 tig0019570:+105586 Msa1374770:five_prime_UTR
AAGCATTCTTCTCAGGCTAT+TGG 0.349703 tig0019570:+110130 Msa1374770:CDS
GACCACGCCGATGTGGTAAA+TGG 0.350558 tig0019570:+106809 Msa1374770:CDS
CAGGTTAGGAGCCCAGTTCT+TGG 0.351963 tig0019570:+110973 Msa1374770:intron
AGTCGCAGATGAAGAGAAAT+AGG 0.352580 tig0019570:+107204 Msa1374770:CDS
CTCCAACCCAGTCCCCATTT+AGG 0.352720 tig0019570:-108862 None:intergenic
TAGCTCTGCCACAAATGATA+TGG 0.355404 tig0019570:-108897 None:intergenic
CCATTACTGACCAGCTTCAT+AGG 0.355712 tig0019570:+111226 Msa1374770:CDS
ATTGTTGATCTCATCGATTA+TGG 0.355906 tig0019570:+107362 Msa1374770:CDS
TGTGGATTTATAACAATATC+AGG 0.355965 tig0019570:-111087 None:intergenic
TTCCAGTCCCTATTGGATAA+TGG 0.357748 tig0019570:+109905 Msa1374770:CDS
CCTGAATTTGACTTTGTCTT+CGG 0.358897 tig0019570:-111923 None:intergenic
GATACGAGGGAAATAACTAT+TGG 0.360774 tig0019570:+106428 Msa1374770:CDS
GATGATGGCTTTCCATTTGT+TGG 0.362742 tig0019570:+110538 Msa1374770:CDS
ATCGGGCGGTGTGCTGATTC+CGG 0.370475 tig0019570:+110589 Msa1374770:CDS
AGATCAGACTTGACCATAAC+AGG 0.371245 tig0019570:-106458 None:intergenic
TGAGTTAGCTGGTGAGCTGC+TGG 0.372168 tig0019570:+107682 Msa1374770:CDS
CAACGAACTCGGTGATGATA+TGG 0.374454 tig0019570:+105767 Msa1374770:CDS
AAAGAAATGCAAGGGCATTC+AGG 0.374525 tig0019570:-112446 None:intergenic
CAATCACGCCATTATCCAAT+AGG 0.374576 tig0019570:-109913 None:intergenic
CAAGGGCATTCAGGCAAATC+AGG 0.378023 tig0019570:-112437 None:intergenic
GGTTTATGGAGAAAGGGTTT+TGG 0.378201 tig0019570:-105619 None:intergenic
GTATATATCAGTTTGGTTCC+TGG 0.379323 tig0019570:+112372 Msa1374770:three_prime_UTR
TGCAAATTTGCTCCAACAAA+TGG 0.379930 tig0019570:-110550 None:intergenic
TGTCATAAATTACTCCTAAC+TGG 0.383412 tig0019570:-112409 None:intergenic
GAGAACTTATCTCCAAGAAC+TGG 0.386193 tig0019570:-110985 None:intergenic
CCGAAGACAAAGTCAAATTC+AGG 0.388621 tig0019570:+111923 Msa1374770:CDS
TGTTCAGATCTGAGCATATA+AGG 0.389042 tig0019570:+110401 Msa1374770:CDS
CGGACATGTGGTGCAGTCTC+TGG 0.392560 tig0019570:-111903 None:intergenic
CGAAGTGATAAGTTTAAGAC+TGG 0.396101 tig0019570:+106368 Msa1374770:CDS
GGAGGCTACTTTCTGATTAA+GGG 0.396161 tig0019570:+106527 Msa1374770:CDS
GTGATCTTGCGACCGGTATC+TGG 0.396475 tig0019570:+112141 Msa1374770:CDS
GTCGCTGACAGGAAGCGATT+TGG 0.397585 tig0019570:+111982 Msa1374770:CDS
TTCCTCAGCTGTTTGATTGT+GGG 0.401843 tig0019570:+108783 Msa1374770:CDS
TTCAGATTCCATATCATTTG+TGG 0.401910 tig0019570:+108889 Msa1374770:CDS
ACCCTTCTGTCCATGCATAC+TGG 0.403623 tig0019570:-111007 None:intergenic
ATAAGTGGAATGCTCATATC+CGG 0.403703 tig0019570:+112490 Msa1374770:three_prime_UTR
TGGGGTGTTCAGTATTTGTT+TGG 0.404123 tig0019570:+109977 Msa1374770:CDS
CTTCCTCAGCTGTTTGATTG+TGG 0.405684 tig0019570:+108782 Msa1374770:CDS
ATTGATTGTACGAGTTGATT+TGG 0.406359 tig0019570:-105851 None:intergenic
TAAATGGTGGTCAATATTGC+AGG 0.408289 tig0019570:+106825 Msa1374770:CDS
ACATTGATAAAGATATTAAA+GGG 0.408591 tig0019570:+106402 Msa1374770:CDS
TTGAAAGCAACAGCCCAGTA+TGG 0.411906 tig0019570:-107182 None:intergenic
TTCGTTGAGGATTTCGGCGT+TGG 0.412731 tig0019570:-105751 None:intergenic
AGAGGACTTCAAGACTGCTT+GGG 0.413762 tig0019570:+109958 Msa1374770:CDS
ATGTTTCCTTGATACCAGTT+AGG 0.415335 tig0019570:+112395 Msa1374770:three_prime_UTR
CAAAGTCTGAATTCTATAAT+GGG 0.419058 tig0019570:+110290 Msa1374770:CDS
CAACACCAACTACACAGAAA+TGG 0.421651 tig0019570:+105698 Msa1374770:CDS
ATTAGGTGTATATATCAGTT+TGG 0.422360 tig0019570:+112365 Msa1374770:three_prime_UTR
CTCCATAAAGGTCTCTCTGC+AGG 0.422980 tig0019570:-107757 None:intergenic
AAATTAGGGTTTATGGAGAA+AGG 0.424782 tig0019570:-105626 None:intergenic
TGCTGTTGTTTCGCTGAGAC+AGG 0.424938 tig0019570:+110699 Msa1374770:CDS
CTGGTGTGGTTGCAACTCTT+GGG 0.425235 tig0019570:+107897 Msa1374770:CDS
TTTGGGATTTCTGGAGTCTC+AGG 0.425430 tig0019570:+111032 Msa1374770:CDS
TTTCCTTCGCGACAAACTCC+TGG 0.425956 tig0019570:+111114 Msa1374770:CDS
GTTGCAGGCATCCTTCTCAC+TGG 0.426530 tig0019570:+108657 Msa1374770:intron
GGTCAGCGGGTGAACTGGGC+CGG 0.426662 tig0019570:-111950 None:intergenic
TCTGATTAAGGGTGCTGAAA+AGG 0.428079 tig0019570:+106538 Msa1374770:CDS
TCCTGTCAGCGACAGGCTGT+CGG 0.428603 tig0019570:-111972 None:intergenic
GTCCGATCGCTGATATTTAT+GGG 0.428946 tig0019570:+111868 Msa1374770:CDS
GTCGGGTCAGCGGGTGAACT+GGG 0.429792 tig0019570:-111954 None:intergenic
AAGGATTCTCCGTCCACTCT+TGG 0.429803 tig0019570:+109832 Msa1374770:CDS
GGTCAAAATCTGCCACCAAT+AGG 0.432835 tig0019570:-106790 None:intergenic
TCAGGTATATGTTATGAAGA+AGG 0.434148 tig0019570:+106343 Msa1374770:intron
AAATATTTCTGAAGAGACTC+TGG 0.434667 tig0019570:+107147 Msa1374770:CDS
GCATCCTTCTCACTGGGGTA+AGG 0.434903 tig0019570:+108664 Msa1374770:CDS
GAGAAGAATGCTTCTGGGAT+TGG 0.435150 tig0019570:-110120 None:intergenic
ACAACTACTAGAGGCTGCTT+TGG 0.435996 tig0019570:+111137 Msa1374770:CDS
GACGCTTCCATTATTACAAA+TGG 0.436306 tig0019570:+107812 Msa1374770:CDS
AATTCAGCCATGGTTTGTAA+TGG 0.438058 tig0019570:-107929 None:intergenic
AATGTCCATTTCTGTGTAGT+TGG 0.438246 tig0019570:-105703 None:intergenic
GTTCTTCTACTAGCATATAC+TGG 0.438779 tig0019570:+107614 Msa1374770:CDS
CAAGCCGCTTTCGATTCCTT+CGG 0.440812 tig0019570:+105891 Msa1374770:CDS
GGTGACTGATTAAACCGTAT+TGG 0.443432 tig0019570:-105830 None:intergenic
CTCTGCAACCTGGCATGTCT+GGG 0.444306 tig0019570:-106062 None:intergenic
GAACTTCTCGTTCTCCATAA+AGG 0.446635 tig0019570:-107769 None:intergenic
ATGGCAGTTATGGCGCCTAT+TGG 0.447339 tig0019570:+106775 Msa1374770:intron
AATTGCAGAAATTTGGGTCT+CGG 0.447548 tig0019570:+106882 Msa1374770:CDS
CTAATTCAAAAGTCTAGTCT+AGG 0.448338 tig0019570:-112347 None:intergenic
CGAAAGGGGTTATGTTCAAA+AGG 0.455941 tig0019570:+110642 Msa1374770:CDS
GAATTGTTTAAACTTATAAG+TGG 0.455984 tig0019570:+112475 Msa1374770:three_prime_UTR
TCGGGCGGTGTGCTGATTCC+GGG 0.456470 tig0019570:+110590 Msa1374770:CDS
CAACTACTAGAGGCTGCTTT+GGG 0.457722 tig0019570:+111138 Msa1374770:CDS
CCTGTCAGCGACAGGCTGTC+GGG 0.459295 tig0019570:-111971 None:intergenic
TATTGGGAGACTGCCTGTTA+TGG 0.459953 tig0019570:+106445 Msa1374770:CDS
AGCCATGGTTTGTAATGGAT+TGG 0.460916 tig0019570:-107924 None:intergenic
CTAGAGGCTGCTTTGGGAAA+GGG 0.461237 tig0019570:+111144 Msa1374770:CDS
GTTATGCTACGGTTAAGTTT+GGG 0.463498 tig0019570:+105973 Msa1374770:CDS
TTCAGTACACAGGAAAGGTC+GGG 0.465796 tig0019570:+107972 Msa1374770:CDS
CGACAGGCTGTCGGGTCAGC+GGG 0.468169 tig0019570:-111963 None:intergenic
AAGAGGACTTCAAGACTGCT+TGG 0.469345 tig0019570:+109957 Msa1374770:CDS
AATTAGGGTTTATGGAGAAA+GGG 0.470364 tig0019570:-105625 None:intergenic
GATGATACTACAACTGTTCT+GGG 0.472067 tig0019570:+108821 Msa1374770:CDS
GCAGTCTCTGGTAGAATGTT+GGG 0.473075 tig0019570:-111891 None:intergenic
TGCAGTCTCTGGTAGAATGT+TGG 0.474735 tig0019570:-111892 None:intergenic
CAGTATTTGTTTGGCAAAGA+GGG 0.476056 tig0019570:+109986 Msa1374770:CDS
CGAGTATACAACGGAAGGAC+CGG 0.476500 tig0019570:+111838 Msa1374770:CDS
GAGGAATGAGTTGCCTCATC+AGG 0.478810 tig0019570:+108934 Msa1374770:CDS
GACACATCCTTTCAAAAGGA+TGG 0.483147 tig0019570:+107865 Msa1374770:CDS
TGGAGCAAAGTTATTGTCTC+AGG 0.484390 tig0019570:+112239 Msa1374770:CDS
GCACATGCTAGGAAGCGAAT+GGG 0.484646 tig0019570:+107728 Msa1374770:CDS
CCATTATAGAATTCAGACTT+TGG 0.484719 tig0019570:-110289 None:intergenic
CTTGGACACATCCTTTCAAA+AGG 0.485028 tig0019570:+107861 Msa1374770:CDS
TTACTCTGACCAAGATATCC+AGG 0.485264 tig0019570:-110259 None:intergenic
GCAGCCTCTAGTAGTTGTCC+AGG 0.486041 tig0019570:-111132 None:intergenic
ATACGAGGGAAATAACTATT+GGG 0.487034 tig0019570:+106429 Msa1374770:CDS
GGTGATCTCACTGTTACGCC+TGG 0.488355 tig0019570:+105912 Msa1374770:CDS
GTCTGAAAGAGTGGTCTTTG+TGG 0.490054 tig0019570:-110211 None:intergenic
GTCATGTTCTTCGACCAATA+CGG 0.490177 tig0019570:+105816 Msa1374770:CDS
CACATTTATCGTCTGCCTCA+CGG 0.490360 tig0019570:-107427 None:intergenic
ATCCCAGAAGCATTCTTCTC+AGG 0.490953 tig0019570:+110123 Msa1374770:CDS
CGCCATTATCCAATAGGGAC+TGG 0.492490 tig0019570:-109907 None:intergenic
TGTTCTTCTTAATTCAGCCA+TGG 0.493474 tig0019570:-107939 None:intergenic
TAGGATGGTTGTTAAATTGG+TGG 0.495089 tig0019570:+107223 Msa1374770:CDS
CAAAGTGGTGATATTATCAT+CGG 0.496605 tig0019570:+110571 Msa1374770:CDS
TTGCAGGCATCCTTCTCACT+GGG 0.496735 tig0019570:+108658 Msa1374770:intron
CCCGACAGCCTGTCGCTGAC+AGG 0.497438 tig0019570:+111971 Msa1374770:CDS
CCTTCACCACACCAAAACTT+AGG 0.497897 tig0019570:-106014 None:intergenic
AATCGCTTCCTGTCAGCGAC+AGG 0.499397 tig0019570:-111979 None:intergenic
AACAAGAGGCTTGAGTTAGC+TGG 0.506910 tig0019570:+107671 Msa1374770:CDS
AGTAGGGACCTCGAATCTTC+CGG 0.508469 tig0019570:-112167 None:intergenic
AGGTATCAAGTTTGGTGAGA+TGG 0.508789 tig0019570:+112005 Msa1374770:CDS
ATTACTCCTAACTGGTATCA+AGG 0.510113 tig0019570:-112401 None:intergenic
AATGGCTTCAACAGAGGAAG+TGG 0.510195 tig0019570:-111208 None:intergenic
GAAAGTTGATGTTCACATCC+AGG 0.510695 tig0019570:+106106 Msa1374770:CDS
ATCTTCCGGCCACCAGATAC+CGG 0.512174 tig0019570:-112153 None:intergenic
GCATGGTCATGATTTGCAAA+TGG 0.512791 tig0019570:-110082 None:intergenic
ATCCTTTCAAAAGGATGGAA+AGG 0.513262 tig0019570:+107870 Msa1374770:CDS
TTGCAAATCATGACCATGCT+AGG 0.514874 tig0019570:+110086 Msa1374770:CDS
CTCCAGTATGCATGGACAGA+AGG 0.515563 tig0019570:+111005 Msa1374770:CDS
AATCACGCCATTATCCAATA+GGG 0.516901 tig0019570:-109912 None:intergenic
ACTAGAGGCTGCTTTGGGAA+AGG 0.518204 tig0019570:+111143 Msa1374770:CDS
GGAAAGGGCATCGCTTGTGT+TGG 0.523598 tig0019570:+111159 Msa1374770:CDS
GGTTTCAAATATTCCATACT+GGG 0.525085 tig0019570:+107169 Msa1374770:CDS
GCAGTTATGGCGCCTATTGG+TGG 0.526867 tig0019570:+106778 Msa1374770:intron
ATATAATCAAGAAGATTCCT+TGG 0.528881 tig0019570:+110348 Msa1374770:CDS
GTCTCAGGAGCTGTTCAGCA+TGG 0.529733 tig0019570:+112254 Msa1374770:CDS
AAAGCTAAAGCACACCGAAA+GGG 0.531794 tig0019570:+110627 Msa1374770:CDS
TCAACAGAGGAAGTGGAGAA+AGG 0.532899 tig0019570:-111201 None:intergenic
TCCATAAAGGTCTCTCTGCA+GGG 0.534372 tig0019570:-107756 None:intergenic
AGCCTGAGAAGAATGCTTCT+GGG 0.535263 tig0019570:-110125 None:intergenic
CCTATGAAGCTGGTCAGTAA+TGG 0.535807 tig0019570:-111226 None:intergenic
AGATGCTTCCCAGACATGCC+AGG 0.539702 tig0019570:+106054 Msa1374770:CDS
TGGTGAGCTGCTGGAGCGCG+AGG 0.542797 tig0019570:+107691 Msa1374770:CDS
AATATTTCTGAAGAGACTCT+GGG 0.543313 tig0019570:+107148 Msa1374770:CDS
TCTGATTGTCTTGGAAAACC+TGG 0.545916 tig0019570:+110241 Msa1374770:CDS
TTCCTAAATGGGGACTGGGT+TGG 0.547112 tig0019570:+108860 Msa1374770:CDS
TGCGACCGGTATCTGGTGGC+CGG 0.547112 tig0019570:+112148 Msa1374770:CDS
GTTGATAGCCTTGATGATGA+TGG 0.547320 tig0019570:+110523 Msa1374770:CDS
TGGTCAAGTCTGATCTGTGT+TGG 0.547872 tig0019570:+106465 Msa1374770:CDS
ATGGTTGTTAAATTGGTGGA+AGG 0.549390 tig0019570:+107227 Msa1374770:CDS
TAAATGTGAAGCATTTCGTA+GGG 0.550339 tig0019570:+107442 Msa1374770:CDS
TGCTAGGAAGCGAATGGGGA+AGG 0.551816 tig0019570:+107733 Msa1374770:CDS
CTTTATACTATGGTCCGTCC+CGG 0.551918 tig0019570:-110608 None:intergenic
CTTTGCTCCATATGGAACAC+TGG 0.552473 tig0019570:-112226 None:intergenic
TTCAAAAGAAAAGAAATGCA+AGG 0.552475 tig0019570:-112455 None:intergenic
AATGGCGTGATTGAGCTGAT+TGG 0.554573 tig0019570:+109923 Msa1374770:CDS
TGGAAGATTACCTATGAAGC+TGG 0.555512 tig0019570:-111236 None:intergenic
GGCAAGGTATCTAGCTTACA+TGG 0.555841 tig0019570:+107586 Msa1374770:CDS
ATCGATTATGGAGAGGCAGA+TGG 0.558185 tig0019570:+107374 Msa1374770:CDS
GTGCGCATATTATCTGATGC+AGG 0.558870 tig0019570:+109809 Msa1374770:CDS
AAGTGCACTTTGCACATGCT+AGG 0.559850 tig0019570:+107717 Msa1374770:CDS
TTGGTGGAAGGTTCGACGGA+GGG 0.559939 tig0019570:+107239 Msa1374770:CDS
ATAAGTCATCCTCTGCAACC+TGG 0.560391 tig0019570:-106072 None:intergenic
CAACGGAAGGACCGGTGAGA+TGG 0.562507 tig0019570:+111846 Msa1374770:CDS
GTGGTGGCCAGTGTTCCATA+TGG 0.562685 tig0019570:+112219 Msa1374770:CDS
CAAACTTAACCGTAGCATAA+CGG 0.562948 tig0019570:-105971 None:intergenic
GCTGACAGGAAGCGATTTGG+AGG 0.563584 tig0019570:+111985 Msa1374770:CDS
GATTGGTCCTGAAGAAGAAG+AGG 0.564149 tig0019570:+109940 Msa1374770:CDS
TCAGTATTTGTTTGGCAAAG+AGG 0.564795 tig0019570:+109985 Msa1374770:CDS
TGAACCTATGTGTTCCATTG+TGG 0.566006 tig0019570:-105661 None:intergenic
TGCACATGCTAGGAAGCGAA+TGG 0.566559 tig0019570:+107727 Msa1374770:CDS
GCGACAGGCTGTCGGGTCAG+CGG 0.566910 tig0019570:-111964 None:intergenic
TCTGGTGGCCGGAAGATTCG+AGG 0.567048 tig0019570:+112159 Msa1374770:CDS
CACTCGTCAATAGATTCTGC+GGG 0.567248 tig0019570:-107518 None:intergenic
GATGTCATTGTCTGAAAGAG+TGG 0.567955 tig0019570:-110220 None:intergenic
TGTCTGTCGAGATACCTGTA+TGG 0.568259 tig0019570:+107300 Msa1374770:CDS
TAAAGCTAAAGCACACCGAA+AGG 0.569174 tig0019570:+110626 Msa1374770:CDS
GTTCAGTACACAGGAAAGGT+CGG 0.569216 tig0019570:+107971 Msa1374770:CDS
AAGCTAAAGCACACCGAAAG+GGG 0.569664 tig0019570:+110628 Msa1374770:CDS
AATTTCCCCTTCACAAAACA+AGG 0.569701 tig0019570:+111057 Msa1374770:CDS
CATCGGCTGATTCACAGAAA+CGG 0.571228 tig0019570:-112191 None:intergenic
GTCAGTAATGGCTTCAACAG+AGG 0.571703 tig0019570:-111214 None:intergenic
CAGCGATCGGACCATCTCAC+CGG 0.571876 tig0019570:-111857 None:intergenic
GATAAGTTCTCCAGTATGCA+TGG 0.571930 tig0019570:+110997 Msa1374770:CDS
TAAATTGGTGGAAGGTTCGA+CGG 0.574279 tig0019570:+107235 Msa1374770:CDS
TCTCAGGAGCTGTTCAGCAT+GGG 0.574908 tig0019570:+112255 Msa1374770:CDS
ATGGAAAGCCATCATCATCA+AGG 0.577034 tig0019570:-110531 None:intergenic
ACTGGCCACCACAATGTCAT+CGG 0.577833 tig0019570:-112208 None:intergenic
ACCCCAGATGGTGAAAATTG+TGG 0.578472 tig0019570:+108701 Msa1374770:CDS
ATAAATGTGAAGCATTTCGT+AGG 0.579430 tig0019570:+107441 Msa1374770:CDS
CATCATCAAGGCTATCAACT+CGG 0.579816 tig0019570:-110519 None:intergenic
ACAATGACATCTGATTGTCT+TGG 0.579927 tig0019570:+110232 Msa1374770:CDS
TCCAGTATGCATGGACAGAA+GGG 0.580759 tig0019570:+111006 Msa1374770:CDS
TAATTCAAAAGTCTAGTCTA+GGG 0.580816 tig0019570:-112346 None:intergenic
TACCGCGCTGCAACGAAGCA+CGG 0.580917 tig0019570:-110378 None:intergenic
GTATCTGAGACGAATCACTC+AGG 0.581128 tig0019570:-112086 None:intergenic
GCCGAAATCCTCAACGAACT+CGG 0.582900 tig0019570:+105756 Msa1374770:CDS
AACCAATCCATTACAAACCA+TGG 0.584723 tig0019570:+107922 Msa1374770:CDS
TCAGCTGTTTGATTGTGGGA+TGG 0.584783 tig0019570:+108787 Msa1374770:CDS
ACGAATCACTCAGGGTGAAG+AGG 0.588585 tig0019570:-112077 None:intergenic
GTATCTAGCTTACATGGTGA+AGG 0.589191 tig0019570:+107592 Msa1374770:CDS
TGCTACGGTTAAGTTTGGGA+AGG 0.589935 tig0019570:+105977 Msa1374770:CDS
TCAAAAGAAAAGAAATGCAA+GGG 0.590781 tig0019570:-112454 None:intergenic
GGCCCATAAATATCAGCGAT+CGG 0.593035 tig0019570:-111870 None:intergenic
TAAGTGGAATGCTCATATCC+GGG 0.593595 tig0019570:+112491 Msa1374770:three_prime_UTR
TGTCCAGGAGTTTGTCGCGA+AGG 0.593618 tig0019570:-111117 None:intergenic
GTCTTTGTGGATAAAACAGT+TGG 0.594545 tig0019570:-110198 None:intergenic
GCCATAAATGTACCACAAAG+TGG 0.595357 tig0019570:+106855 Msa1374770:CDS
TGATTCACAGAAACGGCAGT+AGG 0.595950 tig0019570:-112184 None:intergenic
GAGGACTTCAAGACTGCTTG+GGG 0.598252 tig0019570:+109959 Msa1374770:CDS
CCAGACATGCCAGGTTGCAG+AGG 0.599813 tig0019570:+106063 Msa1374770:CDS
AAAGTGGTGATATTATCATC+GGG 0.600046 tig0019570:+110572 Msa1374770:CDS
TACTAACAACCAAGAGTGGA+CGG 0.601761 tig0019570:-109841 None:intergenic
GCACTCGTCAATAGATTCTG+CGG 0.603702 tig0019570:-107519 None:intergenic
TTTATCGTCTGCCTCACGGA+TGG 0.604454 tig0019570:-107423 None:intergenic
TGAACATTACCGTTATGCTA+CGG 0.604890 tig0019570:+105962 Msa1374770:CDS
TCAACCACAATGGAACACAT+AGG 0.605155 tig0019570:+105657 Msa1374770:exon
TTCTTAGAAGGATCAAAACC+AGG 0.605160 tig0019570:-105930 None:intergenic
GATTAAAAGTGAACCTGATG+AGG 0.605290 tig0019570:-108947 None:intergenic
TGACTTTGTCTTCGGACATG+TGG 0.610967 tig0019570:-111915 None:intergenic
AGAACTTATCTCCAAGAACT+GGG 0.614017 tig0019570:-110984 None:intergenic
TTGACCACCATTTACCACAT+CGG 0.614388 tig0019570:-106816 None:intergenic
GTGCTGTCTTCGAATGATGA+GGG 0.614672 tig0019570:+110667 Msa1374770:CDS
CGTGATTGCCTGATAGCTCA+TGG 0.615327 tig0019570:+112030 Msa1374770:CDS
CTGGTATCAAGGAAACATCC+AGG 0.618423 tig0019570:-112390 None:intergenic
TATTAAAGGGGAGGATACGA+GGG 0.623722 tig0019570:+106415 Msa1374770:CDS
CAAACCTTACCCCAGTGAGA+AGG 0.623788 tig0019570:-108668 None:intergenic
TGATAAAGATATTAAAGGGG+AGG 0.623822 tig0019570:+106406 Msa1374770:CDS
ATATTAAAGGGGAGGATACG+AGG 0.624427 tig0019570:+106414 Msa1374770:CDS
GATTCACAGAAACGGCAGTA+GGG 0.625924 tig0019570:-112183 None:intergenic
TGCAAATGTGATCTTGCGAC+CGG 0.628861 tig0019570:+112134 Msa1374770:CDS
GGTACAACACTCTCCTAGCA+TGG 0.629214 tig0019570:-110099 None:intergenic
CATTGATAAAGATATTAAAG+GGG 0.630419 tig0019570:+106403 Msa1374770:CDS
TATCATCACCGAGTTCGTTG+AGG 0.631249 tig0019570:-105764 None:intergenic
TAATGGGCAGAATGCAATTG+TGG 0.631335 tig0019570:+110306 Msa1374770:CDS
AACTCCTGGACAACTACTAG+AGG 0.636159 tig0019570:+111128 Msa1374770:CDS
TCGTCAATAGATTCTGCGGG+TGG 0.637226 tig0019570:-107515 None:intergenic
GCATATTATCTGATGCAGGA+AGG 0.637268 tig0019570:+109813 Msa1374770:CDS
TCAGTACACAGGAAAGGTCG+GGG 0.637306 tig0019570:+107973 Msa1374770:CDS
GCGGTGTGCTGATTCCGGGA+CGG 0.638296 tig0019570:+110594 Msa1374770:CDS
AAAGTCAAATTCAGGAACAC+CGG 0.640672 tig0019570:+111931 Msa1374770:CDS
GTATTGTCTATGGCATATTG+TGG 0.643347 tig0019570:-106905 None:intergenic
ACGAACGAGTATACAACGGA+AGG 0.643362 tig0019570:+111833 Msa1374770:CDS
GCAGATGAAGAGAAATAGGA+TGG 0.645163 tig0019570:+107208 Msa1374770:CDS
ATCGGTACTTACTACTCCTG+TGG 0.646742 tig0019570:-108744 None:intergenic
AAGTATGGATTCAGTTACAT+CGG 0.648107 tig0019570:-108762 None:intergenic
GATGGAAAGGATTTCTGGTG+TGG 0.648670 tig0019570:+107883 Msa1374770:CDS
GTGGCTGTCAATGTGCATCT+CGG 0.649101 tig0019570:+110325 Msa1374770:CDS
TGATCTCATCGATTATGGAG+AGG 0.650177 tig0019570:+107367 Msa1374770:CDS
GAAGTGATAAGTTTAAGACT+GGG 0.651148 tig0019570:+106369 Msa1374770:CDS
TGGATGAGTGAAACTGAGAA+AGG 0.652651 tig0019570:+106485 Msa1374770:CDS
ACAAGTTCAGTACACAGGAA+AGG 0.656004 tig0019570:+107967 Msa1374770:CDS
CGAAGCACGGTTCATAACCA+AGG 0.659189 tig0019570:-110365 None:intergenic
ATCCCACAATCAAACAGCTG+AGG 0.660109 tig0019570:-108785 None:intergenic
TGTGCTGTCTTCGAATGATG+AGG 0.662109 tig0019570:+110666 Msa1374770:CDS
TGAATCAGCCGATGACATTG+TGG 0.662510 tig0019570:+112200 Msa1374770:CDS
CACATGCTAGGAAGCGAATG+GGG 0.662806 tig0019570:+107729 Msa1374770:CDS
CAGAGCTACGAACTAGAAGA+CGG 0.663373 tig0019570:+108912 Msa1374770:CDS
TGTCGCGAAGGAAATGCATG+TGG 0.663756 tig0019570:-111105 None:intergenic
ATTGATCTTCATCGTCGTCG+AGG 0.665163 tig0019570:-105728 None:intergenic
ATGATACTACAACTGTTCTG+GGG 0.665902 tig0019570:+108822 Msa1374770:CDS
TATCTGAGACGAATCACTCA+GGG 0.666324 tig0019570:-112085 None:intergenic
TCGACGGAGGGAATTACACA+TGG 0.668026 tig0019570:+107251 Msa1374770:CDS
CGTAACAGTGAGATCACCGA+AGG 0.669550 tig0019570:-105907 None:intergenic
ATTGGTGGAAGGTTCGACGG+AGG 0.669687 tig0019570:+107238 Msa1374770:CDS
ATCACCGAAGGAATCGAAAG+CGG 0.675536 tig0019570:-105895 None:intergenic
TGCTGTCTTCGAATGATGAG+GGG 0.676097 tig0019570:+110668 Msa1374770:CDS
AGATTACTAACAACCAAGAG+TGG 0.676652 tig0019570:-109845 None:intergenic
AGGCAACAAGTTCAGTACAC+AGG 0.677661 tig0019570:+107962 Msa1374770:CDS
AAAGAAGCTTAAGCTTAAAG+GGG 0.678252 tig0019570:+105587 Msa1374770:five_prime_UTR
TCGCTTGTGTTGGTTCACTG+AGG 0.682522 tig0019570:+111169 Msa1374770:CDS
GGTGATTGTGAATTTGACCA+CGG 0.685666 tig0019570:+106506 Msa1374770:CDS
TGCAGGCATCCTTCTCACTG+GGG 0.689696 tig0019570:+108659 Msa1374770:intron
GTTGGAGCAAATTTGCAAAG+TGG 0.689728 tig0019570:+110556 Msa1374770:CDS
TAATCAGAAAGTAGCCTCCG+TGG 0.691875 tig0019570:-106523 None:intergenic
ATCAGCCGATGACATTGTGG+TGG 0.700098 tig0019570:+112203 Msa1374770:CDS
CACCATTTACCACATCGGCG+TGG 0.703620 tig0019570:-106811 None:intergenic
ATCTTGCGACCGGTATCTGG+TGG 0.706820 tig0019570:+112144 Msa1374770:CDS
AACCGTGCTTCGTTGCAGCG+CGG 0.708946 tig0019570:+110376 Msa1374770:CDS
AAATGTGAAGCATTTCGTAG+GGG 0.709518 tig0019570:+107443 Msa1374770:CDS
TCTCTTTGCATCCATCCGTG+AGG 0.721646 tig0019570:+107412 Msa1374770:CDS
GTGGTGATATTATCATCGGG+CGG 0.734436 tig0019570:+110575 Msa1374770:CDS
TGGCTGAATTAAGAAGAACA+AGG 0.738169 tig0019570:+107942 Msa1374770:CDS
AGCTACGAACTAGAAGACGG+AGG 0.741616 tig0019570:+108915 Msa1374770:CDS
CACGCCGATGTGGTAAATGG+TGG 0.760187 tig0019570:+106812 Msa1374770:CDS
GGGAACGAACGAGTATACAA+CGG 0.771797 tig0019570:+111829 Msa1374770:CDS
GATTGTGAATTTGACCACGG+AGG 0.779801 tig0019570:+106509 Msa1374770:CDS
GTATTGGTCGAAGAACATGA+CGG 0.801822 tig0019570:-105814 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!!! TATATATATATATTCAGTTT+TGG + tig0019570:109362-109381 Msa1374770:intron 10.0%
!! TACATTGATAAAGATATTAA+AGG + tig0019570:106401-106420 Msa1374770:CDS 15.0%
!! ACATTGATAAAGATATTAAA+GGG + tig0019570:106402-106421 Msa1374770:CDS 15.0%
!!! TTGTAAAATGTTTTCAAAAT+AGG + tig0019570:106933-106952 Msa1374770:intron 15.0%
!!! TGTAAAATGTTTTCAAAATA+GGG + tig0019570:106934-106953 Msa1374770:intron 15.0%
!!! TAAAAAAATTGCATTTTGAT+TGG + tig0019570:106982-107001 Msa1374770:intron 15.0%
!!! AAAAAAATTGCATTTTGATT+GGG + tig0019570:106983-107002 Msa1374770:intron 15.0%
!! TAAAACTAAATAAAATTACC+TGG + tig0019570:108190-108209 Msa1374770:intron 15.0%
!! TAAATAAGAGATTAATTTAC+AGG - tig0019570:108416-108435 None:intergenic 15.0%
!!! TTTATTTTAATAGAAGCTTA+TGG + tig0019570:108635-108654 Msa1374770:intron 15.0%
!! TCTTATGGATAAAAAAATTT+GGG + tig0019570:110765-110784 Msa1374770:intron 15.0%
!! TGTAATGTACAAAATAAATA+GGG - tig0019570:111789-111808 None:intergenic 15.0%
!!! TTCAATAATCAGCATTTTTT+TGG - tig0019570:105454-105473 None:intergenic 20.0%
!! AAATGAAAAATTAGGGTTTA+TGG - tig0019570:105636-105655 None:intergenic 20.0%
!! CATTGATAAAGATATTAAAG+GGG + tig0019570:106403-106422 Msa1374770:CDS 20.0%
!!! AAACAATTGTGAATTTTACA+GGG - tig0019570:106659-106678 None:intergenic 20.0%
!!! TAAACAATTGTGAATTTTAC+AGG - tig0019570:106660-106679 None:intergenic 20.0%
!!! CTTTTTAATCCTTTAATGTT+CGG - tig0019570:107563-107582 None:intergenic 20.0%
!! CATTAAAGGATTAAAAAGAA+AGG + tig0019570:107565-107584 Msa1374770:CDS 20.0%
!! TAGAAGTTAAAAGTAACTTA+CGG - tig0019570:108010-108029 None:intergenic 20.0%
!! CTAGGATAAAATAATTCTAT+TGG - tig0019570:108056-108075 None:intergenic 20.0%
!!! ATTGATAGCAATATTATAAG+GGG - tig0019570:108158-108177 None:intergenic 20.0%
!!! GATTGATAGCAATATTATAA+GGG - tig0019570:108159-108178 None:intergenic 20.0%
!!! TGATTGATAGCAATATTATA+AGG - tig0019570:108160-108179 None:intergenic 20.0%
!!! ATAGTTATGTTTTAAGTATC+TGG + tig0019570:109150-109169 Msa1374770:intron 20.0%
!! ATGTCTAACATATGATTAAA+TGG + tig0019570:109216-109235 Msa1374770:intron 20.0%
!! GTCTTATGGATAAAAAAATT+TGG + tig0019570:110764-110783 Msa1374770:intron 20.0%
!! AAAAAATTAGATTTCAGTTG+TGG - tig0019570:110897-110916 None:intergenic 20.0%
!! TAAAGTAAACTAAATCATGA+TGG - tig0019570:111259-111278 None:intergenic 20.0%
!!! TTTTTTAATGAATCTTGAAC+AGG - tig0019570:111315-111334 None:intergenic 20.0%
!! ACAACTTAAAATGAAACTTT+GGG - tig0019570:111744-111763 None:intergenic 20.0%
!! CTGTAATGTACAAAATAAAT+AGG - tig0019570:111790-111809 None:intergenic 20.0%
!! GAATTGTTTAAACTTATAAG+TGG + tig0019570:112475-112494 Msa1374770:three_prime_UTR 20.0%
! AAAAGAAGCTTAAGCTTAAA+GGG + tig0019570:105586-105605 Msa1374770:five_prime_UTR 25.0%
! GGTTGAGAAATGAAAAATTA+GGG - tig0019570:105643-105662 None:intergenic 25.0%
! TGGTTGAGAAATGAAAAATT+AGG - tig0019570:105644-105663 None:intergenic 25.0%
! TACAATCAATTCATCAATTC+TGG + tig0019570:105864-105883 Msa1374770:CDS 25.0%
! AATTTCAAATCATACTAACC+TGG - tig0019570:106127-106146 None:intergenic 25.0%
! TTAACACAAAACCATCAAAT+AGG - tig0019570:106157-106176 None:intergenic 25.0%
! AAAACACACACAAAAATCAA+AGG - tig0019570:106217-106236 None:intergenic 25.0%
!!! TATTTTGATGTTCAGATAAC+AGG + tig0019570:106304-106323 Msa1374770:intron 25.0%
! ATAAAAATCTGCAACAAAAG+CGG - tig0019570:107116-107135 None:intergenic 25.0%
! AAATAGGATGGTTGTTAAAT+TGG + tig0019570:107220-107239 Msa1374770:CDS 25.0%
!! TATGTTTTTCCGAACATTAA+AGG + tig0019570:107551-107570 Msa1374770:CDS 25.0%
! AGAAGTTAAAAGTAACTTAC+GGG - tig0019570:108009-108028 None:intergenic 25.0%
! TTCACATGTATAAGTAGTTT+AGG - tig0019570:108133-108152 None:intergenic 25.0%
! TAAACTACTTATACATGTGA+AGG + tig0019570:108132-108151 Msa1374770:intron 25.0%
! TTGTGGACTTGTAAAAAATT+TGG + tig0019570:108718-108737 Msa1374770:CDS 25.0%
!! AAAGACAAAGTTTTCCTAAA+TGG + tig0019570:108848-108867 Msa1374770:CDS 25.0%
!! AAGACAAAGTTTTCCTAAAT+GGG + tig0019570:108849-108868 Msa1374770:CDS 25.0%
!!! AGTGCTTTAAAATATGACAA+AGG - tig0019570:109001-109020 None:intergenic 25.0%
!! TTTGTTTGAAATTTGCTTTC+TGG + tig0019570:109256-109275 Msa1374770:intron 25.0%
!! TTGTTTGAAATTTGCTTTCT+GGG + tig0019570:109257-109276 Msa1374770:intron 25.0%
!!! TGTTCTCTATTTCTACAAAA+AGG - tig0019570:109420-109439 None:intergenic 25.0%
! AATAGAGAACAACAAATGAA+AGG + tig0019570:109429-109448 Msa1374770:intron 25.0%
! ATAGAGAACAACAAATGAAA+GGG + tig0019570:109430-109449 Msa1374770:intron 25.0%
! CATAATTGGAAACATAACAT+AGG - tig0019570:109614-109633 None:intergenic 25.0%
! TCAACAAGGGAAAAAAAATA+GGG - tig0019570:109671-109690 None:intergenic 25.0%
! TTCAACAAGGGAAAAAAAAT+AGG - tig0019570:109672-109691 None:intergenic 25.0%
!! TGGCATATTATTTTCAACAA+GGG - tig0019570:109684-109703 None:intergenic 25.0%
! CAAATTTATTGCAATTACTG+TGG - tig0019570:109704-109723 None:intergenic 25.0%
! CTTGATATGTCATTCTTATT+AGG + tig0019570:110040-110059 Msa1374770:CDS 25.0%
! AAGCATCAACTCTTATATTT+GGG - tig0019570:110171-110190 None:intergenic 25.0%
!! AAAGCATCAACTCTTATATT+TGG - tig0019570:110172-110191 None:intergenic 25.0%
! CAAAGTCTGAATTCTATAAT+GGG + tig0019570:110290-110309 Msa1374770:CDS 25.0%
! ATATAATCAAGAAGATTCCT+TGG + tig0019570:110348-110367 Msa1374770:CDS 25.0%
! ATCATAATTGAAGTAGTTCT+TGG - tig0019570:110737-110756 None:intergenic 25.0%
! TGTTGTATGATAAAATTTGC+AGG + tig0019570:110954-110973 Msa1374770:intron 25.0%
! TATGATAAAATTTGCAGGTT+AGG + tig0019570:110959-110978 Msa1374770:intron 25.0%
! TGTGGATTTATAACAATATC+AGG - tig0019570:111090-111109 None:intergenic 25.0%
!! GTTTACTTTAATTGCAGTTT+TGG + tig0019570:111269-111288 Msa1374770:intron 25.0%
!! TGGTTACTTGTATTTTATGT+AGG + tig0019570:111289-111308 Msa1374770:intron 25.0%
!!! TTTACTTTAAAACCCAGTTT+GGG + tig0019570:111458-111477 Msa1374770:intron 25.0%
!! GAATATTTTATTGTAGATCC+AGG + tig0019570:111600-111619 Msa1374770:intron 25.0%
! TATTGAGACATGTTATTGTT+AGG - tig0019570:111674-111693 None:intergenic 25.0%
! GACAACTTAAAATGAAACTT+TGG - tig0019570:111745-111764 None:intergenic 25.0%
! TAATTCAAAAGTCTAGTCTA+GGG - tig0019570:112349-112368 None:intergenic 25.0%
! ATTAGGTGTATATATCAGTT+TGG + tig0019570:112365-112384 Msa1374770:three_prime_UTR 25.0%
! TCAAAAGAAAAGAAATGCAA+GGG - tig0019570:112457-112476 None:intergenic 25.0%
! TTCAAAAGAAAAGAAATGCA+AGG - tig0019570:112458-112477 None:intergenic 25.0%
GAAAAGAAGCTTAAGCTTAA+AGG + tig0019570:105585-105604 Msa1374770:five_prime_UTR 30.0%
AAAGAAGCTTAAGCTTAAAG+GGG + tig0019570:105587-105606 Msa1374770:five_prime_UTR 30.0%
AATTAGGGTTTATGGAGAAA+GGG - tig0019570:105628-105647 None:intergenic 30.0%
AAATTAGGGTTTATGGAGAA+AGG - tig0019570:105629-105648 None:intergenic 30.0%
! TTTTCATTTCTCAACCACAA+TGG + tig0019570:105647-105666 Msa1374770:exon 30.0%
!! ATTGATTGTACGAGTTGATT+TGG - tig0019570:105854-105873 None:intergenic 30.0%
AATTCGTAGTTCCTATTTGA+TGG + tig0019570:106143-106162 Msa1374770:intron 30.0%
!!! TTGTGTGTGTTTTTGAAATG+TGG + tig0019570:106224-106243 Msa1374770:intron 30.0%
!!! TGTGTGTGTTTTTGAAATGT+GGG + tig0019570:106225-106244 Msa1374770:intron 30.0%
TCAGGTATATGTTATGAAGA+AGG + tig0019570:106343-106362 Msa1374770:intron 30.0%
! GAAGTGATAAGTTTAAGACT+GGG + tig0019570:106369-106388 Msa1374770:CDS 30.0%
TGATAAAGATATTAAAGGGG+AGG + tig0019570:106406-106425 Msa1374770:CDS 30.0%
ATACGAGGGAAATAACTATT+GGG + tig0019570:106429-106448 Msa1374770:CDS 30.0%
!!! TTACCGATTTTGTACGTTTT+AGG + tig0019570:106606-106625 Msa1374770:intron 30.0%
!!! TACCGATTTTGTACGTTTTA+GGG + tig0019570:106607-106626 Msa1374770:intron 30.0%
AACCCTAAAACGTACAAAAT+CGG - tig0019570:106612-106631 None:intergenic 30.0%
!!! TTTAGTCCCTTTTTTGCTTT+AGG + tig0019570:106716-106735 Msa1374770:intron 30.0%
!!! TTAGTCCCTTTTTTGCTTTA+GGG + tig0019570:106717-106736 Msa1374770:intron 30.0%
TTTGTCCCTAAAGCAAAAAA+GGG - tig0019570:106725-106744 None:intergenic 30.0%
! TTTTGTCCCTAAAGCAAAAA+AGG - tig0019570:106726-106745 None:intergenic 30.0%
GATAACACTGAACAAAAAAC+AGG - tig0019570:106753-106772 None:intergenic 30.0%
! TTTTGTTCAGTGTTATCCAA+TGG + tig0019570:106756-106775 Msa1374770:intron 30.0%
TGGTCAAAATTGCAGAAATT+TGG + tig0019570:106875-106894 Msa1374770:CDS 30.0%
GGTCAAAATTGCAGAAATTT+GGG + tig0019570:106876-106895 Msa1374770:CDS 30.0%
TACAAAAGCAGTATTGTCTA+TGG - tig0019570:106918-106937 None:intergenic 30.0%
! AAATATTTCTGAAGAGACTC+TGG + tig0019570:107147-107166 Msa1374770:CDS 30.0%
! AATATTTCTGAAGAGACTCT+GGG + tig0019570:107148-107167 Msa1374770:CDS 30.0%
GGTTTCAAATATTCCATACT+GGG + tig0019570:107169-107188 Msa1374770:CDS 30.0%
GCAAAAAACAATATCCATAC+AGG - tig0019570:107317-107336 None:intergenic 30.0%
!!! TGGATATTGTTTTTTGCTCT+TGG + tig0019570:107320-107339 Msa1374770:CDS 30.0%
! ATTGTTGATCTCATCGATTA+TGG + tig0019570:107362-107381 Msa1374770:CDS 30.0%
! ATAAATGTGAAGCATTTCGT+AGG + tig0019570:107441-107460 Msa1374770:CDS 30.0%
! TAAATGTGAAGCATTTCGTA+GGG + tig0019570:107442-107461 Msa1374770:CDS 30.0%
AAGGATTAAAAAGAAAGGCA+AGG + tig0019570:107570-107589 Msa1374770:CDS 30.0%
TTGGAGACCATTTGTAATAA+TGG - tig0019570:107822-107841 None:intergenic 30.0%
! TCAGTACGTTCTAAATGAAA+TGG + tig0019570:108369-108388 Msa1374770:intron 30.0%
AAGTATGGATTCAGTTACAT+CGG - tig0019570:108765-108784 None:intergenic 30.0%
! AGACAAAGTTTTCCTAAATG+GGG + tig0019570:108850-108869 Msa1374770:CDS 30.0%
TTCAGATTCCATATCATTTG+TGG + tig0019570:108889-108908 Msa1374770:CDS 30.0%
!! GTTTTAAGTATCTGGAAACT+TGG + tig0019570:109158-109177 Msa1374770:intron 30.0%
TATAAACCAATCTTTGACAG+AGG - tig0019570:109346-109365 None:intergenic 30.0%
AAATGTGAAAAGAGCAGTAT+TGG - tig0019570:109585-109604 None:intergenic 30.0%
AATTGGAAACATAACATAGG+AGG - tig0019570:109611-109630 None:intergenic 30.0%
GCTTACAAAGTCAACATAAT+TGG - tig0019570:109628-109647 None:intergenic 30.0%
! GTGGCATATTATTTTCAACA+AGG - tig0019570:109685-109704 None:intergenic 30.0%
AAACAGAAATGGTTAACACA+AGG - tig0019570:109754-109773 None:intergenic 30.0%
TGTGTTAACCATTTCTGTTT+AGG + tig0019570:109754-109773 Msa1374770:intron 30.0%
AGTAATCTGCTCAAGATTAA+AGG + tig0019570:109860-109879 Msa1374770:CDS 30.0%
CCATTATAGAATTCAGACTT+TGG - tig0019570:110292-110311 None:intergenic 30.0%
CCAAAGTCTGAATTCTATAA+TGG + tig0019570:110289-110308 Msa1374770:CDS 30.0%
CCAAAATTAACAATGTCTTC+AGG - tig0019570:110478-110497 None:intergenic 30.0%
! CCTGAAGACATTGTTAATTT+TGG + tig0019570:110475-110494 Msa1374770:CDS 30.0%
GGAAAGATACAGAGTAAAAT+TGG + tig0019570:110496-110515 Msa1374770:CDS 30.0%
CAAAGTGGTGATATTATCAT+CGG + tig0019570:110571-110590 Msa1374770:CDS 30.0%
AAAGTGGTGATATTATCATC+GGG + tig0019570:110572-110591 Msa1374770:CDS 30.0%
!! TGTGCTTTAGCTTTATACTA+TGG - tig0019570:110621-110640 None:intergenic 30.0%
TTATGATGCATCTTGTCTTA+TGG + tig0019570:110750-110769 Msa1374770:intron 30.0%
! CATACAACAGTTTTTCTTAG+CGG - tig0019570:110943-110962 None:intergenic 30.0%
AACTGAACTGAACTTTAAGT+TGG - tig0019570:111440-111459 None:intergenic 30.0%
!! GTTTACTTTAAAACCCAGTT+TGG + tig0019570:111457-111476 Msa1374770:intron 30.0%
CAATAACATGTCTCAATATG+TGG + tig0019570:111676-111695 Msa1374770:intron 30.0%
! TATTTTGTACATTACAGAGC+TGG + tig0019570:111793-111812 Msa1374770:intron 30.0%
CTAATTCAAAAGTCTAGTCT+AGG - tig0019570:112350-112369 None:intergenic 30.0%
! CTAGACTAGACTTTTGAATT+AGG + tig0019570:112348-112367 Msa1374770:three_prime_UTR 30.0%
TGTCATAAATTACTCCTAAC+TGG - tig0019570:112412-112431 None:intergenic 30.0%
!!! CCATCATTCGTTAGTTTTTT+GGG - tig0019570:112526-112545 None:intergenic 30.0%
CCAAAAAACTAACGAATGAT+GGG + tig0019570:112524-112543 Msa1374770:three_prime_UTR 30.0%
! CAAAACCTTGTGAGTTTTTG+CGG - tig0019570:105514-105533 None:intergenic 35.0%
AATGTCCATTTCTGTGTAGT+TGG - tig0019570:105706-105725 None:intergenic 35.0%
TTCTTAGAAGGATCAAAACC+AGG - tig0019570:105933-105952 None:intergenic 35.0%
!! GGTTTTGATCCTTCTAAGAA+AGG + tig0019570:105933-105952 Msa1374770:CDS 35.0%
TGAACATTACCGTTATGCTA+CGG + tig0019570:105962-105981 Msa1374770:CDS 35.0%
CAAACTTAACCGTAGCATAA+CGG - tig0019570:105974-105993 None:intergenic 35.0%
GTTATGCTACGGTTAAGTTT+GGG + tig0019570:105973-105992 Msa1374770:CDS 35.0%
! CGAAGTGATAAGTTTAAGAC+TGG + tig0019570:106368-106387 Msa1374770:CDS 35.0%
GATACGAGGGAAATAACTAT+TGG + tig0019570:106428-106447 Msa1374770:CDS 35.0%
CAAGTAACAAAACTCATGCA+GGG - tig0019570:106691-106710 None:intergenic 35.0%
ACAAGTAACAAAACTCATGC+AGG - tig0019570:106692-106711 None:intergenic 35.0%
TAAATGGTGGTCAATATTGC+AGG + tig0019570:106825-106844 Msa1374770:CDS 35.0%
ACCACTTTGTGGTACATTTA+TGG - tig0019570:106859-106878 None:intergenic 35.0%
AATTGCAGAAATTTGGGTCT+CGG + tig0019570:106882-106901 Msa1374770:CDS 35.0%
GTATTGTCTATGGCATATTG+TGG - tig0019570:106908-106927 None:intergenic 35.0%
GGGTTTCAAATATTCCATAC+TGG + tig0019570:107168-107187 Msa1374770:CDS 35.0%
TAGGATGGTTGTTAAATTGG+TGG + tig0019570:107223-107242 Msa1374770:CDS 35.0%
ATGGTTGTTAAATTGGTGGA+AGG + tig0019570:107227-107246 Msa1374770:CDS 35.0%
! AAATGTGAAGCATTTCGTAG+GGG + tig0019570:107443-107462 Msa1374770:CDS 35.0%
TTCTTAGAGGAACGTGTAAA+AGG + tig0019570:107482-107501 Msa1374770:CDS 35.0%
GTTCTTCTACTAGCATATAC+TGG + tig0019570:107614-107633 Msa1374770:CDS 35.0%
GACGCTTCCATTATTACAAA+TGG + tig0019570:107812-107831 Msa1374770:CDS 35.0%
ATCCTTTCAAAAGGATGGAA+AGG + tig0019570:107870-107889 Msa1374770:CDS 35.0%
! ATCCTTTCCATCCTTTTGAA+AGG - tig0019570:107875-107894 None:intergenic 35.0%
AAAAGGATGGAAAGGATTTC+TGG + tig0019570:107878-107897 Msa1374770:CDS 35.0%
AACCAATCCATTACAAACCA+TGG + tig0019570:107922-107941 Msa1374770:CDS 35.0%
! AATTCAGCCATGGTTTGTAA+TGG - tig0019570:107932-107951 None:intergenic 35.0%
TGTTCTTCTTAATTCAGCCA+TGG - tig0019570:107942-107961 None:intergenic 35.0%
TGGCTGAATTAAGAAGAACA+AGG + tig0019570:107942-107961 Msa1374770:CDS 35.0%
TACCTGGTCATTAAAACTCA+CGG + tig0019570:108206-108225 Msa1374770:intron 35.0%
TGAAATGGAAGAAACAGAGA+TGG - tig0019570:108294-108313 None:intergenic 35.0%
AGCTGATACTGAACATGAAA+TGG - tig0019570:108309-108328 None:intergenic 35.0%
ATTGTCTTAGTAGCTTCAGA+TGG + tig0019570:108510-108529 Msa1374770:intron 35.0%
TAATAGAAGCTTATGGTTGC+AGG + tig0019570:108642-108661 Msa1374770:intron 35.0%
TGATGATACTACAACTGTTC+TGG + tig0019570:108820-108839 Msa1374770:CDS 35.0%
GATGATACTACAACTGTTCT+GGG + tig0019570:108821-108840 Msa1374770:CDS 35.0%
ATGATACTACAACTGTTCTG+GGG + tig0019570:108822-108841 Msa1374770:CDS 35.0%
GATTAAAAGTGAACCTGATG+AGG - tig0019570:108950-108969 None:intergenic 35.0%
CACTTACTTTACATGAGTCA+TGG + tig0019570:109017-109036 Msa1374770:intron 35.0%
ACAACCTTCTTCCACTATAT+GGG - tig0019570:109049-109068 None:intergenic 35.0%
AACAACCTTCTTCCACTATA+TGG - tig0019570:109050-109069 None:intergenic 35.0%
GTTAACCATTTCTGTTTAGG+TGG + tig0019570:109757-109776 Msa1374770:intron 35.0%
GATTTCCACCTAAACAGAAA+TGG - tig0019570:109765-109784 None:intergenic 35.0%
AGATTACTAACAACCAAGAG+TGG - tig0019570:109848-109867 None:intergenic 35.0%
TAAATCTTTCCAGTCCCTAT+TGG + tig0019570:109898-109917 Msa1374770:CDS 35.0%
AATCACGCCATTATCCAATA+GGG - tig0019570:109915-109934 None:intergenic 35.0%
TCAGTATTTGTTTGGCAAAG+AGG + tig0019570:109985-110004 Msa1374770:CDS 35.0%
CAGTATTTGTTTGGCAAAGA+GGG + tig0019570:109986-110005 Msa1374770:CDS 35.0%
GTCTTTGTGGATAAAACAGT+TGG - tig0019570:110201-110220 None:intergenic 35.0%
ACAATGACATCTGATTGTCT+TGG + tig0019570:110232-110251 Msa1374770:CDS 35.0%
TGTTCAGATCTGAGCATATA+AGG + tig0019570:110401-110420 Msa1374770:CDS 35.0%
! TGCAAATTTGCTCCAACAAA+TGG - tig0019570:110553-110572 None:intergenic 35.0%
! CTTTTGAACATAACCCCTTT+CGG - tig0019570:110644-110663 None:intergenic 35.0%
AGAACTTATCTCCAAGAACT+GGG - tig0019570:110987-111006 None:intergenic 35.0%
AATTTCCCCTTCACAAAACA+AGG + tig0019570:111057-111076 Msa1374770:CDS 35.0%
!!! ACAATGCCTTGTTTTGTGAA+GGG - tig0019570:111066-111085 None:intergenic 35.0%
!!! AACAATGCCTTGTTTTGTGA+AGG - tig0019570:111067-111086 None:intergenic 35.0%
ACTGAACTGTGTCAAAAGTT+CGG - tig0019570:111381-111400 None:intergenic 35.0%
!! TGAACTGAACTTTAAGTTGG+CGG - tig0019570:111437-111456 None:intergenic 35.0%
! CTAACATGCTTTCAAGCTTT+TGG - tig0019570:111580-111599 None:intergenic 35.0%
! CAAAAGCTTGAAAGCATGTT+AGG + tig0019570:111578-111597 Msa1374770:intron 35.0%
!! TTCAGGCTCGCTTTAAAAAT+AGG + tig0019570:111710-111729 Msa1374770:intron 35.0%
! CCTGAATTTGACTTTGTCTT+CGG - tig0019570:111926-111945 None:intergenic 35.0%
AAAGTCAAATTCAGGAACAC+CGG + tig0019570:111931-111950 Msa1374770:CDS 35.0%
GACAATAACTTTGCTCCATA+TGG - tig0019570:112237-112256 None:intergenic 35.0%
! GTATATATCAGTTTGGTTCC+TGG + tig0019570:112372-112391 Msa1374770:three_prime_UTR 35.0%
ATGTTTCCTTGATACCAGTT+AGG + tig0019570:112395-112414 Msa1374770:three_prime_UTR 35.0%
ATTACTCCTAACTGGTATCA+AGG - tig0019570:112404-112423 None:intergenic 35.0%
ATAAGTGGAATGCTCATATC+CGG + tig0019570:112490-112509 Msa1374770:three_prime_UTR 35.0%
!!! ATTCGTTAGTTTTTTGGGAG+AGG - tig0019570:112521-112540 None:intergenic 35.0%
CCCAAAAAACTAACGAATGA+TGG + tig0019570:112523-112542 Msa1374770:three_prime_UTR 35.0%
!!! CCCATCATTCGTTAGTTTTT+TGG - tig0019570:112527-112546 None:intergenic 35.0%
CATTTCCGCAAAAACTCACA+AGG + tig0019570:105506-105525 Msa1374770:intron 40.0%
! CGCAAAAACTCACAAGGTTT+TGG + tig0019570:105512-105531 Msa1374770:intron 40.0%
! GGTTTATGGAGAAAGGGTTT+TGG - tig0019570:105622-105641 None:intergenic 40.0%
TCAACCACAATGGAACACAT+AGG + tig0019570:105657-105676 Msa1374770:exon 40.0%
TGAACCTATGTGTTCCATTG+TGG - tig0019570:105664-105683 None:intergenic 40.0%
CAACACCAACTACACAGAAA+TGG + tig0019570:105698-105717 Msa1374770:CDS 40.0%
! GTATTGGTCGAAGAACATGA+CGG - tig0019570:105817-105836 None:intergenic 40.0%
GTCATGTTCTTCGACCAATA+CGG + tig0019570:105816-105835 Msa1374770:CDS 40.0%
GGTGACTGATTAAACCGTAT+TGG - tig0019570:105833-105852 None:intergenic 40.0%
TCATCAGCACCTTTCTTAGA+AGG - tig0019570:105945-105964 None:intergenic 40.0%
CGTTATGCTACGGTTAAGTT+TGG + tig0019570:105972-105991 Msa1374770:CDS 40.0%
!! CTAAGTTTTGGTGTGGTGAA+GGG + tig0019570:106015-106034 Msa1374770:CDS 40.0%
!! GAAAGTTGATGTTCACATCC+AGG + tig0019570:106106-106125 Msa1374770:CDS 40.0%
GGACTGTGTGTGTTAATTTC+AGG + tig0019570:106325-106344 Msa1374770:intron 40.0%
ATATTAAAGGGGAGGATACG+AGG + tig0019570:106414-106433 Msa1374770:CDS 40.0%
TATTAAAGGGGAGGATACGA+GGG + tig0019570:106415-106434 Msa1374770:CDS 40.0%
AGATCAGACTTGACCATAAC+AGG - tig0019570:106461-106480 None:intergenic 40.0%
TGGATGAGTGAAACTGAGAA+AGG + tig0019570:106485-106504 Msa1374770:CDS 40.0%
GGTGATTGTGAATTTGACCA+CGG + tig0019570:106506-106525 Msa1374770:CDS 40.0%
! GGAGGCTACTTTCTGATTAA+GGG + tig0019570:106527-106546 Msa1374770:CDS 40.0%
!! TCTGATTAAGGGTGCTGAAA+AGG + tig0019570:106538-106557 Msa1374770:CDS 40.0%
GTGTTATCCAATGGCAGTTA+TGG + tig0019570:106765-106784 Msa1374770:intron 40.0%
TTGACCACCATTTACCACAT+CGG - tig0019570:106819-106838 None:intergenic 40.0%
GCCATAAATGTACCACAAAG+TGG + tig0019570:106855-106874 Msa1374770:CDS 40.0%
!! CTGCAATTTTGACCACTTTG+TGG - tig0019570:106870-106889 None:intergenic 40.0%
AATGCGCTGCGTTAAAATGT+AGG - tig0019570:107026-107045 None:intergenic 40.0%
AGTCGCAGATGAAGAGAAAT+AGG + tig0019570:107204-107223 Msa1374770:CDS 40.0%
GCAGATGAAGAGAAATAGGA+TGG + tig0019570:107208-107227 Msa1374770:CDS 40.0%
TAAATTGGTGGAAGGTTCGA+CGG + tig0019570:107235-107254 Msa1374770:CDS 40.0%
! TGATCTCATCGATTATGGAG+AGG + tig0019570:107367-107386 Msa1374770:CDS 40.0%
! GAACGCTCTTCTTTTCTTAG+AGG + tig0019570:107469-107488 Msa1374770:CDS 40.0%
! GTATCTAGCTTACATGGTGA+AGG + tig0019570:107592-107611 Msa1374770:CDS 40.0%
!! CCCTGTTATCAGTTTTTCGA+CGG - tig0019570:107640-107659 None:intergenic 40.0%
CCGTCGAAAAACTGATAACA+GGG + tig0019570:107637-107656 Msa1374770:CDS 40.0%
GAACTTCTCGTTCTCCATAA+AGG - tig0019570:107772-107791 None:intergenic 40.0%
CTTGGACACATCCTTTCAAA+AGG + tig0019570:107861-107880 Msa1374770:CDS 40.0%
GACACATCCTTTCAAAAGGA+TGG + tig0019570:107865-107884 Msa1374770:CDS 40.0%
!! AGCCATGGTTTGTAATGGAT+TGG - tig0019570:107927-107946 None:intergenic 40.0%
ACAAGTTCAGTACACAGGAA+AGG + tig0019570:107967-107986 Msa1374770:CDS 40.0%
TATCCTAGCTGACTGAATGA+AGG + tig0019570:108068-108087 Msa1374770:intron 40.0%
TAACCTTCATTCAGTCAGCT+AGG - tig0019570:108074-108093 None:intergenic 40.0%
!! AACCGTGAGTTTTAATGACC+AGG - tig0019570:108211-108230 None:intergenic 40.0%
! GACTAGATGCCGAGTTTTTA+TGG + tig0019570:108265-108284 Msa1374770:intron 40.0%
! TAGATGCCGAGTTTTTATGG+TGG + tig0019570:108268-108287 Msa1374770:intron 40.0%
AGATGGCCACCATAAAAACT+CGG - tig0019570:108277-108296 None:intergenic 40.0%
CATTTACATCCCCTCAATGA+AGG - tig0019570:108343-108362 None:intergenic 40.0%
GATCAATCCCTGAAAAGGTT+GGG - tig0019570:108479-108498 None:intergenic 40.0%
AGATCAATCCCTGAAAAGGT+TGG - tig0019570:108480-108499 None:intergenic 40.0%
GACTAGATCAATCCCTGAAA+AGG - tig0019570:108484-108503 None:intergenic 40.0%
! TCCACAATTTTCACCATCTG+GGG - tig0019570:108705-108724 None:intergenic 40.0%
! GTCCACAATTTTCACCATCT+GGG - tig0019570:108706-108725 None:intergenic 40.0%
! AGTCCACAATTTTCACCATC+TGG - tig0019570:108707-108726 None:intergenic 40.0%
GTAAAAAATTTGGCTGCCAC+AGG + tig0019570:108728-108747 Msa1374770:CDS 40.0%
ATCAAACAGCTGAGGAAGTA+TGG - tig0019570:108780-108799 None:intergenic 40.0%
TTCCTCAGCTGTTTGATTGT+GGG + tig0019570:108783-108802 Msa1374770:CDS 40.0%
! AAGTTTTCCTAAATGGGGAC+TGG + tig0019570:108855-108874 Msa1374770:CDS 40.0%
! AGTTTTCCTAAATGGGGACT+GGG + tig0019570:108856-108875 Msa1374770:CDS 40.0%
! TAGCTCTGCCACAAATGATA+TGG - tig0019570:108900-108919 None:intergenic 40.0%
! AGAACCCATATAGTGGAAGA+AGG + tig0019570:109042-109061 Msa1374770:intron 40.0%
AGGTAGTGTACATAGAGACA+TGG - tig0019570:109292-109311 None:intergenic 40.0%
CACTTCACTATTCTAGTGCA+AGG - tig0019570:109536-109555 None:intergenic 40.0%
GCATATTATCTGATGCAGGA+AGG + tig0019570:109813-109832 Msa1374770:CDS 40.0%
TACTAACAACCAAGAGTGGA+CGG - tig0019570:109844-109863 None:intergenic 40.0%
TTCCAGTCCCTATTGGATAA+TGG + tig0019570:109905-109924 Msa1374770:CDS 40.0%
CAATCACGCCATTATCCAAT+AGG - tig0019570:109916-109935 None:intergenic 40.0%
TTGAAGTCCTCTTCTTCTTC+AGG - tig0019570:109950-109969 None:intergenic 40.0%
! TGGGGTGTTCAGTATTTGTT+TGG + tig0019570:109977-109996 Msa1374770:CDS 40.0%
! GCATGGTCATGATTTGCAAA+TGG - tig0019570:110085-110104 None:intergenic 40.0%
TTGCAAATCATGACCATGCT+AGG + tig0019570:110086-110105 Msa1374770:CDS 40.0%
AAGCATTCTTCTCAGGCTAT+TGG + tig0019570:110130-110149 Msa1374770:CDS 40.0%
GATGTCATTGTCTGAAAGAG+TGG - tig0019570:110223-110242 None:intergenic 40.0%
TCTGATTGTCTTGGAAAACC+TGG + tig0019570:110241-110260 Msa1374770:CDS 40.0%
CTTGGAAAACCTGGATATCT+TGG + tig0019570:110250-110269 Msa1374770:CDS 40.0%
TTACTCTGACCAAGATATCC+AGG - tig0019570:110262-110281 None:intergenic 40.0%
! TAATGGGCAGAATGCAATTG+TGG + tig0019570:110306-110325 Msa1374770:CDS 40.0%
CATCATCAAGGCTATCAACT+CGG - tig0019570:110522-110541 None:intergenic 40.0%
!! GTTGATAGCCTTGATGATGA+TGG + tig0019570:110523-110542 Msa1374770:CDS 40.0%
ATGGAAAGCCATCATCATCA+AGG - tig0019570:110534-110553 None:intergenic 40.0%
! GATGATGGCTTTCCATTTGT+TGG + tig0019570:110538-110557 Msa1374770:CDS 40.0%
GTTGGAGCAAATTTGCAAAG+TGG + tig0019570:110556-110575 Msa1374770:CDS 40.0%
TAAAGCTAAAGCACACCGAA+AGG + tig0019570:110626-110645 Msa1374770:CDS 40.0%
AAAGCTAAAGCACACCGAAA+GGG + tig0019570:110627-110646 Msa1374770:CDS 40.0%
CGAAAGGGGTTATGTTCAAA+AGG + tig0019570:110642-110661 Msa1374770:CDS 40.0%
GTTTGTTCGTAATCTGCACA+TGG + tig0019570:110856-110875 Msa1374770:intron 40.0%
AGCGGTCAAATACAACTTAG+AGG - tig0019570:110925-110944 None:intergenic 40.0%
GAGAACTTATCTCCAAGAAC+TGG - tig0019570:110988-111007 None:intergenic 40.0%
GATAAGTTCTCCAGTATGCA+TGG + tig0019570:110997-111016 Msa1374770:CDS 40.0%
!!! CAATGCCTTGTTTTGTGAAG+GGG - tig0019570:111065-111084 None:intergenic 40.0%
TGGAAGATTACCTATGAAGC+TGG - tig0019570:111239-111258 None:intergenic 40.0%
TTCAAGCTCTTTCCCAAACT+GGG - tig0019570:111473-111492 None:intergenic 40.0%
TTTCAAGCTCTTTCCCAAAC+TGG - tig0019570:111474-111493 None:intergenic 40.0%
TGGGAAAGAGCTTGAAATAC+CGG + tig0019570:111477-111496 Msa1374770:intron 40.0%
ACGCTAGCACTATTAAGCAT+CGG - tig0019570:111506-111525 None:intergenic 40.0%
! ATGTGGATTGCATTAGCTTC+AGG + tig0019570:111693-111712 Msa1374770:intron 40.0%
GTCCGATCGCTGATATTTAT+GGG + tig0019570:111868-111887 Msa1374770:CDS 40.0%
CCGAAGACAAAGTCAAATTC+AGG + tig0019570:111923-111942 Msa1374770:CDS 40.0%
!! CGATTTGGAGGTATCAAGTT+TGG + tig0019570:111997-112016 Msa1374770:CDS 40.0%
! AGGTATCAAGTTTGGTGAGA+TGG + tig0019570:112005-112024 Msa1374770:CDS 40.0%
! TATCTGAGACGAATCACTCA+GGG - tig0019570:112088-112107 None:intergenic 40.0%
TGGAGCAAAGTTATTGTCTC+AGG + tig0019570:112239-112258 Msa1374770:CDS 40.0%
!! AAAGAAATGCAAGGGCATTC+AGG - tig0019570:112449-112468 None:intergenic 40.0%
TAAGTGGAATGCTCATATCC+GGG + tig0019570:112491-112510 Msa1374770:three_prime_UTR 40.0%
ATTGATCTTCATCGTCGTCG+AGG - tig0019570:105731-105750 None:intergenic 45.0%
ACCGAGTTCGTTGAGGATTT+CGG - tig0019570:105760-105779 None:intergenic 45.0%
TATCATCACCGAGTTCGTTG+AGG - tig0019570:105767-105786 None:intergenic 45.0%
! CAACGAACTCGGTGATGATA+TGG + tig0019570:105767-105786 Msa1374770:CDS 45.0%
ATCACCGAAGGAATCGAAAG+CGG - tig0019570:105898-105917 None:intergenic 45.0%
TGCTACGGTTAAGTTTGGGA+AGG + tig0019570:105977-105996 Msa1374770:CDS 45.0%
CCTTCACCACACCAAAACTT+AGG - tig0019570:106017-106036 None:intergenic 45.0%
!! CCTAAGTTTTGGTGTGGTGA+AGG + tig0019570:106014-106033 Msa1374770:CDS 45.0%
ATAAGTCATCCTCTGCAACC+TGG - tig0019570:106075-106094 None:intergenic 45.0%
TATTGGGAGACTGCCTGTTA+TGG + tig0019570:106445-106464 Msa1374770:CDS 45.0%
TGGTCAAGTCTGATCTGTGT+TGG + tig0019570:106465-106484 Msa1374770:CDS 45.0%
GATTGTGAATTTGACCACGG+AGG + tig0019570:106509-106528 Msa1374770:CDS 45.0%
TAATCAGAAAGTAGCCTCCG+TGG - tig0019570:106526-106545 None:intergenic 45.0%
! CGGAGGCTACTTTCTGATTA+AGG + tig0019570:106526-106545 Msa1374770:CDS 45.0%
GGTCAAAATCTGCCACCAAT+AGG - tig0019570:106793-106812 None:intergenic 45.0%
TTGAAAGCAACAGCCCAGTA+TGG - tig0019570:107185-107204 None:intergenic 45.0%
TGTCTGTCGAGATACCTGTA+TGG + tig0019570:107300-107319 Msa1374770:CDS 45.0%
ATCGATTATGGAGAGGCAGA+TGG + tig0019570:107374-107393 Msa1374770:CDS 45.0%
CACATTTATCGTCTGCCTCA+CGG - tig0019570:107430-107449 None:intergenic 45.0%
CACTCGTCAATAGATTCTGC+GGG - tig0019570:107521-107540 None:intergenic 45.0%
GCACTCGTCAATAGATTCTG+CGG - tig0019570:107522-107541 None:intergenic 45.0%
! GGCAAGGTATCTAGCTTACA+TGG + tig0019570:107586-107605 Msa1374770:CDS 45.0%
GCCGTCGAAAAACTGATAAC+AGG + tig0019570:107636-107655 Msa1374770:CDS 45.0%
! GGGACGATTTTCGAAACAAG+AGG + tig0019570:107657-107676 Msa1374770:CDS 45.0%
AACAAGAGGCTTGAGTTAGC+TGG + tig0019570:107671-107690 Msa1374770:CDS 45.0%
AAGTGCACTTTGCACATGCT+AGG + tig0019570:107717-107736 Msa1374770:CDS 45.0%
TCCATAAAGGTCTCTCTGCA+GGG - tig0019570:107759-107778 None:intergenic 45.0%
!!! CTCCAAAGAGCGTTTTCTAC+TGG + tig0019570:107836-107855 Msa1374770:CDS 45.0%
CTCCAGTAGAAAACGCTCTT+TGG - tig0019570:107841-107860 None:intergenic 45.0%
!! GATGGAAAGGATTTCTGGTG+TGG + tig0019570:107883-107902 Msa1374770:CDS 45.0%
AGGCAACAAGTTCAGTACAC+AGG + tig0019570:107962-107981 Msa1374770:CDS 45.0%
GTTCAGTACACAGGAAAGGT+CGG + tig0019570:107971-107990 Msa1374770:CDS 45.0%
TTCAGTACACAGGAAAGGTC+GGG + tig0019570:107972-107991 Msa1374770:CDS 45.0%
TCTGTAATGCGCCTTCATTG+AGG + tig0019570:108329-108348 Msa1374770:intron 45.0%
CTGTAATGCGCCTTCATTGA+GGG + tig0019570:108330-108349 Msa1374770:intron 45.0%
TGTAATGCGCCTTCATTGAG+GGG + tig0019570:108331-108350 Msa1374770:intron 45.0%
! ATCAACGTCCCAACCTTTTC+AGG + tig0019570:108468-108487 Msa1374770:intron 45.0%
! TCAACGTCCCAACCTTTTCA+GGG + tig0019570:108469-108488 Msa1374770:intron 45.0%
TCAGGGATTGATCTAGTCTC+TGG + tig0019570:108486-108505 Msa1374770:intron 45.0%
! TGTTTTCTTTCCACCCCAGA+TGG + tig0019570:108689-108708 Msa1374770:CDS 45.0%
! ACAATTTTCACCATCTGGGG+TGG - tig0019570:108702-108721 None:intergenic 45.0%
ACCCCAGATGGTGAAAATTG+TGG + tig0019570:108701-108720 Msa1374770:CDS 45.0%
ATCGGTACTTACTACTCCTG+TGG - tig0019570:108747-108766 None:intergenic 45.0%
CTTCCTCAGCTGTTTGATTG+TGG + tig0019570:108782-108801 Msa1374770:CDS 45.0%
ATCCCACAATCAAACAGCTG+AGG - tig0019570:108788-108807 None:intergenic 45.0%
TCAGCTGTTTGATTGTGGGA+TGG + tig0019570:108787-108806 Msa1374770:CDS 45.0%
CAGAGCTACGAACTAGAAGA+CGG + tig0019570:108912-108931 Msa1374770:CDS 45.0%
CATGGAGAGAACCCATATAG+TGG + tig0019570:109035-109054 Msa1374770:intron 45.0%
! TAAGTGACAGCGTTTTGCAG+AGG - tig0019570:109312-109331 None:intergenic 45.0%
CCAATCTTTGACAGAGGAGA+GGG - tig0019570:109340-109359 None:intergenic 45.0%
ACCAATCTTTGACAGAGGAG+AGG - tig0019570:109341-109360 None:intergenic 45.0%
ACAACTCACAAGGGGAAAGT+GGG - tig0019570:109511-109530 None:intergenic 45.0%
TGCAAGGTCACAACTCACAA+GGG - tig0019570:109520-109539 None:intergenic 45.0%
GTGCGCATATTATCTGATGC+AGG + tig0019570:109809-109828 Msa1374770:CDS 45.0%
AATGGCGTGATTGAGCTGAT+TGG + tig0019570:109923-109942 Msa1374770:CDS 45.0%
! GATTGGTCCTGAAGAAGAAG+AGG + tig0019570:109940-109959 Msa1374770:CDS 45.0%
AAGAGGACTTCAAGACTGCT+TGG + tig0019570:109957-109976 Msa1374770:CDS 45.0%
AGAGGACTTCAAGACTGCTT+GGG + tig0019570:109958-109977 Msa1374770:CDS 45.0%
!! GAGAAGAATGCTTCTGGGAT+TGG - tig0019570:110123-110142 None:intergenic 45.0%
!! ATCCCAGAAGCATTCTTCTC+AGG + tig0019570:110123-110142 Msa1374770:CDS 45.0%
AGCCTGAGAAGAATGCTTCT+GGG - tig0019570:110128-110147 None:intergenic 45.0%
TAGCCTGAGAAGAATGCTTC+TGG - tig0019570:110129-110148 None:intergenic 45.0%
GTCTGAAAGAGTGGTCTTTG+TGG - tig0019570:110214-110233 None:intergenic 45.0%
GTGGTGATATTATCATCGGG+CGG + tig0019570:110575-110594 Msa1374770:CDS 45.0%
CTTTATACTATGGTCCGTCC+CGG - tig0019570:110611-110630 None:intergenic 45.0%
AAGCTAAAGCACACCGAAAG+GGG + tig0019570:110628-110647 Msa1374770:CDS 45.0%
TGTGCTGTCTTCGAATGATG+AGG + tig0019570:110666-110685 Msa1374770:CDS 45.0%
GTGCTGTCTTCGAATGATGA+GGG + tig0019570:110667-110686 Msa1374770:CDS 45.0%
TGCTGTCTTCGAATGATGAG+GGG + tig0019570:110668-110687 Msa1374770:CDS 45.0%
TCCAGTATGCATGGACAGAA+GGG + tig0019570:111006-111025 Msa1374770:CDS 45.0%
!!! CATGGACAGAAGGGTGTTTT+GGG + tig0019570:111015-111034 Msa1374770:CDS 45.0%
!!! GAAGGGTGTTTTGGGATTTC+TGG + tig0019570:111023-111042 Msa1374770:CDS 45.0%
!! TTTGGGATTTCTGGAGTCTC+AGG + tig0019570:111032-111051 Msa1374770:CDS 45.0%
AACTCCTGGACAACTACTAG+AGG + tig0019570:111128-111147 Msa1374770:CDS 45.0%
ACAACTACTAGAGGCTGCTT+TGG + tig0019570:111137-111156 Msa1374770:CDS 45.0%
! CAACTACTAGAGGCTGCTTT+GGG + tig0019570:111138-111157 Msa1374770:CDS 45.0%
TCAACAGAGGAAGTGGAGAA+AGG - tig0019570:111204-111223 None:intergenic 45.0%
AATGGCTTCAACAGAGGAAG+TGG - tig0019570:111211-111230 None:intergenic 45.0%
GTCAGTAATGGCTTCAACAG+AGG - tig0019570:111217-111236 None:intergenic 45.0%
CCTATGAAGCTGGTCAGTAA+TGG - tig0019570:111229-111248 None:intergenic 45.0%
CCATTACTGACCAGCTTCAT+AGG + tig0019570:111226-111245 Msa1374770:CDS 45.0%
GATCAGTGCAGTGCATAGTT+CGG - tig0019570:111343-111362 None:intergenic 45.0%
! AGTTCGGCTCTTTTCCAGTT+CGG - tig0019570:111365-111384 None:intergenic 45.0%
!! CACTATTAAGCATCGGTCAC+CGG - tig0019570:111499-111518 None:intergenic 45.0%
! GGAACTGGAAAGAGCATGTT+AGG + tig0019570:111640-111659 Msa1374770:intron 45.0%
!!! ACAGAGCTGGCTTTTCAAGA+TGG + tig0019570:111806-111825 Msa1374770:intron 45.0%
!!! CAGAGCTGGCTTTTCAAGAT+GGG + tig0019570:111807-111826 Msa1374770:intron 45.0%
!!! AGAGCTGGCTTTTCAAGATG+GGG + tig0019570:111808-111827 Msa1374770:intron 45.0%
GGGAACGAACGAGTATACAA+CGG + tig0019570:111829-111848 Msa1374770:CDS 45.0%
ACGAACGAGTATACAACGGA+AGG + tig0019570:111833-111852 Msa1374770:CDS 45.0%
GGTCCGATCGCTGATATTTA+TGG + tig0019570:111867-111886 Msa1374770:CDS 45.0%
GGCCCATAAATATCAGCGAT+CGG - tig0019570:111873-111892 None:intergenic 45.0%
GCAGTCTCTGGTAGAATGTT+GGG - tig0019570:111894-111913 None:intergenic 45.0%
TGCAGTCTCTGGTAGAATGT+TGG - tig0019570:111895-111914 None:intergenic 45.0%
TGACTTTGTCTTCGGACATG+TGG - tig0019570:111918-111937 None:intergenic 45.0%
! GTATCTGAGACGAATCACTC+AGG - tig0019570:112089-112108 None:intergenic 45.0%
TGCAAATGTGATCTTGCGAC+CGG + tig0019570:112134-112153 Msa1374770:CDS 45.0%
GATTCACAGAAACGGCAGTA+GGG - tig0019570:112186-112205 None:intergenic 45.0%
TGATTCACAGAAACGGCAGT+AGG - tig0019570:112187-112206 None:intergenic 45.0%
! CATCGGCTGATTCACAGAAA+CGG - tig0019570:112194-112213 None:intergenic 45.0%
TGAATCAGCCGATGACATTG+TGG + tig0019570:112200-112219 Msa1374770:CDS 45.0%
CTTTGCTCCATATGGAACAC+TGG - tig0019570:112229-112248 None:intergenic 45.0%
CTGGTATCAAGGAAACATCC+AGG - tig0019570:112393-112412 None:intergenic 45.0%
TTCGTTGAGGATTTCGGCGT+TGG - tig0019570:105754-105773 None:intergenic 50.0%
GCCGAAATCCTCAACGAACT+CGG + tig0019570:105756-105775 Msa1374770:CDS 50.0%
! CAAGCCGCTTTCGATTCCTT+CGG + tig0019570:105891-105910 Msa1374770:CDS 50.0%
CGTAACAGTGAGATCACCGA+AGG - tig0019570:105910-105929 None:intergenic 50.0%
! CGCTTGAGCGACCTAAGTTT+TGG + tig0019570:106003-106022 Msa1374770:CDS 50.0%
!! GAGCGACCTAAGTTTTGGTG+TGG + tig0019570:106008-106027 Msa1374770:CDS 50.0%
ATAGGCGCCATAACTGCCAT+TGG - tig0019570:106775-106794 None:intergenic 50.0%
ATGGCAGTTATGGCGCCTAT+TGG + tig0019570:106775-106794 Msa1374770:intron 50.0%
!! AGATTTTGACCACGCCGATG+TGG + tig0019570:106802-106821 Msa1374770:CDS 50.0%
TCGACGGAGGGAATTACACA+TGG + tig0019570:107251-107270 Msa1374770:CDS 50.0%
TCTCTTTGCATCCATCCGTG+AGG + tig0019570:107412-107431 Msa1374770:CDS 50.0%
TTTATCGTCTGCCTCACGGA+TGG - tig0019570:107426-107445 None:intergenic 50.0%
TCGTCAATAGATTCTGCGGG+TGG - tig0019570:107518-107537 None:intergenic 50.0%
TGCACATGCTAGGAAGCGAA+TGG + tig0019570:107727-107746 Msa1374770:CDS 50.0%
GCACATGCTAGGAAGCGAAT+GGG + tig0019570:107728-107747 Msa1374770:CDS 50.0%
CACATGCTAGGAAGCGAATG+GGG + tig0019570:107729-107748 Msa1374770:CDS 50.0%
CTCCATAAAGGTCTCTCTGC+AGG - tig0019570:107760-107779 None:intergenic 50.0%
! GAGCGTTTTCTACTGGAGCT+TGG + tig0019570:107843-107862 Msa1374770:CDS 50.0%
TCTGGTGTGGTTGCAACTCT+TGG + tig0019570:107896-107915 Msa1374770:CDS 50.0%
CTGGTGTGGTTGCAACTCTT+GGG + tig0019570:107897-107916 Msa1374770:CDS 50.0%
TCAGTACACAGGAAAGGTCG+GGG + tig0019570:107973-107992 Msa1374770:CDS 50.0%
ACTCGGCATCTAGTCTACAC+AGG - tig0019570:108260-108279 None:intergenic 50.0%
TTGCAGGCATCCTTCTCACT+GGG + tig0019570:108658-108677 Msa1374770:intron 50.0%
CAAACCTTACCCCAGTGAGA+AGG - tig0019570:108671-108690 None:intergenic 50.0%
TTCCTAAATGGGGACTGGGT+TGG + tig0019570:108860-108879 Msa1374770:CDS 50.0%
AGCTACGAACTAGAAGACGG+AGG + tig0019570:108915-108934 Msa1374770:CDS 50.0%
GAGGAATGAGTTGCCTCATC+AGG + tig0019570:108934-108953 Msa1374770:CDS 50.0%
CCCTCTCCTCTGTCAAAGAT+TGG + tig0019570:109337-109356 Msa1374770:intron 50.0%
CACAACTCACAAGGGGAAAG+TGG - tig0019570:109512-109531 None:intergenic 50.0%
GCAAGGTCACAACTCACAAG+GGG - tig0019570:109519-109538 None:intergenic 50.0%
GTGCAAGGTCACAACTCACA+AGG - tig0019570:109521-109540 None:intergenic 50.0%
AAGGATTCTCCGTCCACTCT+TGG + tig0019570:109832-109851 Msa1374770:CDS 50.0%
CGCCATTATCCAATAGGGAC+TGG - tig0019570:109910-109929 None:intergenic 50.0%
GAGGACTTCAAGACTGCTTG+GGG + tig0019570:109959-109978 Msa1374770:CDS 50.0%
GGTACAACACTCTCCTAGCA+TGG - tig0019570:110102-110121 None:intergenic 50.0%
GTGGCTGTCAATGTGCATCT+CGG + tig0019570:110325-110344 Msa1374770:CDS 50.0%
CGAAGCACGGTTCATAACCA+AGG - tig0019570:110368-110387 None:intergenic 50.0%
!! TGCTGTTGTTTCGCTGAGAC+AGG + tig0019570:110699-110718 Msa1374770:CDS 50.0%
CTCCAGTATGCATGGACAGA+AGG + tig0019570:111005-111024 Msa1374770:CDS 50.0%
ACCCTTCTGTCCATGCATAC+TGG - tig0019570:111010-111029 None:intergenic 50.0%
!!! GCATGGACAGAAGGGTGTTT+TGG + tig0019570:111014-111033 Msa1374770:CDS 50.0%
TGTCGCGAAGGAAATGCATG+TGG - tig0019570:111108-111127 None:intergenic 50.0%
TTTCCTTCGCGACAAACTCC+TGG + tig0019570:111114-111133 Msa1374770:CDS 50.0%
!! ACTAGAGGCTGCTTTGGGAA+AGG + tig0019570:111143-111162 Msa1374770:CDS 50.0%
!! CTAGAGGCTGCTTTGGGAAA+GGG + tig0019570:111144-111163 Msa1374770:CDS 50.0%
!! TCGCTTGTGTTGGTTCACTG+AGG + tig0019570:111169-111188 Msa1374770:CDS 50.0%
CTCAATCGCGTCTCATTGCT+AGG + tig0019570:111552-111571 Msa1374770:intron 50.0%
!!! GAGCTGGCTTTTCAAGATGG+GGG + tig0019570:111809-111828 Msa1374770:intron 50.0%
CGAGTATACAACGGAAGGAC+CGG + tig0019570:111838-111857 Msa1374770:CDS 50.0%
CGTGATTGCCTGATAGCTCA+TGG + tig0019570:112030-112049 Msa1374770:CDS 50.0%
! CTGAAGCACCATGAGCTATC+AGG - tig0019570:112041-112060 None:intergenic 50.0%
ACGAATCACTCAGGGTGAAG+AGG - tig0019570:112080-112099 None:intergenic 50.0%
AGTAGGGACCTCGAATCTTC+CGG - tig0019570:112170-112189 None:intergenic 50.0%
ATCAGCCGATGACATTGTGG+TGG + tig0019570:112203-112222 Msa1374770:CDS 50.0%
ACTGGCCACCACAATGTCAT+CGG - tig0019570:112211-112230 None:intergenic 50.0%
TCTCAGGAGCTGTTCAGCAT+GGG + tig0019570:112255-112274 Msa1374770:CDS 50.0%
!! CAAGGGCATTCAGGCAAATC+AGG - tig0019570:112440-112459 None:intergenic 50.0%
!!! TTTTTTGGGAGAGGAGCTCC+CGG - tig0019570:112512-112531 None:intergenic 50.0%
GGTGATCTCACTGTTACGCC+TGG + tig0019570:105912-105931 Msa1374770:CDS 55.0%
AGATGCTTCCCAGACATGCC+AGG + tig0019570:106054-106073 Msa1374770:CDS 55.0%
CTCTGCAACCTGGCATGTCT+GGG - tig0019570:106065-106084 None:intergenic 55.0%
GCAGTTATGGCGCCTATTGG+TGG + tig0019570:106778-106797 Msa1374770:intron 55.0%
GACCACGCCGATGTGGTAAA+TGG + tig0019570:106809-106828 Msa1374770:CDS 55.0%
CACCATTTACCACATCGGCG+TGG - tig0019570:106814-106833 None:intergenic 55.0%
CACGCCGATGTGGTAAATGG+TGG + tig0019570:106812-106831 Msa1374770:CDS 55.0%
ATTGGTGGAAGGTTCGACGG+AGG + tig0019570:107238-107257 Msa1374770:CDS 55.0%
TTGGTGGAAGGTTCGACGGA+GGG + tig0019570:107239-107258 Msa1374770:CDS 55.0%
TGAGTTAGCTGGTGAGCTGC+TGG + tig0019570:107682-107701 Msa1374770:CDS 55.0%
TGCTAGGAAGCGAATGGGGA+AGG + tig0019570:107733-107752 Msa1374770:CDS 55.0%
GCCCTGCAGAGAGACCTTTA+TGG + tig0019570:107755-107774 Msa1374770:CDS 55.0%
GTTGCAGGCATCCTTCTCAC+TGG + tig0019570:108657-108676 Msa1374770:intron 55.0%
TGCAGGCATCCTTCTCACTG+GGG + tig0019570:108659-108678 Msa1374770:intron 55.0%
GCATCCTTCTCACTGGGGTA+AGG + tig0019570:108664-108683 Msa1374770:CDS 55.0%
CTCCAACCCAGTCCCCATTT+AGG - tig0019570:108865-108884 None:intergenic 55.0%
CAGGTTAGGAGCCCAGTTCT+TGG + tig0019570:110973-110992 Msa1374770:intron 55.0%
TGTCCAGGAGTTTGTCGCGA+AGG - tig0019570:111120-111139 None:intergenic 55.0%
GCAGCCTCTAGTAGTTGTCC+AGG - tig0019570:111135-111154 None:intergenic 55.0%
!! GGAAAGGGCATCGCTTGTGT+TGG + tig0019570:111159-111178 Msa1374770:CDS 55.0%
! TGCACTGCACTGATCCGAAC+TGG + tig0019570:111348-111367 Msa1374770:intron 55.0%
GTAGATCCAGGCTCGCTTTC+AGG + tig0019570:111612-111631 Msa1374770:intron 55.0%
CAGGCTCGCTTTCAGGCTTT+CGG + tig0019570:111619-111638 Msa1374770:intron 55.0%
CGCTTTCAGGCTTTCGGAAC+TGG + tig0019570:111625-111644 Msa1374770:intron 55.0%
AATCGCTTCCTGTCAGCGAC+AGG - tig0019570:111982-112001 None:intergenic 55.0%
GTCGCTGACAGGAAGCGATT+TGG + tig0019570:111982-112001 Msa1374770:CDS 55.0%
! GCTGACAGGAAGCGATTTGG+AGG + tig0019570:111985-112004 Msa1374770:CDS 55.0%
GTGATCTTGCGACCGGTATC+TGG + tig0019570:112141-112160 Msa1374770:CDS 55.0%
ATCTTGCGACCGGTATCTGG+TGG + tig0019570:112144-112163 Msa1374770:CDS 55.0%
ATCTTCCGGCCACCAGATAC+CGG - tig0019570:112156-112175 None:intergenic 55.0%
GTGGTGGCCAGTGTTCCATA+TGG + tig0019570:112219-112238 Msa1374770:CDS 55.0%
GTCTCAGGAGCTGTTCAGCA+TGG + tig0019570:112254-112273 Msa1374770:CDS 55.0%
CCTCTGCAACCTGGCATGTC+TGG - tig0019570:106066-106085 None:intergenic 60.0%
CCAGACATGCCAGGTTGCAG+AGG + tig0019570:106063-106082 Msa1374770:CDS 60.0%
AACCGTGCTTCGTTGCAGCG+CGG + tig0019570:110376-110395 Msa1374770:CDS 60.0%
TACCGCGCTGCAACGAAGCA+CGG - tig0019570:110381-110400 None:intergenic 60.0%
!! ATCGGGCGGTGTGCTGATTC+CGG + tig0019570:110589-110608 Msa1374770:CDS 60.0%
CGAAAGCCTGAAAGCGAGCC+TGG - tig0019570:111621-111640 None:intergenic 60.0%
CAACGGAAGGACCGGTGAGA+TGG + tig0019570:111846-111865 Msa1374770:CDS 60.0%
CAGCGATCGGACCATCTCAC+CGG - tig0019570:111860-111879 None:intergenic 60.0%
CGGACATGTGGTGCAGTCTC+TGG - tig0019570:111906-111925 None:intergenic 60.0%
TCCTGTCAGCGACAGGCTGT+CGG - tig0019570:111975-111994 None:intergenic 60.0%
TCTGGTGGCCGGAAGATTCG+AGG + tig0019570:112159-112178 Msa1374770:CDS 60.0%
!! TCGGGCGGTGTGCTGATTCC+GGG + tig0019570:110590-110609 Msa1374770:CDS 65.0%
!! GCGGTGTGCTGATTCCGGGA+CGG + tig0019570:110594-110613 Msa1374770:CDS 65.0%
GTCGGGTCAGCGGGTGAACT+GGG - tig0019570:111957-111976 None:intergenic 65.0%
TGTCGGGTCAGCGGGTGAAC+TGG - tig0019570:111958-111977 None:intergenic 65.0%
CCTGTCAGCGACAGGCTGTC+GGG - tig0019570:111974-111993 None:intergenic 65.0%
TGCGACCGGTATCTGGTGGC+CGG + tig0019570:112148-112167 Msa1374770:CDS 65.0%
TGGTGAGCTGCTGGAGCGCG+AGG + tig0019570:107691-107710 Msa1374770:CDS 70.0%
GGTCAGCGGGTGAACTGGGC+CGG - tig0019570:111953-111972 None:intergenic 70.0%
CGACAGGCTGTCGGGTCAGC+GGG - tig0019570:111966-111985 None:intergenic 70.0%
GCGACAGGCTGTCGGGTCAG+CGG - tig0019570:111967-111986 None:intergenic 70.0%
CCCGACAGCCTGTCGCTGAC+AGG + tig0019570:111971-111990 Msa1374770:CDS 70.0%
Chromosome Type Strat End Strand Name
tig0019570 gene 105436 112591 105436 ID=Msa1374770;Name=Msa1374770
tig0019570 mRNA 105436 112591 105436 ID=Msa1374770-mRNA-1;Parent=Msa1374770;Name=Msa1374770-mRNA-1;_AED=0.04;_eAED=0.04;_QI=156|0.77|0.9|0.9|0.77|0.7|10|280|1239
tig0019570 exon 105436 105485 105436 ID=Msa1374770-mRNA-1:exon:4065;Parent=Msa1374770-mRNA-1
tig0019570 exon 105509 105527 105509 ID=Msa1374770-mRNA-1:exon:4066;Parent=Msa1374770-mRNA-1
tig0019570 exon 105579 106127 105579 ID=Msa1374770-mRNA-1:exon:4067;Parent=Msa1374770-mRNA-1
tig0019570 exon 106347 106559 106347 ID=Msa1374770-mRNA-1:exon:4068;Parent=Msa1374770-mRNA-1
tig0019570 exon 106782 106934 106782 ID=Msa1374770-mRNA-1:exon:4069;Parent=Msa1374770-mRNA-1
tig0019570 exon 107128 108008 107128 ID=Msa1374770-mRNA-1:exon:4070;Parent=Msa1374770-mRNA-1
tig0019570 exon 108664 108955 108664 ID=Msa1374770-mRNA-1:exon:4071;Parent=Msa1374770-mRNA-1
tig0019570 exon 109776 110720 109776 ID=Msa1374770-mRNA-1:exon:4072;Parent=Msa1374770-mRNA-1
tig0019570 exon 110976 111247 110976 ID=Msa1374770-mRNA-1:exon:4073;Parent=Msa1374770-mRNA-1
tig0019570 exon 111810 112591 111810 ID=Msa1374770-mRNA-1:exon:4074;Parent=Msa1374770-mRNA-1
tig0019570 five_prime_UTR 105436 105485 105436 ID=Msa1374770-mRNA-1:five_prime_utr;Parent=Msa1374770-mRNA-1
tig0019570 five_prime_UTR 105509 105527 105509 ID=Msa1374770-mRNA-1:five_prime_utr;Parent=Msa1374770-mRNA-1
tig0019570 five_prime_UTR 105579 105665 105579 ID=Msa1374770-mRNA-1:five_prime_utr;Parent=Msa1374770-mRNA-1
tig0019570 CDS 105666 106127 105666 ID=Msa1374770-mRNA-1:cds;Parent=Msa1374770-mRNA-1
tig0019570 CDS 106347 106559 106347 ID=Msa1374770-mRNA-1:cds;Parent=Msa1374770-mRNA-1
tig0019570 CDS 106782 106934 106782 ID=Msa1374770-mRNA-1:cds;Parent=Msa1374770-mRNA-1
tig0019570 CDS 107128 108008 107128 ID=Msa1374770-mRNA-1:cds;Parent=Msa1374770-mRNA-1
tig0019570 CDS 108664 108955 108664 ID=Msa1374770-mRNA-1:cds;Parent=Msa1374770-mRNA-1
tig0019570 CDS 109776 110720 109776 ID=Msa1374770-mRNA-1:cds;Parent=Msa1374770-mRNA-1
tig0019570 CDS 110976 111247 110976 ID=Msa1374770-mRNA-1:cds;Parent=Msa1374770-mRNA-1
tig0019570 CDS 111810 112311 111810 ID=Msa1374770-mRNA-1:cds;Parent=Msa1374770-mRNA-1
tig0019570 three_prime_UTR 112312 112591 112312 ID=Msa1374770-mRNA-1:three_prime_utr;Parent=Msa1374770-mRNA-1
Gene Sequence

>Msa1374770

ATGGAACACATAGGTTCAAGCAAAGATGCTAACAACACCAACTACACAGAAATGGACATTGACCTCGACGACGATGAAGATCAATCCAACGCCGAAATCCTCAACGAACTCGGTGATGATATGGTCAAATACTTTTGCAAGAAAGCTTCCGTCATGTTCTTCGACCAATACGGTTTAATCAGTCACCAAATCAACTCGTACAATCAATTCATCAATTCTGGTCTTCAAGCCGCTTTCGATTCCTTCGGTGATCTCACTGTTACGCCTGGTTTTGATCCTTCTAAGAAAGGTGCTGATGAACATTACCGTTATGCTACGGTTAAGTTTGGGAAGGTTACGCTTGAGCGACCTAAGTTTTGGTGTGGTGAAGGGAATGCTCAAGAGTTGAAGATGCTTCCCAGACATGCCAGGTTGCAGAGGATGACTTATGCTTCTAAGATGAAAGTTGATGTTCACATCCAGGTATATGTTATGAAGAAGGTTCGAAGTGATAAGTTTAAGACTGGGAAAGAAGAATACATTGATAAAGATATTAAAGGGGAGGATACGAGGGAAATAACTATTGGGAGACTGCCTGTTATGGTCAAGTCTGATCTGTGTTGGATGAGTGAAACTGAGAAAGGTGATTGTGAATTTGACCACGGAGGCTACTTTCTGATTAAGGGTGCTGAAAAGTTATGGCGCCTATTGGTGGCAGATTTTGACCACGCCGATGTGGTAAATGGTGGTCAATATTGCAGGTTTTTCTGCCATAAATGTACCACAAAGTGGTCAAAATTGCAGAAATTTGGGTCTCGGCCACAATATGCCATAGACAATACTGCTTTTATTTTTATCGCACAAGAGCAAATATTTCTGAAGAGACTCTGGGTTTCAAATATTCCATACTGGGCTGTTGCTTTCAAGTCGCAGATGAAGAGAAATAGGATGGTTGTTAAATTGGTGGAAGGTTCGACGGAGGGAATTACACATGGAGAGAAGCTGCTCACAGTGTATTTTCTGTCTGTCGAGATACCTGTATGGATATTGTTTTTTGCTCTTGGTGTCACATCAGATAAAGAAATTGTTGATCTCATCGATTATGGAGAGGCAGATGGAAGAATTGAAAACATTCTCTTTGCATCCATCCGTGAGGCAGACGATAAATGTGAAGCATTTCGTAGGGGAAAGAACGCTCTTCTTTTCTTAGAGGAACGTGTAAAAGGCGTACAGTTTCCACCCGCAGAATCTATTGACGAGTGCTTTAACATGTATGTTTTTCCGAACATTAAAGGATTAAAAAGAAAGGCAAGGTATCTAGCTTACATGGTGAAGGTTCTTCTACTAGCATATACTGGCCGTCGAAAAACTGATAACAGGGACGATTTTCGAAACAAGAGGCTTGAGTTAGCTGGTGAGCTGCTGGAGCGCGAGGTTAAAGTGCACTTTGCACATGCTAGGAAGCGAATGGGGAAGGCCCTGCAGAGAGACCTTTATGGAGAACGAGAAGTTCGTCAAATTGAGCACTATCTTGACGCTTCCATTATTACAAATGGTCTCCAAAGAGCGTTTTCTACTGGAGCTTGGACACATCCTTTCAAAAGGATGGAAAGGATTTCTGGTGTGGTTGCAACTCTTGGGCGAACCAATCCATTACAAACCATGGCTGAATTAAGAAGAACAAGGCAACAAGTTCAGTACACAGGAAAGGTCGGGGATGCTAGATACCCGCATCCTTCTCACTGGGGTAAGGTTTGTTTTCTTTCCACCCCAGATGGTGAAAATTGTGGACTTGTAAAAAATTTGGCTGCCACAGGAGTAGTAAGTACCGATGTAACTGAATCCATACTTCCTCAGCTGTTTGATTGTGGGATGGAAGAACTTGTTGATGATACTACAACTGTTCTGGGGAAAAAAGACAAAGTTTTCCTAAATGGGGACTGGGTTGGAGTTTGTTCAGATTCCATATCATTTGTGGCAGAGCTACGAACTAGAAGACGGAGGAATGAGTTGCCTCATCAGGTGGAAATCAAAAGAGATCAGTGTCAACAAGAAGTGCGCATATTATCTGATGCAGGAAGGATTCTCCGTCCACTCTTGGTTGTTAGTAATCTGCTCAAGATTAAAGGATCTAAGTCTGAGCATAAATCTTTCCAGTCCCTATTGGATAATGGCGTGATTGAGCTGATTGGTCCTGAAGAAGAAGAGGACTTCAAGACTGCTTGGGGTGTTCAGTATTTGTTTGGCAAAGAGGGAAAATCTTCTGTGAAGTACACACATTGTGAACTTGATATGTCATTCTTATTAGGTCTAAGCTGCTCACTTGTTCCATTTGCAAATCATGACCATGCTAGGAGAGTGTTGTACCAATCCCAGAAGCATTCTTCTCAGGCTATTGGCTTTGCTACGACAAACCCAAATATAAGAGTTGATGCTTTGTCTCACCAACTGTTTTATCCACAAAGACCACTCTTTCAGACAATGACATCTGATTGTCTTGGAAAACCTGGATATCTTGGTCAGAGTAAAGTTGTTCCAAAGTCTGAATTCTATAATGGGCAGAATGCAATTGTGGCTGTCAATGTGCATCTCGGATATAATCAAGAAGATTCCTTGGTTATGAACCGTGCTTCGTTGCAGCGCGGTATGTTCAGATCTGAGCATATAAGGAGTTACAAAGCTGAAATTGAGAATAAGGAATCTTCAGAAAAGAGAAAGAAACCTGAAGACATTGTTAATTTTGGAAAGATACAGAGTAAAATTGGCCGAGTTGATAGCCTTGATGATGATGGCTTTCCATTTGTTGGAGCAAATTTGCAAAGTGGTGATATTATCATCGGGCGGTGTGCTGATTCCGGGACGGACCATAGTATAAAGCTAAAGCACACCGAAAGGGGTTATGTTCAAAAGGTTGTGCTGTCTTCGAATGATGAGGGGAAGAATTTTGCTGTTGTTTCGCTGAGACAGGTTAGGAGCCCAGTTCTTGGAGATAAGTTCTCCAGTATGCATGGACAGAAGGGTGTTTTGGGATTTCTGGAGTCTCAGGAAAATTTCCCCTTCACAAAACAAGGCATTGTTCCTGATATTGTTATAAATCCACATGCATTTCCTTCGCGACAAACTCCTGGACAACTACTAGAGGCTGCTTTGGGAAAGGGCATCGCTTGTGTTGGTTCACTGAGGAATGCTACTCCTTTCTCCACTTCCTCTGTTGAAGCCATTACTGACCAGCTTCATAGAGCTGGCTTTTCAAGATGGGGGAACGAACGAGTATACAACGGAAGGACCGGTGAGATGGTCCGATCGCTGATATTTATGGGCCCAACATTCTACCAGAGACTGCACCACATGTCCGAAGACAAAGTCAAATTCAGGAACACCGGCCCAGTTCACCCGCTGACCCGACAGCCTGTCGCTGACAGGAAGCGATTTGGAGGTATCAAGTTTGGTGAGATGGAGCGTGATTGCCTGATAGCTCATGGTGCTTCAGCAAATTTGTATGAACGCCTCTTCACCCTGAGTGATTCGTCTCAGATACACATTTGTAGTAAATGCAAGAATGTTGCAAATGTGATCTTGCGACCGGTATCTGGTGGCCGGAAGATTCGAGGTCCCTACTGCCGTTTCTGTGAATCAGCCGATGACATTGTGGTGGCCAGTGTTCCATATGGAGCAAAGTTATTGTCTCAGGAGCTGTTCAGCATGGGCATTAATCTCAAATTTGAAACTGAGCTTTGCTAG
Protein sequence

>Msa1374770

MEHIGSSKDANNTNYTEMDIDLDDDEDQSNAEILNELGDDMVKYFCKKASVMFFDQYGLISHQINSYNQFINSGLQAAFDSFGDLTVTPGFDPSKKGADEHYRYATVKFGKVTLERPKFWCGEGNAQELKMLPRHARLQRMTYASKMKVDVHIQVYVMKKVRSDKFKTGKEEYIDKDIKGEDTREITIGRLPVMVKSDLCWMSETEKGDCEFDHGGYFLIKGAEKLWRLLVADFDHADVVNGGQYCRFFCHKCTTKWSKLQKFGSRPQYAIDNTAFIFIAQEQIFLKRLWVSNIPYWAVAFKSQMKRNRMVVKLVEGSTEGITHGEKLLTVYFLSVEIPVWILFFALGVTSDKEIVDLIDYGEADGRIENILFASIREADDKCEAFRRGKNALLFLEERVKGVQFPPAESIDECFNMYVFPNIKGLKRKARYLAYMVKVLLLAYTGRRKTDNRDDFRNKRLELAGELLEREVKVHFAHARKRMGKALQRDLYGEREVRQIEHYLDASIITNGLQRAFSTGAWTHPFKRMERISGVVATLGRTNPLQTMAELRRTRQQVQYTGKVGDARYPHPSHWGKVCFLSTPDGENCGLVKNLAATGVVSTDVTESILPQLFDCGMEELVDDTTTVLGKKDKVFLNGDWVGVCSDSISFVAELRTRRRRNELPHQVEIKRDQCQQEVRILSDAGRILRPLLVVSNLLKIKGSKSEHKSFQSLLDNGVIELIGPEEEEDFKTAWGVQYLFGKEGKSSVKYTHCELDMSFLLGLSCSLVPFANHDHARRVLYQSQKHSSQAIGFATTNPNIRVDALSHQLFYPQRPLFQTMTSDCLGKPGYLGQSKVVPKSEFYNGQNAIVAVNVHLGYNQEDSLVMNRASLQRGMFRSEHIRSYKAEIENKESSEKRKKPEDIVNFGKIQSKIGRVDSLDDDGFPFVGANLQSGDIIIGRCADSGTDHSIKLKHTERGYVQKVVLSSNDEGKNFAVVSLRQVRSPVLGDKFSSMHGQKGVLGFLESQENFPFTKQGIVPDIVINPHAFPSRQTPGQLLEAALGKGIACVGSLRNATPFSTSSVEAITDQLHRAGFSRWGNERVYNGRTGEMVRSLIFMGPTFYQRLHHMSEDKVKFRNTGPVHPLTRQPVADRKRFGGIKFGEMERDCLIAHGASANLYERLFTLSDSSQIHICSKCKNVANVILRPVSGGRKIRGPYCRFCESADDIVVASVPYGAKLLSQELFSMGINLKFETELC*