AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa0186000

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0186000 MtrunA17_Chr1g0192801 98.495 997 15 0 1 997 1 997 0.0 2043
Msa0186000 MtrunA17_Chr2g0329341 34.463 1033 557 24 1 997 1 949 0.0 558
Msa0186000 MtrunA17_Chr4g0033461 33.815 1038 580 23 1 997 1 972 3.64e-180 549
Msa0186000 MtrunA17_Chr7g0257661 34.456 1039 584 26 2 997 6 990 6.46e-179 546
Msa0186000 MtrunA17_Chr4g0019461 33.395 1081 583 27 1 997 1 1028 6.34e-178 545
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0186000 AT5G26850.4 53.280 1006 434 13 1 996 1 980 0.0 1060
Msa0186000 AT5G26850.3 53.280 1006 434 13 1 996 1 980 0.0 1060
Msa0186000 AT5G26850.1 53.280 1006 434 13 1 996 1 980 0.0 1060
Msa0186000 AT5G26850.2 53.280 1006 434 13 1 996 1 980 0.0 1060
Msa0186000 AT2G41830.1 33.302 1051 615 29 2 997 6 1025 5.42e-168 519
Msa0186000 AT5G21080.1 33.586 1057 600 29 1 994 1 1018 4.64e-166 514
Msa0186000 AT1G05960.1 32.882 1034 605 22 1 997 1 982 3.46e-163 505
Msa0186000 AT1G05960.3 32.882 1034 605 22 1 997 1 982 3.46e-163 505
Msa0186000 AT1G05960.4 32.882 1034 605 22 1 997 1 982 3.46e-163 505
Msa0186000 AT1G05960.2 32.322 1055 604 23 1 997 1 1003 6.64e-159 495
Msa0186000 AT2G41830.2 30.402 921 555 29 132 997 1 890 7.12e-113 370

Find 250 sgRNAs with CRISPR-Local

Find 501 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
AACACACGAACCGGGGATTT+TGG 0.095953 2_1:-622354 None:intergenic
GCCAGCTTCTTTCTGCCTTT+TGG 0.155395 2_1:+626250 Msa0186000:CDS
CACTCATAACATTGAGAAAT+TGG 0.177257 2_1:+623720 Msa0186000:CDS
TATGGAATCTTGATCTGTTT+TGG 0.198114 2_1:+629120 Msa0186000:three_prime_UTR
GACCTATAAATGATAATTAA+AGG 0.216851 2_1:-629005 None:intergenic
CATATTTGAGCCCATATTTC+CGG 0.235205 2_1:-624548 None:intergenic
GGACAGAGGCTCATCATAAT+TGG 0.246862 2_1:+624267 Msa0186000:CDS
ATCACCTGATAAGTCGTTTC+TGG 0.260485 2_1:+628365 Msa0186000:CDS
TATCAGCATTGGACAACTTA+TGG 0.261951 2_1:+627906 Msa0186000:CDS
GTTGGGAATTGTGTAGAAAA+TGG 0.270724 2_1:+622212 Msa0186000:intron
CAGTTTGTGGTATGCCTATA+TGG 0.270981 2_1:+629102 Msa0186000:three_prime_UTR
TTCCATTGAGAATTGCTTAC+TGG 0.278494 2_1:+625190 Msa0186000:CDS
GTCAATGGGGTTTGGTTACT+TGG 0.285301 2_1:+629185 Msa0186000:three_prime_UTR
TGACTAGCCATAGCGTTATA+TGG 0.286097 2_1:-628270 None:intergenic
AGTTGCATGAGAAGAGATTC+AGG 0.288997 2_1:-625721 None:intergenic
GAGCTGAGTTTGTAAAAGTT+AGG 0.289888 2_1:-626054 None:intergenic
AACCTTTAATTATCATTTAT+AGG 0.291858 2_1:+629003 Msa0186000:three_prime_UTR
AAATTGAAAAGCCGGAAATA+TGG 0.296411 2_1:+624537 Msa0186000:CDS
ATAATGTTGACATGGCTAAT+TGG 0.306488 2_1:-627372 None:intergenic
TTCCAAGGATGAGGCTATTC+AGG 0.309910 2_1:+623470 Msa0186000:CDS
CTCTCTGCGGTCTAGATATA+TGG 0.311683 2_1:+625846 Msa0186000:CDS
ATATGGATCAGCGCAATAAA+AGG 0.322507 2_1:+625863 Msa0186000:CDS
GGTGAAGAAGGTTGTTGTTC+AGG 0.332936 2_1:-621670 None:intergenic
ATATTTGAAGGTAAGTTATC+AGG 0.334594 2_1:-626288 None:intergenic
GCAGCCACTATTTGACTTGA+TGG 0.335786 2_1:+625327 Msa0186000:CDS
AGTTAGTTTGGAAGAAGATC+TGG 0.338768 2_1:-621714 None:intergenic
TAATCAGGTTGATCCGTTCT+TGG 0.342056 2_1:+627276 Msa0186000:intron
CAACACTGGGCTCCTCAAAA+TGG 0.345616 2_1:+624656 Msa0186000:CDS
TGCTTACTGGAAATCGCTAA+TGG 0.347104 2_1:+625203 Msa0186000:CDS
TATCTGAGTACTAACTGTTT+TGG 0.347863 2_1:+629161 Msa0186000:three_prime_UTR
GTGTTTGCTGTCCTGCTTTG+AGG 0.348843 2_1:+622277 Msa0186000:CDS
TCAAATATGCATTCAAAGAT+TGG 0.351182 2_1:+624562 Msa0186000:CDS
CTATCTTTGTATTATCTGTT+GGG 0.351742 2_1:+627097 Msa0186000:CDS
CACGGAAGAAGCTTTCAAAT+TGG 0.352892 2_1:+628316 Msa0186000:CDS
ATGAATCAAAGCATTCATTA+TGG 0.353775 2_1:-627431 None:intergenic
AGGGAAGGATCCTTTACTTC+TGG 0.359637 2_1:-624377 None:intergenic
TCACTTAGCTTCATAACATA+TGG 0.363478 2_1:-626216 None:intergenic
ACATCTCCGGAAAAGTTTCC+AGG 0.366842 2_1:+625112 Msa0186000:CDS
AAAGAAGTACAGAAAATATA+AGG 0.370150 2_1:-625792 None:intergenic
CACAACTATGCGTCGTGTAT+TGG 0.373040 2_1:+624604 Msa0186000:CDS
ATCTCTCTGGACTATGTTGT+TGG 0.375688 2_1:+626919 Msa0186000:CDS
TCTAAGAACTATGTAAATCT+TGG 0.379391 2_1:+629029 Msa0186000:three_prime_UTR
AGCTGAGTTTGTAAAAGTTA+GGG 0.379411 2_1:-626053 None:intergenic
TGTATTATCTGTTGGGATGC+TGG 0.380197 2_1:+627104 Msa0186000:CDS
GAAGCTAAGTGAAGATCAAA+TGG 0.380515 2_1:+626227 Msa0186000:CDS
TTGGGAATTGTGTAGAAAAT+GGG 0.383142 2_1:+622213 Msa0186000:exon
AACTCAGCTCAATCATTGAT+AGG 0.385267 2_1:+626067 Msa0186000:CDS
GCTTACTGGAAATCGCTAAT+GGG 0.386680 2_1:+625204 Msa0186000:CDS
ACGATGTGAGCACATCATTC+AGG 0.386855 2_1:-627158 None:intergenic
ATGGGGTTTGGTTACTTGGT+AGG 0.390123 2_1:+629189 Msa0186000:three_prime_UTR
TCCAGCTTCCTCTATCTCTC+TGG 0.391647 2_1:+626906 Msa0186000:CDS
GGAGGGGAAAGAGGCATCTT+TGG 0.392907 2_1:-627871 None:intergenic
TTTCTTAACCAAACAGTTTG+TGG 0.403843 2_1:+629089 Msa0186000:three_prime_UTR
CAACAAATTCACTGGAGGCC+TGG 0.407252 2_1:-625130 None:intergenic
ATCTTCACCTCCTGAATTTG+AGG 0.409146 2_1:-627803 None:intergenic
TAAATAAATACCTGGTTAAG+AGG 0.409724 2_1:-624397 None:intergenic
TAATGTAACTTCGGAGCTCT+TGG 0.409971 2_1:+623443 Msa0186000:CDS
AGATGAACCTTGTTAGAGAT+TGG 0.410559 2_1:-623503 None:intergenic
AGCTTCTGTGATACATCATC+TGG 0.410689 2_1:+624962 Msa0186000:CDS
CCACTTTAGATAACTATGAT+TGG 0.410939 2_1:+624216 Msa0186000:CDS
CCTTTACTTCTGGTCGTGGT+TGG 0.415418 2_1:-624367 None:intergenic
GTAGTCCTACCAAGTTAGTT+TGG 0.416879 2_1:-621726 None:intergenic
TCTATCTTTGTATTATCTGT+TGG 0.417855 2_1:+627096 Msa0186000:CDS
CAGGCCTCCAGTGAATTTGT+TGG 0.419624 2_1:+625131 Msa0186000:CDS
CCTGATGAAGACTTTGTGTT+TGG 0.420588 2_1:+627617 Msa0186000:CDS
AATCAGGTTGATCCGTTCTT+GGG 0.423126 2_1:+627277 Msa0186000:intron
CTGGGCTCCTCAAAATGGTT+TGG 0.428933 2_1:+624661 Msa0186000:CDS
GCCTTGAGAAAATTATCAAA+TGG 0.432068 2_1:-628866 None:intergenic
ATATAGGTCGTACCATTACT+TGG 0.432983 2_1:-626944 None:intergenic
TAGGCATACCACAAACTGTT+TGG 0.433319 2_1:-629097 None:intergenic
AAGGCCAGAAACGACTTATC+AGG 0.434309 2_1:-628369 None:intergenic
GAGAGGAAACTTCATGTGTA+TGG 0.434340 2_1:-625828 None:intergenic
GGTAGACGGTTAGCAGAGAT+TGG 0.436369 2_1:+625068 Msa0186000:CDS
AGCCGGGCTGGTTCAGTTGT+TGG 0.439952 2_1:+624314 Msa0186000:CDS
AGGTAAGTTATCAGGAAGAT+TGG 0.440492 2_1:-626280 None:intergenic
CTTGGCAATGCTGCTACTTG+TGG 0.441940 2_1:-628815 None:intergenic
AGCAATTCTCAATGGAACTT+TGG 0.442262 2_1:-625184 None:intergenic
AACATAGTCCAGAGAGATAG+AGG 0.443642 2_1:-626914 None:intergenic
GCTATAGCTTCAATATTTGA+AGG 0.445577 2_1:-626300 None:intergenic
GGTACCAATGCTGCAGATCA+TGG 0.447898 2_1:+625955 Msa0186000:CDS
TTACATCTGCGTCTTACAAA+TGG 0.448384 2_1:-623238 None:intergenic
TGGGGTTTGGTTACTTGGTA+GGG 0.449119 2_1:+629190 Msa0186000:three_prime_UTR
ACGCATAGTTGTGCTTTCCT+TGG 0.450738 2_1:-624594 None:intergenic
ACCCTAGAAAATATTCCATC+TGG 0.453377 2_1:+625355 Msa0186000:CDS
TCAATCATTGATAGGGCTAC+AGG 0.458148 2_1:+626075 Msa0186000:CDS
AATTGAAAAGCCGGAAATAT+GGG 0.458899 2_1:+624538 Msa0186000:CDS
ACACACATGCTCTCACAAGC+TGG 0.465349 2_1:-622258 None:intergenic
CTAGCAGGAGGCAACTTCAT+GGG 0.466240 2_1:-628842 None:intergenic
CAGCCTCATGTTATCAGCAT+TGG 0.470689 2_1:+627895 Msa0186000:CDS
GGCAACTTCATGGGGTCCCT+TGG 0.470965 2_1:-628833 None:intergenic
GCTAGCAGGAGGCAACTTCA+TGG 0.471040 2_1:-628843 None:intergenic
GGGATACAGTCGCAGAAGAA+TGG 0.471163 2_1:+626004 Msa0186000:CDS
TTATTCTCAAGAGTCGTTGT+CGG 0.472995 2_1:+627676 Msa0186000:CDS
TTCCAGTAAGCAATTCTCAA+TGG 0.475291 2_1:-625192 None:intergenic
AATATTCCATCTGGTGTTGT+TGG 0.475831 2_1:+625364 Msa0186000:CDS
CCATGAAAACTGCTGTTTGA+GGG 0.478275 2_1:+623783 Msa0186000:CDS
GTGACCTTTGCAGACATCTC+CGG 0.479951 2_1:+625099 Msa0186000:CDS
GAAGAAGCTTTCAAATTGGT+TGG 0.480041 2_1:+628320 Msa0186000:CDS
GACTAGCCATAGCGTTATAT+GGG 0.480113 2_1:-628269 None:intergenic
AATACCTTTGGAATCCGAAA+AGG 0.481562 2_1:-622992 None:intergenic
TTGTTCATGATGACAAAGAA+AGG 0.485769 2_1:+625983 Msa0186000:CDS
AAATTATCAAATGGGCTAGC+AGG 0.485948 2_1:-628857 None:intergenic
CACCTGCTGCACACGTAAGT+TGG 0.485976 2_1:-625443 None:intergenic
CAGTAACGCAGCACTTGAAA+AGG 0.486168 2_1:+628401 Msa0186000:CDS
TTAGCCATGCAGATTAGATC+AGG 0.487063 2_1:+625047 Msa0186000:CDS
GACAGAGGCTCATCATAATT+GGG 0.487979 2_1:+624268 Msa0186000:CDS
CCAATCATAGTTATCTAAAG+TGG 0.491188 2_1:-624216 None:intergenic
CTAGTCAGTGTGAATCGCTT+GGG 0.491508 2_1:+628286 Msa0186000:CDS
TGTTTGTCTACTTTGATACA+AGG 0.491516 2_1:+624633 Msa0186000:CDS
TTGTTCTCCAACAAATTCAC+TGG 0.494096 2_1:-625138 None:intergenic
TCTTCACCTCCTGAATTTGA+GGG 0.495264 2_1:-627802 None:intergenic
TCCAAAAGGCAGAAAGAAGC+TGG 0.495456 2_1:-626251 None:intergenic
ACTTTGATACAAGGCAACAC+TGG 0.496348 2_1:+624642 Msa0186000:CDS
AGTGGTATGGTAGGTGAAGA+AGG 0.497023 2_1:-621682 None:intergenic
AAAGTGACGATGCTGACATC+AGG 0.497408 2_1:+624246 Msa0186000:CDS
CTTGATCTTGACCTCAAAGC+AGG 0.497671 2_1:-622288 None:intergenic
GGCCAACTTACGTGTGCAGC+AGG 0.497828 2_1:+625441 Msa0186000:CDS
TGCCTGAATAGCCTCATCCT+TGG 0.498100 2_1:-623472 None:intergenic
CCAAACACAAAGTCTTCATC+AGG 0.499803 2_1:-627617 None:intergenic
CCTTGAGAAAATTATCAAAT+GGG 0.500207 2_1:-628865 None:intergenic
GTCCGTAGTGAAAGCCGGGC+TGG 0.501507 2_1:+624302 Msa0186000:CDS
TAGAGAAGAAATTGAAAAGC+CGG 0.502337 2_1:+624529 Msa0186000:intron
AATGTGGATTTGAGAGAGTA+TGG 0.504392 2_1:+627334 Msa0186000:CDS
CATTGGACAACTTATGGAAT+CGG 0.507209 2_1:+627912 Msa0186000:CDS
AATGAATTTCTAGGAATGGT+AGG 0.508401 2_1:+628973 Msa0186000:three_prime_UTR
AACAAGGTTCATCTACTGTC+AGG 0.509746 2_1:+623512 Msa0186000:CDS
AGAAGGTTGTTGTTCAGGAA+TGG 0.511294 2_1:-621665 None:intergenic
ATTCCCATGATCTGCAGCAT+TGG 0.511420 2_1:-625959 None:intergenic
AGGTTGTCCGTAGTGAAAGC+CGG 0.512182 2_1:+624297 Msa0186000:CDS
AGATAGACCTTTGATACGCA+GGG 0.512398 2_1:-627080 None:intergenic
GGATCCTTTACTTCTGGTCG+TGG 0.513079 2_1:-624371 None:intergenic
GATCTTCTTCCAAACTAACT+TGG 0.515141 2_1:+621717 Msa0186000:five_prime_UTR
CTTGCAATGCCTTTCAGCAA+TGG 0.516015 2_1:+623813 Msa0186000:CDS
CCCATGAAAACTGCTGTTTG+AGG 0.516446 2_1:+623782 Msa0186000:CDS
TCGAGCACTCACTTCTGCAT+TGG 0.516674 2_1:+625420 Msa0186000:CDS
AAGATTGGCTTGAATCCAAA+AGG 0.517677 2_1:-626265 None:intergenic
TCTCCGACAGTAGCACAGTC+AGG 0.520659 2_1:-627586 None:intergenic
TCAAAATGGTTTGGCAATGG+TGG 0.522026 2_1:+624670 Msa0186000:CDS
TGAGGCTGCGGAGGGGAAAG+AGG 0.522774 2_1:-627880 None:intergenic
TCCAGAGAGATAGAGGAAGC+TGG 0.524560 2_1:-626907 None:intergenic
GCTAGTCAGTGTGAATCGCT+TGG 0.525853 2_1:+628285 Msa0186000:CDS
AACAGATCAAGATTCCATAT+AGG 0.527830 2_1:-629116 None:intergenic
TATCAGGTGATTGAGTGTAA+TGG 0.527881 2_1:-628353 None:intergenic
ACAGACGTAGAGGCTCGTAT+TGG 0.528380 2_1:+625763 Msa0186000:CDS
TCAAAGCATTCATTATGGTC+TGG 0.528453 2_1:-627426 None:intergenic
ACTACATAGGATTTAAGTTG+AGG 0.535110 2_1:-625008 None:intergenic
CCTAAAAGACAAAGATAACC+TGG 0.537904 2_1:+626871 Msa0186000:CDS
ATTCTTGTAGGAAGCATATG+AGG 0.538567 2_1:+628784 Msa0186000:intron
TCATGTGTATGGAAGGAACT+TGG 0.541459 2_1:-625817 None:intergenic
CACAAGTAGCAGCATTGCCA+AGG 0.542802 2_1:+628816 Msa0186000:CDS
AATCGCTTGGGACATGTTCA+CGG 0.544060 2_1:+628298 Msa0186000:CDS
AAGATCTGGGAGTGAGTGAG+TGG 0.545041 2_1:-621700 None:intergenic
TCATCATAATTGGGTGAATG+AGG 0.546464 2_1:+624277 Msa0186000:CDS
GAAAGTATGCATGCTATCAC+AGG 0.546637 2_1:+623747 Msa0186000:CDS
TGCGTTACTGTTACGAGCAA+AGG 0.547088 2_1:-628388 None:intergenic
CTGATAACATGAGGCTGCGG+AGG 0.547188 2_1:-627889 None:intergenic
GCTGGAAGAAGCGGATCACC+AGG 0.548570 2_1:-626889 None:intergenic
CCACTGCTTGTAGGCACTGG+AGG 0.548875 2_1:+628203 Msa0186000:intron
GTACCAATGCTGCAGATCAT+GGG 0.551545 2_1:+625956 Msa0186000:CDS
TCCTCAAAATGGTTTGGCAA+TGG 0.552323 2_1:+624667 Msa0186000:CDS
TGGATGTTAACTAGCTAGCT+AGG 0.552791 2_1:+628892 Msa0186000:exon
GCCTCTCCCATATAACGCTA+TGG 0.557171 2_1:+628263 Msa0186000:CDS
GGTTGTCCGTAGTGAAAGCC+GGG 0.558066 2_1:+624298 Msa0186000:CDS
AGGATGAGCTTCCAAATGAA+AGG 0.558576 2_1:+622933 Msa0186000:intron
CCAACCACGACCAGAAGTAA+AGG 0.559542 2_1:+624367 Msa0186000:CDS
GTTAGTTTGGAAGAAGATCT+GGG 0.559762 2_1:-621713 None:intergenic
AAGATTGGTTGAATTAGCCA+AGG 0.561860 2_1:+624577 Msa0186000:CDS
CTTTGATACAAGGCAACACT+GGG 0.562685 2_1:+624643 Msa0186000:CDS
ATTGCCATCAAGTCAAATAG+TGG 0.564299 2_1:-625331 None:intergenic
ATAGAGGAAGCTGGAAGAAG+CGG 0.564685 2_1:-626898 None:intergenic
TACCAACAACTGAACCAGCC+CGG 0.566000 2_1:-624316 None:intergenic
GGAAACTTCATGTGTATGGA+AGG 0.566576 2_1:-625824 None:intergenic
CACACATGCTCTCACAAGCT+GGG 0.566639 2_1:-622257 None:intergenic
GGAGCTCTTGGACTATTCCA+AGG 0.568212 2_1:+623455 Msa0186000:CDS
GCCATAGCGTTATATGGGAG+AGG 0.568777 2_1:-628264 None:intergenic
AACCAGCCCGGCTTTCACTA+CGG 0.569428 2_1:-624304 None:intergenic
TGTTCATGATGACAAAGAAA+GGG 0.570353 2_1:+625984 Msa0186000:CDS
ACTCAGCTCAATCATTGATA+GGG 0.570479 2_1:+626068 Msa0186000:CDS
AAGCTCCGCAGAGGCAGAGA+TGG 0.571699 2_1:+625934 Msa0186000:CDS
AAATACCTGGTTAAGAGGGA+AGG 0.574826 2_1:-624392 None:intergenic
AAGATAGACCTTTGATACGC+AGG 0.576509 2_1:-627081 None:intergenic
CAACTCAGATAATGTTGACA+TGG 0.576748 2_1:-627380 None:intergenic
CTTGGACTATTCCAAGGATG+AGG 0.577851 2_1:+623461 Msa0186000:CDS
AGGATCCTTCCCTCTTAACC+AGG 0.580463 2_1:+624387 Msa0186000:CDS
AAATAAATACCTGGTTAAGA+GGG 0.580806 2_1:-624396 None:intergenic
TGCATGCTATCACAGGAGCC+TGG 0.581266 2_1:+623754 Msa0186000:CDS
AGAGTCGTTGTCGGTTGATG+AGG 0.581281 2_1:+627685 Msa0186000:CDS
TAAATATGAATACTAGTCAA+AGG 0.582260 2_1:-621600 None:intergenic
GAGGTAGCAAGTCATGTGGC+AGG 0.584697 2_1:+628222 Msa0186000:CDS
GATGAGGCTATTCAGGCACT+TGG 0.586353 2_1:+623477 Msa0186000:CDS
GTATCAAAGTAGACAAACAT+TGG 0.587883 2_1:-624629 None:intergenic
AAGCTAAGTGAAGATCAAAT+GGG 0.589572 2_1:+626228 Msa0186000:CDS
CAGAAGTGAGTGCTCGAGCA+AGG 0.590084 2_1:-625414 None:intergenic
TGAAAGGCATTGCAAGCTTG+AGG 0.590364 2_1:-623806 None:intergenic
TTCTCCAACAAATTCACTGG+AGG 0.591292 2_1:-625135 None:intergenic
TGATAACATGAGGCTGCGGA+GGG 0.592325 2_1:-627888 None:intergenic
ACCCGTGTTCTCAATGAAGT+AGG 0.592530 2_1:-624708 None:intergenic
TAATTATTACATTTCACACC+GGG 0.592865 2_1:+621636 Msa0186000:five_prime_UTR
TGATGTGCTTAATGTAACTT+CGG 0.595798 2_1:+623434 Msa0186000:CDS
TAGCAGGAGGCAACTTCATG+GGG 0.596336 2_1:-628841 None:intergenic
GCTGAGTTTGTAAAAGTTAG+GGG 0.596740 2_1:-626052 None:intergenic
GTTGTTGGAAGAGCAACCAT+TGG 0.600825 2_1:+625379 Msa0186000:CDS
GGCCTACTTCATTGAGAACA+CGG 0.601237 2_1:+624706 Msa0186000:CDS
AAGGACTATGAGTGATCCAA+TGG 0.601682 2_1:-625395 None:intergenic
CTGGGAGTGAGTGAGTGGTA+TGG 0.602112 2_1:-621695 None:intergenic
TCTTTGGAATGAATCGAGAA+AGG 0.604792 2_1:-627855 None:intergenic
CACTAATTACCATTGCTGAA+AGG 0.608576 2_1:-623822 None:intergenic
TGGGAATTGTGTAGAAAATG+GGG 0.611214 2_1:+622214 Msa0186000:exon
AGTATATGCTAAGATGAATG+TGG 0.613347 2_1:+627318 Msa0186000:CDS
GAAGAATGGAAACAAGGCTG+TGG 0.614177 2_1:+626018 Msa0186000:CDS
TTGTAGGAAGCATATGAGGA+TGG 0.615497 2_1:+628788 Msa0186000:intron
TGTCAACATTATCTGAGTTG+AGG 0.616482 2_1:+627383 Msa0186000:CDS
TATAGGTCGTACCATTACTT+GGG 0.620563 2_1:-626943 None:intergenic
TGTGGCAACTTGAACTACAT+AGG 0.621551 2_1:-625021 None:intergenic
CTAATTATTACATTTCACAC+CGG 0.622015 2_1:+621635 Msa0186000:five_prime_UTR
CTTACTGGAAATCGCTAATG+GGG 0.622795 2_1:+625205 Msa0186000:CDS
ATGTTGTTGGACCCAAGTAA+TGG 0.623118 2_1:+626932 Msa0186000:CDS
GCTCTTCCAACAACACCAGA+TGG 0.623254 2_1:-625370 None:intergenic
TTGGTTGCCAATCTCTAACA+AGG 0.624650 2_1:+623496 Msa0186000:CDS
GAGTGAGTGAGTGGTATGGT+AGG 0.629943 2_1:-621691 None:intergenic
TAACTTGACAAACTTTACTG+AGG 0.631465 2_1:+627453 Msa0186000:CDS
TTATCAAATGGGCTAGCAGG+AGG 0.632238 2_1:-628854 None:intergenic
TAACCTGACTGTGCTACTGT+CGG 0.639106 2_1:+627583 Msa0186000:CDS
ATGCTGATAACATGAGGCTG+CGG 0.639691 2_1:-627892 None:intergenic
ATCTCAAAGTTTGACTGATG+TGG 0.641021 2_1:+626098 Msa0186000:CDS
TGCAGATTAGATCAGGTAGA+CGG 0.649513 2_1:+625054 Msa0186000:CDS
GTTCAGGAATGGAGAGACCC+CGG 0.650170 2_1:-621654 None:intergenic
TCTACCTGATCTAATCTGCA+TGG 0.651480 2_1:-625051 None:intergenic
AATCTGCATGGCTAAAGATG+TGG 0.656601 2_1:-625039 None:intergenic
GTCGCAGAAGAATGGAAACA+AGG 0.656645 2_1:+626012 Msa0186000:CDS
ACAAGTAGCAGCATTGCCAA+GGG 0.658384 2_1:+628817 Msa0186000:CDS
AATGATGCATACAGACGTAG+AGG 0.658447 2_1:+625753 Msa0186000:CDS
GCCTACTTCATTGAGAACAC+GGG 0.662101 2_1:+624707 Msa0186000:CDS
CACATCGTTAGCAAAATCTG+AGG 0.662195 2_1:+627173 Msa0186000:CDS
TTACTTGAAAAGCTCCGCAG+AGG 0.662208 2_1:+625925 Msa0186000:CDS
GTTATATGGGAGAGGCGAAG+TGG 0.663525 2_1:-628256 None:intergenic
GGGAATTGTGTAGAAAATGG+GGG 0.674893 2_1:+622215 Msa0186000:exon
GATAACATGAGGCTGCGGAG+GGG 0.679500 2_1:-627887 None:intergenic
CACATGAAGTTTCCTCTCTG+CGG 0.680864 2_1:+625833 Msa0186000:CDS
TCATCACTGATACCCAAGAA+CGG 0.684971 2_1:-627289 None:intergenic
TTGAGTGTAATGGTTCTCGA+AGG 0.688196 2_1:-628343 None:intergenic
GATAGACCTTTGATACGCAG+GGG 0.700458 2_1:-627079 None:intergenic
CGATGCTGACATCAGGACAG+AGG 0.701480 2_1:+624253 Msa0186000:CDS
ACTGGAGGTAGCAAGTCATG+TGG 0.701631 2_1:+628218 Msa0186000:CDS
TGGTACCATCTCTGCCTCTG+CGG 0.705276 2_1:-625939 None:intergenic
TTCTGATCAAGAATTGACTG+TGG 0.705291 2_1:-627641 None:intergenic
ATAGACCTTTGATACGCAGG+GGG 0.716198 2_1:-627078 None:intergenic
CATATATCTAGACCGCAGAG+AGG 0.728704 2_1:-625845 None:intergenic
AATTATTACATTTCACACCG+GGG 0.733876 2_1:+621637 Msa0186000:five_prime_UTR
TGTCCAATGCTGATAACATG+AGG 0.744103 2_1:-627898 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! AAAAAAAGCAATAAAAAAAA+AGG - chr2_1:621949-621968 None:intergenic 10.0%
!!! TTTTTTTTTTTTTTGAGAAT+TGG - chr2_1:622591-622610 None:intergenic 10.0%
!! AATTCTCAAAAAAAAAAAAA+AGG + chr2_1:622590-622609 Msa0186000:intron 10.0%
!! ATTCTCAAAAAAAAAAAAAA+GGG + chr2_1:622591-622610 Msa0186000:intron 10.0%
!!! TGAAAATAATTTGTAATAAT+TGG - chr2_1:622752-622771 None:intergenic 10.0%
!!! ATTATTAATTTTTTTTTTGC+AGG + chr2_1:625635-625654 Msa0186000:intron 10.0%
!! AAAAAAACAGAAAGAAAAAA+AGG - chr2_1:621770-621789 None:intergenic 15.0%
!!! ATTTGTAGTTGAATATATTT+TGG + chr2_1:622142-622161 Msa0186000:intron 15.0%
!! AATTCAAACACATTAAAAAA+GGG - chr2_1:622386-622405 None:intergenic 15.0%
!! AAATTCAAACACATTAAAAA+AGG - chr2_1:622387-622406 None:intergenic 15.0%
!!! TCATTTTACCAAATTATATA+TGG + chr2_1:622837-622856 Msa0186000:intron 15.0%
!! AATAAATGAATAAATACCTT+TGG - chr2_1:623007-623026 None:intergenic 15.0%
!!! TTTAATTTTATTCAAAGAAG+AGG + chr2_1:623049-623068 Msa0186000:intron 15.0%
!! ATAAATAAAGACAATGATAA+GGG - chr2_1:624502-624521 None:intergenic 15.0%
!!! ACTATATTTTGATATTGAAT+TGG + chr2_1:626183-626202 Msa0186000:intron 15.0%
!!! CTATATTTTGATATTGAATT+GGG + chr2_1:626184-626203 Msa0186000:intron 15.0%
!!! TTTGAAGATTCAATTTTATT+AGG - chr2_1:626511-626530 None:intergenic 15.0%
!!! AACTATATAAATTTGTTGAT+CGG + chr2_1:626620-626639 Msa0186000:intron 15.0%
!!! TCTTTTTTGATACAATAAAA+AGG - chr2_1:627019-627038 None:intergenic 15.0%
!! TATGAAGAAAAAAAAAAAAG+TGG - chr2_1:627499-627518 None:intergenic 15.0%
!! TCAATAAAAATTGAATTTGA+AGG - chr2_1:627758-627777 None:intergenic 15.0%
!! TAAAGAAAAAATAGAGTAAA+GGG - chr2_1:628671-628690 None:intergenic 15.0%
!! TTTAGTAAAAATGAATTTCT+AGG + chr2_1:628964-628983 Msa0186000:three_prime_UTR 15.0%
!! AACCTTTAATTATCATTTAT+AGG + chr2_1:629003-629022 Msa0186000:three_prime_UTR 15.0%
!!! GTTATTTTACAAATATTACA+AGG - chr2_1:629063-629082 None:intergenic 15.0%
!!! AGTATTATTTATCACTGTTT+TGG + chr2_1:621807-621826 Msa0186000:intron 20.0%
!! TAGTATAAAAATCTCCAAAA+GGG - chr2_1:621839-621858 None:intergenic 20.0%
!! ATATAAAATGCAACTAAGAT+GGG - chr2_1:622094-622113 None:intergenic 20.0%
!! AATATAAAATGCAACTAAGA+TGG - chr2_1:622095-622114 None:intergenic 20.0%
!!! TCTTAGTTGCATTTTATATT+TGG + chr2_1:622095-622114 Msa0186000:intron 20.0%
!!! TAGTTGAATATATTTTGGTT+GGG + chr2_1:622147-622166 Msa0186000:intron 20.0%
!! ATGTGTTTGAATTTGAAAAT+AGG + chr2_1:622393-622412 Msa0186000:intron 20.0%
!!! CTAACATTTTGTTTTTCTAT+TGG - chr2_1:622510-622529 None:intergenic 20.0%
!! TAGAAAAACAAAATGTTAGT+AGG + chr2_1:622511-622530 Msa0186000:intron 20.0%
!! AAAATAACATCAACATAACA+TGG - chr2_1:623292-623311 None:intergenic 20.0%
!! AGTACAATATAACTTTATGT+TGG - chr2_1:623360-623379 None:intergenic 20.0%
!!! TTTATTTCACTACCTTTTTT+TGG + chr2_1:623939-623958 Msa0186000:intron 20.0%
!!! TAGATTTTTCCAAATTTTCA+TGG + chr2_1:624114-624133 Msa0186000:intron 20.0%
!! GATAAATAAAGACAATGATA+AGG - chr2_1:624503-624522 None:intergenic 20.0%
!! TGAATATTAATTACCATACA+TGG + chr2_1:624851-624870 Msa0186000:intron 20.0%
!!! AATTTTTTTTTTGCAGGTAA+TGG + chr2_1:625641-625660 Msa0186000:intron 20.0%
!!! AAAGAAGTACAGAAAATATA+AGG - chr2_1:625795-625814 None:intergenic 20.0%
!! TTTGATACAATAAAAAGGAA+TGG - chr2_1:627014-627033 None:intergenic 20.0%
!!! TTGATCATTTTTTGTTTTTC+AGG + chr2_1:627774-627793 Msa0186000:intron 20.0%
!! GTAAAGAAAAAATAGAGTAA+AGG - chr2_1:628672-628691 None:intergenic 20.0%
!! TTGATATCATACTACTAAAT+GGG - chr2_1:628697-628716 None:intergenic 20.0%
!! ATTGATATCATACTACTAAA+TGG - chr2_1:628698-628717 None:intergenic 20.0%
!! AGTAGTATGATATCAATTTA+TGG + chr2_1:628701-628720 Msa0186000:intron 20.0%
!! TATAAAATGCCTGAAATAAT+TGG - chr2_1:628752-628771 None:intergenic 20.0%
!!! TAAAAATGAATTTCTAGGAA+TGG + chr2_1:628969-628988 Msa0186000:three_prime_UTR 20.0%
!! GACCTATAAATGATAATTAA+AGG - chr2_1:629008-629027 None:intergenic 20.0%
! CTAATTATTACATTTCACAC+CGG + chr2_1:621635-621654 Msa0186000:five_prime_UTR 25.0%
! TAATTATTACATTTCACACC+GGG + chr2_1:621636-621655 Msa0186000:five_prime_UTR 25.0%
! GTAGTATAAAAATCTCCAAA+AGG - chr2_1:621840-621859 None:intergenic 25.0%
!!! TTGCTTTATTTATTCCTTTC+TGG + chr2_1:621909-621928 Msa0186000:intron 25.0%
! TACTACATAAGTTACAAACA+TGG - chr2_1:621994-622013 None:intergenic 25.0%
! TAACAGTTGAAATGCAAAAT+AGG - chr2_1:622052-622071 None:intergenic 25.0%
!!! GTAGTTGAATATATTTTGGT+TGG + chr2_1:622146-622165 Msa0186000:intron 25.0%
!! GTTTGAAGTTTGAACTAATT+TGG + chr2_1:622169-622188 Msa0186000:intron 25.0%
!! GTTTTTCTATTGGATCATAA+TGG - chr2_1:622500-622519 None:intergenic 25.0%
! AATTTGTAATAATTGGCAAG+AGG - chr2_1:622745-622764 None:intergenic 25.0%
! AGATATGGCCATATATAATT+TGG - chr2_1:622848-622867 None:intergenic 25.0%
! AATGGTAAAGCAAAAAGATA+TGG - chr2_1:622863-622882 None:intergenic 25.0%
! ATTGTATAACATGAATACCA+GGG - chr2_1:622906-622925 None:intergenic 25.0%
! TATTGTATAACATGAATACC+AGG - chr2_1:622907-622926 None:intergenic 25.0%
!! TTGACAATTTTCCTTTCATT+TGG - chr2_1:622947-622966 None:intergenic 25.0%
! TCATTTATTTCAGTCATGTA+TGG + chr2_1:623018-623037 Msa0186000:intron 25.0%
! CATTTATTTCAGTCATGTAT+GGG + chr2_1:623019-623038 Msa0186000:intron 25.0%
!! AATTTTATTCAAAGAAGAGG+AGG + chr2_1:623052-623071 Msa0186000:intron 25.0%
! AGAAATAGTGAACTTAGAAT+TGG - chr2_1:623107-623126 None:intergenic 25.0%
! TATATTGCTCTTTGCTTATT+TGG + chr2_1:623555-623574 Msa0186000:intron 25.0%
! AAGGTAGTGAAATAAACATT+GGG - chr2_1:623935-623954 None:intergenic 25.0%
! AAAGGTAGTGAAATAAACAT+TGG - chr2_1:623936-623955 None:intergenic 25.0%
! AAATAAATACCTGGTTAAGA+GGG - chr2_1:624399-624418 None:intergenic 25.0%
! TAAATAAATACCTGGTTAAG+AGG - chr2_1:624400-624419 None:intergenic 25.0%
! TCAAATATGCATTCAAAGAT+TGG + chr2_1:624562-624581 Msa0186000:CDS 25.0%
! TAAATTCCATACAGTTATGA+AGG - chr2_1:624807-624826 None:intergenic 25.0%
! TTCATAACTGTATGGAATTT+AGG + chr2_1:624806-624825 Msa0186000:intron 25.0%
!! TTTTACAGAAAAACCATGTA+TGG - chr2_1:624867-624886 None:intergenic 25.0%
! CAGAAAAAGGTAAAGATTAA+GGG - chr2_1:624920-624939 None:intergenic 25.0%
!! GATCATTCATAACATTTTTG+TGG - chr2_1:624989-625008 None:intergenic 25.0%
!!! AACTACTGTTTTTTCTTTGT+TGG + chr2_1:625285-625304 Msa0186000:intron 25.0%
!!! ATTTTTAAGAGAATGTGTCT+TGG - chr2_1:625588-625607 None:intergenic 25.0%
! ATATTTGAAGGTAAGTTATC+AGG - chr2_1:626291-626310 None:intergenic 25.0%
! AAAAATAGACTAAGCAGTAA+AGG - chr2_1:626427-626446 None:intergenic 25.0%
! ATTATATTCACATTGACCTA+TGG + chr2_1:626697-626716 Msa0186000:intron 25.0%
! TGTATGATGCTTGTAAATAT+TGG + chr2_1:626737-626756 Msa0186000:intron 25.0%
! ACAATAAAAAGGAATGGTTT+GGG - chr2_1:627008-627027 None:intergenic 25.0%
! TACAATAAAAAGGAATGGTT+TGG - chr2_1:627009-627028 None:intergenic 25.0%
! TCTATCTTTGTATTATCTGT+TGG + chr2_1:627096-627115 Msa0186000:CDS 25.0%
! CTATCTTTGTATTATCTGTT+GGG + chr2_1:627097-627116 Msa0186000:CDS 25.0%
!! ATGAATCTGATATATTTTGC+AGG - chr2_1:627136-627155 None:intergenic 25.0%
!! ATGAATCAAAGCATTCATTA+TGG - chr2_1:627434-627453 None:intergenic 25.0%
!!! ACGATGTTTATGTTATTTTG+AGG + chr2_1:627726-627745 Msa0186000:intron 25.0%
! AGATAATACGATTCAAAGAT+TGG - chr2_1:628050-628069 None:intergenic 25.0%
!! TTTTGCGTAAATAGTCATTT+TGG + chr2_1:628454-628473 Msa0186000:intron 25.0%
!!! TTGTAATTTTGATGCATTCA+AGG - chr2_1:628510-628529 None:intergenic 25.0%
! TTAGTCCATCAAATTACTAA+CGG - chr2_1:628554-628573 None:intergenic 25.0%
! GGAATCATAACAAACATATA+AGG - chr2_1:628731-628750 None:intergenic 25.0%
! GTTATGATTCCAATTATTTC+AGG + chr2_1:628740-628759 Msa0186000:intron 25.0%
! TATGTCTTTCATATTCTTGT+AGG + chr2_1:628772-628791 Msa0186000:intron 25.0%
! CCTTGAGAAAATTATCAAAT+GGG - chr2_1:628868-628887 None:intergenic 25.0%
! TCTAAGAACTATGTAAATCT+TGG + chr2_1:629029-629048 Msa0186000:three_prime_UTR 25.0%
AATTATTACATTTCACACCG+GGG + chr2_1:621637-621656 Msa0186000:five_prime_UTR 30.0%
AACACTTCTCAGTTTCAATT+TGG + chr2_1:622021-622040 Msa0186000:intron 30.0%
CTGTTATTGAGTATGTTCTT+TGG + chr2_1:622066-622085 Msa0186000:intron 30.0%
!!! ACATTTTTTGTTCTCTCAGT+TGG + chr2_1:622194-622213 Msa0186000:intron 30.0%
!!! CATTTTTTGTTCTCTCAGTT+GGG + chr2_1:622195-622214 Msa0186000:intron 30.0%
TTGGGAATTGTGTAGAAAAT+GGG + chr2_1:622213-622232 Msa0186000:exon 30.0%
!!! GGATCATAATGGTTTTGAAA+AGG - chr2_1:622489-622508 None:intergenic 30.0%
AAAAAAAAAAAAGGGCAACC+CGG + chr2_1:622599-622618 Msa0186000:intron 30.0%
ATTGGTTAGAATGACAATAC+AGG - chr2_1:622797-622816 None:intergenic 30.0%
CATGTTATACAATACTTCTC+AGG + chr2_1:622913-622932 Msa0186000:intron 30.0%
AAATAGGATGTGCTTGAATT+AGG + chr2_1:623076-623095 Msa0186000:intron 30.0%
TGATGTGCTTAATGTAACTT+CGG + chr2_1:623434-623453 Msa0186000:CDS 30.0%
CTATTAGATCGATGTATACT+TGG + chr2_1:623597-623616 Msa0186000:intron 30.0%
CACTCATAACATTGAGAAAT+TGG + chr2_1:623720-623739 Msa0186000:CDS 30.0%
! TTCTGATTTTGCATGTTTTC+TGG + chr2_1:623872-623891 Msa0186000:intron 30.0%
!!! CATTTTTGCTGATTTTGATG+AGG + chr2_1:623991-624010 Msa0186000:CDS 30.0%
GAGTCAGAATGATTTATATG+AGG - chr2_1:624034-624053 None:intergenic 30.0%
CTATCAATCAAAGAAACACA+CGG - chr2_1:624097-624116 None:intergenic 30.0%
TCAGATTCACCATGAAAATT+TGG - chr2_1:624126-624145 None:intergenic 30.0%
CCAATCATAGTTATCTAAAG+TGG - chr2_1:624219-624238 None:intergenic 30.0%
CCACTTTAGATAACTATGAT+TGG + chr2_1:624216-624235 Msa0186000:CDS 30.0%
CTCTTGAGTAAATAAATACC+TGG - chr2_1:624408-624427 None:intergenic 30.0%
GCTAAAAAAGGCCTATTAAT+CGG - chr2_1:624431-624450 None:intergenic 30.0%
TAGAGAAGAAATTGAAAAGC+CGG + chr2_1:624529-624548 Msa0186000:intron 30.0%
AAATTGAAAAGCCGGAAATA+TGG + chr2_1:624537-624556 Msa0186000:CDS 30.0%
AATTGAAAAGCCGGAAATAT+GGG + chr2_1:624538-624557 Msa0186000:CDS 30.0%
GTATCAAAGTAGACAAACAT+TGG - chr2_1:624632-624651 None:intergenic 30.0%
TGTTTGTCTACTTTGATACA+AGG + chr2_1:624633-624652 Msa0186000:CDS 30.0%
GCAATTTATGCAAAAGTAGT+GGG - chr2_1:624742-624761 None:intergenic 30.0%
AGCAATTTATGCAAAAGTAG+TGG - chr2_1:624743-624762 None:intergenic 30.0%
ACAGTTATGAAGGTAAAACA+CGG - chr2_1:624797-624816 None:intergenic 30.0%
! GTTTTACCTTCATAACTGTA+TGG + chr2_1:624798-624817 Msa0186000:intron 30.0%
ATCATGCAGAAAAAAATGGA+AGG - chr2_1:624890-624909 None:intergenic 30.0%
!!! TTCCATTTTTTTCTGCATGA+TGG + chr2_1:624889-624908 Msa0186000:intron 30.0%
TACCATCATGCAGAAAAAAA+TGG - chr2_1:624894-624913 None:intergenic 30.0%
GCAGAAAAAGGTAAAGATTA+AGG - chr2_1:624921-624940 None:intergenic 30.0%
! TAATCTTTACCTTTTTCTGC+AGG + chr2_1:624921-624940 Msa0186000:intron 30.0%
! AATCTTTACCTTTTTCTGCA+GGG + chr2_1:624922-624941 Msa0186000:intron 30.0%
!! ACTACATAGGATTTAAGTTG+AGG - chr2_1:625011-625030 None:intergenic 30.0%
!! TTTTTCTTTGTTGGTTGACT+AGG + chr2_1:625294-625313 Msa0186000:intron 30.0%
! ACCAGATGGAATATTTTCTA+GGG - chr2_1:625359-625378 None:intergenic 30.0%
!! TATTTTGTTTGTTTGCCTCT+AGG + chr2_1:625693-625712 Msa0186000:intron 30.0%
!! ATTTTGTTTGTTTGCCTCTA+GGG + chr2_1:625694-625713 Msa0186000:intron 30.0%
TTGTTCATGATGACAAAGAA+AGG + chr2_1:625983-626002 Msa0186000:CDS 30.0%
TGTTCATGATGACAAAGAAA+GGG + chr2_1:625984-626003 Msa0186000:CDS 30.0%
AGCTGAGTTTGTAAAAGTTA+GGG - chr2_1:626056-626075 None:intergenic 30.0%
TTGATATTGAATTGGGTTTC+AGG + chr2_1:626191-626210 Msa0186000:intron 30.0%
TCACTTAGCTTCATAACATA+TGG - chr2_1:626219-626238 None:intergenic 30.0%
AAGCTAAGTGAAGATCAAAT+GGG + chr2_1:626228-626247 Msa0186000:CDS 30.0%
GCTATAGCTTCAATATTTGA+AGG - chr2_1:626303-626322 None:intergenic 30.0%
!! GCTAATTGTTTTACGCATAA+AGG + chr2_1:626341-626360 Msa0186000:CDS 30.0%
TTTCTGAATTGAATTCTGTG+TGG + chr2_1:626563-626582 Msa0186000:intron 30.0%
CATACATGAGTTACAAGTTA+CGG - chr2_1:626723-626742 None:intergenic 30.0%
ATGATGCTTGTAAATATTGG+AGG + chr2_1:626740-626759 Msa0186000:intron 30.0%
GATTACAGAGAGAACAAAAA+GGG - chr2_1:626808-626827 None:intergenic 30.0%
TGATTACAGAGAGAACAAAA+AGG - chr2_1:626809-626828 None:intergenic 30.0%
CACGTTATGATATTCCATAT+AGG - chr2_1:626963-626982 None:intergenic 30.0%
AAATTGATATACTCTTCCTC+TGG + chr2_1:627044-627063 Msa0186000:intron 30.0%
AGTATATGCTAAGATGAATG+TGG + chr2_1:627318-627337 Msa0186000:CDS 30.0%
ATAATGTTGACATGGCTAAT+TGG - chr2_1:627375-627394 None:intergenic 30.0%
TAACTTGACAAACTTTACTG+AGG + chr2_1:627453-627472 Msa0186000:CDS 30.0%
AAGAAAAACCAAGAATGTCA+GGG - chr2_1:627532-627551 None:intergenic 30.0%
!! ACATTCTTGGTTTTTCTTCT+TGG + chr2_1:627534-627553 Msa0186000:intron 30.0%
!! TTGGTTTTCTTTTTCTTAGC+TGG + chr2_1:627553-627572 Msa0186000:intron 30.0%
TGGCTATTTGCAACAATTTA+TGG - chr2_1:627994-628013 None:intergenic 30.0%
TAAATTGTTGCAAATAGCCA+TGG + chr2_1:627994-628013 Msa0186000:intron 30.0%
! TGAAAAAGCATATAGCTCAA+CGG + chr2_1:628175-628194 Msa0186000:intron 30.0%
ATCTTCCGTTAGTAATTTGA+TGG + chr2_1:628546-628565 Msa0186000:intron 30.0%
!! CCCATTTGATAATTTTCTCA+AGG + chr2_1:628865-628884 Msa0186000:CDS 30.0%
GCCTTGAGAAAATTATCAAA+TGG - chr2_1:628869-628888 None:intergenic 30.0%
! AATGAATTTCTAGGAATGGT+AGG + chr2_1:628973-628992 Msa0186000:three_prime_UTR 30.0%
TTTCTTAACCAAACAGTTTG+TGG + chr2_1:629089-629108 Msa0186000:three_prime_UTR 30.0%
AACAGATCAAGATTCCATAT+AGG - chr2_1:629119-629138 None:intergenic 30.0%
! TATGGAATCTTGATCTGTTT+TGG + chr2_1:629120-629139 Msa0186000:three_prime_UTR 30.0%
! ATGGAATCTTGATCTGTTTT+GGG + chr2_1:629121-629140 Msa0186000:three_prime_UTR 30.0%
! TATCTGAGTACTAACTGTTT+TGG + chr2_1:629161-629180 Msa0186000:three_prime_UTR 30.0%
! GTTAGTTTGGAAGAAGATCT+GGG - chr2_1:621716-621735 None:intergenic 35.0%
! AGTTAGTTTGGAAGAAGATC+TGG - chr2_1:621717-621736 None:intergenic 35.0%
GATCTTCTTCCAAACTAACT+TGG + chr2_1:621717-621736 Msa0186000:five_prime_UTR 35.0%
TTCTTCCAAACTAACTTGGT+AGG + chr2_1:621721-621740 Msa0186000:intron 35.0%
!! TTTATTCCTTTCTGGTTCGA+CGG + chr2_1:621917-621936 Msa0186000:intron 35.0%
CAGTTGAAATGCAAAATAGG+AGG - chr2_1:622049-622068 None:intergenic 35.0%
GTTGGGAATTGTGTAGAAAA+TGG + chr2_1:622212-622231 Msa0186000:intron 35.0%
TGGGAATTGTGTAGAAAATG+GGG + chr2_1:622214-622233 Msa0186000:exon 35.0%
! AGTTTTCTGTAACGTTTGAC+TGG - chr2_1:622318-622337 None:intergenic 35.0%
! TGATATTTTCCCAAAATCCC+CGG + chr2_1:622344-622363 Msa0186000:CDS 35.0%
!! TATATTTTTGTACCCCTTCC+CGG - chr2_1:622653-622672 None:intergenic 35.0%
! AAGCTTGTTCTTCACTGATA+CGG + chr2_1:622681-622700 Msa0186000:intron 35.0%
AACCAATTGATCATGCTTGT+TGG + chr2_1:622810-622829 Msa0186000:intron 35.0%
!! TTACCATTGACTTGTTCATG+AGG + chr2_1:622875-622894 Msa0186000:intron 35.0%
! ATGCAGCCAAAAATCCTTTT+CGG + chr2_1:622978-622997 Msa0186000:CDS 35.0%
! TGGAATCCGAAAAGGATTTT+TGG - chr2_1:622987-623006 None:intergenic 35.0%
! AAATCCTTTTCGGATTCCAA+AGG + chr2_1:622988-623007 Msa0186000:CDS 35.0%
!! AATACCTTTGGAATCCGAAA+AGG - chr2_1:622995-623014 None:intergenic 35.0%
TCAAAGAAGAGGAGGAAAAT+AGG + chr2_1:623060-623079 Msa0186000:intron 35.0%
TTACATCTGCGTCTTACAAA+TGG - chr2_1:623241-623260 None:intergenic 35.0%
AGATGAACCTTGTTAGAGAT+TGG - chr2_1:623506-623525 None:intergenic 35.0%
CACTAATTACCATTGCTGAA+AGG - chr2_1:623825-623844 None:intergenic 35.0%
!!! TTTCACTACCTTTTTTTGGC+AGG + chr2_1:623943-623962 Msa0186000:intron 35.0%
ATGGCAGTTTCAAAATGGTT+GGG - chr2_1:624070-624089 None:intergenic 35.0%
AATGGCAGTTTCAAAATGGT+TGG - chr2_1:624071-624090 None:intergenic 35.0%
GCATAATGGCAGTTTCAAAA+TGG - chr2_1:624075-624094 None:intergenic 35.0%
TCATCATAATTGGGTGAATG+AGG + chr2_1:624277-624296 Msa0186000:CDS 35.0%
TTACTCAAGAGCCGATTAAT+AGG + chr2_1:624417-624436 Msa0186000:intron 35.0%
CATATTTGAGCCCATATTTC+CGG - chr2_1:624551-624570 None:intergenic 35.0%
! AAGATTGGTTGAATTAGCCA+AGG + chr2_1:624577-624596 Msa0186000:CDS 35.0%
TTGCATAAATTGCTTTGCAG+CGG + chr2_1:624749-624768 Msa0186000:intron 35.0%
!!! TTAGCAGAGATTGGTTTTGT+TGG + chr2_1:625077-625096 Msa0186000:CDS 35.0%
TTGTTCTCCAACAAATTCAC+TGG - chr2_1:625141-625160 None:intergenic 35.0%
AGCAATTCTCAATGGAACTT+TGG - chr2_1:625187-625206 None:intergenic 35.0%
TTCCATTGAGAATTGCTTAC+TGG + chr2_1:625190-625209 Msa0186000:CDS 35.0%
TTCCAGTAAGCAATTCTCAA+TGG - chr2_1:625195-625214 None:intergenic 35.0%
ATTGCCATCAAGTCAAATAG+TGG - chr2_1:625334-625353 None:intergenic 35.0%
ACCCTAGAAAATATTCCATC+TGG + chr2_1:625355-625374 Msa0186000:CDS 35.0%
! CACCAGATGGAATATTTTCT+AGG - chr2_1:625360-625379 None:intergenic 35.0%
!! AATATTCCATCTGGTGTTGT+TGG + chr2_1:625364-625383 Msa0186000:CDS 35.0%
! ATTTGAAGTACAACGACTGT+TGG - chr2_1:625497-625516 None:intergenic 35.0%
GACACAGCTACTAAAATGTT+TGG - chr2_1:625525-625544 None:intergenic 35.0%
AGCTGTGTCAATAATATCTG+AGG + chr2_1:625536-625555 Msa0186000:intron 35.0%
TTTAAGAGAATGTGTCTTGG+TGG - chr2_1:625585-625604 None:intergenic 35.0%
ATATGGATCAGCGCAATAAA+AGG + chr2_1:625863-625882 Msa0186000:CDS 35.0%
GCTGAGTTTGTAAAAGTTAG+GGG - chr2_1:626055-626074 None:intergenic 35.0%
GAGCTGAGTTTGTAAAAGTT+AGG - chr2_1:626057-626076 None:intergenic 35.0%
AACTCAGCTCAATCATTGAT+AGG + chr2_1:626067-626086 Msa0186000:CDS 35.0%
ACTCAGCTCAATCATTGATA+GGG + chr2_1:626068-626087 Msa0186000:CDS 35.0%
ATCTCAAAGTTTGACTGATG+TGG + chr2_1:626098-626117 Msa0186000:CDS 35.0%
GAAGCTAAGTGAAGATCAAA+TGG + chr2_1:626227-626246 Msa0186000:CDS 35.0%
!! AAGATTGGCTTGAATCCAAA+AGG - chr2_1:626268-626287 None:intergenic 35.0%
AGGTAAGTTATCAGGAAGAT+TGG - chr2_1:626283-626302 None:intergenic 35.0%
!!! GCATAAAGGTAGTTTTGTCT+GGG + chr2_1:626355-626374 Msa0186000:intron 35.0%
ACATTGTATTCTCTTCACGT+TGG + chr2_1:626652-626671 Msa0186000:intron 35.0%
! TATTGGAGGCTCATTTTCAT+AGG + chr2_1:626754-626773 Msa0186000:intron 35.0%
! CCAGGTTATCTTTGTCTTTT+AGG - chr2_1:626874-626893 None:intergenic 35.0%
CCTAAAAGACAAAGATAACC+TGG + chr2_1:626871-626890 Msa0186000:CDS 35.0%
TATAGGTCGTACCATTACTT+GGG - chr2_1:626946-626965 None:intergenic 35.0%
ATATAGGTCGTACCATTACT+TGG - chr2_1:626947-626966 None:intergenic 35.0%
AAGTAATGGTACGACCTATA+TGG + chr2_1:626946-626965 Msa0186000:intron 35.0%
CTTTCTGCTTCCATATAATC+AGG + chr2_1:627261-627280 Msa0186000:intron 35.0%
AACGGATCAACCTGATTATA+TGG - chr2_1:627274-627293 None:intergenic 35.0%
AATGTGGATTTGAGAGAGTA+TGG + chr2_1:627334-627353 Msa0186000:CDS 35.0%
CAACTCAGATAATGTTGACA+TGG - chr2_1:627383-627402 None:intergenic 35.0%
TGTCAACATTATCTGAGTTG+AGG + chr2_1:627383-627402 Msa0186000:CDS 35.0%
! TCAAAGCATTCATTATGGTC+TGG - chr2_1:627429-627448 None:intergenic 35.0%
GAAGAAAAACCAAGAATGTC+AGG - chr2_1:627533-627552 None:intergenic 35.0%
TTCTGATCAAGAATTGACTG+TGG - chr2_1:627644-627663 None:intergenic 35.0%
TTATTCTCAAGAGTCGTTGT+CGG + chr2_1:627676-627695 Msa0186000:CDS 35.0%
!! TCTTTGGAATGAATCGAGAA+AGG - chr2_1:627858-627877 None:intergenic 35.0%
! TATCAGCATTGGACAACTTA+TGG + chr2_1:627906-627925 Msa0186000:CDS 35.0%
CATTGGACAACTTATGGAAT+CGG + chr2_1:627912-627931 Msa0186000:CDS 35.0%
GAAGAAGCTTTCAAATTGGT+TGG + chr2_1:628320-628339 Msa0186000:CDS 35.0%
TATCAGGTGATTGAGTGTAA+TGG - chr2_1:628356-628375 None:intergenic 35.0%
!!! CATTTTGGTTCCTAAATGTG+AGG + chr2_1:628469-628488 Msa0186000:intron 35.0%
ACTAACGGAAGATAGATTTG+AGG - chr2_1:628539-628558 None:intergenic 35.0%
! TTTTGGTCCATGAATGTGTA+TGG - chr2_1:628645-628664 None:intergenic 35.0%
TACACATTCATGGACCAAAA+TGG + chr2_1:628645-628664 Msa0186000:intron 35.0%
! AATAGAGTAAAGGGCCATTT+TGG - chr2_1:628662-628681 None:intergenic 35.0%
! ATTCTTGTAGGAAGCATATG+AGG + chr2_1:628784-628803 Msa0186000:intron 35.0%
!! AAATTATCAAATGGGCTAGC+AGG - chr2_1:628860-628879 None:intergenic 35.0%
!! AATCTTGATCTGTTTTGGGT+GGG + chr2_1:629125-629144 Msa0186000:three_prime_UTR 35.0%
!!! ACTAACTGTTTTGGAGTCAA+TGG + chr2_1:629170-629189 Msa0186000:three_prime_UTR 35.0%
!!! CTAACTGTTTTGGAGTCAAT+GGG + chr2_1:629171-629190 Msa0186000:three_prime_UTR 35.0%
!!! TAACTGTTTTGGAGTCAATG+GGG + chr2_1:629172-629191 Msa0186000:three_prime_UTR 35.0%
! AGAAGGTTGTTGTTCAGGAA+TGG - chr2_1:621668-621687 None:intergenic 40.0%
GTAGTCCTACCAAGTTAGTT+TGG - chr2_1:621729-621748 None:intergenic 40.0%
GGGAATTGTGTAGAAAATGG+GGG + chr2_1:622215-622234 Msa0186000:exon 40.0%
TTGAATGTAACCACGTGTGT+TGG + chr2_1:622421-622440 Msa0186000:intron 40.0%
! GCTGTGTTATTCTCATTGCA+AGG + chr2_1:622552-622571 Msa0186000:intron 40.0%
CACCAACAAGCATGATCAAT+TGG - chr2_1:622815-622834 None:intergenic 40.0%
CAACCTCATGAACAAGTCAA+TGG - chr2_1:622881-622900 None:intergenic 40.0%
AGGATGAGCTTCCAAATGAA+AGG + chr2_1:622933-622952 Msa0186000:intron 40.0%
TAATGTAACTTCGGAGCTCT+TGG + chr2_1:623443-623462 Msa0186000:CDS 40.0%
TTGGTTGCCAATCTCTAACA+AGG + chr2_1:623496-623515 Msa0186000:CDS 40.0%
AACAAGGTTCATCTACTGTC+AGG + chr2_1:623512-623531 Msa0186000:CDS 40.0%
CTGCACATTCATTGTGTAAG+TGG - chr2_1:623686-623705 None:intergenic 40.0%
CACTTACACAATGAATGTGC+AGG + chr2_1:623684-623703 Msa0186000:intron 40.0%
! GAAAGTATGCATGCTATCAC+AGG + chr2_1:623747-623766 Msa0186000:CDS 40.0%
! CCTCAAACAGCAGTTTTCAT+GGG - chr2_1:623785-623804 None:intergenic 40.0%
! CCATGAAAACTGCTGTTTGA+GGG + chr2_1:623783-623802 Msa0186000:CDS 40.0%
!!! CTACCTTTTTTTGGCAGGTT+TGG + chr2_1:623948-623967 Msa0186000:intron 40.0%
GAACCAAACCTGCCAAAAAA+AGG - chr2_1:623954-623973 None:intergenic 40.0%
CAAAGAAACACACGGCATAA+TGG - chr2_1:624089-624108 None:intergenic 40.0%
GACAGAGGCTCATCATAATT+GGG + chr2_1:624268-624287 Msa0186000:CDS 40.0%
AAATACCTGGTTAAGAGGGA+AGG - chr2_1:624395-624414 None:intergenic 40.0%
ACTTTGATACAAGGCAACAC+TGG + chr2_1:624642-624661 Msa0186000:CDS 40.0%
CTTTGATACAAGGCAACACT+GGG + chr2_1:624643-624662 Msa0186000:CDS 40.0%
! TCCTCAAAATGGTTTGGCAA+TGG + chr2_1:624667-624686 Msa0186000:CDS 40.0%
! ACCATTGCCAAACCATTTTG+AGG - chr2_1:624671-624690 None:intergenic 40.0%
! TCAAAATGGTTTGGCAATGG+TGG + chr2_1:624670-624689 Msa0186000:CDS 40.0%
! CTTTTTCTGCAGGGAATCAA+CGG + chr2_1:624931-624950 Msa0186000:intron 40.0%
AGCTTCTGTGATACATCATC+TGG + chr2_1:624962-624981 Msa0186000:CDS 40.0%
TGTGGCAACTTGAACTACAT+AGG - chr2_1:625024-625043 None:intergenic 40.0%
AATCTGCATGGCTAAAGATG+TGG - chr2_1:625042-625061 None:intergenic 40.0%
TTAGCCATGCAGATTAGATC+AGG + chr2_1:625047-625066 Msa0186000:CDS 40.0%
TCTACCTGATCTAATCTGCA+TGG - chr2_1:625054-625073 None:intergenic 40.0%
TGCAGATTAGATCAGGTAGA+CGG + chr2_1:625054-625073 Msa0186000:CDS 40.0%
TTCTCCAACAAATTCACTGG+AGG - chr2_1:625138-625157 None:intergenic 40.0%
TGCTTACTGGAAATCGCTAA+TGG + chr2_1:625203-625222 Msa0186000:CDS 40.0%
GCTTACTGGAAATCGCTAAT+GGG + chr2_1:625204-625223 Msa0186000:CDS 40.0%
CTTACTGGAAATCGCTAATG+GGG + chr2_1:625205-625224 Msa0186000:CDS 40.0%
AAGGACTATGAGTGATCCAA+TGG - chr2_1:625398-625417 None:intergenic 40.0%
AGTTGCATGAGAAGAGATTC+AGG - chr2_1:625724-625743 None:intergenic 40.0%
AATGATGCATACAGACGTAG+AGG + chr2_1:625753-625772 Msa0186000:CDS 40.0%
TCATGTGTATGGAAGGAACT+TGG - chr2_1:625820-625839 None:intergenic 40.0%
GGAAACTTCATGTGTATGGA+AGG - chr2_1:625827-625846 None:intergenic 40.0%
GAGAGGAAACTTCATGTGTA+TGG - chr2_1:625831-625850 None:intergenic 40.0%
TCAATCATTGATAGGGCTAC+AGG + chr2_1:626075-626094 Msa0186000:CDS 40.0%
GAGTAGCTGAATTGATCTGT+CGG + chr2_1:626122-626141 Msa0186000:intron 40.0%
!!! CGCATAAAGGTAGTTTTGTC+TGG + chr2_1:626354-626373 Msa0186000:intron 40.0%
!! AATTGTTTTTCGAACCCGAG+TGG + chr2_1:626396-626415 Msa0186000:intron 40.0%
AACATAGTCCAGAGAGATAG+AGG - chr2_1:626917-626936 None:intergenic 40.0%
ATCTCTCTGGACTATGTTGT+TGG + chr2_1:626919-626938 Msa0186000:CDS 40.0%
ATGTTGTTGGACCCAAGTAA+TGG + chr2_1:626932-626951 Msa0186000:CDS 40.0%
AGATAGACCTTTGATACGCA+GGG - chr2_1:627083-627102 None:intergenic 40.0%
AAGATAGACCTTTGATACGC+AGG - chr2_1:627084-627103 None:intergenic 40.0%
TGTATTATCTGTTGGGATGC+TGG + chr2_1:627104-627123 Msa0186000:CDS 40.0%
CACATCGTTAGCAAAATCTG+AGG + chr2_1:627173-627192 Msa0186000:CDS 40.0%
! GTTAGCAAAATCTGAGGTGA+GGG + chr2_1:627179-627198 Msa0186000:intron 40.0%
!! TAATCAGGTTGATCCGTTCT+TGG + chr2_1:627276-627295 Msa0186000:intron 40.0%
!! AATCAGGTTGATCCGTTCTT+GGG + chr2_1:627277-627296 Msa0186000:intron 40.0%
TCATCACTGATACCCAAGAA+CGG - chr2_1:627292-627311 None:intergenic 40.0%
CCAAACACAAAGTCTTCATC+AGG - chr2_1:627620-627639 None:intergenic 40.0%
CCTGATGAAGACTTTGTGTT+TGG + chr2_1:627617-627636 Msa0186000:CDS 40.0%
! CAGGATTTTCCCTCAAATTC+AGG + chr2_1:627793-627812 Msa0186000:intron 40.0%
! GATTTTCCCTCAAATTCAGG+AGG + chr2_1:627796-627815 Msa0186000:CDS 40.0%
TCTTCACCTCCTGAATTTGA+GGG - chr2_1:627805-627824 None:intergenic 40.0%
ATCTTCACCTCCTGAATTTG+AGG - chr2_1:627806-627825 None:intergenic 40.0%
TGTCCAATGCTGATAACATG+AGG - chr2_1:627901-627920 None:intergenic 40.0%
! AATGCAGATTCAGAGTACCA+TGG - chr2_1:628014-628033 None:intergenic 40.0%
! GACTAGCCATAGCGTTATAT+GGG - chr2_1:628272-628291 None:intergenic 40.0%
! TGACTAGCCATAGCGTTATA+TGG - chr2_1:628273-628292 None:intergenic 40.0%
CACGGAAGAAGCTTTCAAAT+TGG + chr2_1:628316-628335 Msa0186000:CDS 40.0%
TTGAGTGTAATGGTTCTCGA+AGG - chr2_1:628346-628365 None:intergenic 40.0%
ATCACCTGATAAGTCGTTTC+TGG + chr2_1:628365-628384 Msa0186000:CDS 40.0%
AGTGACACAACCTCACATTT+AGG - chr2_1:628482-628501 None:intergenic 40.0%
GATAACGCCATACACATTCA+TGG + chr2_1:628635-628654 Msa0186000:intron 40.0%
! TTGTAGGAAGCATATGAGGA+TGG + chr2_1:628788-628807 Msa0186000:intron 40.0%
! GATAATTTTCTCAAGGCTGC+TGG + chr2_1:628872-628891 Msa0186000:CDS 40.0%
TGGATGTTAACTAGCTAGCT+AGG + chr2_1:628892-628911 Msa0186000:exon 40.0%
TAGGCATACCACAAACTGTT+TGG - chr2_1:629100-629119 None:intergenic 40.0%
CAGTTTGTGGTATGCCTATA+TGG + chr2_1:629102-629121 Msa0186000:three_prime_UTR 40.0%
!! GAATCTTGATCTGTTTTGGG+TGG + chr2_1:629124-629143 Msa0186000:three_prime_UTR 40.0%
! GGTGAAGAAGGTTGTTGTTC+AGG - chr2_1:621673-621692 None:intergenic 45.0%
AGTGGTATGGTAGGTGAAGA+AGG - chr2_1:621685-621704 None:intergenic 45.0%
!!! TGTTTTGGTCACTGCCCTTT+TGG + chr2_1:621822-621841 Msa0186000:intron 45.0%
AGAAAACCGTCGAACCAGAA+AGG - chr2_1:621926-621945 None:intergenic 45.0%
AGAAAATGGGGGTCATCTCA+AGG + chr2_1:622226-622245 Msa0186000:exon 45.0%
CTTGATCTTGACCTCAAAGC+AGG - chr2_1:622291-622310 None:intergenic 45.0%
TAACCACGTGTGTTGGACAT+TGG + chr2_1:622428-622447 Msa0186000:intron 45.0%
TTGTTCATGAGGTTGAACCC+TGG + chr2_1:622886-622905 Msa0186000:intron 45.0%
CTTGGACTATTCCAAGGATG+AGG + chr2_1:623461-623480 Msa0186000:CDS 45.0%
TTCCAAGGATGAGGCTATTC+AGG + chr2_1:623470-623489 Msa0186000:CDS 45.0%
! CAGTTTTCATGGGTTTCACC+AGG - chr2_1:623775-623794 None:intergenic 45.0%
! CCCATGAAAACTGCTGTTTG+AGG + chr2_1:623782-623801 Msa0186000:CDS 45.0%
! CCCTCAAACAGCAGTTTTCA+TGG - chr2_1:623786-623805 None:intergenic 45.0%
!! TGAAAGGCATTGCAAGCTTG+AGG - chr2_1:623809-623828 None:intergenic 45.0%
CTTGCAATGCCTTTCAGCAA+TGG + chr2_1:623813-623832 Msa0186000:CDS 45.0%
AAAGTGACGATGCTGACATC+AGG + chr2_1:624246-624265 Msa0186000:CDS 45.0%
GGACAGAGGCTCATCATAAT+TGG + chr2_1:624267-624286 Msa0186000:CDS 45.0%
AGGGAAGGATCCTTTACTTC+TGG - chr2_1:624380-624399 None:intergenic 45.0%
GCAGCTGTAGCAGCTAAAAA+AGG - chr2_1:624443-624462 None:intergenic 45.0%
ACGCATAGTTGTGCTTTCCT+TGG - chr2_1:624597-624616 None:intergenic 45.0%
CACAACTATGCGTCGTGTAT+TGG + chr2_1:624604-624623 Msa0186000:CDS 45.0%
!!! AATGGTGGTTTTGTCGAGGA+TGG + chr2_1:624685-624704 Msa0186000:CDS 45.0%
GGCCTACTTCATTGAGAACA+CGG + chr2_1:624706-624725 Msa0186000:CDS 45.0%
GCCTACTTCATTGAGAACAC+GGG + chr2_1:624707-624726 Msa0186000:CDS 45.0%
ACCCGTGTTCTCAATGAAGT+AGG - chr2_1:624711-624730 None:intergenic 45.0%
!! CGTTGATTCCCTGCAGAAAA+AGG - chr2_1:624933-624952 None:intergenic 45.0%
! TTTTCCGGAGATGTCTGCAA+AGG - chr2_1:625106-625125 None:intergenic 45.0%
ACATCTCCGGAAAAGTTTCC+AGG + chr2_1:625112-625131 Msa0186000:CDS 45.0%
!! GCAGCCACTATTTGACTTGA+TGG + chr2_1:625327-625346 Msa0186000:CDS 45.0%
GTTGTTGGAAGAGCAACCAT+TGG + chr2_1:625379-625398 Msa0186000:CDS 45.0%
GAGATTCAGGAAATCCCTAG+AGG - chr2_1:625711-625730 None:intergenic 45.0%
CACATGAAGTTTCCTCTCTG+CGG + chr2_1:625833-625852 Msa0186000:CDS 45.0%
CATATATCTAGACCGCAGAG+AGG - chr2_1:625848-625867 None:intergenic 45.0%
CTCTCTGCGGTCTAGATATA+TGG + chr2_1:625846-625865 Msa0186000:CDS 45.0%
TTACTTGAAAAGCTCCGCAG+AGG + chr2_1:625925-625944 Msa0186000:CDS 45.0%
GTACCAATGCTGCAGATCAT+GGG + chr2_1:625956-625975 Msa0186000:CDS 45.0%
ATTCCCATGATCTGCAGCAT+TGG - chr2_1:625962-625981 None:intergenic 45.0%
GTCGCAGAAGAATGGAAACA+AGG + chr2_1:626012-626031 Msa0186000:CDS 45.0%
GAAGAATGGAAACAAGGCTG+TGG + chr2_1:626018-626037 Msa0186000:CDS 45.0%
TCCAAAAGGCAGAAAGAAGC+TGG - chr2_1:626254-626273 None:intergenic 45.0%
CAGTAAAGGTGAAACCACTC+GGG - chr2_1:626413-626432 None:intergenic 45.0%
GCAGTAAAGGTGAAACCACT+CGG - chr2_1:626414-626433 None:intergenic 45.0%
GAGTTACAAGTTACGGCCAT+AGG - chr2_1:626716-626735 None:intergenic 45.0%
ATAGAGGAAGCTGGAAGAAG+CGG - chr2_1:626901-626920 None:intergenic 45.0%
TGATATACTCTTCCTCTGGC+AGG + chr2_1:627048-627067 Msa0186000:intron 45.0%
ATAGACCTTTGATACGCAGG+GGG - chr2_1:627081-627100 None:intergenic 45.0%
GATAGACCTTTGATACGCAG+GGG - chr2_1:627082-627101 None:intergenic 45.0%
ACGATGTGAGCACATCATTC+AGG - chr2_1:627161-627180 None:intergenic 45.0%
! CGTTAGCAAAATCTGAGGTG+AGG + chr2_1:627178-627197 Msa0186000:intron 45.0%
TTTCAGCACCCTGACATTCT+TGG + chr2_1:627521-627540 Msa0186000:intron 45.0%
! TAACCTGACTGTGCTACTGT+CGG + chr2_1:627583-627602 Msa0186000:CDS 45.0%
ATGCTGATAACATGAGGCTG+CGG - chr2_1:627895-627914 None:intergenic 45.0%
CAGCCTCATGTTATCAGCAT+TGG + chr2_1:627895-627914 Msa0186000:CDS 45.0%
CTAGTCAGTGTGAATCGCTT+GGG + chr2_1:628286-628305 Msa0186000:CDS 45.0%
AATCGCTTGGGACATGTTCA+CGG + chr2_1:628298-628317 Msa0186000:CDS 45.0%
AAGGCCAGAAACGACTTATC+AGG - chr2_1:628372-628391 None:intergenic 45.0%
TGCGTTACTGTTACGAGCAA+AGG - chr2_1:628391-628410 None:intergenic 45.0%
CAGTAACGCAGCACTTGAAA+AGG + chr2_1:628401-628420 Msa0186000:CDS 45.0%
ACAAGTAGCAGCATTGCCAA+GGG + chr2_1:628817-628836 Msa0186000:CDS 45.0%
!! TTATCAAATGGGCTAGCAGG+AGG - chr2_1:628857-628876 None:intergenic 45.0%
!!! GTTTTGGAGTCAATGGGGTT+TGG + chr2_1:629177-629196 Msa0186000:three_prime_UTR 45.0%
! GTCAATGGGGTTTGGTTACT+TGG + chr2_1:629185-629204 Msa0186000:three_prime_UTR 45.0%
! ATGGGGTTTGGTTACTTGGT+AGG + chr2_1:629189-629208 Msa0186000:three_prime_UTR 45.0%
! TGGGGTTTGGTTACTTGGTA+GGG + chr2_1:629190-629209 Msa0186000:three_prime_UTR 45.0%
!! AAAAAACAATAAAATTTAAT+AGG + chr2_1:628136-628155 Msa0186000:intron 5.0%
GAGTGAGTGAGTGGTATGGT+AGG - chr2_1:621694-621713 None:intergenic 50.0%
AAGATCTGGGAGTGAGTGAG+TGG - chr2_1:621703-621722 None:intergenic 50.0%
CACACATGCTCTCACAAGCT+GGG - chr2_1:622260-622279 None:intergenic 50.0%
ACACACATGCTCTCACAAGC+TGG - chr2_1:622261-622280 None:intergenic 50.0%
!! GTGTTTGCTGTCCTGCTTTG+AGG + chr2_1:622277-622296 Msa0186000:CDS 50.0%
! ACACACGAACCGGGGATTTT+GGG - chr2_1:622356-622375 None:intergenic 50.0%
! AACACACGAACCGGGGATTT+TGG - chr2_1:622357-622376 None:intergenic 50.0%
GTACGATAACACACGAACCG+GGG - chr2_1:622364-622383 None:intergenic 50.0%
GGTACGATAACACACGAACC+GGG - chr2_1:622365-622384 None:intergenic 50.0%
GGGTACGATAACACACGAAC+CGG - chr2_1:622366-622385 None:intergenic 50.0%
TGTCCAATGTCCAACACACG+TGG - chr2_1:622434-622453 None:intergenic 50.0%
GGAGCTCTTGGACTATTCCA+AGG + chr2_1:623455-623474 Msa0186000:CDS 50.0%
TGCCTGAATAGCCTCATCCT+TGG - chr2_1:623475-623494 None:intergenic 50.0%
GATGAGGCTATTCAGGCACT+TGG + chr2_1:623477-623496 Msa0186000:CDS 50.0%
AGGTTGTCCGTAGTGAAAGC+CGG + chr2_1:624297-624316 Msa0186000:CDS 50.0%
TACCAACAACTGAACCAGCC+CGG - chr2_1:624319-624338 None:intergenic 50.0%
CCTTTACTTCTGGTCGTGGT+TGG - chr2_1:624370-624389 None:intergenic 50.0%
CCAACCACGACCAGAAGTAA+AGG + chr2_1:624367-624386 Msa0186000:CDS 50.0%
GGATCCTTTACTTCTGGTCG+TGG - chr2_1:624374-624393 None:intergenic 50.0%
AGGATCCTTCCCTCTTAACC+AGG + chr2_1:624387-624406 Msa0186000:CDS 50.0%
CAACACTGGGCTCCTCAAAA+TGG + chr2_1:624656-624675 Msa0186000:CDS 50.0%
CTGGGCTCCTCAAAATGGTT+TGG + chr2_1:624661-624680 Msa0186000:CDS 50.0%
!!! TGGCAATGGTGGTTTTGTCG+AGG + chr2_1:624681-624700 Msa0186000:CDS 50.0%
GGTAGACGGTTAGCAGAGAT+TGG + chr2_1:625068-625087 Msa0186000:CDS 50.0%
GTGACCTTTGCAGACATCTC+CGG + chr2_1:625099-625118 Msa0186000:CDS 50.0%
! TGGAGGCCTGGAAACTTTTC+CGG - chr2_1:625121-625140 None:intergenic 50.0%
CAACAAATTCACTGGAGGCC+TGG - chr2_1:625133-625152 None:intergenic 50.0%
CAGGCCTCCAGTGAATTTGT+TGG + chr2_1:625131-625150 Msa0186000:CDS 50.0%
GCTCTTCCAACAACACCAGA+TGG - chr2_1:625373-625392 None:intergenic 50.0%
TCGAGCACTCACTTCTGCAT+TGG + chr2_1:625420-625439 Msa0186000:CDS 50.0%
ACAGACGTAGAGGCTCGTAT+TGG + chr2_1:625763-625782 Msa0186000:CDS 50.0%
GGTACCAATGCTGCAGATCA+TGG + chr2_1:625955-625974 Msa0186000:CDS 50.0%
GGGATACAGTCGCAGAAGAA+TGG + chr2_1:626004-626023 Msa0186000:CDS 50.0%
! GCCAGCTTCTTTCTGCCTTT+TGG + chr2_1:626250-626269 Msa0186000:CDS 50.0%
TCCAGCTTCCTCTATCTCTC+TGG + chr2_1:626906-626925 Msa0186000:CDS 50.0%
TCCAGAGAGATAGAGGAAGC+TGG - chr2_1:626910-626929 None:intergenic 50.0%
! AGAGTCGTTGTCGGTTGATG+AGG + chr2_1:627685-627704 Msa0186000:CDS 50.0%
TGATAACATGAGGCTGCGGA+GGG - chr2_1:627891-627910 None:intergenic 50.0%
ACTGGAGGTAGCAAGTCATG+TGG + chr2_1:628218-628237 Msa0186000:CDS 50.0%
GTTATATGGGAGAGGCGAAG+TGG - chr2_1:628259-628278 None:intergenic 50.0%
GCCTCTCCCATATAACGCTA+TGG + chr2_1:628263-628282 Msa0186000:CDS 50.0%
GCCATAGCGTTATATGGGAG+AGG - chr2_1:628267-628286 None:intergenic 50.0%
GCTAGTCAGTGTGAATCGCT+TGG + chr2_1:628285-628304 Msa0186000:CDS 50.0%
! CTTGGCAATGCTGCTACTTG+TGG - chr2_1:628818-628837 None:intergenic 50.0%
CACAAGTAGCAGCATTGCCA+AGG + chr2_1:628816-628835 Msa0186000:CDS 50.0%
TAGCAGGAGGCAACTTCATG+GGG - chr2_1:628844-628863 None:intergenic 50.0%
CTAGCAGGAGGCAACTTCAT+GGG - chr2_1:628845-628864 None:intergenic 50.0%
GTTCAGGAATGGAGAGACCC+CGG - chr2_1:621657-621676 None:intergenic 55.0%
CTGGGAGTGAGTGAGTGGTA+TGG - chr2_1:621698-621717 None:intergenic 55.0%
AAGAGGAGCGACTGCAGGTA+GGG - chr2_1:622728-622747 None:intergenic 55.0%
TGCATGCTATCACAGGAGCC+TGG + chr2_1:623754-623773 Msa0186000:CDS 55.0%
CGATGCTGACATCAGGACAG+AGG + chr2_1:624253-624272 Msa0186000:CDS 55.0%
GGTTGTCCGTAGTGAAAGCC+GGG + chr2_1:624298-624317 Msa0186000:CDS 55.0%
AACCAGCCCGGCTTTCACTA+CGG - chr2_1:624307-624326 None:intergenic 55.0%
GCTGCTACAGCTGCGACAAT+TGG + chr2_1:624449-624468 Msa0186000:intron 55.0%
CAGAAGTGAGTGCTCGAGCA+AGG - chr2_1:625417-625436 None:intergenic 55.0%
CACCTGCTGCACACGTAAGT+TGG - chr2_1:625446-625465 None:intergenic 55.0%
TGGTACCATCTCTGCCTCTG+CGG - chr2_1:625942-625961 None:intergenic 55.0%
TCTCCGACAGTAGCACAGTC+AGG - chr2_1:627589-627608 None:intergenic 55.0%
!! GGAGGGGAAAGAGGCATCTT+TGG - chr2_1:627874-627893 None:intergenic 55.0%
GATAACATGAGGCTGCGGAG+GGG - chr2_1:627890-627909 None:intergenic 55.0%
CTGATAACATGAGGCTGCGG+AGG - chr2_1:627892-627911 None:intergenic 55.0%
ACGGTGCATCCACTGCTTGT+AGG + chr2_1:628194-628213 Msa0186000:intron 55.0%
CATCCACTGCTTGTAGGCAC+TGG + chr2_1:628200-628219 Msa0186000:intron 55.0%
GAGGTAGCAAGTCATGTGGC+AGG + chr2_1:628222-628241 Msa0186000:CDS 55.0%
GCTAGCAGGAGGCAACTTCA+TGG - chr2_1:628846-628865 None:intergenic 55.0%
ATGCGGGAGCTTCAGTGCAC+CGG - chr2_1:622621-622640 None:intergenic 60.0%
ACTGAAGCTCCCGCATACGC+AGG + chr2_1:622625-622644 Msa0186000:intron 60.0%
CTGAAGCTCCCGCATACGCA+GGG + chr2_1:622626-622645 Msa0186000:intron 60.0%
AGAGGAGCGACTGCAGGTAG+GGG - chr2_1:622727-622746 None:intergenic 60.0%
CAAGAGGAGCGACTGCAGGT+AGG - chr2_1:622729-622748 None:intergenic 60.0%
TTGGCAAGAGGAGCGACTGC+AGG - chr2_1:622733-622752 None:intergenic 60.0%
!! AGCCGGGCTGGTTCAGTTGT+TGG + chr2_1:624314-624333 Msa0186000:CDS 60.0%
GGCCAACTTACGTGTGCAGC+AGG + chr2_1:625441-625460 Msa0186000:CDS 60.0%
AAGCTCCGCAGAGGCAGAGA+TGG + chr2_1:625934-625953 Msa0186000:CDS 60.0%
GCTGGAAGAAGCGGATCACC+AGG - chr2_1:626892-626911 None:intergenic 60.0%
CGTTGCCCCCTGCGTATCAA+AGG + chr2_1:627073-627092 Msa0186000:CDS 60.0%
CCTCCAGTGCCTACAAGCAG+TGG - chr2_1:628206-628225 None:intergenic 60.0%
!! CCACTGCTTGTAGGCACTGG+AGG + chr2_1:628203-628222 Msa0186000:intron 60.0%
GGCAACTTCATGGGGTCCCT+TGG - chr2_1:628836-628855 None:intergenic 60.0%
TGCGGGAGCTTCAGTGCACC+GGG - chr2_1:622620-622639 None:intergenic 65.0%
TTCCCGGACCCTGCGTATGC+GGG - chr2_1:622637-622656 None:intergenic 65.0%
CTTCCCGGACCCTGCGTATG+CGG - chr2_1:622638-622657 None:intergenic 65.0%
GCATACGCAGGGTCCGGGAA+GGG + chr2_1:622637-622656 Msa0186000:intron 65.0%
CATACGCAGGGTCCGGGAAG+GGG + chr2_1:622638-622657 Msa0186000:intron 65.0%
GAGGAGCGACTGCAGGTAGG+GGG - chr2_1:622726-622745 None:intergenic 65.0%
GTCCGTAGTGAAAGCCGGGC+TGG + chr2_1:624302-624321 Msa0186000:CDS 65.0%
TGAGGCTGCGGAGGGGAAAG+AGG - chr2_1:627883-627902 None:intergenic 65.0%
GCTCCCGCATACGCAGGGTC+CGG + chr2_1:622631-622650 Msa0186000:intron 70.0%
CTCCCGCATACGCAGGGTCC+GGG + chr2_1:622632-622651 Msa0186000:intron 70.0%
CGCATACGCAGGGTCCGGGA+AGG + chr2_1:622636-622655 Msa0186000:intron 70.0%
GGGGGCAACGTTCCTGCCAG+AGG - chr2_1:627063-627082 None:intergenic 70.0%
Chromosome Type Strat End Strand Name
chr2_1 gene 621601 629218 621601 ID=Msa0186000;Name=Msa0186000
chr2_1 mRNA 621601 629218 621601 ID=Msa0186000-mRNA-1;Parent=Msa0186000;Name=Msa0186000-mRNA-1;_AED=0.11;_eAED=0.11;_QI=156|1|1|1|0.94|0.95|20|317|997
chr2_1 exon 621601 621738 621601 ID=Msa0186000-mRNA-1:exon:126;Parent=Msa0186000-mRNA-1
chr2_1 exon 622213 622365 622213 ID=Msa0186000-mRNA-1:exon:127;Parent=Msa0186000-mRNA-1
chr2_1 exon 622935 623009 622935 ID=Msa0186000-mRNA-1:exon:128;Parent=Msa0186000-mRNA-1
chr2_1 exon 623141 623256 623141 ID=Msa0186000-mRNA-1:exon:129;Parent=Msa0186000-mRNA-1
chr2_1 exon 623419 623533 623419 ID=Msa0186000-mRNA-1:exon:130;Parent=Msa0186000-mRNA-1
chr2_1 exon 623706 623834 623706 ID=Msa0186000-mRNA-1:exon:131;Parent=Msa0186000-mRNA-1
chr2_1 exon 623965 624012 623965 ID=Msa0186000-mRNA-1:exon:132;Parent=Msa0186000-mRNA-1
chr2_1 exon 624206 624408 624206 ID=Msa0186000-mRNA-1:exon:133;Parent=Msa0186000-mRNA-1
chr2_1 exon 624532 624728 624532 ID=Msa0186000-mRNA-1:exon:134;Parent=Msa0186000-mRNA-1
chr2_1 exon 624943 625226 624943 ID=Msa0186000-mRNA-1:exon:135;Parent=Msa0186000-mRNA-1
chr2_1 exon 625316 625462 625316 ID=Msa0186000-mRNA-1:exon:136;Parent=Msa0186000-mRNA-1
chr2_1 exon 625715 626119 625715 ID=Msa0186000-mRNA-1:exon:137;Parent=Msa0186000-mRNA-1
chr2_1 exon 626213 626362 626213 ID=Msa0186000-mRNA-1:exon:138;Parent=Msa0186000-mRNA-1
chr2_1 exon 626869 626953 626869 ID=Msa0186000-mRNA-1:exon:139;Parent=Msa0186000-mRNA-1
chr2_1 exon 627070 627194 627070 ID=Msa0186000-mRNA-1:exon:140;Parent=Msa0186000-mRNA-1
chr2_1 exon 627283 627474 627283 ID=Msa0186000-mRNA-1:exon:141;Parent=Msa0186000-mRNA-1
chr2_1 exon 627572 627706 627572 ID=Msa0186000-mRNA-1:exon:142;Parent=Msa0186000-mRNA-1
chr2_1 exon 627796 627933 627796 ID=Msa0186000-mRNA-1:exon:143;Parent=Msa0186000-mRNA-1
chr2_1 exon 628216 628422 628216 ID=Msa0186000-mRNA-1:exon:144;Parent=Msa0186000-mRNA-1
chr2_1 exon 628794 629218 628794 ID=Msa0186000-mRNA-1:exon:145;Parent=Msa0186000-mRNA-1
chr2_1 five_prime_UTR 621601 621738 621601 ID=Msa0186000-mRNA-1:five_prime_utr;Parent=Msa0186000-mRNA-1
chr2_1 five_prime_UTR 622213 622230 622213 ID=Msa0186000-mRNA-1:five_prime_utr;Parent=Msa0186000-mRNA-1
chr2_1 CDS 622231 622365 622231 ID=Msa0186000-mRNA-1:cds;Parent=Msa0186000-mRNA-1
chr2_1 CDS 622935 623009 622935 ID=Msa0186000-mRNA-1:cds;Parent=Msa0186000-mRNA-1
chr2_1 CDS 623141 623256 623141 ID=Msa0186000-mRNA-1:cds;Parent=Msa0186000-mRNA-1
chr2_1 CDS 623419 623533 623419 ID=Msa0186000-mRNA-1:cds;Parent=Msa0186000-mRNA-1
chr2_1 CDS 623706 623834 623706 ID=Msa0186000-mRNA-1:cds;Parent=Msa0186000-mRNA-1
chr2_1 CDS 623965 624012 623965 ID=Msa0186000-mRNA-1:cds;Parent=Msa0186000-mRNA-1
chr2_1 CDS 624206 624408 624206 ID=Msa0186000-mRNA-1:cds;Parent=Msa0186000-mRNA-1
chr2_1 CDS 624532 624728 624532 ID=Msa0186000-mRNA-1:cds;Parent=Msa0186000-mRNA-1
chr2_1 CDS 624943 625226 624943 ID=Msa0186000-mRNA-1:cds;Parent=Msa0186000-mRNA-1
chr2_1 CDS 625316 625462 625316 ID=Msa0186000-mRNA-1:cds;Parent=Msa0186000-mRNA-1
chr2_1 CDS 625715 626119 625715 ID=Msa0186000-mRNA-1:cds;Parent=Msa0186000-mRNA-1
chr2_1 CDS 626213 626362 626213 ID=Msa0186000-mRNA-1:cds;Parent=Msa0186000-mRNA-1
chr2_1 CDS 626869 626953 626869 ID=Msa0186000-mRNA-1:cds;Parent=Msa0186000-mRNA-1
chr2_1 CDS 627070 627194 627070 ID=Msa0186000-mRNA-1:cds;Parent=Msa0186000-mRNA-1
chr2_1 CDS 627283 627474 627283 ID=Msa0186000-mRNA-1:cds;Parent=Msa0186000-mRNA-1
chr2_1 CDS 627572 627706 627572 ID=Msa0186000-mRNA-1:cds;Parent=Msa0186000-mRNA-1
chr2_1 CDS 627796 627933 627796 ID=Msa0186000-mRNA-1:cds;Parent=Msa0186000-mRNA-1
chr2_1 CDS 628216 628422 628216 ID=Msa0186000-mRNA-1:cds;Parent=Msa0186000-mRNA-1
chr2_1 CDS 628794 628901 628794 ID=Msa0186000-mRNA-1:cds;Parent=Msa0186000-mRNA-1
chr2_1 three_prime_UTR 628902 629218 628902 ID=Msa0186000-mRNA-1:three_prime_utr;Parent=Msa0186000-mRNA-1
Gene Sequence

>Msa0186000

ATGGGGGTCATCTCAAGGAAGATCTTCCCAGCTTGTGAGAGCATGTGTGTTTGCTGTCCTGCTTTGAGGTCAAGATCAAGACAACCAGTCAAACGTTACAGAAAACTTCTTGCTGATATTTTCCCAAAATCCCCGGATGAGCTTCCAAATGAAAGGAAAATTGTCAAATTATGTGAATATGCAGCCAAAAATCCTTTTCGGATTCCAAAGATAGCAAAATATCTTGAAGAAAGATGCTATAAAGAACTGAGATCTGAGCACATCAAACTAGTCAAGATCATAGCAGAATCTTTCAATAAGTTACTTTCCATTTGTAAGACGCAGATCACATATTTCGCTGTTGATGTGCTTAATGTAACTTCGGAGCTCTTGGACTATTCCAAGGATGAGGCTATTCAGGCACTTGGTTGCCAATCTCTAACAAGGTTCATCTACTGTCAGGTAGATTCTACTTACACTCATAACATTGAGAAATTGGTGAAGAAAGTATGCATGCTATCACAGGAGCCTGGTGAAACCCATGAAAACTGCTGTTTGAGGGCCTCAAGCTTGCAATGCCTTTCAGCAATGGTTTGGTTCATGACTGAATTTTCACACATTTTTGCTGATTTTGATGAGATTGTTTATGCCACTTTAGATAACTATGATTGGAGTAGACAAAGTGACGATGCTGACATCAGGACAGAGGCTCATCATAATTGGGTGAATGAGGTTGTCCGTAGTGAAAGCCGGGCTGGTTCAGTTGTTGGTAATGACAATCGCTCTAGTTGCTTGATCATCCAACCACGACCAGAAGTAAAGGATCCTTCCCTCTTAACCAGAGAAGAAATTGAAAAGCCGGAAATATGGGCTCAAATATGCATTCAAAGATTGGTTGAATTAGCCAAGGAAAGCACAACTATGCGTCGTGTATTGGATCCAATGTTTGTCTACTTTGATACAAGGCAACACTGGGCTCCTCAAAATGGTTTGGCAATGGTGGTTTTGTCGAGGATGGCCTACTTCATTGAGAACACGGGGAATCAACGGTTTATTCTAGCTTCTGTGATACATCATCTGGACCACAAAAATGTTATGAATGATCCTCAACTTAAATCCTATGTAGTTCAAGTTGCCACATCTTTAGCCATGCAGATTAGATCAGGTAGACGGTTAGCAGAGATTGGTTTTGTTGGTGACCTTTGCAGACATCTCCGGAAAAGTTTCCAGGCCTCCAGTGAATTTGTTGGAGAACAAGAGTTCAATTTGAATATCTCACTCCAAAGTTCCATTGAGAATTGCTTACTGGAAATCGCTAATGGGGTCATTGATGCGCAGCCACTATTTGACTTGATGGCAATAACCCTAGAAAATATTCCATCTGGTGTTGTTGGAAGAGCAACCATTGGATCACTCATAGTCCTTGCTCGAGCACTCACTTCTGCATTGGCCAACTTACGTGTGCAGCAGGGATTTCCTGAATCTCTTCTCATGCAACTTCTAAAAGTAATGATGCATACAGACGTAGAGGCTCGTATTGGAGCACACCTTATATTTTCTGTACTTCTTTTACCAAGTTCCTTCCATACACATGAAGTTTCCTCTCTGCGGTCTAGATATATGGATCAGCGCAATAAAAGGAATTCTCAGACTGCAACTGCATCTGCTTCAATTACAGCTTTACTTGAAAAGCTCCGCAGAGGCAGAGATGGTACCAATGCTGCAGATCATGGGAATGTTGTTCATGATGACAAAGAAAGGGATACAGTCGCAGAAGAATGGAAACAAGGCTGTGGTTTGAAGACTTCCCCTAACTTTTACAAACTCAGCTCAATCATTGATAGGGCTACAGGATCTCAAAGTTTGACTGATGTGGAACCATATGTTATGAAGCTAAGTGAAGATCAAATGGGCCAGCTTCTTTCTGCCTTTTGGATTCAAGCCAATCTTCCTGATAACTTACCTTCAAATATTGAAGCTATAGCTCATTCATTCATATTAGCGCTAATTGTTTTACGCATAAAGAACCTAAAAGACAAAGATAACCTGGTGATCCGCTTCTTCCAGCTTCCTCTATCTCTCTGGACTATGTTGTTGGACCCAAGTAATGGAACGTTGCCCCCTGCGTATCAAAGGTCTATCTTTGTATTATCTGTTGGGATGCTGGTATTTGCCTGCAAAATATATCAGATTCATGACCTGAATGATGTGCTCACATCGTTAGCAAAATCTGAGGTTGATCCGTTCTTGGGTATCAGTGATGACAATCAAGTATATGCTAAGATGAATGTGGATTTGAGAGAGTATGGTACTGCTTCTGATAACCAATTAGCCATGTCAACATTATCTGAGTTGAGGAACAAAATATCTGAATATCACCAGACCATAATGAATGCTTTGATTCATAACTTGACAAACTTTACTGAGCTGGATGCAGATAACCTGACTGTGCTACTGTCGGAGACATTCAAGCCTGATGAAGACTTTGTGTTTGGTCCACAGTCAATTCTTGATCAGAATCAAATGACTTATTATTCTCAAGAGTCGTTGTCGGTTGATGAGGATTTTCCCTCAAATTCAGGAGGTGAAGATGACGCAATCAGTGAAGCTTCTGTCTCTGACCTTTCTCGATTCATTCCAAAGATGCCTCTTTCCCCTCCGCAGCCTCATGTTATCAGCATTGGACAACTTATGGAATCGGCACTGGAGGTAGCAAGTCATGTGGCAGGAACATCTGTCTCCACTTCGCCTCTCCCATATAACGCTATGGCTAGTCAGTGTGAATCGCTTGGGACATGTTCACGGAAGAAGCTTTCAAATTGGTTGGCCTTCGAGAACCATTACACTCAATCACCTGATAAGTCGTTTCTGGCCTTTGCTCGTAACAGTAACGCAGCACTTGAAAAGGAAGCATATGAGGATGGCAATCCACAAGTAGCAGCATTGCCAAGGGACCCCATGAAGTTGCCTCCTGCTAGCCCATTTGATAATTTTCTCAAGGCTGCTGGATGTTAA
Protein sequence

>Msa0186000

MGVISRKIFPACESMCVCCPALRSRSRQPVKRYRKLLADIFPKSPDELPNERKIVKLCEYAAKNPFRIPKIAKYLEERCYKELRSEHIKLVKIIAESFNKLLSICKTQITYFAVDVLNVTSELLDYSKDEAIQALGCQSLTRFIYCQVDSTYTHNIEKLVKKVCMLSQEPGETHENCCLRASSLQCLSAMVWFMTEFSHIFADFDEIVYATLDNYDWSRQSDDADIRTEAHHNWVNEVVRSESRAGSVVGNDNRSSCLIIQPRPEVKDPSLLTREEIEKPEIWAQICIQRLVELAKESTTMRRVLDPMFVYFDTRQHWAPQNGLAMVVLSRMAYFIENTGNQRFILASVIHHLDHKNVMNDPQLKSYVVQVATSLAMQIRSGRRLAEIGFVGDLCRHLRKSFQASSEFVGEQEFNLNISLQSSIENCLLEIANGVIDAQPLFDLMAITLENIPSGVVGRATIGSLIVLARALTSALANLRVQQGFPESLLMQLLKVMMHTDVEARIGAHLIFSVLLLPSSFHTHEVSSLRSRYMDQRNKRNSQTATASASITALLEKLRRGRDGTNAADHGNVVHDDKERDTVAEEWKQGCGLKTSPNFYKLSSIIDRATGSQSLTDVEPYVMKLSEDQMGQLLSAFWIQANLPDNLPSNIEAIAHSFILALIVLRIKNLKDKDNLVIRFFQLPLSLWTMLLDPSNGTLPPAYQRSIFVLSVGMLVFACKIYQIHDLNDVLTSLAKSEVDPFLGISDDNQVYAKMNVDLREYGTASDNQLAMSTLSELRNKISEYHQTIMNALIHNLTNFTELDADNLTVLLSETFKPDEDFVFGPQSILDQNQMTYYSQESLSVDEDFPSNSGGEDDAISEASVSDLSRFIPKMPLSPPQPHVISIGQLMESALEVASHVAGTSVSTSPLPYNAMASQCESLGTCSRKKLSNWLAFENHYTQSPDKSFLAFARNSNAALEKEAYEDGNPQVAALPRDPMKLPPASPFDNFLKAAGC*