Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0532790 | XP_003607083.1 | 88.267 | 554 | 14 | 6 | 1 | 551 | 1 | 506 | 0.0 | 959 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0532790 | sp|Q8H1F0|BZP29_ARATH | 54.945 | 546 | 139 | 26 | 19 | 519 | 29 | 512 | 1.80e-150 | 446 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0532790 | G7JJX7 | 88.267 | 554 | 14 | 6 | 1 | 551 | 1 | 506 | 0.0 | 959 |
| Gene ID | Type | Classification |
|---|---|---|
| Msa0532790 | TF | bZIP |
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0054730 | Msa0532790 | 0.863931 | 1.750063e-64 | -8.615850e-47 |
| Msa0058440 | Msa0532790 | 0.818709 | 1.701714e-52 | -8.615850e-47 |
| Msa0106370 | Msa0532790 | 0.829443 | 5.132965e-55 | -8.615850e-47 |
| Msa0153000 | Msa0532790 | 0.805699 | 1.177005e-49 | -8.615850e-47 |
| Msa0175320 | Msa0532790 | 0.811024 | 8.611199e-51 | -8.615850e-47 |
| Msa0180070 | Msa0532790 | 0.858646 | 7.143445e-63 | -8.615850e-47 |
| Msa0284120 | Msa0532790 | 0.800384 | 1.478135e-48 | -8.615850e-47 |
| Msa0494620 | Msa0532790 | 0.845981 | 2.892679e-59 | -8.615850e-47 |
| Msa0531970 | Msa0532790 | 0.800520 | 1.387040e-48 | -8.615850e-47 |
| Msa0532790 | Msa0585000 | 0.802099 | 6.587968e-49 | -8.615850e-47 |
| Msa0532790 | Msa0606420 | 0.920758 | 8.521660e-88 | -8.615850e-47 |
| Msa0532790 | Msa0661190 | 0.803367 | 3.605596e-49 | -8.615850e-47 |
| Msa0532790 | Msa0923260 | 0.849082 | 4.062929e-60 | -8.615850e-47 |
| Msa0532790 | Msa0962190 | 0.862553 | 4.671460e-64 | -8.615850e-47 |
| Msa0532790 | Msa0987560 | 0.800780 | 1.227200e-48 | -8.615850e-47 |
| Msa0532790 | Msa1030880 | 0.807142 | 5.840418e-50 | -8.615850e-47 |
| Msa0532790 | Msa1190710 | 0.858462 | 8.102216e-63 | -8.615850e-47 |
| Msa0532790 | Msa1245170 | 0.834952 | 2.225627e-56 | -8.615850e-47 |
| Msa0532790 | Msa1296880 | -0.816786 | 4.620072e-52 | -8.615850e-47 |
| Msa0532790 | Msa1376600 | 0.807034 | 6.157032e-50 | -8.615850e-47 |
| Msa0532790 | Msa1454910 | 0.805068 | 1.595287e-49 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0532790 | MtrunA17_Chr4g0036071 | 88.267 | 554 | 14 | 6 | 1 | 551 | 1 | 506 | 0.0 | 959 |
| Msa0532790 | MtrunA17_Chr1g0156051 | 43.040 | 546 | 186 | 19 | 19 | 513 | 31 | 502 | 5.98e-85 | 274 |
| Msa0532790 | MtrunA17_Chr6g0463571 | 46.341 | 246 | 91 | 7 | 287 | 529 | 76 | 283 | 7.25e-44 | 158 |
| Msa0532790 | MtrunA17_Chr3g0107491 | 55.882 | 170 | 36 | 2 | 351 | 520 | 160 | 290 | 5.85e-43 | 157 |
| Msa0532790 | MtrunA17_Chr2g0329551 | 39.189 | 296 | 93 | 8 | 215 | 504 | 109 | 323 | 2.19e-42 | 157 |
| Msa0532790 | MtrunA17_Chr5g0432701 | 59.028 | 144 | 29 | 1 | 353 | 496 | 144 | 257 | 2.24e-42 | 155 |
| Msa0532790 | MtrunA17_Chr3g0128781 | 56.081 | 148 | 35 | 1 | 349 | 496 | 89 | 206 | 2.68e-40 | 148 |
| Msa0532790 | MtrunA17_Chr2g0306581 | 81.633 | 49 | 9 | 0 | 356 | 404 | 1 | 49 | 5.98e-19 | 82.8 |
| Msa0532790 | MtrunA17_Chr2g0316551 | 49.383 | 81 | 41 | 0 | 366 | 446 | 206 | 286 | 7.41e-16 | 79.3 |
| Msa0532790 | MtrunA17_Chr2g0325131 | 49.383 | 81 | 41 | 0 | 366 | 446 | 189 | 269 | 1.85e-15 | 77.8 |
| Msa0532790 | MtrunA17_Chr4g0040891 | 36.000 | 125 | 57 | 2 | 322 | 446 | 171 | 272 | 3.57e-15 | 77.0 |
| Msa0532790 | MtrunA17_Chr1g0202051 | 37.692 | 130 | 72 | 3 | 322 | 445 | 76 | 202 | 4.76e-14 | 72.8 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0532790 | AT4G38900.2 | 54.945 | 546 | 139 | 26 | 19 | 519 | 29 | 512 | 1.83e-151 | 446 |
| Msa0532790 | AT4G38900.3 | 54.945 | 546 | 139 | 26 | 19 | 519 | 29 | 512 | 1.83e-151 | 446 |
| Msa0532790 | AT4G38900.1 | 54.348 | 552 | 139 | 27 | 19 | 519 | 29 | 518 | 1.96e-148 | 438 |
| Msa0532790 | AT2G21230.4 | 50.415 | 482 | 156 | 17 | 87 | 531 | 72 | 507 | 1.05e-118 | 360 |
| Msa0532790 | AT2G21230.1 | 50.415 | 482 | 156 | 17 | 87 | 531 | 72 | 507 | 1.05e-118 | 360 |
| Msa0532790 | AT2G21230.3 | 50.207 | 482 | 163 | 17 | 87 | 531 | 72 | 513 | 4.67e-118 | 359 |
| Msa0532790 | AT2G21230.2 | 54.962 | 393 | 128 | 15 | 87 | 446 | 72 | 448 | 4.54e-111 | 339 |
| Msa0532790 | AT2G40620.1 | 53.448 | 174 | 50 | 2 | 323 | 496 | 104 | 246 | 4.82e-43 | 157 |
| Msa0532790 | AT1G06850.1 | 54.268 | 164 | 43 | 2 | 339 | 500 | 117 | 250 | 3.54e-42 | 154 |
| Msa0532790 | AT2G31370.5 | 39.394 | 297 | 100 | 8 | 200 | 496 | 83 | 299 | 4.90e-42 | 155 |
| Msa0532790 | AT2G31370.2 | 39.394 | 297 | 100 | 8 | 200 | 496 | 83 | 299 | 1.04e-41 | 155 |
| Msa0532790 | AT2G31370.4 | 39.394 | 297 | 100 | 8 | 200 | 496 | 83 | 299 | 1.04e-41 | 155 |
| Msa0532790 | AT2G31370.1 | 39.394 | 297 | 100 | 8 | 200 | 496 | 83 | 299 | 1.04e-41 | 155 |
| Msa0532790 | AT2G31370.7 | 39.394 | 297 | 100 | 8 | 200 | 496 | 83 | 299 | 1.04e-41 | 155 |
| Msa0532790 | AT2G31370.3 | 39.394 | 297 | 100 | 8 | 200 | 496 | 83 | 299 | 1.04e-41 | 155 |
| Msa0532790 | AT2G31370.6 | 39.394 | 297 | 100 | 8 | 200 | 496 | 83 | 299 | 1.04e-41 | 155 |
| Msa0532790 | AT1G06070.1 | 54.037 | 161 | 42 | 2 | 343 | 501 | 185 | 315 | 1.39e-40 | 152 |
| Msa0532790 | AT1G43700.1 | 44.444 | 216 | 75 | 5 | 294 | 496 | 109 | 292 | 1.93e-39 | 147 |
| Msa0532790 | AT2G12940.1 | 37.327 | 217 | 115 | 4 | 280 | 496 | 68 | 263 | 1.76e-34 | 132 |
| Msa0532790 | AT2G13150.1 | 40.606 | 165 | 90 | 3 | 282 | 446 | 71 | 227 | 2.82e-31 | 122 |
| Msa0532790 | AT1G06850.2 | 65.517 | 87 | 28 | 1 | 339 | 423 | 117 | 203 | 4.63e-25 | 104 |
| Msa0532790 | AT2G12900.1 | 34.682 | 173 | 92 | 3 | 332 | 496 | 72 | 231 | 1.59e-24 | 103 |
| Msa0532790 | AT2G21235.1 | 31.667 | 240 | 124 | 8 | 305 | 530 | 309 | 522 | 1.77e-16 | 82.8 |
| Msa0532790 | AT3G58120.2 | 48.148 | 81 | 42 | 0 | 366 | 446 | 200 | 280 | 7.76e-16 | 78.6 |
| Msa0532790 | AT2G42380.5 | 48.148 | 81 | 42 | 0 | 366 | 446 | 184 | 264 | 1.65e-15 | 77.4 |
| Msa0532790 | AT3G58120.1 | 48.148 | 81 | 42 | 0 | 366 | 446 | 200 | 280 | 2.59e-15 | 77.8 |
| Msa0532790 | AT2G42380.2 | 48.148 | 81 | 42 | 0 | 366 | 446 | 184 | 264 | 4.84e-15 | 76.6 |
Find 156 sgRNAs with CRISPR-Local
Find 304 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| GGTTCAATGCATTAAATTAA+TGG | 0.214107 | 4_1:+7330178 | Msa0532790:three_prime_UTR |
| TTTGGGTTATTTCAGGATAT+TGG | 0.231921 | 4_1:+7327498 | Msa0532790:intron |
| TGCACAACTTACTTTGTTGC+AGG | 0.290633 | 4_1:+7327624 | Msa0532790:CDS |
| ATTTCAGGATATTGGCTAAT+AGG | 0.291092 | 4_1:+7327506 | Msa0532790:intron |
| TGGTGAAAAGGGAAACTAAT+TGG | 0.304245 | 4_1:+7326869 | Msa0532790:CDS |
| ATTATTTATTTACTGATTCA+TGG | 0.307626 | 4_1:+7326285 | Msa0532790:exon |
| GTTGATGTCGCCTGGTAATT+CGG | 0.329202 | 4_1:+7327272 | Msa0532790:CDS |
| GGCATTTGCGGCCGTGAAAC+CGG | 0.329642 | 4_1:-7326517 | None:intergenic |
| GAAGTATTCCTTAGTTGTTA+TGG | 0.341942 | 4_1:+7329898 | Msa0532790:three_prime_UTR |
| TCTAACAGTGATATTCCATT+TGG | 0.349388 | 4_1:+7326769 | Msa0532790:CDS |
| ATCTGAGAGTAAGGTGAAAT+AGG | 0.358249 | 4_1:-7326481 | None:intergenic |
| TTGAAGATGCCGCCTTCGCC+TGG | 0.360481 | 4_1:+7327246 | Msa0532790:CDS |
| TGCTGTTGTTGGAACATCAT+AGG | 0.362730 | 4_1:-7329707 | None:intergenic |
| GCTGATGCTGATGCTGTTGT+TGG | 0.363621 | 4_1:-7329718 | None:intergenic |
| TACTGCTAAAGTTTGGTGTT+TGG | 0.369214 | 4_1:+7328468 | Msa0532790:CDS |
| TTAAATATAAGACGGGAATC+AGG | 0.371866 | 4_1:-7329977 | None:intergenic |
| CCAGTAGGGGCTGTCTGTGC+TGG | 0.377397 | 4_1:+7328437 | Msa0532790:CDS |
| GGAACTTCAACTCACTATTC+TGG | 0.380487 | 4_1:-7327942 | None:intergenic |
| GGCGGAAATGCCGAAGGAGC+AGG | 0.383516 | 4_1:-7326237 | None:intergenic |
| GGGATCTGGTGTGGGTGTGA+TGG | 0.386572 | 4_1:-7326457 | None:intergenic |
| GCCAGAGTTGAAGAAAATTA+TGG | 0.386981 | 4_1:+7327350 | Msa0532790:CDS |
| TTATATTTACTGCTAAAGTT+TGG | 0.387031 | 4_1:+7328461 | Msa0532790:CDS |
| TGGTGATAATCGCGATGATT+TGG | 0.391984 | 4_1:+7327017 | Msa0532790:CDS |
| AAAGAATGAGTTAAAGCAAT+AGG | 0.398703 | 4_1:+7329802 | Msa0532790:CDS |
| CTAATTCGTCGGTGGTGAAA+AGG | 0.403499 | 4_1:+7326857 | Msa0532790:CDS |
| TTGATGTCGCCTGGTAATTC+GGG | 0.403911 | 4_1:+7327273 | Msa0532790:CDS |
| TTGCTACAGCTGAGCTGAAT+GGG | 0.408125 | 4_1:+7329639 | Msa0532790:CDS |
| AATGAGTTAAAGCAATAGGT+TGG | 0.415095 | 4_1:+7329806 | Msa0532790:exon |
| ACTTTGTGACCGAGCTAGAT+AGG | 0.419082 | 4_1:-7329942 | None:intergenic |
| GAAGGGAATAAGAGAAGTGC+AGG | 0.419487 | 4_1:+7327138 | Msa0532790:CDS |
| CCTGTTGTTCCATGGATTGA+AGG | 0.422833 | 4_1:-7327966 | None:intergenic |
| GATAGTATGCAGAGGAGGGA+AGG | 0.429594 | 4_1:+7327120 | Msa0532790:CDS |
| CTGTGTTTGCTGCTGCCAGT+AGG | 0.430922 | 4_1:+7328422 | Msa0532790:CDS |
| TTTGGGAATGGTGAGTTTAG+TGG | 0.431644 | 4_1:+7327327 | Msa0532790:CDS |
| CCTTCAATCCATGGAACAAC+AGG | 0.431813 | 4_1:+7327966 | Msa0532790:CDS |
| CAGCACCTCTTAGCCCGCTT+CGG | 0.433321 | 4_1:-7327408 | None:intergenic |
| TGTGTTTGCTGCTGCCAGTA+GGG | 0.438177 | 4_1:+7328423 | Msa0532790:CDS |
| ATCTGGTGTGGGTGTGATGG+TGG | 0.439152 | 4_1:-7326454 | None:intergenic |
| AAATAGGTGGGATCTGGTGT+GGG | 0.439432 | 4_1:-7326465 | None:intergenic |
| CTTTAACTCATTCTTTGAGT+TGG | 0.442907 | 4_1:-7329795 | None:intergenic |
| ACAACAAATGAACAATCATA+TGG | 0.450801 | 4_1:+7326345 | Msa0532790:CDS |
| CCGCCGTTGATTCCGCTTCG+AGG | 0.450965 | 4_1:+7326817 | Msa0532790:CDS |
| GAGATAAGCGCCTGCTCCTT+CGG | 0.451935 | 4_1:+7326227 | Msa0532790:five_prime_UTR |
| GTACTATGCGACGGCATTTG+CGG | 0.455092 | 4_1:-7326529 | None:intergenic |
| TGCGGAATCATGCAGTTAGA+AGG | 0.459177 | 4_1:-7329671 | None:intergenic |
| AGAGTAGTGTTAATGAGAGT+GGG | 0.468643 | 4_1:+7327097 | Msa0532790:CDS |
| GTGGGGATAGTATGCAGAGG+AGG | 0.468795 | 4_1:+7327115 | Msa0532790:CDS |
| AAGGTGAAATAGGTGGGATC+TGG | 0.472913 | 4_1:-7326471 | None:intergenic |
| GAAGTTCCGCCTTCAATCCA+TGG | 0.476046 | 4_1:+7327957 | Msa0532790:CDS |
| TAATTCGTCGGTGGTGAAAA+GGG | 0.477108 | 4_1:+7326858 | Msa0532790:CDS |
| AAAGCAATAGGTTGGGTTGG+AGG | 0.477774 | 4_1:+7329814 | Msa0532790:exon |
| TCATCCACAACTTCACCTTC+CGG | 0.477852 | 4_1:-7326928 | None:intergenic |
| GAAATAGGTGGGATCTGGTG+TGG | 0.483403 | 4_1:-7326466 | None:intergenic |
| ATGAGTTAAAGCAATAGGTT+GGG | 0.485556 | 4_1:+7329807 | Msa0532790:exon |
| TTTAGTTTGGAGTTTGGGAA+TGG | 0.489226 | 4_1:+7327315 | Msa0532790:CDS |
| CCTGGAGGGTTGATGTCGCC+TGG | 0.490408 | 4_1:+7327264 | Msa0532790:CDS |
| ATAGTATGCAGAGGAGGGAA+GGG | 0.491140 | 4_1:+7327121 | Msa0532790:CDS |
| TGATTATTCATCTGAGAGTA+AGG | 0.492306 | 4_1:-7326490 | None:intergenic |
| GAGAGTAGTGTTAATGAGAG+TGG | 0.492697 | 4_1:+7327096 | Msa0532790:CDS |
| GGTGAAAAGGGAAACTAATT+GGG | 0.494990 | 4_1:+7326870 | Msa0532790:CDS |
| GCAAGTGGAACGAAGACTAA+TGG | 0.496328 | 4_1:+7327048 | Msa0532790:CDS |
| TAAAGTTTGGTGTTTGGCCA+AGG | 0.497313 | 4_1:+7328474 | Msa0532790:CDS |
| GGATCATGCTGACGTTTCCA+TGG | 0.501467 | 4_1:+7326660 | Msa0532790:CDS |
| ATTGCTACAGCTGAGCTGAA+TGG | 0.502115 | 4_1:+7329638 | Msa0532790:CDS |
| CGTTGATTCCGCTTCGAGGA+AGG | 0.502885 | 4_1:+7326821 | Msa0532790:CDS |
| CTCCTATGAACCTACCGCCT+TGG | 0.503147 | 4_1:-7328491 | None:intergenic |
| TCGCCTGGTAATTCGGGTGA+TGG | 0.504421 | 4_1:+7327279 | Msa0532790:CDS |
| TGGGTTGGAGGTTGTGCAGA+CGG | 0.507001 | 4_1:+7329826 | Msa0532790:three_prime_UTR |
| GCATTTGCGGCCGTGAAACC+GGG | 0.507657 | 4_1:-7326516 | None:intergenic |
| TTGGGAATGGTGAGTTTAGT+GGG | 0.509815 | 4_1:+7327328 | Msa0532790:CDS |
| TGCTATGGCTGATCCGAAGC+GGG | 0.511052 | 4_1:+7327395 | Msa0532790:CDS |
| AGCAGAAATCAAAGAGGAGG+TGG | 0.514151 | 4_1:+7326427 | Msa0532790:CDS |
| TGGGGATAGTATGCAGAGGA+GGG | 0.518255 | 4_1:+7327116 | Msa0532790:CDS |
| ACAACGAAGGTTGAAAAGAA+AGG | 0.523815 | 4_1:-7326192 | None:intergenic |
| CGCCTGGTAATTCGGGTGAT+GGG | 0.525812 | 4_1:+7327280 | Msa0532790:CDS |
| TGGTGTTTGGCCAAGGCGGT+AGG | 0.528627 | 4_1:+7328481 | Msa0532790:CDS |
| CTGATCCGAAGCGGGCTAAG+AGG | 0.529672 | 4_1:+7327403 | Msa0532790:CDS |
| GGGAATAAGAGAAGTGCAGG+AGG | 0.532585 | 4_1:+7327141 | Msa0532790:CDS |
| GTTAAAGCAATAGGTTGGGT+TGG | 0.533030 | 4_1:+7329811 | Msa0532790:exon |
| ATAATCAGATCCCGGTTTCA+CGG | 0.535436 | 4_1:+7326506 | Msa0532790:CDS |
| CTGAACCTTGTGTTCTAGCT+CGG | 0.538171 | 4_1:-7327572 | None:intergenic |
| TTCCCATCACCCGAATTACC+AGG | 0.539473 | 4_1:-7327282 | None:intergenic |
| GCTTACGACCATAACAACTA+AGG | 0.542427 | 4_1:-7329906 | None:intergenic |
| GTTGATTCCGCTTCGAGGAA+GGG | 0.544219 | 4_1:+7326822 | Msa0532790:CDS |
| CACCGACTACGAGACACTAT+AGG | 0.545909 | 4_1:+7327172 | Msa0532790:CDS |
| AGTGACGTCACGATCTTCCA+TGG | 0.547547 | 4_1:-7326677 | None:intergenic |
| GACATCAACCCTCCAGGCGA+AGG | 0.547782 | 4_1:-7327258 | None:intergenic |
| TGAGGGACTAATTGAAGCTA+AGG | 0.548511 | 4_1:+7330157 | Msa0532790:three_prime_UTR |
| AATCTTCAGTCTTTGAACTT+CGG | 0.549225 | 4_1:-7329618 | None:intergenic |
| AAGAAATCGTTGTCGCCGGA+AGG | 0.549807 | 4_1:+7326913 | Msa0532790:CDS |
| CCAGCACAGACAGCCCCTAC+TGG | 0.550071 | 4_1:-7328437 | None:intergenic |
| GAAGGGTTTCTAGCAGCAAA+CGG | 0.556191 | 4_1:-7326718 | None:intergenic |
| ACACTATAGGAGTGTTTCGA+TGG | 0.557671 | 4_1:+7327185 | Msa0532790:CDS |
| GCTGTTGTTGGAACATCATA+GGG | 0.558278 | 4_1:-7329706 | None:intergenic |
| GTGTTTGCTGCTGCCAGTAG+GGG | 0.558283 | 4_1:+7328424 | Msa0532790:CDS |
| CATCAACAACAGCAGCAGAA+TGG | 0.558598 | 4_1:+7329767 | Msa0532790:CDS |
| ATCAACCCTCCAGGCGAAGG+CGG | 0.559345 | 4_1:-7327255 | None:intergenic |
| TTCACAATGCCTATCTAGCT+CGG | 0.560008 | 4_1:+7329933 | Msa0532790:three_prime_UTR |
| AGATGCCGCCTTCGCCTGGA+GGG | 0.564178 | 4_1:+7327250 | Msa0532790:CDS |
| GAAGATTCGCGAAACGTGCA+AGG | 0.565171 | 4_1:-7326628 | None:intergenic |
| GAGTAGTGTTAATGAGAGTG+GGG | 0.567227 | 4_1:+7327098 | Msa0532790:CDS |
| CTAGCAGCAAACGGAGGTAA+CGG | 0.571775 | 4_1:-7326709 | None:intergenic |
| AAAACAGTAGAAAATCCAAA+TGG | 0.578268 | 4_1:-7326784 | None:intergenic |
| CTCCTATAGTGTCTCGTAGT+CGG | 0.582206 | 4_1:-7327174 | None:intergenic |
| TGAGAGTAAGGTGAAATAGG+TGG | 0.582251 | 4_1:-7326478 | None:intergenic |
| CCAGGCGACATCAACCCTCC+AGG | 0.583954 | 4_1:-7327264 | None:intergenic |
| CTTCCTCGAAGCGGAATCAA+CGG | 0.584470 | 4_1:-7326820 | None:intergenic |
| CATTTCCGAGCTAGAACACA+AGG | 0.584550 | 4_1:+7327567 | Msa0532790:CDS |
| AAGATGCCGCCTTCGCCTGG+AGG | 0.587385 | 4_1:+7327249 | Msa0532790:CDS |
| GAGAGTAAGGTGAAATAGGT+GGG | 0.588611 | 4_1:-7326477 | None:intergenic |
| GCAACTTCCCTTCCTCGAAG+CGG | 0.591727 | 4_1:-7326829 | None:intergenic |
| AACGTGCAAGGGCTGAGAGG+CGG | 0.597136 | 4_1:-7326616 | None:intergenic |
| GGAGAAGAAATCGTTGTCGC+CGG | 0.600332 | 4_1:+7326909 | Msa0532790:CDS |
| TCAGATGAATAATCAGATCC+CGG | 0.607400 | 4_1:+7326498 | Msa0532790:CDS |
| AGAGTGGGGATAGTATGCAG+AGG | 0.609195 | 4_1:+7327112 | Msa0532790:CDS |
| GTCAGCATGATCCGACGTGG+AGG | 0.611432 | 4_1:-7326650 | None:intergenic |
| AGTAGCAGAAATCAAAGAGG+AGG | 0.611642 | 4_1:+7326424 | Msa0532790:CDS |
| TGATGCATTAAACTGTGGTA+TGG | 0.613604 | 4_1:-7326377 | None:intergenic |
| GATTTGGATAGTAGAGCAAG+TGG | 0.614449 | 4_1:+7327033 | Msa0532790:CDS |
| GATCGTGTGTGGGAAGGTGT+AGG | 0.618822 | 4_1:-7326556 | None:intergenic |
| TTGGGAATATAGTAATGTAG+AGG | 0.618930 | 4_1:+7326888 | Msa0532790:CDS |
| AAAACTTGCTGAGATTGCTA+TGG | 0.624523 | 4_1:+7327380 | Msa0532790:CDS |
| GATTGAAAGAAATACCATCT+CGG | 0.625004 | 4_1:-7327996 | None:intergenic |
| GAGAGTGATCGTGTGTGGGA+AGG | 0.627896 | 4_1:-7326562 | None:intergenic |
| TTGTCTAATAGCTCTGAATG+AGG | 0.632805 | 4_1:+7329586 | Msa0532790:intron |
| GTTGAGAGAGTGATCGTGTG+TGG | 0.632845 | 4_1:-7326567 | None:intergenic |
| TGTATGCAGAGAGATTCAGT+TGG | 0.633937 | 4_1:+7327910 | Msa0532790:intron |
| TTCGGGTGATGGGAATTCAG+TGG | 0.634358 | 4_1:+7327290 | Msa0532790:CDS |
| TGCTACAGCTGAGCTGAATG+GGG | 0.641201 | 4_1:+7329640 | Msa0532790:CDS |
| AGTTGCTAAACCTAATTCGT+CGG | 0.641686 | 4_1:+7326846 | Msa0532790:CDS |
| GTTAGTAGCAGAAATCAAAG+AGG | 0.645697 | 4_1:+7326421 | Msa0532790:CDS |
| GTTGTTCCATGGATTGAAGG+CGG | 0.649555 | 4_1:-7327963 | None:intergenic |
| TGCTAAACCTAATTCGTCGG+TGG | 0.650048 | 4_1:+7326849 | Msa0532790:CDS |
| CGAAACGTGCAAGGGCTGAG+AGG | 0.651618 | 4_1:-7326619 | None:intergenic |
| GTAGGACTTGTACTATGCGA+CGG | 0.653735 | 4_1:-7326538 | None:intergenic |
| GCAACAACATTGAAAAGCGG+CGG | 0.654032 | 4_1:-7326255 | None:intergenic |
| TTGCTATGGCTGATCCGAAG+CGG | 0.654077 | 4_1:+7327394 | Msa0532790:CDS |
| GAATATCACTGTTAGAACGC+CGG | 0.656847 | 4_1:-7326762 | None:intergenic |
| TCGCGAATCTTCCTCCACGT+CGG | 0.657479 | 4_1:+7326639 | Msa0532790:CDS |
| AAAAGCGGCGGAAATGCCGA+AGG | 0.659034 | 4_1:-7326243 | None:intergenic |
| CAACAGGCAAAACTCCGAGA+TGG | 0.660037 | 4_1:+7327982 | Msa0532790:CDS |
| TGCCGCCGAGAAAATCTCAC+CGG | 0.660992 | 4_1:+7326743 | Msa0532790:CDS |
| AAGTTGTGCAGAAAGTGTAG+TGG | 0.665732 | 4_1:-7327611 | None:intergenic |
| AAGATTCGCGAAACGTGCAA+GGG | 0.666107 | 4_1:-7326627 | None:intergenic |
| TTGAGAGAGTGATCGTGTGT+GGG | 0.674945 | 4_1:-7326566 | None:intergenic |
| ACAGCAACAACATTGAAAAG+CGG | 0.677679 | 4_1:-7326258 | None:intergenic |
| GTCGCCGGAAGGTGAAGTTG+TGG | 0.681642 | 4_1:+7326924 | Msa0532790:CDS |
| AGTGGAACGAAGACTAATGG+TGG | 0.685995 | 4_1:+7327051 | Msa0532790:CDS |
| ATAGGGTTGACAGAATGTTG+CGG | 0.688253 | 4_1:-7329689 | None:intergenic |
| AACGTCAGCATGATCCGACG+TGG | 0.690918 | 4_1:-7326653 | None:intergenic |
| AGTTTGGTGTTTGGCCAAGG+CGG | 0.692491 | 4_1:+7328477 | Msa0532790:CDS |
| CCTCGAAGCGGAATCAACGG+CGG | 0.693770 | 4_1:-7326817 | None:intergenic |
| GGGTTTCTAGCAGCAAACGG+AGG | 0.701318 | 4_1:-7326715 | None:intergenic |
| AGATGACTATTAGTACTACA+CGG | 0.704110 | 4_1:-7326080 | None:intergenic |
| CGCTACTGTGAAGACAACGA+AGG | 0.705455 | 4_1:-7326205 | None:intergenic |
| TGTGATGATGCATTAAACTG+TGG | 0.744086 | 4_1:-7326382 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | TGAAATTCAAATTAATATTA+AGG | - | chr4_1:7328778-7328797 | None:intergenic | 10.0% |
| !!! | ATTATTTATTTACTGATTCA+TGG | + | chr4_1:7326285-7326304 | Msa0532790:exon | 15.0% |
| !! | TCTTACATTAATAAAATCTA+TGG | - | chr4_1:7328121-7328140 | None:intergenic | 15.0% |
| !!! | TAGATTTTATTAATGTAAGA+AGG | + | chr4_1:7328121-7328140 | Msa0532790:intron | 15.0% |
| !!! | AGATTTTATTAATGTAAGAA+GGG | + | chr4_1:7328122-7328141 | Msa0532790:intron | 15.0% |
| !!! | TCATAGAATTTTTAAAAATG+TGG | + | chr4_1:7328191-7328210 | Msa0532790:intron | 15.0% |
| !!! | ATGTTTTTCTTTTTTTGAAT+CGG | - | chr4_1:7328657-7328676 | None:intergenic | 15.0% |
| !! | AAATTAATATTAAGGAAAAC+TGG | - | chr4_1:7328770-7328789 | None:intergenic | 15.0% |
| !! | TTTGAACATGAATTAATAAA+GGG | - | chr4_1:7328985-7329004 | None:intergenic | 15.0% |
| !! | ATTTGAACATGAATTAATAA+AGG | - | chr4_1:7328986-7329005 | None:intergenic | 15.0% |
| !!! | CTATATTTTAAATATAAGAC+GGG | - | chr4_1:7329987-7330006 | None:intergenic | 15.0% |
| !!! | GCTATATTTTAAATATAAGA+CGG | - | chr4_1:7329988-7330007 | None:intergenic | 15.0% |
| !!! | TTTTTCTGCTTATATGAATT+TGG | + | chr4_1:7326954-7326973 | Msa0532790:CDS | 20.0% |
| !! | TTTAGTTAGTATTGTCAATA+TGG | + | chr4_1:7327450-7327469 | Msa0532790:intron | 20.0% |
| !!! | ATTTTGACTTGGATATTTTT+TGG | + | chr4_1:7327480-7327499 | Msa0532790:intron | 20.0% |
| !!! | TTTTGACTTGGATATTTTTT+GGG | + | chr4_1:7327481-7327500 | Msa0532790:intron | 20.0% |
| !!! | TATTATAGCTTCTTTGTTTT+CGG | + | chr4_1:7327788-7327807 | Msa0532790:intron | 20.0% |
| !!! | AAATCATGTTGATAATGTTT+TGG | + | chr4_1:7327811-7327830 | Msa0532790:intron | 20.0% |
| !!! | AATCATGTTGATAATGTTTT+GGG | + | chr4_1:7327812-7327831 | Msa0532790:intron | 20.0% |
| !!! | TTTCAATCTCTCATTTTTTA+AGG | + | chr4_1:7328020-7328039 | Msa0532790:intron | 20.0% |
| !!! | GATTTTATTAATGTAAGAAG+GGG | + | chr4_1:7328123-7328142 | Msa0532790:intron | 20.0% |
| !!! | ATTTTATTAATGTAAGAAGG+GGG | + | chr4_1:7328124-7328143 | Msa0532790:intron | 20.0% |
| !!! | AATTTTTAAAAATGTGGTGA+GGG | + | chr4_1:7328197-7328216 | Msa0532790:intron | 20.0% |
| !! | TTATATTTACTGCTAAAGTT+TGG | + | chr4_1:7328461-7328480 | Msa0532790:CDS | 20.0% |
| !!! | CTATGAGAAAAATCATATTT+TGG | + | chr4_1:7328893-7328912 | Msa0532790:intron | 20.0% |
| !! | TAATTCATGTTCAAATTTCT+TGG | + | chr4_1:7328990-7329009 | Msa0532790:intron | 20.0% |
| !! | AATTCATGTTCAAATTTCTT+GGG | + | chr4_1:7328991-7329010 | Msa0532790:intron | 20.0% |
| !! | TTTGTAGTTTCATAAAATCA+CGG | + | chr4_1:7329138-7329157 | Msa0532790:intron | 20.0% |
| !! | ATCCTATTATAACATCTATT+TGG | + | chr4_1:7329218-7329237 | Msa0532790:intron | 20.0% |
| !! | AACCAAATAGATGTTATAAT+AGG | - | chr4_1:7329223-7329242 | None:intergenic | 20.0% |
| !! | AAACATAATTAGCTATGTAA+AGG | - | chr4_1:7329299-7329318 | None:intergenic | 20.0% |
| !!! | GTGTTACAAACTTTATTTTT+TGG | + | chr4_1:7330087-7330106 | Msa0532790:three_prime_UTR | 20.0% |
| !!! | TGTTGTTTTTATATTCAAAC+TGG | + | chr4_1:7330126-7330145 | Msa0532790:three_prime_UTR | 20.0% |
| ! | ACAACAAATGAACAATCATA+TGG | + | chr4_1:7326345-7326364 | Msa0532790:CDS | 25.0% |
| ! | AAAACAGTAGAAAATCCAAA+TGG | - | chr4_1:7326787-7326806 | None:intergenic | 25.0% |
| ! | AATTAACGATGATAAAAACG+CGG | + | chr4_1:7326990-7327009 | Msa0532790:CDS | 25.0% |
| !!! | TTTCGATGGATAGTTTTATT+GGG | + | chr4_1:7327199-7327218 | Msa0532790:CDS | 25.0% |
| !!! | GATATTTTTTGGGTTATTTC+AGG | + | chr4_1:7327491-7327510 | Msa0532790:intron | 25.0% |
| !! | TGCAACTCATTTTATGTTTA+TGG | + | chr4_1:7328063-7328082 | Msa0532790:intron | 25.0% |
| !!! | GAATTTTTAAAAATGTGGTG+AGG | + | chr4_1:7328196-7328215 | Msa0532790:intron | 25.0% |
| ! | AAACAATTGAACATCAGTAA+TGG | - | chr4_1:7328955-7328974 | None:intergenic | 25.0% |
| ! | ATTCATGTTCAAATTTCTTG+GGG | + | chr4_1:7328992-7329011 | Msa0532790:intron | 25.0% |
| !! | TTTTCTTTATGTAGGTTACT+TGG | + | chr4_1:7329045-7329064 | Msa0532790:intron | 25.0% |
| ! | TATGTTTGTAAGAGTTACTA+CGG | + | chr4_1:7329312-7329331 | Msa0532790:intron | 25.0% |
| !! | TTGTTGTTGATGAGATATTA+TGG | - | chr4_1:7329458-7329477 | None:intergenic | 25.0% |
| ! | AAAGAATGAGTTAAAGCAAT+AGG | + | chr4_1:7329802-7329821 | Msa0532790:CDS | 25.0% |
| ! | GGTTCAATGCATTAAATTAA+TGG | + | chr4_1:7330178-7330197 | Msa0532790:three_prime_UTR | 25.0% |
| TGATTATTCATCTGAGAGTA+AGG | - | chr4_1:7326493-7326512 | None:intergenic | 30.0% | |
| TCTAACAGTGATATTCCATT+TGG | + | chr4_1:7326769-7326788 | Msa0532790:CDS | 30.0% | |
| TTGGGAATATAGTAATGTAG+AGG | + | chr4_1:7326888-7326907 | Msa0532790:CDS | 30.0% | |
| !!! | GTTTCGATGGATAGTTTTAT+TGG | + | chr4_1:7327198-7327217 | Msa0532790:CDS | 30.0% |
| GTTAGTATTGTCAATATGGA+TGG | + | chr4_1:7327454-7327473 | Msa0532790:intron | 30.0% | |
| !!! | ATGGATGGTTAATTTTGACT+TGG | + | chr4_1:7327469-7327488 | Msa0532790:intron | 30.0% |
| ! | TTTGGGTTATTTCAGGATAT+TGG | + | chr4_1:7327498-7327517 | Msa0532790:intron | 30.0% |
| ! | ATTTCAGGATATTGGCTAAT+AGG | + | chr4_1:7327506-7327525 | Msa0532790:intron | 30.0% |
| !!! | TGTGAATGCATGTTTTAGTT+TGG | + | chr4_1:7327666-7327685 | Msa0532790:intron | 30.0% |
| TAAGCCTTCATTTGATATTG+TGG | + | chr4_1:7327716-7327735 | Msa0532790:intron | 30.0% | |
| TTAACTTCAACTCACTATTC+TGG | - | chr4_1:7327843-7327862 | None:intergenic | 30.0% | |
| CTCTGCATACACAAAAAAAT+AGG | - | chr4_1:7327901-7327920 | None:intergenic | 30.0% | |
| GATTGAAAGAAATACCATCT+CGG | - | chr4_1:7327999-7328018 | None:intergenic | 30.0% | |
| CATTCATAATACAAGCAAGT+AGG | - | chr4_1:7328291-7328310 | None:intergenic | 30.0% | |
| CTACTTGCTTGTATTATGAA+TGG | + | chr4_1:7328289-7328308 | Msa0532790:intron | 30.0% | |
| ATTCCGTTATTTACCTCAAA+AGG | - | chr4_1:7328332-7328351 | None:intergenic | 30.0% | |
| ! | TTCATAGGAGTGTGTTAATT+AGG | + | chr4_1:7328504-7328523 | Msa0532790:intron | 30.0% |
| CGGAGAAAAACATAAAACAA+AGG | - | chr4_1:7328611-7328630 | None:intergenic | 30.0% | |
| !! | TGTAGCTTTTTCCAAAATCA+CGG | - | chr4_1:7329117-7329136 | None:intergenic | 30.0% |
| TTCATAGTCATCTTGATTGA+CGG | - | chr4_1:7329191-7329210 | None:intergenic | 30.0% | |
| !!! | TTTTTGGAAAAAAGCATCCT+GGG | + | chr4_1:7329335-7329354 | Msa0532790:intron | 30.0% |
| AATCTTCAGTCTTTGAACTT+CGG | - | chr4_1:7329621-7329640 | None:intergenic | 30.0% | |
| CTTTAACTCATTCTTTGAGT+TGG | - | chr4_1:7329798-7329817 | None:intergenic | 30.0% | |
| AATGAGTTAAAGCAATAGGT+TGG | + | chr4_1:7329806-7329825 | Msa0532790:exon | 30.0% | |
| ATGAGTTAAAGCAATAGGTT+GGG | + | chr4_1:7329807-7329826 | Msa0532790:exon | 30.0% | |
| ! | GAAGTATTCCTTAGTTGTTA+TGG | + | chr4_1:7329898-7329917 | Msa0532790:three_prime_UTR | 30.0% |
| TTAAATATAAGACGGGAATC+AGG | - | chr4_1:7329980-7329999 | None:intergenic | 30.0% | |
| ACAACGAAGGTTGAAAAGAA+AGG | - | chr4_1:7326195-7326214 | None:intergenic | 35.0% | |
| ACAGCAACAACATTGAAAAG+CGG | - | chr4_1:7326261-7326280 | None:intergenic | 35.0% | |
| TGATGCATTAAACTGTGGTA+TGG | - | chr4_1:7326380-7326399 | None:intergenic | 35.0% | |
| ! | TGTGATGATGCATTAAACTG+TGG | - | chr4_1:7326385-7326404 | None:intergenic | 35.0% |
| GTTAGTAGCAGAAATCAAAG+AGG | + | chr4_1:7326421-7326440 | Msa0532790:CDS | 35.0% | |
| ATCTGAGAGTAAGGTGAAAT+AGG | - | chr4_1:7326484-7326503 | None:intergenic | 35.0% | |
| TCAGATGAATAATCAGATCC+CGG | + | chr4_1:7326498-7326517 | Msa0532790:CDS | 35.0% | |
| AGTTGCTAAACCTAATTCGT+CGG | + | chr4_1:7326846-7326865 | Msa0532790:CDS | 35.0% | |
| TGGTGAAAAGGGAAACTAAT+TGG | + | chr4_1:7326869-7326888 | Msa0532790:CDS | 35.0% | |
| GGTGAAAAGGGAAACTAATT+GGG | + | chr4_1:7326870-7326889 | Msa0532790:CDS | 35.0% | |
| AGAGTAGTGTTAATGAGAGT+GGG | + | chr4_1:7327097-7327116 | Msa0532790:CDS | 35.0% | |
| !! | GAATTCAGTGGCTTTTAGTT+TGG | + | chr4_1:7327302-7327321 | Msa0532790:CDS | 35.0% |
| !!! | TGGCTTTTAGTTTGGAGTTT+GGG | + | chr4_1:7327310-7327329 | Msa0532790:CDS | 35.0% |
| !! | TTTAGTTTGGAGTTTGGGAA+TGG | + | chr4_1:7327315-7327334 | Msa0532790:CDS | 35.0% |
| GCCAGAGTTGAAGAAAATTA+TGG | + | chr4_1:7327350-7327369 | Msa0532790:CDS | 35.0% | |
| ! | GCCATAATTTTCTTCAACTC+TGG | - | chr4_1:7327354-7327373 | None:intergenic | 35.0% |
| !! | AAAACTTGCTGAGATTGCTA+TGG | + | chr4_1:7327380-7327399 | Msa0532790:CDS | 35.0% |
| GTTGAAGTTAACACAATTGC+AGG | + | chr4_1:7327852-7327871 | Msa0532790:intron | 35.0% | |
| TAATTTGGCATGCAGCAATT+TGG | + | chr4_1:7328148-7328167 | Msa0532790:intron | 35.0% | |
| AATTTGGCATGCAGCAATTT+GGG | + | chr4_1:7328149-7328168 | Msa0532790:intron | 35.0% | |
| GCTTGTATTATGAATGGAGT+TGG | + | chr4_1:7328295-7328314 | Msa0532790:intron | 35.0% | |
| !!! | GTGCAGTTTTTTTGGATACT+TGG | + | chr4_1:7328387-7328406 | Msa0532790:intron | 35.0% |
| !! | TACTGCTAAAGTTTGGTGTT+TGG | + | chr4_1:7328468-7328487 | Msa0532790:CDS | 35.0% |
| !! | AGGTGCATAACAGTTGTTTT+TGG | + | chr4_1:7328524-7328543 | Msa0532790:intron | 35.0% |
| !!! | GGTGCATAACAGTTGTTTTT+GGG | + | chr4_1:7328525-7328544 | Msa0532790:intron | 35.0% |
| !!! | GTGCATAACAGTTGTTTTTG+GGG | + | chr4_1:7328526-7328545 | Msa0532790:intron | 35.0% |
| GGTTGTCTTCTTTGAACTTT+AGG | + | chr4_1:7328557-7328576 | Msa0532790:intron | 35.0% | |
| ACACTTGGTCATACAAACTT+TGG | - | chr4_1:7328722-7328741 | None:intergenic | 35.0% | |
| AAAGTTTGTATGACCAAGTG+TGG | + | chr4_1:7328721-7328740 | Msa0532790:intron | 35.0% | |
| ATGAAACTTCTAACCACACT+TGG | - | chr4_1:7328737-7328756 | None:intergenic | 35.0% | |
| TTAAGTCCTCTGTTTAGCAT+TGG | + | chr4_1:7328806-7328825 | Msa0532790:intron | 35.0% | |
| ! | TCTGTTTAGCATTGGAAGAT+GGG | + | chr4_1:7328814-7328833 | Msa0532790:intron | 35.0% |
| TATGAAATGATCATGACAGC+CGG | + | chr4_1:7328917-7328936 | Msa0532790:intron | 35.0% | |
| ! | CAGGTAGCTTTTCTTTATGT+AGG | + | chr4_1:7329037-7329056 | Msa0532790:intron | 35.0% |
| !!! | CTATTTGGTTTTCCCTCAAA+TGG | + | chr4_1:7329233-7329252 | Msa0532790:intron | 35.0% |
| TATCGTCAGTTTCAGCAAAA+GGG | - | chr4_1:7329266-7329285 | None:intergenic | 35.0% | |
| ! | GTAAGAGTTACTACGGTTTT+TGG | + | chr4_1:7329319-7329338 | Msa0532790:intron | 35.0% |
| !!! | GTTTTTGGAAAAAAGCATCC+TGG | + | chr4_1:7329334-7329353 | Msa0532790:intron | 35.0% |
| TCATTCAGAGCTATTAGACA+AGG | - | chr4_1:7329587-7329606 | None:intergenic | 35.0% | |
| !! | TTGTCTAATAGCTCTGAATG+AGG | + | chr4_1:7329586-7329605 | Msa0532790:intron | 35.0% |
| AGTAGCAGAAATCAAAGAGG+AGG | + | chr4_1:7326424-7326443 | Msa0532790:CDS | 40.0% | |
| GAGAGTAAGGTGAAATAGGT+GGG | - | chr4_1:7326480-7326499 | None:intergenic | 40.0% | |
| TGAGAGTAAGGTGAAATAGG+TGG | - | chr4_1:7326481-7326500 | None:intergenic | 40.0% | |
| ATAATCAGATCCCGGTTTCA+CGG | + | chr4_1:7326506-7326525 | Msa0532790:CDS | 40.0% | |
| GAGTCGAGAGAGAAAAAAGA+CGG | - | chr4_1:7326592-7326611 | None:intergenic | 40.0% | |
| GAATATCACTGTTAGAACGC+CGG | - | chr4_1:7326765-7326784 | None:intergenic | 40.0% | |
| TAATTCGTCGGTGGTGAAAA+GGG | + | chr4_1:7326858-7326877 | Msa0532790:CDS | 40.0% | |
| TGGTGATAATCGCGATGATT+TGG | + | chr4_1:7327017-7327036 | Msa0532790:CDS | 40.0% | |
| GATTTGGATAGTAGAGCAAG+TGG | + | chr4_1:7327033-7327052 | Msa0532790:CDS | 40.0% | |
| GAGAGTAGTGTTAATGAGAG+TGG | + | chr4_1:7327096-7327115 | Msa0532790:CDS | 40.0% | |
| GAGTAGTGTTAATGAGAGTG+GGG | + | chr4_1:7327098-7327117 | Msa0532790:CDS | 40.0% | |
| !! | ACACTATAGGAGTGTTTCGA+TGG | + | chr4_1:7327185-7327204 | Msa0532790:CDS | 40.0% |
| !!! | GTGGCTTTTAGTTTGGAGTT+TGG | + | chr4_1:7327309-7327328 | Msa0532790:CDS | 40.0% |
| TTTGGGAATGGTGAGTTTAG+TGG | + | chr4_1:7327327-7327346 | Msa0532790:CDS | 40.0% | |
| TTGGGAATGGTGAGTTTAGT+GGG | + | chr4_1:7327328-7327347 | Msa0532790:CDS | 40.0% | |
| ! | AAGTTGTGCAGAAAGTGTAG+TGG | - | chr4_1:7327614-7327633 | None:intergenic | 40.0% |
| TGCACAACTTACTTTGTTGC+AGG | + | chr4_1:7327624-7327643 | Msa0532790:CDS | 40.0% | |
| ACAACTTACTTTGTTGCAGG+TGG | + | chr4_1:7327627-7327646 | Msa0532790:intron | 40.0% | |
| CAACTTACTTTGTTGCAGGT+GGG | + | chr4_1:7327628-7327647 | Msa0532790:intron | 40.0% | |
| ! | TGGCGCGTTTTGTAAAATTG+TGG | + | chr4_1:7327736-7327755 | Msa0532790:intron | 40.0% |
| ! | CGCGTTTTGTAAAATTGTGG+TGG | + | chr4_1:7327739-7327758 | Msa0532790:intron | 40.0% |
| TGTATGCAGAGAGATTCAGT+TGG | + | chr4_1:7327910-7327929 | Msa0532790:intron | 40.0% | |
| GGAACTTCAACTCACTATTC+TGG | - | chr4_1:7327945-7327964 | None:intergenic | 40.0% | |
| ATGTAAGAAGGGGGCTAATT+TGG | + | chr4_1:7328133-7328152 | Msa0532790:intron | 40.0% | |
| !!! | GGGCCTTTTGAGGTAAATAA+CGG | + | chr4_1:7328326-7328345 | Msa0532790:intron | 40.0% |
| !! | TAAAGTTTGGTGTTTGGCCA+AGG | + | chr4_1:7328474-7328493 | Msa0532790:CDS | 40.0% |
| AGGATAGCCATATCACTGTA+TGG | - | chr4_1:7328591-7328610 | None:intergenic | 40.0% | |
| AAGAATGTAGATCCCTGACA+TGG | + | chr4_1:7328694-7328713 | Msa0532790:intron | 40.0% | |
| CAAACTTTGGTACCATGTCA+GGG | - | chr4_1:7328709-7328728 | None:intergenic | 40.0% | |
| ACAAACTTTGGTACCATGTC+AGG | - | chr4_1:7328710-7328729 | None:intergenic | 40.0% | |
| CATCTTCCAATGCTAAACAG+AGG | - | chr4_1:7328815-7328834 | None:intergenic | 40.0% | |
| ! | CTCTGTTTAGCATTGGAAGA+TGG | + | chr4_1:7328813-7328832 | Msa0532790:intron | 40.0% |
| ATGAAATGATCATGACAGCC+GGG | + | chr4_1:7328918-7328937 | Msa0532790:intron | 40.0% | |
| ! | GTAATGGAATCAGTAAACCC+CGG | - | chr4_1:7328939-7328958 | None:intergenic | 40.0% |
| CATGTTCAAATTTCTTGGGG+AGG | + | chr4_1:7328995-7329014 | Msa0532790:intron | 40.0% | |
| CCTGACTCAAGATATTACCT+AGG | - | chr4_1:7329021-7329040 | None:intergenic | 40.0% | |
| CCTAGGTAATATCTTGAGTC+AGG | + | chr4_1:7329018-7329037 | Msa0532790:intron | 40.0% | |
| !! | TAGGTTACTTGGTGCATGTT+TGG | + | chr4_1:7329056-7329075 | Msa0532790:intron | 40.0% |
| GTTTGGATCAACAGTGAGAT+TGG | + | chr4_1:7329073-7329092 | Msa0532790:intron | 40.0% | |
| CAGTGAGATTGGCAGAATTA+CGG | + | chr4_1:7329084-7329103 | Msa0532790:intron | 40.0% | |
| AAGGGAAAACGTCCATTTGA+GGG | - | chr4_1:7329248-7329267 | None:intergenic | 40.0% | |
| AAAGGGAAAACGTCCATTTG+AGG | - | chr4_1:7329249-7329268 | None:intergenic | 40.0% | |
| GTATCGTCAGTTTCAGCAAA+AGG | - | chr4_1:7329267-7329286 | None:intergenic | 40.0% | |
| GAAAGTAGATGCTGAGTAGT+TGG | + | chr4_1:7329357-7329376 | Msa0532790:intron | 40.0% | |
| ATAGGGTTGACAGAATGTTG+CGG | - | chr4_1:7329692-7329711 | None:intergenic | 40.0% | |
| GCTGTTGTTGGAACATCATA+GGG | - | chr4_1:7329709-7329728 | None:intergenic | 40.0% | |
| TGCTGTTGTTGGAACATCAT+AGG | - | chr4_1:7329710-7329729 | None:intergenic | 40.0% | |
| ! | GTTAAAGCAATAGGTTGGGT+TGG | + | chr4_1:7329811-7329830 | Msa0532790:exon | 40.0% |
| GCTTACGACCATAACAACTA+AGG | - | chr4_1:7329909-7329928 | None:intergenic | 40.0% | |
| TTCACAATGCCTATCTAGCT+CGG | + | chr4_1:7329933-7329952 | Msa0532790:three_prime_UTR | 40.0% | |
| !!! | TTCAAACTGGTTTTGTCGTG+AGG | + | chr4_1:7330139-7330158 | Msa0532790:three_prime_UTR | 40.0% |
| !!! | TCAAACTGGTTTTGTCGTGA+GGG | + | chr4_1:7330140-7330159 | Msa0532790:three_prime_UTR | 40.0% |
| TGAGGGACTAATTGAAGCTA+AGG | + | chr4_1:7330157-7330176 | Msa0532790:three_prime_UTR | 40.0% | |
| GCAACAACATTGAAAAGCGG+CGG | - | chr4_1:7326258-7326277 | None:intergenic | 45.0% | |
| AGCAGAAATCAAAGAGGAGG+TGG | + | chr4_1:7326427-7326446 | Msa0532790:CDS | 45.0% | |
| AAATAGGTGGGATCTGGTGT+GGG | - | chr4_1:7326468-7326487 | None:intergenic | 45.0% | |
| AAGGTGAAATAGGTGGGATC+TGG | - | chr4_1:7326474-7326493 | None:intergenic | 45.0% | |
| GTAGGACTTGTACTATGCGA+CGG | - | chr4_1:7326541-7326560 | None:intergenic | 45.0% | |
| TTGAGAGAGTGATCGTGTGT+GGG | - | chr4_1:7326569-7326588 | None:intergenic | 45.0% | |
| AAGATTCGCGAAACGTGCAA+GGG | - | chr4_1:7326630-7326649 | None:intergenic | 45.0% | |
| !! | GAAGGGTTTCTAGCAGCAAA+CGG | - | chr4_1:7326721-7326740 | None:intergenic | 45.0% |
| TGCTAAACCTAATTCGTCGG+TGG | + | chr4_1:7326849-7326868 | Msa0532790:CDS | 45.0% | |
| ! | CTTTTCACCACCGACGAATT+AGG | - | chr4_1:7326859-7326878 | None:intergenic | 45.0% |
| CTAATTCGTCGGTGGTGAAA+AGG | + | chr4_1:7326857-7326876 | Msa0532790:CDS | 45.0% | |
| TCATCCACAACTTCACCTTC+CGG | - | chr4_1:7326931-7326950 | None:intergenic | 45.0% | |
| GATGATAAAAACGCGGCTAC+TGG | + | chr4_1:7326997-7327016 | Msa0532790:CDS | 45.0% | |
| GCAAGTGGAACGAAGACTAA+TGG | + | chr4_1:7327048-7327067 | Msa0532790:CDS | 45.0% | |
| AGTGGAACGAAGACTAATGG+TGG | + | chr4_1:7327051-7327070 | Msa0532790:CDS | 45.0% | |
| ATAGTATGCAGAGGAGGGAA+GGG | + | chr4_1:7327121-7327140 | Msa0532790:CDS | 45.0% | |
| ! | GAAGGGAATAAGAGAAGTGC+AGG | + | chr4_1:7327138-7327157 | Msa0532790:CDS | 45.0% |
| CTCCTATAGTGTCTCGTAGT+CGG | - | chr4_1:7327177-7327196 | None:intergenic | 45.0% | |
| GTTGATGTCGCCTGGTAATT+CGG | + | chr4_1:7327272-7327291 | Msa0532790:CDS | 45.0% | |
| TTGATGTCGCCTGGTAATTC+GGG | + | chr4_1:7327273-7327292 | Msa0532790:CDS | 45.0% | |
| ! | GTATCGCATTTTGCGCTCTT+TGG | - | chr4_1:7327548-7327567 | None:intergenic | 45.0% |
| CATTTCCGAGCTAGAACACA+AGG | + | chr4_1:7327567-7327586 | Msa0532790:CDS | 45.0% | |
| ! | CTGAACCTTGTGTTCTAGCT+CGG | - | chr4_1:7327575-7327594 | None:intergenic | 45.0% |
| CGCGCCACAATATCAAATGA+AGG | - | chr4_1:7327723-7327742 | None:intergenic | 45.0% | |
| ! | GTTGTTCCATGGATTGAAGG+CGG | - | chr4_1:7327966-7327985 | None:intergenic | 45.0% |
| ! | CCTGTTGTTCCATGGATTGA+AGG | - | chr4_1:7327969-7327988 | None:intergenic | 45.0% |
| CCTTCAATCCATGGAACAAC+AGG | + | chr4_1:7327966-7327985 | Msa0532790:CDS | 45.0% | |
| ! | GAGTTTTGCCTGTTGTTCCA+TGG | - | chr4_1:7327977-7327996 | None:intergenic | 45.0% |
| !! | CGAGATAGTGGACGAAATCA+AGG | + | chr4_1:7328227-7328246 | Msa0532790:intron | 45.0% |
| ! | ACGAAATCAAGGTGCTAGCT+TGG | + | chr4_1:7328238-7328257 | Msa0532790:intron | 45.0% |
| CTTGGAGATGGAGTTTGGTT+AGG | + | chr4_1:7328256-7328275 | Msa0532790:intron | 45.0% | |
| ATGAATGGAGTTGGAATCCG+AGG | + | chr4_1:7328304-7328323 | Msa0532790:intron | 45.0% | |
| TGAATGGAGTTGGAATCCGA+GGG | + | chr4_1:7328305-7328324 | Msa0532790:intron | 45.0% | |
| ATTTACCTCAAAAGGCCCCT+CGG | - | chr4_1:7328324-7328343 | None:intergenic | 45.0% | |
| ! | ATAACGGAATCTAGAGCAGC+AGG | + | chr4_1:7328342-7328361 | Msa0532790:intron | 45.0% |
| AGCAGGAAGGCTCTCTAATT+GGG | + | chr4_1:7328359-7328378 | Msa0532790:intron | 45.0% | |
| !!! | GTTGTTTTTGGGGAGTCTCT+TGG | + | chr4_1:7328536-7328555 | Msa0532790:intron | 45.0% |
| GCTGCTACCATACAGTGATA+TGG | + | chr4_1:7328581-7328600 | Msa0532790:intron | 45.0% | |
| CAACCCACACAAGACGTAAT+AGG | - | chr4_1:7328634-7328653 | None:intergenic | 45.0% | |
| !! | AGCATTGGAAGATGGGTTGT+AGG | + | chr4_1:7328821-7328840 | Msa0532790:intron | 45.0% |
| TGAAATGATCATGACAGCCG+GGG | + | chr4_1:7328919-7328938 | Msa0532790:intron | 45.0% | |
| ! | ACGGTAGTCTACCGTGATTT+TGG | + | chr4_1:7329103-7329122 | Msa0532790:intron | 45.0% |
| ATCTTGATTGACGGTGAGTC+CGG | - | chr4_1:7329182-7329201 | None:intergenic | 45.0% | |
| TACTCAGCATCTACTTTCCC+AGG | - | chr4_1:7329355-7329374 | None:intergenic | 45.0% | |
| ATTGCTACAGCTGAGCTGAA+TGG | + | chr4_1:7329638-7329657 | Msa0532790:CDS | 45.0% | |
| TTGCTACAGCTGAGCTGAAT+GGG | + | chr4_1:7329639-7329658 | Msa0532790:CDS | 45.0% | |
| TGCGGAATCATGCAGTTAGA+AGG | - | chr4_1:7329674-7329693 | None:intergenic | 45.0% | |
| CATCAACAACAGCAGCAGAA+TGG | + | chr4_1:7329767-7329786 | Msa0532790:CDS | 45.0% | |
| !! | AAAGCAATAGGTTGGGTTGG+AGG | + | chr4_1:7329814-7329833 | Msa0532790:exon | 45.0% |
| ACTTTGTGACCGAGCTAGAT+AGG | - | chr4_1:7329945-7329964 | None:intergenic | 45.0% | |
| CGCTACTGTGAAGACAACGA+AGG | - | chr4_1:7326208-7326227 | None:intergenic | 50.0% | |
| GAAATAGGTGGGATCTGGTG+TGG | - | chr4_1:7326469-7326488 | None:intergenic | 50.0% | |
| GTACTATGCGACGGCATTTG+CGG | - | chr4_1:7326532-7326551 | None:intergenic | 50.0% | |
| GTTGAGAGAGTGATCGTGTG+TGG | - | chr4_1:7326570-7326589 | None:intergenic | 50.0% | |
| GAAGATTCGCGAAACGTGCA+AGG | - | chr4_1:7326631-7326650 | None:intergenic | 50.0% | |
| GGATCATGCTGACGTTTCCA+TGG | + | chr4_1:7326660-7326679 | Msa0532790:CDS | 50.0% | |
| AGTGACGTCACGATCTTCCA+TGG | - | chr4_1:7326680-7326699 | None:intergenic | 50.0% | |
| CTAGCAGCAAACGGAGGTAA+CGG | - | chr4_1:7326712-7326731 | None:intergenic | 50.0% | |
| ! | ATTTTCTCGGCGGCAGAGAA+GGG | - | chr4_1:7326738-7326757 | None:intergenic | 50.0% |
| ! | GAACGCCGGTGAGATTTTCT+CGG | - | chr4_1:7326751-7326770 | None:intergenic | 50.0% |
| CTTCCTCGAAGCGGAATCAA+CGG | - | chr4_1:7326823-7326842 | None:intergenic | 50.0% | |
| ! | GTTGATTCCGCTTCGAGGAA+GGG | + | chr4_1:7326822-7326841 | Msa0532790:CDS | 50.0% |
| GGAGAAGAAATCGTTGTCGC+CGG | + | chr4_1:7326909-7326928 | Msa0532790:CDS | 50.0% | |
| AAGAAATCGTTGTCGCCGGA+AGG | + | chr4_1:7326913-7326932 | Msa0532790:CDS | 50.0% | |
| AGAGTGGGGATAGTATGCAG+AGG | + | chr4_1:7327112-7327131 | Msa0532790:CDS | 50.0% | |
| TGGGGATAGTATGCAGAGGA+GGG | + | chr4_1:7327116-7327135 | Msa0532790:CDS | 50.0% | |
| GATAGTATGCAGAGGAGGGA+AGG | + | chr4_1:7327120-7327139 | Msa0532790:CDS | 50.0% | |
| ! | GGGAATAAGAGAAGTGCAGG+AGG | + | chr4_1:7327141-7327160 | Msa0532790:CDS | 50.0% |
| ! | CACCGACTACGAGACACTAT+AGG | + | chr4_1:7327172-7327191 | Msa0532790:CDS | 50.0% |
| TTCCCATCACCCGAATTACC+AGG | - | chr4_1:7327285-7327304 | None:intergenic | 50.0% | |
| !! | TTCGGGTGATGGGAATTCAG+TGG | + | chr4_1:7327290-7327309 | Msa0532790:CDS | 50.0% |
| TTGCTATGGCTGATCCGAAG+CGG | + | chr4_1:7327394-7327413 | Msa0532790:CDS | 50.0% | |
| GAAGTTCCGCCTTCAATCCA+TGG | + | chr4_1:7327957-7327976 | Msa0532790:CDS | 50.0% | |
| CAACAGGCAAAACTCCGAGA+TGG | + | chr4_1:7327982-7328001 | Msa0532790:CDS | 50.0% | |
| GAGGGATGTAGACGAGATAG+TGG | + | chr4_1:7328215-7328234 | Msa0532790:intron | 50.0% | |
| ! | TCAAGGTGCTAGCTTGGAGA+TGG | + | chr4_1:7328244-7328263 | Msa0532790:intron | 50.0% |
| ! | GCTAGCTTGGAGATGGAGTT+TGG | + | chr4_1:7328251-7328270 | Msa0532790:intron | 50.0% |
| GAATGGAGTTGGAATCCGAG+GGG | + | chr4_1:7328306-7328325 | Msa0532790:intron | 50.0% | |
| CAGCAGGAAGGCTCTCTAAT+TGG | + | chr4_1:7328358-7328377 | Msa0532790:intron | 50.0% | |
| AAGGCTCTCTAATTGGGTCG+CGG | + | chr4_1:7328365-7328384 | Msa0532790:intron | 50.0% | |
| ! | TGTGTTTGCTGCTGCCAGTA+GGG | + | chr4_1:7328423-7328442 | Msa0532790:CDS | 50.0% |
| !! | AGTTTGGTGTTTGGCCAAGG+CGG | + | chr4_1:7328477-7328496 | Msa0532790:CDS | 50.0% |
| TCCGCCTATTACGTCTTGTG+TGG | + | chr4_1:7328627-7328646 | Msa0532790:intron | 50.0% | |
| CCCACACAAGACGTAATAGG+CGG | - | chr4_1:7328631-7328650 | None:intergenic | 50.0% | |
| CCGCCTATTACGTCTTGTGT+GGG | + | chr4_1:7328628-7328647 | Msa0532790:intron | 50.0% | |
| CAAATTTCTTGGGGAGGCCT+AGG | + | chr4_1:7329001-7329020 | Msa0532790:intron | 50.0% | |
| !! | GTGCTGCCATGATTTGTTGC+CGG | + | chr4_1:7329160-7329179 | Msa0532790:intron | 50.0% |
| GTGAGTCCGGCAACAAATCA+TGG | - | chr4_1:7329169-7329188 | None:intergenic | 50.0% | |
| TGCTACAGCTGAGCTGAATG+GGG | + | chr4_1:7329640-7329659 | Msa0532790:CDS | 50.0% | |
| GCTGATGCTGATGCTGTTGT+TGG | - | chr4_1:7329721-7329740 | None:intergenic | 50.0% | |
| GAGATAAGCGCCTGCTCCTT+CGG | + | chr4_1:7326227-7326246 | Msa0532790:five_prime_UTR | 55.0% | |
| AAAAGCGGCGGAAATGCCGA+AGG | - | chr4_1:7326246-7326265 | None:intergenic | 55.0% | |
| ATCTGGTGTGGGTGTGATGG+TGG | - | chr4_1:7326457-7326476 | None:intergenic | 55.0% | |
| ! | GATCGTGTGTGGGAAGGTGT+AGG | - | chr4_1:7326559-7326578 | None:intergenic | 55.0% |
| GAGAGTGATCGTGTGTGGGA+AGG | - | chr4_1:7326565-7326584 | None:intergenic | 55.0% | |
| TCGCGAATCTTCCTCCACGT+CGG | + | chr4_1:7326639-7326658 | Msa0532790:CDS | 55.0% | |
| AACGTCAGCATGATCCGACG+TGG | - | chr4_1:7326656-7326675 | None:intergenic | 55.0% | |
| !! | GGGTTTCTAGCAGCAAACGG+AGG | - | chr4_1:7326718-7326737 | None:intergenic | 55.0% |
| ! | GATTTTCTCGGCGGCAGAGA+AGG | - | chr4_1:7326739-7326758 | None:intergenic | 55.0% |
| TGCCGCCGAGAAAATCTCAC+CGG | + | chr4_1:7326743-7326762 | Msa0532790:CDS | 55.0% | |
| !! | CGTTGATTCCGCTTCGAGGA+AGG | + | chr4_1:7326821-7326840 | Msa0532790:CDS | 55.0% |
| GCAACTTCCCTTCCTCGAAG+CGG | - | chr4_1:7326832-7326851 | None:intergenic | 55.0% | |
| GTGGGGATAGTATGCAGAGG+AGG | + | chr4_1:7327115-7327134 | Msa0532790:CDS | 55.0% | |
| TCGCCTGGTAATTCGGGTGA+TGG | + | chr4_1:7327279-7327298 | Msa0532790:CDS | 55.0% | |
| CGCCTGGTAATTCGGGTGAT+GGG | + | chr4_1:7327280-7327299 | Msa0532790:CDS | 55.0% | |
| TGCTATGGCTGATCCGAAGC+GGG | + | chr4_1:7327395-7327414 | Msa0532790:CDS | 55.0% | |
| ! | CGGAATCTAGAGCAGCAGGA+AGG | + | chr4_1:7328346-7328365 | Msa0532790:intron | 55.0% |
| !!! | GGGTCGCGGTGCAGTTTTTT+TGG | + | chr4_1:7328379-7328398 | Msa0532790:intron | 55.0% |
| ! | CTGTGTTTGCTGCTGCCAGT+AGG | + | chr4_1:7328422-7328441 | Msa0532790:CDS | 55.0% |
| ! | GTGTTTGCTGCTGCCAGTAG+GGG | + | chr4_1:7328424-7328443 | Msa0532790:CDS | 55.0% |
| CTCCTATGAACCTACCGCCT+TGG | - | chr4_1:7328494-7328513 | None:intergenic | 55.0% | |
| ! | TGGGTTGGAGGTTGTGCAGA+CGG | + | chr4_1:7329826-7329845 | Msa0532790:three_prime_UTR | 55.0% |
| GGGATCTGGTGTGGGTGTGA+TGG | - | chr4_1:7326460-7326479 | None:intergenic | 60.0% | |
| GCATTTGCGGCCGTGAAACC+GGG | - | chr4_1:7326519-7326538 | None:intergenic | 60.0% | |
| GGCATTTGCGGCCGTGAAAC+CGG | - | chr4_1:7326520-7326539 | None:intergenic | 60.0% | |
| AACGTGCAAGGGCTGAGAGG+CGG | - | chr4_1:7326619-7326638 | None:intergenic | 60.0% | |
| CGAAACGTGCAAGGGCTGAG+AGG | - | chr4_1:7326622-7326641 | None:intergenic | 60.0% | |
| GTCAGCATGATCCGACGTGG+AGG | - | chr4_1:7326653-7326672 | None:intergenic | 60.0% | |
| ! | CGCCGGTGAGATTTTCTCGG+CGG | - | chr4_1:7326748-7326767 | None:intergenic | 60.0% |
| CCTCGAAGCGGAATCAACGG+CGG | - | chr4_1:7326820-7326839 | None:intergenic | 60.0% | |
| GTCGCCGGAAGGTGAAGTTG+TGG | + | chr4_1:7326924-7326943 | Msa0532790:CDS | 60.0% | |
| TTGAAGATGCCGCCTTCGCC+TGG | + | chr4_1:7327246-7327265 | Msa0532790:CDS | 60.0% | |
| ATCAACCCTCCAGGCGAAGG+CGG | - | chr4_1:7327258-7327277 | None:intergenic | 60.0% | |
| GACATCAACCCTCCAGGCGA+AGG | - | chr4_1:7327261-7327280 | None:intergenic | 60.0% | |
| !! | CTGATCCGAAGCGGGCTAAG+AGG | + | chr4_1:7327403-7327422 | Msa0532790:CDS | 60.0% |
| CAGCACCTCTTAGCCCGCTT+CGG | - | chr4_1:7327411-7327430 | None:intergenic | 60.0% | |
| ! | GGAATCCGAGGGGCCTTTTG+AGG | + | chr4_1:7328316-7328335 | Msa0532790:intron | 60.0% |
| TGGTGTTTGGCCAAGGCGGT+AGG | + | chr4_1:7328481-7328500 | Msa0532790:CDS | 60.0% | |
| GGCCAAGGCGGTAGGTTCAT+AGG | + | chr4_1:7328489-7328508 | Msa0532790:intron | 60.0% | |
| GGCGGAAATGCCGAAGGAGC+AGG | - | chr4_1:7326240-7326259 | None:intergenic | 65.0% | |
| !! | CCGCCGTTGATTCCGCTTCG+AGG | + | chr4_1:7326817-7326836 | Msa0532790:CDS | 65.0% |
| AAGATGCCGCCTTCGCCTGG+AGG | + | chr4_1:7327249-7327268 | Msa0532790:CDS | 65.0% | |
| AGATGCCGCCTTCGCCTGGA+GGG | + | chr4_1:7327250-7327269 | Msa0532790:CDS | 65.0% | |
| CCAGGCGACATCAACCCTCC+AGG | - | chr4_1:7327267-7327286 | None:intergenic | 65.0% | |
| !! | CCTGGAGGGTTGATGTCGCC+TGG | + | chr4_1:7327264-7327283 | Msa0532790:CDS | 65.0% |
| CCAGCACAGACAGCCCCTAC+TGG | - | chr4_1:7328440-7328459 | None:intergenic | 65.0% | |
| CCAGTAGGGGCTGTCTGTGC+TGG | + | chr4_1:7328437-7328456 | Msa0532790:CDS | 65.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr4_1 | gene | 7326081 | 7330203 | 7326081 | ID=Msa0532790;Name=Msa0532790 |
| chr4_1 | mRNA | 7326081 | 7330203 | 7326081 | ID=Msa0532790-mRNA-1;Parent=Msa0532790;Name=Msa0532790-mRNA-1;_AED=0.03;_eAED=0.03;_QI=223|0.5|0.8|0.8|1|1|5|380|551 |
| chr4_1 | exon | 7326081 | 7327424 | 7326081 | ID=Msa0532790-mRNA-1:exon:2512;Parent=Msa0532790-mRNA-1 |
| chr4_1 | exon | 7327513 | 7327645 | 7327513 | ID=Msa0532790-mRNA-1:exon:2513;Parent=Msa0532790-mRNA-1 |
| chr4_1 | exon | 7327919 | 7328003 | 7327919 | ID=Msa0532790-mRNA-1:exon:2514;Parent=Msa0532790-mRNA-1 |
| chr4_1 | exon | 7328413 | 7328502 | 7328413 | ID=Msa0532790-mRNA-1:exon:2515;Parent=Msa0532790-mRNA-1 |
| chr4_1 | exon | 7329597 | 7330203 | 7329597 | ID=Msa0532790-mRNA-1:exon:2516;Parent=Msa0532790-mRNA-1 |
| chr4_1 | five_prime_UTR | 7326081 | 7326303 | 7326081 | ID=Msa0532790-mRNA-1:five_prime_utr;Parent=Msa0532790-mRNA-1 |
| chr4_1 | CDS | 7326304 | 7327424 | 7326304 | ID=Msa0532790-mRNA-1:cds;Parent=Msa0532790-mRNA-1 |
| chr4_1 | CDS | 7327513 | 7327645 | 7327513 | ID=Msa0532790-mRNA-1:cds;Parent=Msa0532790-mRNA-1 |
| chr4_1 | CDS | 7327919 | 7328003 | 7327919 | ID=Msa0532790-mRNA-1:cds;Parent=Msa0532790-mRNA-1 |
| chr4_1 | CDS | 7328413 | 7328502 | 7328413 | ID=Msa0532790-mRNA-1:cds;Parent=Msa0532790-mRNA-1 |
| chr4_1 | CDS | 7329597 | 7329823 | 7329597 | ID=Msa0532790-mRNA-1:cds;Parent=Msa0532790-mRNA-1 |
| chr4_1 | three_prime_UTR | 7329824 | 7330203 | 7329824 | ID=Msa0532790-mRNA-1:three_prime_utr;Parent=Msa0532790-mRNA-1 |
| Gene Sequence |
| Protein sequence |
