Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1074530 | XP_003625149.1 | 95.341 | 279 | 13 | 0 | 1 | 279 | 1 | 279 | 7.61e-165 | 468 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1074530 | sp|P93758|RMR42_ARATH | 53.901 | 282 | 96 | 7 | 9 | 279 | 13 | 271 | 1.46e-86 | 262 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1074530 | A2Q3K8 | 95.341 | 279 | 13 | 0 | 1 | 279 | 1 | 279 | 3.64e-165 | 468 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0015390 | Msa1074530 | 0.805171 | 1.518490e-49 | -8.615850e-47 |
| Msa0029850 | Msa1074530 | 0.816345 | 5.802248e-52 | -8.615850e-47 |
| Msa0039330 | Msa1074530 | 0.820103 | 8.185652e-53 | -8.615850e-47 |
| Msa0050930 | Msa1074530 | 0.800308 | 1.531744e-48 | -8.615850e-47 |
| Msa0051460 | Msa1074530 | 0.812032 | 5.198043e-51 | -8.615850e-47 |
| Msa0089360 | Msa1074530 | 0.806701 | 7.238738e-50 | -8.615850e-47 |
| Msa0095560 | Msa1074530 | 0.806097 | 9.707699e-50 | -8.615850e-47 |
| Msa0096450 | Msa1074530 | 0.836257 | 1.040489e-56 | -8.615850e-47 |
| Msa0102120 | Msa1074530 | 0.821114 | 4.796856e-53 | -8.615850e-47 |
| Msa0104800 | Msa1074530 | 0.801271 | 9.743863e-49 | -8.615850e-47 |
| Msa0120020 | Msa1074530 | -0.800180 | 1.626773e-48 | -8.615850e-47 |
| Msa0607540 | Msa1074530 | 0.857010 | 2.182982e-62 | -8.615850e-47 |
| Msa0627350 | Msa1074530 | 0.806584 | 7.663113e-50 | -8.615850e-47 |
| Msa0635380 | Msa1074530 | 0.824700 | 7.002820e-54 | -8.615850e-47 |
| Msa0640380 | Msa1074530 | 0.824155 | 9.408860e-54 | -8.615850e-47 |
| Msa0647830 | Msa1074530 | 0.866250 | 3.271400e-65 | -8.615850e-47 |
| Msa0653490 | Msa1074530 | 0.801526 | 8.637572e-49 | -8.615850e-47 |
| Msa0654010 | Msa1074530 | 0.808433 | 3.104898e-50 | -8.615850e-47 |
| Msa0658570 | Msa1074530 | 0.807818 | 4.197115e-50 | -8.615850e-47 |
| Msa0659540 | Msa1074530 | 0.805468 | 1.315855e-49 | -8.615850e-47 |
| Msa0662570 | Msa1074530 | 0.800682 | 1.285156e-48 | -8.615850e-47 |
| Msa0662650 | Msa1074530 | 0.805375 | 1.376187e-49 | -8.615850e-47 |
| Msa0670660 | Msa1074530 | 0.810221 | 1.283703e-50 | -8.615850e-47 |
| Msa0678820 | Msa1074530 | 0.842380 | 2.679572e-58 | -8.615850e-47 |
| Msa0688070 | Msa1074530 | 0.813259 | 2.802069e-51 | -8.615850e-47 |
| Msa0690440 | Msa1074530 | 0.853212 | 2.774441e-61 | -8.615850e-47 |
| Msa0692230 | Msa1074530 | 0.816321 | 5.874106e-52 | -8.615850e-47 |
| Msa0693380 | Msa1074530 | 0.817886 | 2.613434e-52 | -8.615850e-47 |
| Msa0698360 | Msa1074530 | 0.812330 | 4.476527e-51 | -8.615850e-47 |
| Msa0708860 | Msa1074530 | 0.813182 | 2.913023e-51 | -8.615850e-47 |
| Msa0717020 | Msa1074530 | 0.802903 | 4.497693e-49 | -8.615850e-47 |
| Msa0724000 | Msa1074530 | 0.800400 | 1.467120e-48 | -8.615850e-47 |
| Msa0731180 | Msa1074530 | 0.802495 | 5.459316e-49 | -8.615850e-47 |
| Msa0744170 | Msa1074530 | -0.819900 | 9.108548e-53 | -8.615850e-47 |
| Msa0751210 | Msa1074530 | 0.814031 | 1.894805e-51 | -8.615850e-47 |
| Msa0764570 | Msa1074530 | 0.800421 | 1.452462e-48 | -8.615850e-47 |
| Msa0766630 | Msa1074530 | 0.816237 | 6.132043e-52 | -8.615850e-47 |
| Msa0767080 | Msa1074530 | 0.833102 | 6.468532e-56 | -8.615850e-47 |
| Msa0785570 | Msa1074530 | 0.838941 | 2.131398e-57 | -8.615850e-47 |
| Msa0790680 | Msa1074530 | 0.821605 | 3.693447e-53 | -8.615850e-47 |
| Msa0795080 | Msa1074530 | 0.802540 | 5.345987e-49 | -8.615850e-47 |
| Msa0798860 | Msa1074530 | 0.800962 | 1.126883e-48 | -8.615850e-47 |
| Msa0799370 | Msa1074530 | 0.836021 | 1.194204e-56 | -8.615850e-47 |
| Msa0806090 | Msa1074530 | 0.825095 | 5.650347e-54 | -8.615850e-47 |
| Msa0806200 | Msa1074530 | 0.839146 | 1.886307e-57 | -8.615850e-47 |
| Msa0818110 | Msa1074530 | 0.827056 | 1.931473e-54 | -8.615850e-47 |
| Msa0827350 | Msa1074530 | -0.803654 | 3.143706e-49 | -8.615850e-47 |
| Msa0831590 | Msa1074530 | 0.836024 | 1.192447e-56 | -8.615850e-47 |
| Msa0151180 | Msa1074530 | 0.814856 | 1.245145e-51 | -8.615850e-47 |
| Msa0169820 | Msa1074530 | 0.824428 | 8.115719e-54 | -8.615850e-47 |
| Msa0170140 | Msa1074530 | 0.810108 | 1.357993e-50 | -8.615850e-47 |
| Msa0178930 | Msa1074530 | 0.823938 | 1.058006e-53 | -8.615850e-47 |
| Msa0187060 | Msa1074530 | 0.816410 | 5.609729e-52 | -8.615850e-47 |
| Msa0188830 | Msa1074530 | 0.804332 | 2.272837e-49 | -8.615850e-47 |
| Msa0199800 | Msa1074530 | -0.808799 | 2.592846e-50 | -8.615850e-47 |
| Msa0205510 | Msa1074530 | 0.803894 | 2.803460e-49 | -8.615850e-47 |
| Msa0206010 | Msa1074530 | 0.809094 | 2.242371e-50 | -8.615850e-47 |
| Msa0210450 | Msa1074530 | 0.854559 | 1.135766e-61 | -8.615850e-47 |
| Msa0217400 | Msa1074530 | 0.801221 | 9.971788e-49 | -8.615850e-47 |
| Msa0223410 | Msa1074530 | -0.810900 | 9.157873e-51 | -8.615850e-47 |
| Msa0233300 | Msa1074530 | 0.801030 | 1.091375e-48 | -8.615850e-47 |
| Msa0234430 | Msa1074530 | 0.822881 | 1.868087e-53 | -8.615850e-47 |
| Msa0365490 | Msa1074530 | 0.818429 | 1.969613e-52 | -8.615850e-47 |
| Msa0373930 | Msa1074530 | 0.808673 | 2.758646e-50 | -8.615850e-47 |
| Msa0376590 | Msa1074530 | 0.828547 | 8.459414e-55 | -8.615850e-47 |
| Msa0379640 | Msa1074530 | 0.854902 | 9.033829e-62 | -8.615850e-47 |
| Msa0381600 | Msa1074530 | -0.802457 | 5.560542e-49 | -8.615850e-47 |
| Msa0381620 | Msa1074530 | -0.802448 | 5.583852e-49 | -8.615850e-47 |
| Msa0389320 | Msa1074530 | 0.814542 | 1.460873e-51 | -8.615850e-47 |
| Msa0389340 | Msa1074530 | 0.817714 | 2.858036e-52 | -8.615850e-47 |
| Msa0389810 | Msa1074530 | 0.820057 | 8.384651e-53 | -8.615850e-47 |
| Msa0409200 | Msa1074530 | 0.811660 | 6.266214e-51 | -8.615850e-47 |
| Msa0412840 | Msa1074530 | 0.819074 | 1.405688e-52 | -8.615850e-47 |
| Msa0426900 | Msa1074530 | 0.802864 | 4.583356e-49 | -8.615850e-47 |
| Msa0431690 | Msa1074530 | 0.809136 | 2.196345e-50 | -8.615850e-47 |
| Msa0433410 | Msa1074530 | -0.813667 | 2.279132e-51 | -8.615850e-47 |
| Msa0438050 | Msa1074530 | 0.826748 | 2.288276e-54 | -8.615850e-47 |
| Msa0442200 | Msa1074530 | 0.836196 | 1.078020e-56 | -8.615850e-47 |
| Msa0444750 | Msa1074530 | -0.828111 | 1.078230e-54 | -8.615850e-47 |
| Msa0453350 | Msa1074530 | 0.800370 | 1.488064e-48 | -8.615850e-47 |
| Msa0458440 | Msa1074530 | 0.822944 | 1.806749e-53 | -8.615850e-47 |
| Msa0466390 | Msa1074530 | 0.820634 | 6.182531e-53 | -8.615850e-47 |
| Msa0468130 | Msa1074530 | 0.815154 | 1.069272e-51 | -8.615850e-47 |
| Msa0469940 | Msa1074530 | -0.802280 | 6.045533e-49 | -8.615850e-47 |
| Msa0475490 | Msa1074530 | 0.843232 | 1.590630e-58 | -8.615850e-47 |
| Msa0477130 | Msa1074530 | -0.837211 | 5.940639e-57 | -8.615850e-47 |
| Msa0479970 | Msa1074530 | 0.811712 | 6.102384e-51 | -8.615850e-47 |
| Msa0982270 | Msa1074530 | 0.828592 | 8.254399e-55 | -8.615850e-47 |
| Msa0993290 | Msa1074530 | 0.802776 | 4.777856e-49 | -8.615850e-47 |
| Msa1002480 | Msa1074530 | 0.803438 | 3.486227e-49 | -8.615850e-47 |
| Msa1015790 | Msa1074530 | 0.803885 | 2.816176e-49 | -8.615850e-47 |
| Msa1034150 | Msa1074530 | 0.834376 | 3.105914e-56 | -8.615850e-47 |
| Msa1034710 | Msa1074530 | 0.910466 | 1.814548e-82 | -8.615850e-47 |
| Msa1044420 | Msa1074530 | 0.802917 | 4.469263e-49 | -8.615850e-47 |
| Msa1054410 | Msa1074530 | 0.808792 | 2.602510e-50 | -8.615850e-47 |
| Msa1059570 | Msa1074530 | 0.804541 | 2.056230e-49 | -8.615850e-47 |
| Msa1068200 | Msa1074530 | -0.822823 | 1.927043e-53 | -8.615850e-47 |
| Msa1074530 | Msa1075080 | -0.839608 | 1.431139e-57 | -8.615850e-47 |
| Msa1074530 | Msa1075220 | -0.863537 | 2.320197e-64 | -8.615850e-47 |
| Msa1074530 | Msa1082500 | 0.824481 | 7.887208e-54 | -8.615850e-47 |
| Msa1074530 | Msa1084260 | 0.821135 | 4.741496e-53 | -8.615850e-47 |
| Msa1074530 | Msa1090260 | 0.821424 | 4.068250e-53 | -8.615850e-47 |
| Msa1074530 | Msa1092090 | 0.831343 | 1.761817e-55 | -8.615850e-47 |
| Msa1074530 | Msa1105450 | 0.804193 | 2.428937e-49 | -8.615850e-47 |
| Msa1074530 | Msa1115020 | 0.868859 | 4.772706e-66 | -8.615850e-47 |
| Msa1074530 | Msa1116130 | -0.843344 | 1.484801e-58 | -8.615850e-47 |
| Msa1074530 | Msa1131940 | -0.801338 | 9.437427e-49 | -8.615850e-47 |
| Msa1074530 | Msa1139000 | -0.847150 | 1.387421e-59 | -8.615850e-47 |
| Msa1074530 | Msa1143270 | 0.817875 | 2.628158e-52 | -8.615850e-47 |
| Msa1074530 | Msa1156340 | -0.813564 | 2.401566e-51 | -8.615850e-47 |
| Msa1074530 | Msa1158670 | 0.822518 | 2.269947e-53 | -8.615850e-47 |
| Msa1074530 | Msa1162550 | -0.858966 | 5.729445e-63 | -8.615850e-47 |
| Msa1074530 | Msa1163590 | -0.832740 | 7.953874e-56 | -8.615850e-47 |
| Msa1074530 | Msa1174040 | 0.805455 | 1.323673e-49 | -8.615850e-47 |
| Msa1074530 | Msa1186950 | -0.816148 | 6.419844e-52 | -8.615850e-47 |
| Msa1074530 | Msa1198770 | 0.807270 | 5.486010e-50 | -8.615850e-47 |
| Msa1074530 | Msa1207380 | 0.803035 | 4.224906e-49 | -8.615850e-47 |
| Msa1074530 | Msa1224480 | 0.813574 | 2.389340e-51 | -8.615850e-47 |
| Msa1074530 | Msa1230830 | 0.843424 | 1.413032e-58 | -8.615850e-47 |
| Msa1074530 | Msa1235400 | 0.813340 | 2.690146e-51 | -8.615850e-47 |
| Msa1074530 | Msa1239720 | 0.804398 | 2.202536e-49 | -8.615850e-47 |
| Msa1074530 | Msa1246500 | 0.806274 | 8.905733e-50 | -8.615850e-47 |
| Msa1074530 | Msa1250890 | 0.803979 | 2.691463e-49 | -8.615850e-47 |
| Msa1074530 | Msa1255060 | 0.825014 | 5.906027e-54 | -8.615850e-47 |
| Msa1074530 | Msa1267600 | 0.809205 | 2.123052e-50 | -8.615850e-47 |
| Msa1074530 | Msa1270730 | 0.801351 | 9.380746e-49 | -8.615850e-47 |
| Msa1074530 | Msa1276440 | 0.801000 | 1.106843e-48 | -8.615850e-47 |
| Msa1074530 | Msa1278840 | 0.812529 | 4.050614e-51 | -8.615850e-47 |
| Msa1074530 | Msa1279210 | 0.850443 | 1.692276e-60 | -8.615850e-47 |
| Msa1074530 | Msa1295510 | 0.833900 | 4.087771e-56 | -8.615850e-47 |
| Msa1074530 | Msa1305340 | 0.801542 | 8.571226e-49 | -8.615850e-47 |
| Msa1074530 | Msa1307740 | 0.821401 | 4.117891e-53 | -8.615850e-47 |
| Msa1074530 | Msa1314770 | 0.807571 | 4.735769e-50 | -8.615850e-47 |
| Msa1074530 | Msa1318990 | 0.818704 | 1.706201e-52 | -8.615850e-47 |
| Msa1074530 | Msa1322190 | 0.824440 | 8.064136e-54 | -8.615850e-47 |
| Msa1074530 | Msa1327050 | 0.800393 | 1.472196e-48 | -8.615850e-47 |
| Msa1074530 | Msa1327680 | 0.814255 | 1.690943e-51 | -8.615850e-47 |
| Msa1074530 | Msa1329700 | 0.800179 | 1.627357e-48 | -8.615850e-47 |
| Msa1074530 | Msa1340650 | 0.827038 | 1.951107e-54 | -8.615850e-47 |
| Msa1074530 | Msa1341570 | 0.806357 | 8.554746e-50 | -8.615850e-47 |
| Msa1074530 | Msa1344130 | 0.812638 | 3.834280e-51 | -8.615850e-47 |
| Msa1074530 | Msa1357530 | 0.814911 | 1.210162e-51 | -8.615850e-47 |
| Msa1074530 | Msa1372760 | 0.811207 | 7.856037e-51 | -8.615850e-47 |
| Msa1074530 | Msa1376160 | -0.831771 | 1.382215e-55 | -8.615850e-47 |
| Msa1074530 | Msa1376890 | 0.802311 | 5.959521e-49 | -8.615850e-47 |
| Msa1074530 | Msa1376930 | 0.814629 | 1.397515e-51 | -8.615850e-47 |
| Msa1074530 | Msa1377070 | 0.801706 | 7.933627e-49 | -8.615850e-47 |
| Msa1074530 | Msa1378230 | 0.843128 | 1.694719e-58 | -8.615850e-47 |
| Msa1074530 | Msa1379740 | 0.807487 | 4.935133e-50 | -8.615850e-47 |
| Msa1074530 | Msa1380470 | 0.800738 | 1.252145e-48 | -8.615850e-47 |
| Msa1074530 | Msa1384330 | 0.812049 | 5.154213e-51 | -8.615850e-47 |
| Msa1074530 | Msa1384350 | 0.831628 | 1.498991e-55 | -8.615850e-47 |
| Msa1074530 | Msa1392260 | 0.819331 | 1.228548e-52 | -8.615850e-47 |
| Msa1074530 | Msa1393040 | 0.838054 | 3.611372e-57 | -8.615850e-47 |
| Msa1074530 | Msa1398890 | 0.804050 | 2.601627e-49 | -8.615850e-47 |
| Msa1074530 | Msa1403340 | 0.811636 | 6.341748e-51 | -8.615850e-47 |
| Msa1074530 | Msa1407600 | 0.821649 | 3.609102e-53 | -8.615850e-47 |
| Msa1074530 | Msa1420140 | 0.804051 | 2.600732e-49 | -8.615850e-47 |
| Msa1074530 | Msa1445030 | 0.836289 | 1.020800e-56 | -8.615850e-47 |
| Msa1074530 | Msa1451620 | -0.845948 | 2.952583e-59 | -8.615850e-47 |
| Msa1074530 | Msa1454860 | 0.805778 | 1.132699e-49 | -8.615850e-47 |
| Msa1074530 | Msa1459050 | 0.805916 | 1.059254e-49 | -8.615850e-47 |
| Msa1074530 | Msa1459950 | 0.803568 | 3.276948e-49 | -8.615850e-47 |
| Msa1074530 | Msa1464940 | 0.824268 | 8.850243e-54 | -8.615850e-47 |
| Msa0243710 | Msa1074530 | 0.804171 | 2.455470e-49 | -8.615850e-47 |
| Msa0262520 | Msa1074530 | 0.803756 | 2.995390e-49 | -8.615850e-47 |
| Msa0269450 | Msa1074530 | 0.800185 | 1.622939e-48 | -8.615850e-47 |
| Msa0272720 | Msa1074530 | 0.808768 | 2.633349e-50 | -8.615850e-47 |
| Msa0282250 | Msa1074530 | 0.815151 | 1.070866e-51 | -8.615850e-47 |
| Msa0294950 | Msa1074530 | 0.809671 | 1.685978e-50 | -8.615850e-47 |
| Msa0306210 | Msa1074530 | -0.830131 | 3.490777e-55 | -8.615850e-47 |
| Msa0309550 | Msa1074530 | 0.806925 | 6.491792e-50 | -8.615850e-47 |
| Msa0315290 | Msa1074530 | 0.820595 | 6.311518e-53 | -8.615850e-47 |
| Msa0319170 | Msa1074530 | 0.826912 | 2.090652e-54 | -8.615850e-47 |
| Msa0326110 | Msa1074530 | 0.811876 | 5.621647e-51 | -8.615850e-47 |
| Msa0338110 | Msa1074530 | 0.812743 | 3.635365e-51 | -8.615850e-47 |
| Msa0340450 | Msa1074530 | 0.814615 | 1.407755e-51 | -8.615850e-47 |
| Msa0344690 | Msa1074530 | -0.821837 | 3.264648e-53 | -8.615850e-47 |
| Msa0363790 | Msa1074530 | 0.801428 | 9.047718e-49 | -8.615850e-47 |
| Msa0484780 | Msa1074530 | 0.811411 | 7.096119e-51 | -8.615850e-47 |
| Msa0502100 | Msa1074530 | 0.815209 | 1.039622e-51 | -8.615850e-47 |
| Msa0516370 | Msa1074530 | 0.822339 | 2.498045e-53 | -8.615850e-47 |
| Msa0530650 | Msa1074530 | 0.813800 | 2.130794e-51 | -8.615850e-47 |
| Msa0536220 | Msa1074530 | 0.850934 | 1.231665e-60 | -8.615850e-47 |
| Msa0539750 | Msa1074530 | 0.808558 | 2.920412e-50 | -8.615850e-47 |
| Msa0543900 | Msa1074530 | 0.810323 | 1.220486e-50 | -8.615850e-47 |
| Msa0553460 | Msa1074530 | 0.861412 | 1.044470e-63 | -8.615850e-47 |
| Msa0555020 | Msa1074530 | 0.802625 | 5.133334e-49 | -8.615850e-47 |
| Msa0555720 | Msa1074530 | 0.823106 | 1.655695e-53 | -8.615850e-47 |
| Msa0558690 | Msa1074530 | 0.824272 | 8.831021e-54 | -8.615850e-47 |
| Msa0564510 | Msa1074530 | 0.835485 | 1.632812e-56 | -8.615850e-47 |
| Msa0574850 | Msa1074530 | 0.816472 | 5.434099e-52 | -8.615850e-47 |
| Msa0585700 | Msa1074530 | 0.810691 | 1.016165e-50 | -8.615850e-47 |
| Msa0595850 | Msa1074530 | 0.810924 | 9.049271e-51 | -8.615850e-47 |
| Msa0599770 | Msa1074530 | 0.832970 | 6.976538e-56 | -8.615850e-47 |
| Msa0599890 | Msa1074530 | 0.828577 | 8.320025e-55 | -8.615850e-47 |
| Msa0842650 | Msa1074530 | 0.810820 | 9.532074e-51 | -8.615850e-47 |
| Msa0843360 | Msa1074530 | 0.806624 | 7.516145e-50 | -8.615850e-47 |
| Msa0846810 | Msa1074530 | 0.828544 | 8.474122e-55 | -8.615850e-47 |
| Msa0857110 | Msa1074530 | 0.822881 | 1.868087e-53 | -8.615850e-47 |
| Msa0862110 | Msa1074530 | 0.842126 | 3.128197e-58 | -8.615850e-47 |
| Msa0865510 | Msa1074530 | -0.805152 | 1.532379e-49 | -8.615850e-47 |
| Msa0876850 | Msa1074530 | -0.801089 | 1.061399e-48 | -8.615850e-47 |
| Msa0886330 | Msa1074530 | -0.802142 | 6.455710e-49 | -8.615850e-47 |
| Msa0944550 | Msa1074530 | 0.813714 | 2.225927e-51 | -8.615850e-47 |
| Msa0947760 | Msa1074530 | 0.816227 | 6.164952e-52 | -8.615850e-47 |
| Msa0961490 | Msa1074530 | 0.811339 | 7.355144e-51 | -8.615850e-47 |
| Msa0969520 | Msa1074530 | 0.830483 | 2.863448e-55 | -8.615850e-47 |
| Msa0973600 | Msa1074530 | 0.805126 | 1.551971e-49 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1074530 | MtrunA17_Chr7g0257771 | 95.341 | 279 | 13 | 0 | 1 | 279 | 1 | 279 | 7.00e-169 | 468 |
| Msa1074530 | MtrunA17_Chr1g0173571 | 59.932 | 292 | 85 | 8 | 1 | 279 | 1 | 273 | 9.91e-100 | 293 |
| Msa1074530 | MtrunA17_Chr8g0377061 | 37.857 | 140 | 79 | 2 | 146 | 278 | 214 | 352 | 2.57e-16 | 77.8 |
| Msa1074530 | MtrunA17_Chr1g0153281 | 34.862 | 109 | 71 | 0 | 163 | 271 | 499 | 607 | 1.27e-12 | 67.8 |
| Msa1074530 | MtrunA17_Chr1g0203401 | 36.508 | 126 | 78 | 2 | 154 | 278 | 82 | 206 | 1.80e-12 | 65.1 |
| Msa1074530 | MtrunA17_Chr8g0376741 | 33.654 | 104 | 69 | 0 | 170 | 273 | 414 | 517 | 2.48e-12 | 66.6 |
| Msa1074530 | MtrunA17_Chr8g0386521 | 29.787 | 141 | 95 | 1 | 133 | 273 | 55 | 191 | 2.61e-11 | 61.6 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1074530 | AT2G41870.1 | 53.901 | 282 | 96 | 7 | 9 | 279 | 13 | 271 | 1.48e-87 | 262 |
| Msa1074530 | AT3G57540.1 | 51.579 | 285 | 124 | 7 | 5 | 279 | 13 | 293 | 2.42e-82 | 249 |
| Msa1074530 | AT1G67590.1 | 42.593 | 108 | 62 | 0 | 171 | 278 | 229 | 336 | 4.89e-16 | 77.4 |
| Msa1074530 | AT1G30320.1 | 33.929 | 112 | 74 | 0 | 163 | 274 | 387 | 498 | 2.94e-14 | 72.8 |
| Msa1074530 | AT5G23750.3 | 36.842 | 114 | 71 | 1 | 165 | 278 | 114 | 226 | 3.59e-14 | 70.5 |
| Msa1074530 | AT5G23750.1 | 36.842 | 114 | 71 | 1 | 165 | 278 | 87 | 199 | 1.28e-13 | 68.6 |
| Msa1074530 | AT5G23750.2 | 37.500 | 104 | 64 | 1 | 175 | 278 | 96 | 198 | 1.49e-13 | 68.2 |
| Msa1074530 | AT3G48940.1 | 35.849 | 106 | 67 | 1 | 175 | 279 | 70 | 175 | 3.26e-13 | 67.0 |
| Msa1074530 | AT3G61260.1 | 35.354 | 99 | 64 | 0 | 175 | 273 | 107 | 205 | 3.71e-11 | 61.6 |
Find 88 sgRNAs with CRISPR-Local
Find 203 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| CTGTTATTTGTTCATCTTCT+TGG | 0.075826 | 7_2:-72424581 | None:intergenic |
| TTACTTTAATTAATATTTCT+TGG | 0.210335 | 7_2:+72427439 | Msa1074530:three_prime_UTR |
| CACTCTTTAACTAATTAAAA+AGG | 0.214979 | 7_2:-72427204 | None:intergenic |
| CTAAAATATGAATGAGATAA+TGG | 0.299005 | 7_2:+72427552 | Msa1074530:three_prime_UTR |
| TCATGAGGACTTATGTTGTT+AGG | 0.306493 | 7_2:-72424783 | None:intergenic |
| TGCTGATGCTTTCCTCTCTT+CGG | 0.348171 | 7_2:-72427022 | None:intergenic |
| TTTAGAGAAAATTCAGAAGT+AGG | 0.357510 | 7_2:-72427534 | None:intergenic |
| TTTGTTGGTGGTGGAGGAGG+TGG | 0.385999 | 7_2:-72424642 | None:intergenic |
| CGGTTTGTTGGTGGTGGAGG+AGG | 0.395935 | 7_2:-72424645 | None:intergenic |
| CATGAGGACTTATGTTGTTA+GGG | 0.407701 | 7_2:-72424782 | None:intergenic |
| CCACGGTTTGTTGGTGGTGG+AGG | 0.413319 | 7_2:-72424648 | None:intergenic |
| TCACTTATAAACACTCCAAT+TGG | 0.419385 | 7_2:-72427313 | None:intergenic |
| CTATGGCCGCCACGGTTTGT+TGG | 0.439215 | 7_2:-72424657 | None:intergenic |
| TGGAAATGGTGAGAAGAGTT+TGG | 0.439573 | 7_2:-72424393 | None:intergenic |
| CCGCCACGGTTTGTTGGTGG+TGG | 0.444525 | 7_2:-72424651 | None:intergenic |
| GTTTGGACCACAGAGAGAAA+TGG | 0.445627 | 7_2:-72424376 | None:intergenic |
| TTCAGAAGTAGGTAACCATT+AGG | 0.449283 | 7_2:-72427523 | None:intergenic |
| TATACTTAATGAAAACCAAT+TGG | 0.455251 | 7_2:+72427298 | Msa1074530:three_prime_UTR |
| TTCAATGCTCTTGTTCTAGC+AGG | 0.458326 | 7_2:+72424747 | Msa1074530:CDS |
| CAATGGATGGGAGAGTGAAC+AGG | 0.460888 | 7_2:+72425121 | Msa1074530:CDS |
| GGAGACGGAACAGGATCAAA+AGG | 0.469993 | 7_2:-72424921 | None:intergenic |
| CCACACCAAACTGTTCCTAA+TGG | 0.474772 | 7_2:+72427508 | Msa1074530:three_prime_UTR |
| AGGTTCAGAAAGCTACTTCA+TGG | 0.476454 | 7_2:+72425141 | Msa1074530:CDS |
| AACAAACCCTTTGGCGATTG+TGG | 0.479682 | 7_2:+72424887 | Msa1074530:CDS |
| GTCGGTGGATAGAGTGAAGA+AGG | 0.481158 | 7_2:+72425013 | Msa1074530:CDS |
| GGTAACCATTAGGAACAGTT+TGG | 0.482257 | 7_2:-72427513 | None:intergenic |
| GAGATGACGAACGGTGGCTA+TGG | 0.485036 | 7_2:-72424674 | None:intergenic |
| AGAGAAAAGAGCAAGAGCCT+TGG | 0.496303 | 7_2:+72426960 | Msa1074530:CDS |
| GATGGAAGAAACAAACCCTT+TGG | 0.499116 | 7_2:+72424878 | Msa1074530:CDS |
| GGTGGAGGAGGTGGAAGTCG+AGG | 0.504511 | 7_2:-72424633 | None:intergenic |
| CTGCTAGTAGGAGACGGAAC+AGG | 0.505373 | 7_2:-72424930 | None:intergenic |
| GCTAATCTTATGAGAGCAGT+TGG | 0.511217 | 7_2:+72427087 | Msa1074530:CDS |
| TTGATGAGGTTGTTAGTGAA+TGG | 0.511495 | 7_2:-72424413 | None:intergenic |
| ATTAGTTAAAGAGTGCAAGA+TGG | 0.512460 | 7_2:+72427212 | Msa1074530:three_prime_UTR |
| TAGAGAAGAGGATCATATGA+TGG | 0.513673 | 7_2:+72424860 | Msa1074530:CDS |
| AAGTTGCTAAAATTAACAAC+AGG | 0.513840 | 7_2:+72425075 | Msa1074530:CDS |
| AGGTTGTTAGTGAATGGAAA+TGG | 0.514033 | 7_2:-72424407 | None:intergenic |
| ACAATAACAATAACAATTTG+AGG | 0.516591 | 7_2:+72424832 | Msa1074530:CDS |
| ATTGTGGTTGTTACACACTT+TGG | 0.523249 | 7_2:+72427403 | Msa1074530:three_prime_UTR |
| TTCACTATCTGTGCTAGCCA+TGG | 0.524133 | 7_2:-72424700 | None:intergenic |
| CCGTTCGTCATCTCTATCCA+TGG | 0.526877 | 7_2:+72424683 | Msa1074530:CDS |
| TGGCCGCCACGGTTTGTTGG+TGG | 0.527737 | 7_2:-72424654 | None:intergenic |
| AGAGATGATGCTGTCATCAA+TGG | 0.530421 | 7_2:+72425104 | Msa1074530:CDS |
| ACCACAGAGAGAAATGGAAA+AGG | 0.544337 | 7_2:-72424370 | None:intergenic |
| ATTAGCAATCTCAAGAACTC+TGG | 0.548796 | 7_2:-72427070 | None:intergenic |
| TGTTATGAAATAACAAAGTG+AGG | 0.554740 | 7_2:-72424476 | None:intergenic |
| TCCTACTAGCAGAAGAACTA+CGG | 0.555436 | 7_2:+72424941 | Msa1074530:CDS |
| AACGGTGGCTATGGCCGCCA+CGG | 0.556481 | 7_2:-72424665 | None:intergenic |
| TGTTGCAACTTTGCAAGTGA+CGG | 0.557497 | 7_2:-72427475 | None:intergenic |
| TTTGAGGAGGATTAGAGAAG+AGG | 0.558611 | 7_2:+72424848 | Msa1074530:CDS |
| TTATCTACCACAATCGCCAA+AGG | 0.563144 | 7_2:-72424894 | None:intergenic |
| TTCATCTGATATATGGCTGG+TGG | 0.565413 | 7_2:-72424556 | None:intergenic |
| GTCGAGGTGGTGTTAAAGCA+TGG | 0.566949 | 7_2:-72424617 | None:intergenic |
| TTAGCTGTTTCATGTTCATG+AGG | 0.567830 | 7_2:-72424798 | None:intergenic |
| GCCGTAGTTCTTCTGCTAGT+AGG | 0.572201 | 7_2:-72424942 | None:intergenic |
| TATCTACCACAATCGCCAAA+GGG | 0.572915 | 7_2:-72424893 | None:intergenic |
| AGCAGAAGAACTACGGCTGG+TGG | 0.576648 | 7_2:+72424948 | Msa1074530:CDS |
| TACAATCTCAATAGTACGGA+GGG | 0.579246 | 7_2:-72424505 | None:intergenic |
| GAGGAAATTTCATTCAAGCA+TGG | 0.581153 | 7_2:-72424457 | None:intergenic |
| AGGAACAGTTTGGTGTGGTG+TGG | 0.581154 | 7_2:-72427503 | None:intergenic |
| GGAACAGTTTGGTGTGGTGT+GGG | 0.584773 | 7_2:-72427502 | None:intergenic |
| ACTAGCAGAAGAACTACGGC+TGG | 0.586567 | 7_2:+72424945 | Msa1074530:CDS |
| GGAGGAGGTGGAAGTCGAGG+TGG | 0.587365 | 7_2:-72424630 | None:intergenic |
| TGTGTACAATCTCAATAGTA+CGG | 0.588709 | 7_2:-72424509 | None:intergenic |
| CTCGAAGAAAAGCCGAAGAG+AGG | 0.591953 | 7_2:+72427010 | Msa1074530:CDS |
| ATGATGCTGTCATCAATGGA+TGG | 0.593521 | 7_2:+72425108 | Msa1074530:CDS |
| GCTTAATTATTTGATCATTG+TGG | 0.610985 | 7_2:+72427387 | Msa1074530:three_prime_UTR |
| AGTACTCGTTCAAGTGGTCA+AGG | 0.616828 | 7_2:+72424972 | Msa1074530:CDS |
| GAGACGGAACAGGATCAAAA+GGG | 0.628833 | 7_2:-72424920 | None:intergenic |
| GGTGGAAGTACTCGTTCAAG+TGG | 0.633101 | 7_2:+72424966 | Msa1074530:CDS |
| AATAGATTAGTGTTTGAATG+TGG | 0.637549 | 7_2:+72427337 | Msa1074530:three_prime_UTR |
| CCATTAGGAACAGTTTGGTG+TGG | 0.637676 | 7_2:-72427508 | None:intergenic |
| GTTCTTCTGCTAGTAGGAGA+CGG | 0.637966 | 7_2:-72424936 | None:intergenic |
| TGATGCTGTCATCAATGGAT+GGG | 0.638726 | 7_2:+72425109 | Msa1074530:CDS |
| ATAACAATAACAATTTGAGG+AGG | 0.648714 | 7_2:+72424835 | Msa1074530:CDS |
| AGAGAGGAAAGCATCAGCAG+AGG | 0.652381 | 7_2:+72427026 | Msa1074530:CDS |
| TTGATGCAAAGATATCAGCT+TGG | 0.653643 | 7_2:+72425042 | Msa1074530:CDS |
| TGGTAGTGAAGAACATGTGT+CGG | 0.675585 | 7_2:+72424995 | Msa1074530:CDS |
| GGTGAGTGTACTAAGTGGTG+TGG | 0.683723 | 7_2:+72427358 | Msa1074530:three_prime_UTR |
| CCTCCACCACCAACAAACCG+TGG | 0.687594 | 7_2:+72424648 | Msa1074530:CDS |
| TAGTGAAGAACATGTGTCGG+TGG | 0.696232 | 7_2:+72424998 | Msa1074530:CDS |
| TTCATGGATGAAGAAAGTTG+AGG | 0.696748 | 7_2:+72425157 | Msa1074530:CDS |
| CCATGGATAGAGATGACGAA+CGG | 0.697357 | 7_2:-72424683 | None:intergenic |
| TGGATAGAGATGACGAACGG+TGG | 0.707481 | 7_2:-72424680 | None:intergenic |
| ACTCGTTCAAGTGGTCAAGG+TGG | 0.708848 | 7_2:+72424975 | Msa1074530:CDS |
| CCACCACCAACAAACCGTGG+CGG | 0.715624 | 7_2:+72424651 | Msa1074530:CDS |
| GTACAATCTCAATAGTACGG+AGG | 0.722339 | 7_2:-72424506 | None:intergenic |
| AATGTGGTGAGTGTACTAAG+TGG | 0.741668 | 7_2:+72427353 | Msa1074530:three_prime_UTR |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | TAAAATTTTTTAAAAAAAAA+TGG | - | chr7_2:72426212-72426231 | None:intergenic | 0.0% |
| !! | TATATTAATACTAAGATAAA+AGG | + | chr7_2:72425453-72425472 | Msa1074530:intron | 10.0% |
| !! | TAAAAGTTAAATTCTAATTA+GGG | - | chr7_2:72425787-72425806 | None:intergenic | 10.0% |
| !! | TTAAAAGTTAAATTCTAATT+AGG | - | chr7_2:72425788-72425807 | None:intergenic | 10.0% |
| !!! | AATTAGAATTTAACTTTTAA+AGG | + | chr7_2:72425788-72425807 | Msa1074530:intron | 10.0% |
| !!! | ATTAGAATTTAACTTTTAAA+GGG | + | chr7_2:72425789-72425808 | Msa1074530:intron | 10.0% |
| !! | TTATATGAAGAAAAAAAATT+GGG | - | chr7_2:72426053-72426072 | None:intergenic | 10.0% |
| !! | ATTATATGAAGAAAAAAAAT+TGG | - | chr7_2:72426054-72426073 | None:intergenic | 10.0% |
| !!! | TTTTGTTATATACTTATATA+TGG | - | chr7_2:72426439-72426458 | None:intergenic | 10.0% |
| !!! | TTAATATTGAAAACTTTTTT+AGG | + | chr7_2:72427156-72427175 | Msa1074530:three_prime_UTR | 10.0% |
| !! | TTACTTTAATTAATATTTCT+TGG | + | chr7_2:72427439-72427458 | Msa1074530:three_prime_UTR | 10.0% |
| !! | ATTAATTTATTATTCTCGAA+TGG | + | chr7_2:72425416-72425435 | Msa1074530:intron | 15.0% |
| !! | ATTATTTCATTGAATAATGA+AGG | - | chr7_2:72425579-72425598 | None:intergenic | 15.0% |
| !! | CATATATTATATACAATCAA+TGG | - | chr7_2:72426086-72426105 | None:intergenic | 15.0% |
| !!! | TTTTTAAAAAAAAATGGCTT+AGG | - | chr7_2:72426206-72426225 | None:intergenic | 15.0% |
| !!! | TTTTTTTTAGACAAACATTA+GGG | - | chr7_2:72426332-72426351 | None:intergenic | 15.0% |
| !!! | AAAAAAGTAATATCAAGTTT+TGG | + | chr7_2:72426346-72426365 | Msa1074530:intron | 15.0% |
| !! | TATAAGTATATAACAAAACA+TGG | + | chr7_2:72426441-72426460 | Msa1074530:intron | 15.0% |
| !! | TATATAAAAATAGCATGATA+AGG | + | chr7_2:72427249-72427268 | Msa1074530:three_prime_UTR | 15.0% |
| !! | ACAATAACAATAACAATTTG+AGG | + | chr7_2:72424832-72424851 | Msa1074530:CDS | 20.0% |
| !! | AAATACAACAGAGTTATAAA+GGG | - | chr7_2:72425615-72425634 | None:intergenic | 20.0% |
| !!! | AATTTCATTGTAGTTTGTAA+TGG | - | chr7_2:72425753-72425772 | None:intergenic | 20.0% |
| !!! | TAGACAAATTTTAGTTTGTT+AGG | + | chr7_2:72425939-72425958 | Msa1074530:intron | 20.0% |
| !!! | AGACAAATTTTAGTTTGTTA+GGG | + | chr7_2:72425940-72425959 | Msa1074530:intron | 20.0% |
| !! | TAACTAACACATCTATAAAA+TGG | + | chr7_2:72426175-72426194 | Msa1074530:intron | 20.0% |
| !!! | TTTTTTTAGACAAACATTAG+GGG | - | chr7_2:72426331-72426350 | None:intergenic | 20.0% |
| !!! | CTTTTTTTTAGACAAACATT+AGG | - | chr7_2:72426333-72426352 | None:intergenic | 20.0% |
| !! | TGGATATGTTAGATTATTAA+CGG | + | chr7_2:72426461-72426480 | Msa1074530:intron | 20.0% |
| !! | GTGAAATAAATAAATGATTG+TGG | - | chr7_2:72426565-72426584 | None:intergenic | 20.0% |
| !!! | AACTTAGAAGAAAGATTTTT+TGG | - | chr7_2:72427124-72427143 | None:intergenic | 20.0% |
| !! | CACTCTTTAACTAATTAAAA+AGG | - | chr7_2:72427207-72427226 | None:intergenic | 20.0% |
| !! | TATACTTAATGAAAACCAAT+TGG | + | chr7_2:72427298-72427317 | Msa1074530:three_prime_UTR | 20.0% |
| !! | CTAAAATATGAATGAGATAA+TGG | + | chr7_2:72427552-72427571 | Msa1074530:three_prime_UTR | 20.0% |
| ! | TGTTATGAAATAACAAAGTG+AGG | - | chr7_2:72424479-72424498 | None:intergenic | 25.0% |
| ! | ATAACAATAACAATTTGAGG+AGG | + | chr7_2:72424835-72424854 | Msa1074530:CDS | 25.0% |
| ! | AAGTTGCTAAAATTAACAAC+AGG | + | chr7_2:72425075-72425094 | Msa1074530:CDS | 25.0% |
| !!! | TTTTTTCTTCTTCTTTCTCA+CGG | + | chr7_2:72425186-72425205 | Msa1074530:intron | 25.0% |
| !! | GGTGAAGAATTATTTTCTAA+TGG | + | chr7_2:72425474-72425493 | Msa1074530:intron | 25.0% |
| !! | TTATTTTCTAATGGTTGTTG+AGG | + | chr7_2:72425483-72425502 | Msa1074530:intron | 25.0% |
| ! | CAAATACAACAGAGTTATAA+AGG | - | chr7_2:72425616-72425635 | None:intergenic | 25.0% |
| ! | GAAAAAAAATGCTAGTAATG+AGG | - | chr7_2:72425846-72425865 | None:intergenic | 25.0% |
| !!! | GACAAATTTTAGTTTGTTAG+GGG | + | chr7_2:72425941-72425960 | Msa1074530:intron | 25.0% |
| ! | AAAAAAATTGGGTAATCTTC+TGG | - | chr7_2:72426042-72426061 | None:intergenic | 25.0% |
| ! | CAATAATTAGACAATAATGC+AGG | - | chr7_2:72426702-72426721 | None:intergenic | 25.0% |
| ! | TTGTTAAACAAAATGCTAGA+TGG | - | chr7_2:72426780-72426799 | None:intergenic | 25.0% |
| ! | AATTTGAGTATTTAACGTAG+AGG | - | chr7_2:72426808-72426827 | None:intergenic | 25.0% |
| !!! | AATGCTTTGTTTTACTACAA+TGG | - | chr7_2:72426848-72426867 | None:intergenic | 25.0% |
| !!! | CATGACATGTGATTTTTTTT+GGG | - | chr7_2:72426926-72426945 | None:intergenic | 25.0% |
| !!! | CTTTTTTAGGCACAAAAAAA+AGG | + | chr7_2:72427169-72427188 | Msa1074530:three_prime_UTR | 25.0% |
| ! | AATAGATTAGTGTTTGAATG+TGG | + | chr7_2:72427337-72427356 | Msa1074530:three_prime_UTR | 25.0% |
| ! | GCTTAATTATTTGATCATTG+TGG | + | chr7_2:72427387-72427406 | Msa1074530:three_prime_UTR | 25.0% |
| ! | TTTAGAGAAAATTCAGAAGT+AGG | - | chr7_2:72427537-72427556 | None:intergenic | 25.0% |
| !!! | ATAGTGTGTGTATTTTGATG+AGG | - | chr7_2:72424430-72424449 | None:intergenic | 30.0% |
| TGTGTACAATCTCAATAGTA+CGG | - | chr7_2:72424512-72424531 | None:intergenic | 30.0% | |
| !! | CTTGGTTTTCATCTGATATA+TGG | - | chr7_2:72424566-72424585 | None:intergenic | 30.0% |
| ! | CTGTTATTTGTTCATCTTCT+TGG | - | chr7_2:72424584-72424603 | None:intergenic | 30.0% |
| ATGCTGTGGTAATAATTAGT+AGG | + | chr7_2:72425255-72425274 | Msa1074530:intron | 30.0% | |
| AACCAATCAATACTTGACAA+AGG | + | chr7_2:72425315-72425334 | Msa1074530:intron | 30.0% | |
| !! | ATCCTTTGTCAAGTATTGAT+TGG | - | chr7_2:72425320-72425339 | None:intergenic | 30.0% |
| ! | GCTTGATAACATAAAACCAA+AGG | + | chr7_2:72425657-72425676 | Msa1074530:intron | 30.0% |
| TGATTTAGACGTTAAACCTT+TGG | - | chr7_2:72425676-72425695 | None:intergenic | 30.0% | |
| AAAATGATGTTAAGCCAACA+CGG | + | chr7_2:72425710-72425729 | Msa1074530:intron | 30.0% | |
| ! | TGTAGTTTGTAATGGCTAAT+TGG | - | chr7_2:72425745-72425764 | None:intergenic | 30.0% |
| !! | ACTTTTAAAGGGAATTGTGT+AGG | + | chr7_2:72425800-72425819 | Msa1074530:intron | 30.0% |
| GTATTTCATGTTTCCTTACT+CGG | + | chr7_2:72426112-72426131 | Msa1074530:intron | 30.0% | |
| TTATAGATGTGTTAGTTACC+AGG | - | chr7_2:72426173-72426192 | None:intergenic | 30.0% | |
| ! | ATGACATATGTTAGTGTTGA+GGG | - | chr7_2:72426265-72426284 | None:intergenic | 30.0% |
| !!! | AATATCAAGTTTTGGTGTTG+AGG | + | chr7_2:72426354-72426373 | Msa1074530:intron | 30.0% |
| ! | TTTTCCAATGACAGCAAAAA+GGG | + | chr7_2:72426736-72426755 | Msa1074530:intron | 30.0% |
| !!! | GCATGACATGTGATTTTTTT+TGG | - | chr7_2:72426927-72426946 | None:intergenic | 30.0% |
| !!! | TAGAAGAAAGATTTTTTGGC+AGG | - | chr7_2:72427120-72427139 | None:intergenic | 30.0% |
| ! | ATTAGTTAAAGAGTGCAAGA+TGG | + | chr7_2:72427212-72427231 | Msa1074530:three_prime_UTR | 30.0% |
| TCACTTATAAACACTCCAAT+TGG | - | chr7_2:72427316-72427335 | None:intergenic | 30.0% | |
| AGGTTGTTAGTGAATGGAAA+TGG | - | chr7_2:72424410-72424429 | None:intergenic | 35.0% | |
| TTGATGAGGTTGTTAGTGAA+TGG | - | chr7_2:72424416-72424435 | None:intergenic | 35.0% | |
| GAGGAAATTTCATTCAAGCA+TGG | - | chr7_2:72424460-72424479 | None:intergenic | 35.0% | |
| TACAATCTCAATAGTACGGA+GGG | - | chr7_2:72424508-72424527 | None:intergenic | 35.0% | |
| ! | GTTTTCATCTGATATATGGC+TGG | - | chr7_2:72424562-72424581 | None:intergenic | 35.0% |
| CATGAGGACTTATGTTGTTA+GGG | - | chr7_2:72424785-72424804 | None:intergenic | 35.0% | |
| TCATGAGGACTTATGTTGTT+AGG | - | chr7_2:72424786-72424805 | None:intergenic | 35.0% | |
| ! | TTAGCTGTTTCATGTTCATG+AGG | - | chr7_2:72424801-72424820 | None:intergenic | 35.0% |
| TAGAGAAGAGGATCATATGA+TGG | + | chr7_2:72424860-72424879 | Msa1074530:CDS | 35.0% | |
| TTGATGCAAAGATATCAGCT+TGG | + | chr7_2:72425042-72425061 | Msa1074530:CDS | 35.0% | |
| TTCATGGATGAAGAAAGTTG+AGG | + | chr7_2:72425157-72425176 | Msa1074530:CDS | 35.0% | |
| CAGCATGAAACACATAACAA+CGG | - | chr7_2:72425241-72425260 | None:intergenic | 35.0% | |
| TTGTTATGTGTTTCATGCTG+TGG | + | chr7_2:72425241-72425260 | Msa1074530:intron | 35.0% | |
| !! | AGTATTGATTGGTTCGAAGT+TGG | - | chr7_2:72425309-72425328 | None:intergenic | 35.0% |
| TTACCATAGTAACTCAAGCT+AGG | - | chr7_2:72425383-72425402 | None:intergenic | 35.0% | |
| AAATGATGTTAAGCCAACAC+GGG | + | chr7_2:72425711-72425730 | Msa1074530:intron | 35.0% | |
| ! | TCAGACTTTTGATGTTGATG+TGG | - | chr7_2:72426236-72426255 | None:intergenic | 35.0% |
| ! | TGACATATGTTAGTGTTGAG+GGG | - | chr7_2:72426264-72426283 | None:intergenic | 35.0% |
| CATGACATATGTTAGTGTTG+AGG | - | chr7_2:72426266-72426285 | None:intergenic | 35.0% | |
| TTTCCAATGCAATGCAAAAG+AGG | - | chr7_2:72426609-72426628 | None:intergenic | 35.0% | |
| ! | CTTTTCCAATGACAGCAAAA+AGG | + | chr7_2:72426735-72426754 | Msa1074530:intron | 35.0% |
| TTTCCAATGACAGCAAAAAG+GGG | + | chr7_2:72426737-72426756 | Msa1074530:intron | 35.0% | |
| TAGATGGTGAGAAACATGTT+TGG | - | chr7_2:72426764-72426783 | None:intergenic | 35.0% | |
| !! | CAAAGCATTGACTAACAACT+CGG | + | chr7_2:72426859-72426878 | Msa1074530:intron | 35.0% |
| !! | AAAGCATTGACTAACAACTC+GGG | + | chr7_2:72426860-72426879 | Msa1074530:intron | 35.0% |
| ATTAGCAATCTCAAGAACTC+TGG | - | chr7_2:72427073-72427092 | None:intergenic | 35.0% | |
| !!! | AAGAAAGATTTTTTGGCAGG+AGG | - | chr7_2:72427117-72427136 | None:intergenic | 35.0% |
| ATTGTGGTTGTTACACACTT+TGG | + | chr7_2:72427403-72427422 | Msa1074530:three_prime_UTR | 35.0% | |
| TTCAGAAGTAGGTAACCATT+AGG | - | chr7_2:72427526-72427545 | None:intergenic | 35.0% | |
| ! | TCCTTTTCCATTTCTCTCTG+TGG | + | chr7_2:72424369-72424388 | Msa1074530:five_prime_UTR | 40.0% |
| ACCACAGAGAGAAATGGAAA+AGG | - | chr7_2:72424373-72424392 | None:intergenic | 40.0% | |
| TGGAAATGGTGAGAAGAGTT+TGG | - | chr7_2:72424396-72424415 | None:intergenic | 40.0% | |
| GTACAATCTCAATAGTACGG+AGG | - | chr7_2:72424509-72424528 | None:intergenic | 40.0% | |
| TTCATCTGATATATGGCTGG+TGG | - | chr7_2:72424559-72424578 | None:intergenic | 40.0% | |
| TTCAATGCTCTTGTTCTAGC+AGG | + | chr7_2:72424747-72424766 | Msa1074530:CDS | 40.0% | |
| TTTGAGGAGGATTAGAGAAG+AGG | + | chr7_2:72424848-72424867 | Msa1074530:CDS | 40.0% | |
| GATGGAAGAAACAAACCCTT+TGG | + | chr7_2:72424878-72424897 | Msa1074530:CDS | 40.0% | |
| TATCTACCACAATCGCCAAA+GGG | - | chr7_2:72424896-72424915 | None:intergenic | 40.0% | |
| TTATCTACCACAATCGCCAA+AGG | - | chr7_2:72424897-72424916 | None:intergenic | 40.0% | |
| TCCTACTAGCAGAAGAACTA+CGG | + | chr7_2:72424941-72424960 | Msa1074530:CDS | 40.0% | |
| ! | TGGTAGTGAAGAACATGTGT+CGG | + | chr7_2:72424995-72425014 | Msa1074530:CDS | 40.0% |
| AGAGATGATGCTGTCATCAA+TGG | + | chr7_2:72425104-72425123 | Msa1074530:CDS | 40.0% | |
| ATGATGCTGTCATCAATGGA+TGG | + | chr7_2:72425108-72425127 | Msa1074530:CDS | 40.0% | |
| TGATGCTGTCATCAATGGAT+GGG | + | chr7_2:72425109-72425128 | Msa1074530:CDS | 40.0% | |
| AGGTTCAGAAAGCTACTTCA+TGG | + | chr7_2:72425141-72425160 | Msa1074530:CDS | 40.0% | |
| !! | TCACGGTGTTATTTGCATGT+AGG | + | chr7_2:72425203-72425222 | Msa1074530:intron | 40.0% |
| TTGCCTAGCTTGAGTTACTA+TGG | + | chr7_2:72425377-72425396 | Msa1074530:intron | 40.0% | |
| ! | CTACTTACTAGCTAGTTTCC+CGG | - | chr7_2:72425530-72425549 | None:intergenic | 40.0% |
| TAAAGGGAATTGTGTAGGAG+AGG | + | chr7_2:72425805-72425824 | Msa1074530:intron | 40.0% | |
| GAATTGTGTAGGAGAGGTTT+GGG | + | chr7_2:72425811-72425830 | Msa1074530:intron | 40.0% | |
| AATTGTGTAGGAGAGGTTTG+GGG | + | chr7_2:72425812-72425831 | Msa1074530:intron | 40.0% | |
| TTAGAGTACAATCAACCGCT+AGG | - | chr7_2:72426138-72426157 | None:intergenic | 40.0% | |
| ! | GATCCTCTTTTGCATTGCAT+TGG | + | chr7_2:72426603-72426622 | Msa1074530:intron | 40.0% |
| AAGCCAATAACCTCATTACG+TGG | + | chr7_2:72426640-72426659 | Msa1074530:intron | 40.0% | |
| ACAACAGACTCCTATAGCTT+TGG | + | chr7_2:72426676-72426695 | Msa1074530:intron | 40.0% | |
| ATAATGCAGGCCAAAGCTAT+AGG | - | chr7_2:72426689-72426708 | None:intergenic | 40.0% | |
| !!! | TTTGTTTTGCGTCTTCTCCA+AGG | - | chr7_2:72426980-72426999 | None:intergenic | 40.0% |
| GGCAAAAAGAGGAACTAAAG+TGG | + | chr7_2:72427047-72427066 | Msa1074530:CDS | 40.0% | |
| GCTAATCTTATGAGAGCAGT+TGG | + | chr7_2:72427087-72427106 | Msa1074530:CDS | 40.0% | |
| AATGTGGTGAGTGTACTAAG+TGG | + | chr7_2:72427353-72427372 | Msa1074530:three_prime_UTR | 40.0% | |
| TGTTGCAACTTTGCAAGTGA+CGG | - | chr7_2:72427478-72427497 | None:intergenic | 40.0% | |
| GGTAACCATTAGGAACAGTT+TGG | - | chr7_2:72427516-72427535 | None:intergenic | 40.0% | |
| GTTTGGACCACAGAGAGAAA+TGG | - | chr7_2:72424379-72424398 | None:intergenic | 45.0% | |
| CCATGGATAGAGATGACGAA+CGG | - | chr7_2:72424686-72424705 | None:intergenic | 45.0% | |
| TTCACTATCTGTGCTAGCCA+TGG | - | chr7_2:72424703-72424722 | None:intergenic | 45.0% | |
| AACAAACCCTTTGGCGATTG+TGG | + | chr7_2:72424887-72424906 | Msa1074530:CDS | 45.0% | |
| GAGACGGAACAGGATCAAAA+GGG | - | chr7_2:72424923-72424942 | None:intergenic | 45.0% | |
| GTTCTTCTGCTAGTAGGAGA+CGG | - | chr7_2:72424939-72424958 | None:intergenic | 45.0% | |
| AGTACTCGTTCAAGTGGTCA+AGG | + | chr7_2:72424972-72424991 | Msa1074530:CDS | 45.0% | |
| TAGTGAAGAACATGTGTCGG+TGG | + | chr7_2:72424998-72425017 | Msa1074530:CDS | 45.0% | |
| TGGTTGTTGAGGAACCTAAC+TGG | + | chr7_2:72425494-72425513 | Msa1074530:intron | 45.0% | |
| GGTTGTTGAGGAACCTAACT+GGG | + | chr7_2:72425495-72425514 | Msa1074530:intron | 45.0% | |
| GTTGTTGAGGAACCTAACTG+GGG | + | chr7_2:72425496-72425515 | Msa1074530:intron | 45.0% | |
| ATTGGCTATGTTTCCCGTGT+TGG | - | chr7_2:72425727-72425746 | None:intergenic | 45.0% | |
| GGAATTGTGTAGGAGAGGTT+TGG | + | chr7_2:72425810-72425829 | Msa1074530:intron | 45.0% | |
| ATTGTGTAGGAGAGGTTTGG+GGG | + | chr7_2:72425813-72425832 | Msa1074530:intron | 45.0% | |
| TCATTCTCTAACACGCTGCA+GGG | + | chr7_2:72425979-72425998 | Msa1074530:intron | 45.0% | |
| AGCCACACACATCATACAGT+GGG | - | chr7_2:72426010-72426029 | None:intergenic | 45.0% | |
| TAGCCACACACATCATACAG+TGG | - | chr7_2:72426011-72426030 | None:intergenic | 45.0% | |
| CCACCACGTAATGAGGTTAT+TGG | - | chr7_2:72426646-72426665 | None:intergenic | 45.0% | |
| CCAATAACCTCATTACGTGG+TGG | + | chr7_2:72426643-72426662 | Msa1074530:intron | 45.0% | |
| ATAACCTCATTACGTGGTGG+TGG | + | chr7_2:72426646-72426665 | Msa1074530:intron | 45.0% | |
| AAAACCACCACCACGTAATG+AGG | - | chr7_2:72426653-72426672 | None:intergenic | 45.0% | |
| AGAGAAAAGAGCAAGAGCCT+TGG | + | chr7_2:72426960-72426979 | Msa1074530:CDS | 45.0% | |
| TGCTGATGCTTTCCTCTCTT+CGG | - | chr7_2:72427025-72427044 | None:intergenic | 45.0% | |
| ! | CCATTAGGAACAGTTTGGTG+TGG | - | chr7_2:72427511-72427530 | None:intergenic | 45.0% |
| CCACACCAAACTGTTCCTAA+TGG | + | chr7_2:72427508-72427527 | Msa1074530:three_prime_UTR | 45.0% | |
| ! | GTCGAGGTGGTGTTAAAGCA+TGG | - | chr7_2:72424620-72424639 | None:intergenic | 50.0% |
| TGGATAGAGATGACGAACGG+TGG | - | chr7_2:72424683-72424702 | None:intergenic | 50.0% | |
| CCGTTCGTCATCTCTATCCA+TGG | + | chr7_2:72424683-72424702 | Msa1074530:CDS | 50.0% | |
| GGAGACGGAACAGGATCAAA+AGG | - | chr7_2:72424924-72424943 | None:intergenic | 50.0% | |
| GCCGTAGTTCTTCTGCTAGT+AGG | - | chr7_2:72424945-72424964 | None:intergenic | 50.0% | |
| ACTAGCAGAAGAACTACGGC+TGG | + | chr7_2:72424945-72424964 | Msa1074530:CDS | 50.0% | |
| !! | GGTGGAAGTACTCGTTCAAG+TGG | + | chr7_2:72424966-72424985 | Msa1074530:CDS | 50.0% |
| ACTCGTTCAAGTGGTCAAGG+TGG | + | chr7_2:72424975-72424994 | Msa1074530:CDS | 50.0% | |
| GTCGGTGGATAGAGTGAAGA+AGG | + | chr7_2:72425013-72425032 | Msa1074530:CDS | 50.0% | |
| CAATGGATGGGAGAGTGAAC+AGG | + | chr7_2:72425121-72425140 | Msa1074530:CDS | 50.0% | |
| AGGAACCTAACTGGGGTGTA+GGG | + | chr7_2:72425503-72425522 | Msa1074530:intron | 50.0% | |
| CTCATTCTCTAACACGCTGC+AGG | + | chr7_2:72425978-72425997 | Msa1074530:intron | 50.0% | |
| GACCCACTGTATGATGTGTG+TGG | + | chr7_2:72426005-72426024 | Msa1074530:intron | 50.0% | |
| TGTTTCCTTACTCGGCCTAG+CGG | + | chr7_2:72426120-72426139 | Msa1074530:intron | 50.0% | |
| !! | GGACCCCTTTTTGCTGTCAT+TGG | - | chr7_2:72426743-72426762 | None:intergenic | 50.0% |
| CTCGAAGAAAAGCCGAAGAG+AGG | + | chr7_2:72427010-72427029 | Msa1074530:CDS | 50.0% | |
| !! | AGAGAGGAAAGCATCAGCAG+AGG | + | chr7_2:72427026-72427045 | Msa1074530:CDS | 50.0% |
| GCATCAGCAGAGGCAAAAAG+AGG | + | chr7_2:72427036-72427055 | Msa1074530:CDS | 50.0% | |
| GGTGAGTGTACTAAGTGGTG+TGG | + | chr7_2:72427358-72427377 | Msa1074530:three_prime_UTR | 50.0% | |
| !! | GGAACAGTTTGGTGTGGTGT+GGG | - | chr7_2:72427505-72427524 | None:intergenic | 50.0% |
| !! | AGGAACAGTTTGGTGTGGTG+TGG | - | chr7_2:72427506-72427525 | None:intergenic | 50.0% |
| !! | TTTGTTGGTGGTGGAGGAGG+TGG | - | chr7_2:72424645-72424664 | None:intergenic | 55.0% |
| GAGATGACGAACGGTGGCTA+TGG | - | chr7_2:72424677-72424696 | None:intergenic | 55.0% | |
| CTGCTAGTAGGAGACGGAAC+AGG | - | chr7_2:72424933-72424952 | None:intergenic | 55.0% | |
| AGCAGAAGAACTACGGCTGG+TGG | + | chr7_2:72424948-72424967 | Msa1074530:CDS | 55.0% | |
| GAGGAACCTAACTGGGGTGT+AGG | + | chr7_2:72425502-72425521 | Msa1074530:intron | 55.0% | |
| GGAACCTAACTGGGGTGTAG+GGG | + | chr7_2:72425504-72425523 | Msa1074530:intron | 55.0% | |
| TCTCTAACACGCTGCAGGGA+CGG | + | chr7_2:72425983-72426002 | Msa1074530:intron | 55.0% | |
| ATCAACCGCTAGGCCGAGTA+AGG | - | chr7_2:72426128-72426147 | None:intergenic | 55.0% | |
| CTCTAACAATCTGCGCGTCC+TGG | + | chr7_2:72426152-72426171 | Msa1074530:intron | 55.0% | |
| !! | CGGTTTGTTGGTGGTGGAGG+AGG | - | chr7_2:72424648-72424667 | None:intergenic | 60.0% |
| !! | CCACGGTTTGTTGGTGGTGG+AGG | - | chr7_2:72424651-72424670 | None:intergenic | 60.0% |
| CCTCCACCACCAACAAACCG+TGG | + | chr7_2:72424648-72424667 | Msa1074530:CDS | 60.0% | |
| CCACCACCAACAAACCGTGG+CGG | + | chr7_2:72424651-72424670 | Msa1074530:CDS | 60.0% | |
| CTATGGCCGCCACGGTTTGT+TGG | - | chr7_2:72424660-72424679 | None:intergenic | 60.0% | |
| GGAGGAGGTGGAAGTCGAGG+TGG | - | chr7_2:72424633-72424652 | None:intergenic | 65.0% | |
| GGTGGAGGAGGTGGAAGTCG+AGG | - | chr7_2:72424636-72424655 | None:intergenic | 65.0% | |
| !! | CCGCCACGGTTTGTTGGTGG+TGG | - | chr7_2:72424654-72424673 | None:intergenic | 65.0% |
| !! | TGGCCGCCACGGTTTGTTGG+TGG | - | chr7_2:72424657-72424676 | None:intergenic | 65.0% |
| AACGGTGGCTATGGCCGCCA+CGG | - | chr7_2:72424668-72424687 | None:intergenic | 65.0% | |
| CCTAACTGGGGTGTAGGGGC+CGG | + | chr7_2:72425508-72425527 | Msa1074530:intron | 65.0% | |
| CTAACTGGGGTGTAGGGGCC+GGG | + | chr7_2:72425509-72425528 | Msa1074530:intron | 65.0% | |
| CCGGCCCCTACACCCCAGTT+AGG | - | chr7_2:72425511-72425530 | None:intergenic | 70.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr7_2 | gene | 72424336 | 72427588 | 72424336 | ID=Msa1074530;Name=Msa1074530 |
| chr7_2 | mRNA | 72424336 | 72427588 | 72424336 | ID=Msa1074530-mRNA-1;Parent=Msa1074530;Name=Msa1074530-mRNA-1;_AED=0.01;_eAED=0.01;_QI=195|1|1|1|1|1|2|448|279 |
| chr7_2 | exon | 72424336 | 72425178 | 72424336 | ID=Msa1074530-mRNA-1:exon:16657;Parent=Msa1074530-mRNA-1 |
| chr7_2 | exon | 72426949 | 72427588 | 72426949 | ID=Msa1074530-mRNA-1:exon:16658;Parent=Msa1074530-mRNA-1 |
| chr7_2 | five_prime_UTR | 72424336 | 72424530 | 72424336 | ID=Msa1074530-mRNA-1:five_prime_utr;Parent=Msa1074530-mRNA-1 |
| chr7_2 | CDS | 72424531 | 72425178 | 72424531 | ID=Msa1074530-mRNA-1:cds;Parent=Msa1074530-mRNA-1 |
| chr7_2 | CDS | 72426949 | 72427140 | 72426949 | ID=Msa1074530-mRNA-1:cds;Parent=Msa1074530-mRNA-1 |
| chr7_2 | three_prime_UTR | 72427141 | 72427588 | 72427141 | ID=Msa1074530-mRNA-1:three_prime_utr;Parent=Msa1074530-mRNA-1 |
| Gene Sequence |
| Protein sequence |
