AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa1397450


Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa1397450 MtrunA17_Chr2g0332281 97.872 423 9 0 1 423 1 423 0.0 863
Msa1397450 MtrunA17_Chr4g0003891 71.891 402 96 6 23 409 45 444 0.0 570
Msa1397450 MtrunA17_Chr2g0279481 34.519 478 238 8 10 423 219 685 9.70e-82 265
Msa1397450 MtrunA17_Chr4g0050021 37.701 435 211 10 7 384 215 646 3.60e-81 263
Msa1397450 MtrunA17_Chr4g0010091 38.843 363 195 6 25 364 212 570 5.56e-68 227
Msa1397450 MtrunA17_Chr5g0412591 39.677 310 142 5 26 293 183 489 1.09e-64 218
Msa1397450 MtrunA17_Chr2g0285511 33.763 388 229 6 25 392 215 594 2.35e-64 217
Msa1397450 MtrunA17_Chr8g0382231 37.919 298 156 5 25 294 216 512 2.03e-63 215
Msa1397450 MtrunA17_Chr7g0245201 37.995 379 209 9 25 384 237 608 2.30e-63 215
Msa1397450 MtrunA17_Chr2g0303541 35.533 394 204 9 25 378 216 599 1.87e-62 213
Msa1397450 MtrunA17_Chr7g0268781 34.499 429 220 12 30 420 219 624 1.89e-61 209
Msa1397450 MtrunA17_Chr1g0195911 33.738 412 219 12 30 399 216 615 2.04e-59 204
Msa1397450 MtrunA17_Chr1g0207461 35.294 425 208 14 26 407 215 615 3.55e-59 203
Msa1397450 MtrunA17_Chr1g0181181 33.151 365 195 9 25 356 191 539 6.50e-57 196
Msa1397450 MtrunA17_Chr1g0199631 32.105 380 218 7 25 380 177 540 1.74e-56 195
Msa1397450 MtrunA17_Chr1g0150191 40.559 286 138 7 26 292 215 487 1.49e-55 193
Msa1397450 MtrunA17_Chr5g0401341 40.989 283 139 5 26 293 214 483 3.43e-55 193
Msa1397450 MtrunA17_Chr8g0374011 39.527 296 153 4 25 298 228 519 5.42e-55 193
Msa1397450 MtrunA17_Chr5g0401451 36.036 333 186 6 26 340 221 544 3.36e-54 190
Msa1397450 MtrunA17_Chr4g0053841 36.193 373 197 9 26 368 197 558 3.20e-53 187
Msa1397450 MtrunA17_Chr4g0076521 36.364 297 176 4 6 293 183 475 8.88e-51 180
Msa1397450 MtrunA17_Chr3g0108331 31.566 396 231 9 26 404 185 557 2.67e-50 178
Msa1397450 MtrunA17_Chr2g0320691 34.965 286 169 3 25 294 213 497 2.38e-48 174
Msa1397450 MtrunA17_Chr1g0191711 28.198 344 215 7 13 349 210 528 3.02e-46 167
Msa1397450 MtrunA17_Chr8g0367891 34.983 303 143 6 26 293 201 484 1.75e-45 166
Msa1397450 MtrunA17_Chr2g0290741 35.971 278 153 5 26 293 203 465 6.76e-40 150
Msa1397450 MtrunA17_Chr5g0432861 30.070 286 183 2 26 294 186 471 1.20e-39 149
Msa1397450 MtrunA17_Chr4g0023801 33.333 291 161 6 106 372 257 538 4.59e-35 136
Msa1397450 MtrunA17_Chr4g0037661 36.082 194 122 1 101 294 276 467 1.92e-31 125
Msa1397450 MtrunA17_Chr1g0163311 33.508 191 122 2 101 291 272 457 6.66e-29 118
Msa1397450 MtrunA17_Chr2g0280541 27.799 259 170 6 37 294 131 373 4.82e-19 89.0
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa1397450 AT3G15570.1 59.121 455 151 8 1 423 1 452 0.0 514
Msa1397450 AT1G52770.1 58.409 440 154 9 12 423 16 454 2.99e-172 490
Msa1397450 AT5G03250.2 36.605 377 196 9 25 377 108 465 2.97e-66 219
Msa1397450 AT5G03250.1 36.605 377 196 9 25 377 220 577 3.01e-65 219
Msa1397450 AT5G64330.1 38.235 340 149 6 92 374 373 708 3.14e-65 222
Msa1397450 AT5G64330.3 45.957 235 96 2 92 295 314 548 4.84e-61 208
Msa1397450 AT5G13600.1 34.903 361 208 7 25 368 211 561 1.09e-60 207
Msa1397450 AT1G30440.1 34.121 381 208 7 25 366 217 593 1.56e-60 208
Msa1397450 AT5G64330.2 45.957 235 96 2 92 295 373 607 1.62e-60 208
Msa1397450 AT3G08660.3 33.989 356 188 6 26 357 140 472 1.27e-58 200
Msa1397450 AT3G08660.1 34.270 356 187 6 26 357 200 532 4.01e-58 200
Msa1397450 AT5G48800.1 35.696 381 196 8 25 376 222 582 1.76e-57 199
Msa1397450 AT5G66560.3 41.275 298 156 5 25 311 228 517 5.23e-57 198
Msa1397450 AT5G66560.4 41.275 298 156 5 25 311 218 507 5.38e-57 198
Msa1397450 AT1G03010.2 37.222 360 170 11 29 340 185 536 1.00e-56 197
Msa1397450 AT5G66560.1 41.275 298 156 5 25 311 257 546 1.10e-56 198
Msa1397450 AT1G03010.1 37.222 360 170 11 29 340 212 563 2.26e-56 196
Msa1397450 AT5G67385.4 39.068 279 152 5 26 294 160 430 2.33e-56 195
Msa1397450 AT5G67385.5 39.068 279 152 5 26 294 160 430 2.33e-56 195
Msa1397450 AT5G67385.2 39.068 279 152 5 26 294 160 430 2.33e-56 195
Msa1397450 AT5G67385.3 39.068 279 152 5 26 294 160 430 2.33e-56 195
Msa1397450 AT2G47860.5 34.359 390 195 9 30 374 96 469 2.53e-56 194
Msa1397450 AT2G47860.2 34.359 390 195 9 30 374 96 469 2.53e-56 194
Msa1397450 AT1G03010.3 37.326 359 169 11 30 340 212 562 2.62e-56 196
Msa1397450 AT5G67385.1 39.068 279 152 5 26 294 205 475 5.12e-56 195
Msa1397450 AT2G47860.1 34.359 390 195 9 30 374 214 587 2.05e-55 194
Msa1397450 AT2G30520.2 35.905 337 205 3 26 351 143 479 2.21e-55 192
Msa1397450 AT2G30520.3 35.905 337 205 3 26 351 143 479 2.21e-55 192
Msa1397450 AT2G47860.3 34.359 390 195 9 30 374 237 610 2.78e-55 194
Msa1397450 AT2G30520.1 35.905 337 205 3 26 351 191 527 3.99e-55 192
Msa1397450 AT3G26490.1 37.171 304 137 5 26 293 222 507 1.36e-53 188
Msa1397450 AT3G26490.3 37.171 304 137 5 26 293 222 507 1.36e-53 188
Msa1397450 AT3G26490.4 37.171 304 137 5 26 293 222 507 1.36e-53 188
Msa1397450 AT4G31820.2 38.869 283 134 6 26 295 161 417 4.48e-53 185
Msa1397450 AT5G10250.2 32.533 375 219 7 23 370 212 579 4.60e-53 187
Msa1397450 AT4G31820.1 38.869 283 134 6 26 295 214 470 1.49e-52 185
Msa1397450 AT5G10250.1 32.329 365 218 7 23 370 212 564 1.05e-51 183
Msa1397450 AT2G14820.2 33.607 366 195 7 26 359 211 560 1.62e-50 181
Msa1397450 AT2G14820.1 33.607 366 195 7 26 359 211 560 1.62e-50 181
Msa1397450 AT1G67900.5 36.601 306 156 3 26 293 204 509 8.10e-50 179
Msa1397450 AT1G67900.1 36.601 306 156 3 26 293 204 509 8.10e-50 179
Msa1397450 AT1G67900.3 36.601 306 156 3 26 293 204 509 8.10e-50 179
Msa1397450 AT1G67900.6 36.601 306 156 3 26 293 204 509 8.10e-50 179
Msa1397450 AT1G67900.2 36.601 306 156 3 26 293 204 509 8.10e-50 179
Msa1397450 AT1G67900.4 36.601 306 156 3 26 293 204 509 8.10e-50 179
Msa1397450 AT3G08570.1 31.944 360 211 7 25 359 213 563 1.38e-49 177
Msa1397450 AT3G44820.1 31.099 373 216 7 25 359 214 583 6.77e-48 174
Msa1397450 AT4G37590.1 37.868 272 145 5 26 295 218 467 1.62e-47 171
Msa1397450 AT5G47800.3 34.459 296 180 4 6 291 183 474 8.61e-47 169
Msa1397450 AT5G47800.1 34.459 296 180 4 6 291 183 474 8.61e-47 169
Msa1397450 AT5G47800.4 34.459 296 180 4 6 291 183 474 8.61e-47 169
Msa1397450 AT3G50840.2 33.333 357 226 5 25 381 161 505 3.56e-46 167
Msa1397450 AT3G50840.3 33.333 357 226 5 25 381 161 505 3.56e-46 167
Msa1397450 AT5G47800.2 34.228 298 182 4 4 291 294 587 3.69e-46 169
Msa1397450 AT3G50840.1 33.333 357 226 5 25 381 197 541 6.97e-46 167
Msa1397450 AT2G23050.2 36.531 271 142 6 26 295 95 336 8.76e-45 159
Msa1397450 AT5G67440.2 36.823 277 157 5 26 293 172 439 1.24e-44 163
Msa1397450 AT5G67440.3 36.823 277 157 5 26 293 209 476 2.98e-44 162
Msa1397450 AT5G67440.1 36.823 277 157 5 26 293 209 476 2.98e-44 162
Msa1397450 AT2G23050.1 36.531 271 142 6 26 295 211 452 4.49e-44 160
Msa1397450 AT3G49970.1 33.203 256 154 6 26 278 153 394 4.21e-38 144
Msa1397450 AT3G49970.2 33.203 256 154 6 26 278 153 394 4.21e-38 144
Msa1397450 AT2G47860.6 36.992 246 106 6 30 242 237 466 8.33e-34 132
Msa1397450 AT2G47860.4 36.992 246 106 6 30 242 214 443 1.08e-33 131
Msa1397450 AT5G66560.2 37.991 229 125 4 25 242 257 479 4.28e-33 130
Msa1397450 AT3G26490.2 33.858 254 114 5 26 243 222 457 4.42e-33 130
Msa1397450 AT3G08660.2 32.365 241 130 4 26 250 200 423 7.20e-31 123
Msa1397450 AT3G19850.1 34.896 192 124 1 101 291 272 463 3.40e-29 120
Msa1397450 AT3G03510.1 33.468 248 143 6 51 294 133 362 8.11e-29 117
Msa1397450 AT3G22104.4 35.979 189 115 3 91 278 162 345 2.59e-27 113
Msa1397450 AT3G22104.2 35.979 189 115 3 91 278 162 345 2.59e-27 113
Msa1397450 AT3G22104.3 35.979 189 115 3 91 278 162 345 2.59e-27 113
Msa1397450 AT3G22104.1 35.567 194 119 3 86 278 232 420 3.99e-27 113
Msa1397450 AT1G50280.2 32.275 189 126 1 101 287 239 427 3.36e-25 107
Msa1397450 AT1G50280.1 32.275 189 126 1 101 287 272 460 3.49e-25 108
Msa1397450 AT5G17580.2 30.233 258 158 4 43 294 217 458 2.81e-23 102
Msa1397450 AT5G17580.1 30.233 258 158 4 43 294 202 443 3.39e-23 102
Msa1397450 AT5G48130.1 32.374 139 92 2 191 328 367 504 1.57e-18 88.6

Find 80 sgRNAs with CRISPR-Local

Find 294 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
TGTTGGTTTGGACTTGTTTC+TGG 0.094629 tig0022151:+102811 None:intergenic
CATGATGTTGTTACACTTTC+AGG 0.101878 tig0022151:+102592 None:intergenic
GATGAAGCTGAAACTGAATT+TGG 0.156976 tig0022151:-100608 Msa1397450:CDS
TCTCAGTTTGTTGCACTTGC+TGG 0.262022 tig0022151:-102199 Msa1397450:CDS
TCATACTTGTGGGACCCTTT+TGG 0.268326 tig0022151:-102365 Msa1397450:CDS
AACTCAACCGTTACGTTGAT+TGG 0.275986 tig0022151:-100892 Msa1397450:CDS
AACTGAAGGAAGACGTTTAC+AGG 0.316073 tig0022151:-100757 Msa1397450:CDS
TTACCTTGCTGAAGCTGGTT+TGG 0.320602 tig0022151:-102239 Msa1397450:CDS
TCCAAAGTTACTTGTTGGTT+TGG 0.335510 tig0022151:+102799 None:intergenic
CTTTCAAACATCAAACAAAA+AGG 0.338570 tig0022151:-102718 Msa1397450:CDS
TGGATGTTGAGCTTGTTATT+AGG 0.354204 tig0022151:-102345 Msa1397450:CDS
CTTTCTTGCTTCGACACGCT+TGG 0.365749 tig0022151:+101037 None:intergenic
ATGAAGCTGAAACTGAATTT+GGG 0.381070 tig0022151:-100607 Msa1397450:CDS
AGAAGAAAAGTTTCTTCAAA+TGG 0.382710 tig0022151:-100682 Msa1397450:CDS
TAACTTTGGAATATTGTTGC+CGG 0.401723 tig0022151:-102786 Msa1397450:CDS
AATTTGAATTTGAAGTTTCA+AGG 0.404146 tig0022151:+102635 None:intergenic
AATATTCCAAAGTTACTTGT+TGG 0.406337 tig0022151:+102794 None:intergenic
AGTTAAAACTGGTGCTGCTT+TGG 0.406920 tig0022151:-102287 Msa1397450:CDS
CGAAATGAACACACAACAAA+TGG 0.410203 tig0022151:-100789 Msa1397450:CDS
GGTGTTCGTTCCGATTTAAT+CGG 0.410626 tig0022151:-102697 Msa1397450:CDS
GCTGAAACTGAATTTGGGTT+TGG 0.417674 tig0022151:-100602 Msa1397450:CDS
TTTGGTTAAAGTTGCTAAGT+TGG 0.421971 tig0022151:-102269 Msa1397450:CDS
TTGTTATTAGGTTGGTTAAG+AGG 0.429280 tig0022151:-102333 Msa1397450:CDS
GAATTTGAAGTTTCAAGGTC+AGG 0.429853 tig0022151:+102640 None:intergenic
CATGGAATGGAATCTTTGTC+TGG 0.430911 tig0022151:+102523 None:intergenic
ACGGTTGAGTTTCGTTTGTT+CGG 0.438226 tig0022151:+100904 None:intergenic
GATCATGATGGAGTTAAAAC+TGG 0.446409 tig0022151:-102298 Msa1397450:CDS
TCCAAACCAACAAGTAACTT+TGG 0.448402 tig0022151:-102800 Msa1397450:CDS
CAACATCATGGATGAAGAAA+AGG 0.449234 tig0022151:-102579 Msa1397450:CDS
GCTGCATGAAGTGAGGCTTC+TGG 0.449394 tig0022151:+100974 None:intergenic
ATCTTGAGAATCGAATTTCA+TGG 0.451747 tig0022151:-102435 Msa1397450:CDS
GATTGTTACCTTGCTGAAGC+TGG 0.451910 tig0022151:-102244 Msa1397450:CDS
CTTCTTTCAGTCATACTTGT+GGG 0.454989 tig0022151:-102375 Msa1397450:CDS
TCAGTAGCTCTTGCATGGTT+AGG 0.455773 tig0022151:+102169 None:intergenic
TTCAAGGTCAGGGAGCCATT+TGG 0.459356 tig0022151:+102651 None:intergenic
GATGATGGAACCGATTAAAT+CGG 0.462106 tig0022151:+102687 None:intergenic
TAACAAGCTCAACATCCAAA+AGG 0.463547 tig0022151:+102350 None:intergenic
TGTTGAGCTTGTTATTAGGT+TGG 0.469392 tig0022151:-102341 Msa1397450:CDS
GGATGCATGCATCTTCGAAC+CGG 0.476249 tig0022151:+102767 None:intergenic
CCTTCTTAAAACAGCTAACA+TGG 0.480139 tig0022151:-102485 Msa1397450:CDS
GTGCTTCTTTCAGTAGCTTG+AGG 0.496152 tig0022151:-100868 Msa1397450:CDS
CAATGTCATGCAAGCACAGA+TGG 0.500225 tig0022151:-100720 Msa1397450:CDS
GTTTGGAAGGCAAACACCTA+TGG 0.502755 tig0022151:-100585 Msa1397450:CDS
CTAGTACTGTGGTCAAAAGT+AGG 0.505830 tig0022151:-100553 Msa1397450:CDS
AACAAGCTCAACATCCAAAA+GGG 0.506792 tig0022151:+102351 None:intergenic
AATTTGAAGTTTCAAGGTCA+GGG 0.510124 tig0022151:+102641 None:intergenic
CATGCAAGAGCTACTGATGA+TGG 0.510855 tig0022151:-102163 Msa1397450:CDS
AAACTGAATTTGGGTTTGGA+AGG 0.516582 tig0022151:-100598 Msa1397450:CDS
TTGAGGAGTCCAAGTGGATA+CGG 0.521600 tig0022151:-100851 Msa1397450:CDS
AACACACCACCGTATCCACT+TGG 0.522164 tig0022151:+100842 None:intergenic
TGGTGGAAGAACACTGACTA+AGG 0.524858 tig0022151:+102543 None:intergenic
AAAGTAGGACTCCTCATAAG+TGG 0.528795 tig0022151:-100538 Msa1397450:CDS
TACTTTAAGATAAGTGTCAA+TGG 0.534706 tig0022151:+102129 None:intergenic
GGAAGCATAGTGAGTGATGA+TGG 0.534975 tig0022151:+102672 None:intergenic
AAGGAGGAAGTTGCATGGAA+TGG 0.540539 tig0022151:+102510 None:intergenic
CTGAAAGTGTAACAACATCA+TGG 0.545813 tig0022151:-102591 Msa1397450:CDS
CGGTGGTGTGTTGGACCCAC+AGG 0.552148 tig0022151:-100831 Msa1397450:CDS
TATTAAAAGCATCGGAGAGA+CGG 0.553022 tig0022151:-100645 Msa1397450:CDS
AGATGCATGCATCCTTGACA+TGG 0.556346 tig0022151:-102758 Msa1397450:CDS
TGTGTAGGTTGATTGATAGC+AGG 0.557107 tig0022151:-101006 Msa1397450:CDS
TCACTCACTATGCTTCCAAA+TGG 0.563233 tig0022151:-102666 Msa1397450:CDS
GCAAGCACAGATGGACAAGA+TGG 0.567785 tig0022151:-100711 Msa1397450:CDS
TGAAATTCGATTCTCAAGAT+CGG 0.569341 tig0022151:+102438 None:intergenic
CCTTCTTTCAGTCATACTTG+TGG 0.572660 tig0022151:-102376 Msa1397450:CDS
CATCATCAGTAGCTCTTGCA+TGG 0.574138 tig0022151:+102164 None:intergenic
TTAGAAAGACACCGTGCCTG+TGG 0.583694 tig0022151:+100815 None:intergenic
GGACATGAAAACTAGTACTG+TGG 0.589920 tig0022151:-100564 Msa1397450:CDS
TAATGAAGCAATCCATGTCA+AGG 0.592917 tig0022151:+102746 None:intergenic
ACTTGAATAACAGCTCTCAC+AGG 0.608705 tig0022151:+100935 None:intergenic
CCACAAGTATGACTGAAAGA+AGG 0.608970 tig0022151:+102376 None:intergenic
AAGTGGATACGGTGGTGTGT+TGG 0.620100 tig0022151:-100840 Msa1397450:CDS
TAGAAAGACACCGTGCCTGT+GGG 0.630868 tig0022151:+100816 None:intergenic
TTCATGCAGCTCAAAACGAA+CGG 0.639540 tig0022151:-100961 Msa1397450:CDS
AGGCGAAGGAGGAAGTTGCA+TGG 0.639865 tig0022151:+102505 None:intergenic
GGAATGGAATCTTTGTCTGG+TGG 0.645080 tig0022151:+102526 None:intergenic
CATCCAAACCAGCTTCAGCA+AGG 0.652544 tig0022151:+102236 None:intergenic
GTGTGTTGGACCCACAGGCA+CGG 0.663649 tig0022151:-100826 Msa1397450:CDS
AAGCACTCCAATCAACGTAA+CGG 0.670586 tig0022151:+100885 None:intergenic
AGTAGCTTGAGGAGTCCAAG+TGG 0.684181 tig0022151:-100857 Msa1397450:CDS
AGGAGTCCAAGTGGATACGG+TGG 0.701403 tig0022151:-100848 Msa1397450:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! AATAAATATACATATCTATA+AGG + tig0022151:102049-102068 None:intergenic 10.0%
!! AATAAATATACATATCTATA+AGG + tig0022151:102049-102068 None:intergenic 10.0%
!!! TACTTATTTATTTTTGCAAT+AGG - tig0022151:102290-102309 Msa1397450:CDS 15.0%
!!! TACTTATTTATTTTTGCAAT+AGG - tig0022151:102290-102309 Msa1397450:CDS 15.0%
!!! TTTTTGTTTGATGTTTGAAA+GGG + tig0022151:100638-100657 None:intergenic 20.0%
!!! AATTTGAATTTGAAGTTTCA+AGG + tig0022151:100723-100742 None:intergenic 20.0%
!! AGAAAGAAATAAGTATTAAG+AGG - tig0022151:101397-101416 Msa1397450:intron 20.0%
!!! TATACTTGTAAAGTCAATTT+TGG + tig0022151:101765-101784 None:intergenic 20.0%
!!! ATTGTTTGTTTTTCATCTAA+AGG - tig0022151:101798-101817 Msa1397450:intron 20.0%
!! AATATACATATCTATAAGGA+AGG + tig0022151:102045-102064 None:intergenic 20.0%
!!! AAGAAAATTAATGTGCTTTT+TGG + tig0022151:102080-102099 None:intergenic 20.0%
!!! TTTTTGTTTGATGTTTGAAA+GGG + tig0022151:100638-100657 None:intergenic 20.0%
!!! AATTTGAATTTGAAGTTTCA+AGG + tig0022151:100723-100742 None:intergenic 20.0%
!! AGAAAGAAATAAGTATTAAG+AGG - tig0022151:101397-101416 Msa1397450:intron 20.0%
!!! TATACTTGTAAAGTCAATTT+TGG + tig0022151:101765-101784 None:intergenic 20.0%
!!! ATTGTTTGTTTTTCATCTAA+AGG - tig0022151:101798-101817 Msa1397450:intron 20.0%
!! AATATACATATCTATAAGGA+AGG + tig0022151:102045-102064 None:intergenic 20.0%
!!! AAGAAAATTAATGTGCTTTT+TGG + tig0022151:102080-102099 None:intergenic 20.0%
! AATATTCCAAAGTTACTTGT+TGG + tig0022151:100564-100583 None:intergenic 25.0%
!!! CTTTTTGTTTGATGTTTGAA+AGG + tig0022151:100639-100658 None:intergenic 25.0%
! CTTTCAAACATCAAACAAAA+AGG - tig0022151:100637-100656 Msa1397450:CDS 25.0%
!!! TACTTTAAGATAAGTGTCAA+TGG + tig0022151:101229-101248 None:intergenic 25.0%
!! TAATTCTTTCTAAAGATCTC+AGG - tig0022151:101282-101301 Msa1397450:intron 25.0%
! AAGAAATAAGTATTAAGAGG+AGG - tig0022151:101400-101419 Msa1397450:intron 25.0%
!!! TATCTAGATTTGGAATTTTG+TGG + tig0022151:101845-101864 None:intergenic 25.0%
! ACAAAATTCCAAATCTAGAT+AGG - tig0022151:101844-101863 Msa1397450:intron 25.0%
! ATTCAAGTAACATACCATTA+AGG - tig0022151:102104-102123 Msa1397450:intron 25.0%
! AATGGAGATAAAAAAACTGA+AGG - tig0022151:102584-102603 Msa1397450:CDS 25.0%
! AGAAGAAAAGTTTCTTCAAA+TGG - tig0022151:102673-102692 Msa1397450:CDS 25.0%
!!! CTTGCTTTTATTAAAAGCAT+CGG - tig0022151:102702-102721 Msa1397450:CDS 25.0%
! AATATTCCAAAGTTACTTGT+TGG + tig0022151:100564-100583 None:intergenic 25.0%
!!! CTTTTTGTTTGATGTTTGAA+AGG + tig0022151:100639-100658 None:intergenic 25.0%
! CTTTCAAACATCAAACAAAA+AGG - tig0022151:100637-100656 Msa1397450:CDS 25.0%
!!! TACTTTAAGATAAGTGTCAA+TGG + tig0022151:101229-101248 None:intergenic 25.0%
!! TAATTCTTTCTAAAGATCTC+AGG - tig0022151:101282-101301 Msa1397450:intron 25.0%
! AAGAAATAAGTATTAAGAGG+AGG - tig0022151:101400-101419 Msa1397450:intron 25.0%
!!! TATCTAGATTTGGAATTTTG+TGG + tig0022151:101845-101864 None:intergenic 25.0%
! ACAAAATTCCAAATCTAGAT+AGG - tig0022151:101844-101863 Msa1397450:intron 25.0%
! ATTCAAGTAACATACCATTA+AGG - tig0022151:102104-102123 Msa1397450:intron 25.0%
! AATGGAGATAAAAAAACTGA+AGG - tig0022151:102584-102603 Msa1397450:CDS 25.0%
! AGAAGAAAAGTTTCTTCAAA+TGG - tig0022151:102673-102692 Msa1397450:CDS 25.0%
!!! CTTGCTTTTATTAAAAGCAT+CGG - tig0022151:102702-102721 Msa1397450:CDS 25.0%
!! TAACTTTGGAATATTGTTGC+CGG - tig0022151:100569-100588 Msa1397450:CDS 30.0%
! AATTTGAAGTTTCAAGGTCA+GGG + tig0022151:100717-100736 None:intergenic 30.0%
TGAAATTCGATTCTCAAGAT+CGG + tig0022151:100920-100939 None:intergenic 30.0%
ATCTTGAGAATCGAATTTCA+TGG - tig0022151:100920-100939 Msa1397450:CDS 30.0%
!! TTGTTATTAGGTTGGTTAAG+AGG - tig0022151:101022-101041 Msa1397450:CDS 30.0%
!!! TTTTTGAGTTTGGATCATGA+TGG - tig0022151:101045-101064 Msa1397450:CDS 30.0%
TTTGGTTAAAGTTGCTAAGT+TGG - tig0022151:101086-101105 Msa1397450:intron 30.0%
! CCACACAAGAAACATTTTAT+AGG + tig0022151:101441-101460 None:intergenic 30.0%
CCTATAAAATGTTTCTTGTG+TGG - tig0022151:101438-101457 Msa1397450:intron 30.0%
!! AAAGTCAATTTTGGTGAAGT+CGG + tig0022151:101756-101775 None:intergenic 30.0%
ATGATCCATTTCAGTAAAAC+AGG + tig0022151:101960-101979 None:intergenic 30.0%
CTAATATAGATGTCAAAGCT+TGG - tig0022151:102014-102033 Msa1397450:intron 30.0%
AAGTAACATACCATTAAGGT+TGG - tig0022151:102108-102127 Msa1397450:intron 30.0%
ATTATTGGATCAAGATCAGA+TGG + tig0022151:102181-102200 None:intergenic 30.0%
AAGAAAGAAAAAGTCTGTGT+AGG - tig0022151:102334-102353 Msa1397450:CDS 30.0%
ATGAAGCTGAAACTGAATTT+GGG - tig0022151:102748-102767 Msa1397450:CDS 30.0%
!! TAACTTTGGAATATTGTTGC+CGG - tig0022151:100569-100588 Msa1397450:CDS 30.0%
! AATTTGAAGTTTCAAGGTCA+GGG + tig0022151:100717-100736 None:intergenic 30.0%
TGAAATTCGATTCTCAAGAT+CGG + tig0022151:100920-100939 None:intergenic 30.0%
ATCTTGAGAATCGAATTTCA+TGG - tig0022151:100920-100939 Msa1397450:CDS 30.0%
!! TTGTTATTAGGTTGGTTAAG+AGG - tig0022151:101022-101041 Msa1397450:CDS 30.0%
!!! TTTTTGAGTTTGGATCATGA+TGG - tig0022151:101045-101064 Msa1397450:CDS 30.0%
TTTGGTTAAAGTTGCTAAGT+TGG - tig0022151:101086-101105 Msa1397450:intron 30.0%
! CCACACAAGAAACATTTTAT+AGG + tig0022151:101441-101460 None:intergenic 30.0%
CCTATAAAATGTTTCTTGTG+TGG - tig0022151:101438-101457 Msa1397450:intron 30.0%
!! AAAGTCAATTTTGGTGAAGT+CGG + tig0022151:101756-101775 None:intergenic 30.0%
ATGATCCATTTCAGTAAAAC+AGG + tig0022151:101960-101979 None:intergenic 30.0%
CTAATATAGATGTCAAAGCT+TGG - tig0022151:102014-102033 Msa1397450:intron 30.0%
AAGTAACATACCATTAAGGT+TGG - tig0022151:102108-102127 Msa1397450:intron 30.0%
ATTATTGGATCAAGATCAGA+TGG + tig0022151:102181-102200 None:intergenic 30.0%
AAGAAAGAAAAAGTCTGTGT+AGG - tig0022151:102334-102353 Msa1397450:CDS 30.0%
ATGAAGCTGAAACTGAATTT+GGG - tig0022151:102748-102767 Msa1397450:CDS 30.0%
TCCAAACCAACAAGTAACTT+TGG - tig0022151:100555-100574 Msa1397450:CDS 35.0%
! TCCAAAGTTACTTGTTGGTT+TGG + tig0022151:100559-100578 None:intergenic 35.0%
TAATGAAGCAATCCATGTCA+AGG + tig0022151:100612-100631 None:intergenic 35.0%
!! GATGATGGAACCGATTAAAT+CGG + tig0022151:100671-100690 None:intergenic 35.0%
! GAATTTGAAGTTTCAAGGTC+AGG + tig0022151:100718-100737 None:intergenic 35.0%
CATGATGTTGTTACACTTTC+AGG + tig0022151:100766-100785 None:intergenic 35.0%
! CTGAAAGTGTAACAACATCA+TGG - tig0022151:100764-100783 Msa1397450:CDS 35.0%
CAACATCATGGATGAAGAAA+AGG - tig0022151:100776-100795 Msa1397450:CDS 35.0%
!!! CCATGTTAGCTGTTTTAAGA+AGG + tig0022151:100873-100892 None:intergenic 35.0%
CCTTCTTAAAACAGCTAACA+TGG - tig0022151:100870-100889 Msa1397450:CDS 35.0%
CTTCTTTCAGTCATACTTGT+GGG - tig0022151:100980-100999 Msa1397450:CDS 35.0%
AACAAGCTCAACATCCAAAA+GGG + tig0022151:101007-101026 None:intergenic 35.0%
TAACAAGCTCAACATCCAAA+AGG + tig0022151:101008-101027 None:intergenic 35.0%
!! TGGATGTTGAGCTTGTTATT+AGG - tig0022151:101010-101029 Msa1397450:CDS 35.0%
!! TGTTGAGCTTGTTATTAGGT+TGG - tig0022151:101014-101033 Msa1397450:CDS 35.0%
!!! GGTTAAGAGGTTTTTGAGTT+TGG - tig0022151:101035-101054 Msa1397450:CDS 35.0%
! GATCATGATGGAGTTAAAAC+TGG - tig0022151:101057-101076 Msa1397450:intron 35.0%
AATGTTTCTTGTGTGGTGAT+TGG - tig0022151:101445-101464 Msa1397450:intron 35.0%
ACTCTCTGATATACGTTTGT+TGG - tig0022151:101481-101500 Msa1397450:intron 35.0%
! TGATATACGTTTGTTGGACT+TGG - tig0022151:101487-101506 Msa1397450:intron 35.0%
TGTGTGACTTTCTAACTAGA+AGG + tig0022151:101516-101535 None:intergenic 35.0%
ATTGTTTCATGTGTGTTCAC+CGG - tig0022151:101628-101647 Msa1397450:intron 35.0%
ACTCACATATATGCGTTTGT+AGG - tig0022151:101657-101676 Msa1397450:intron 35.0%
AATCAAGAGATATCGTTCGT+CGG - tig0022151:101703-101722 Msa1397450:intron 35.0%
!! AAGTCAATTTTGGTGAAGTC+GGG + tig0022151:101755-101774 None:intergenic 35.0%
TTCCAAATCTAGATAGGACA+TGG - tig0022151:101850-101869 Msa1397450:intron 35.0%
! TGTTGATTGCAACTAGCTAT+TGG + tig0022151:101877-101896 None:intergenic 35.0%
GCAATCAACATTTCTCTACA+TGG - tig0022151:101887-101906 Msa1397450:intron 35.0%
TGCATGCATCAGTATATATG+TGG + tig0022151:101925-101944 None:intergenic 35.0%
! ATGTGCCTGTTTTACTGAAA+TGG - tig0022151:101952-101971 Msa1397450:intron 35.0%
TAACATACCATTAAGGTTGG+AGG - tig0022151:102111-102130 Msa1397450:intron 35.0%
!! GATGGTCCATATTTTAAGCT+CGG + tig0022151:102163-102182 None:intergenic 35.0%
GTCAAGACATCGGTAATTAT+TGG + tig0022151:102196-102215 None:intergenic 35.0%
ATTCCATTCAGTCAAGACAT+CGG + tig0022151:102206-102225 None:intergenic 35.0%
AGATTTAGATTGCATGCTGT+TGG + tig0022151:102230-102249 None:intergenic 35.0%
CGAAATGAACACACAACAAA+TGG - tig0022151:102566-102585 Msa1397450:CDS 35.0%
!! TATTAAAAGCATCGGAGAGA+CGG - tig0022151:102710-102729 Msa1397450:CDS 35.0%
GATGAAGCTGAAACTGAATT+TGG - tig0022151:102747-102766 Msa1397450:CDS 35.0%
! AAACTGAATTTGGGTTTGGA+AGG - tig0022151:102757-102776 Msa1397450:CDS 35.0%
!!! GTACTAGTTTTCATGTCCAT+AGG + tig0022151:102789-102808 None:intergenic 35.0%
! AGAGATTTTCTCCACTTATG+AGG + tig0022151:102831-102850 None:intergenic 35.0%
TCCAAACCAACAAGTAACTT+TGG - tig0022151:100555-100574 Msa1397450:CDS 35.0%
! TCCAAAGTTACTTGTTGGTT+TGG + tig0022151:100559-100578 None:intergenic 35.0%
TAATGAAGCAATCCATGTCA+AGG + tig0022151:100612-100631 None:intergenic 35.0%
!! GATGATGGAACCGATTAAAT+CGG + tig0022151:100671-100690 None:intergenic 35.0%
! GAATTTGAAGTTTCAAGGTC+AGG + tig0022151:100718-100737 None:intergenic 35.0%
CATGATGTTGTTACACTTTC+AGG + tig0022151:100766-100785 None:intergenic 35.0%
! CTGAAAGTGTAACAACATCA+TGG - tig0022151:100764-100783 Msa1397450:CDS 35.0%
CAACATCATGGATGAAGAAA+AGG - tig0022151:100776-100795 Msa1397450:CDS 35.0%
!!! CCATGTTAGCTGTTTTAAGA+AGG + tig0022151:100873-100892 None:intergenic 35.0%
CCTTCTTAAAACAGCTAACA+TGG - tig0022151:100870-100889 Msa1397450:CDS 35.0%
CTTCTTTCAGTCATACTTGT+GGG - tig0022151:100980-100999 Msa1397450:CDS 35.0%
AACAAGCTCAACATCCAAAA+GGG + tig0022151:101007-101026 None:intergenic 35.0%
TAACAAGCTCAACATCCAAA+AGG + tig0022151:101008-101027 None:intergenic 35.0%
!! TGGATGTTGAGCTTGTTATT+AGG - tig0022151:101010-101029 Msa1397450:CDS 35.0%
!! TGTTGAGCTTGTTATTAGGT+TGG - tig0022151:101014-101033 Msa1397450:CDS 35.0%
!!! GGTTAAGAGGTTTTTGAGTT+TGG - tig0022151:101035-101054 Msa1397450:CDS 35.0%
! GATCATGATGGAGTTAAAAC+TGG - tig0022151:101057-101076 Msa1397450:intron 35.0%
AATGTTTCTTGTGTGGTGAT+TGG - tig0022151:101445-101464 Msa1397450:intron 35.0%
ACTCTCTGATATACGTTTGT+TGG - tig0022151:101481-101500 Msa1397450:intron 35.0%
! TGATATACGTTTGTTGGACT+TGG - tig0022151:101487-101506 Msa1397450:intron 35.0%
TGTGTGACTTTCTAACTAGA+AGG + tig0022151:101516-101535 None:intergenic 35.0%
ATTGTTTCATGTGTGTTCAC+CGG - tig0022151:101628-101647 Msa1397450:intron 35.0%
ACTCACATATATGCGTTTGT+AGG - tig0022151:101657-101676 Msa1397450:intron 35.0%
AATCAAGAGATATCGTTCGT+CGG - tig0022151:101703-101722 Msa1397450:intron 35.0%
!! AAGTCAATTTTGGTGAAGTC+GGG + tig0022151:101755-101774 None:intergenic 35.0%
TTCCAAATCTAGATAGGACA+TGG - tig0022151:101850-101869 Msa1397450:intron 35.0%
! TGTTGATTGCAACTAGCTAT+TGG + tig0022151:101877-101896 None:intergenic 35.0%
GCAATCAACATTTCTCTACA+TGG - tig0022151:101887-101906 Msa1397450:intron 35.0%
TGCATGCATCAGTATATATG+TGG + tig0022151:101925-101944 None:intergenic 35.0%
! ATGTGCCTGTTTTACTGAAA+TGG - tig0022151:101952-101971 Msa1397450:intron 35.0%
TAACATACCATTAAGGTTGG+AGG - tig0022151:102111-102130 Msa1397450:intron 35.0%
!! GATGGTCCATATTTTAAGCT+CGG + tig0022151:102163-102182 None:intergenic 35.0%
GTCAAGACATCGGTAATTAT+TGG + tig0022151:102196-102215 None:intergenic 35.0%
ATTCCATTCAGTCAAGACAT+CGG + tig0022151:102206-102225 None:intergenic 35.0%
AGATTTAGATTGCATGCTGT+TGG + tig0022151:102230-102249 None:intergenic 35.0%
CGAAATGAACACACAACAAA+TGG - tig0022151:102566-102585 Msa1397450:CDS 35.0%
!! TATTAAAAGCATCGGAGAGA+CGG - tig0022151:102710-102729 Msa1397450:CDS 35.0%
GATGAAGCTGAAACTGAATT+TGG - tig0022151:102747-102766 Msa1397450:CDS 35.0%
! AAACTGAATTTGGGTTTGGA+AGG - tig0022151:102757-102776 Msa1397450:CDS 35.0%
!!! GTACTAGTTTTCATGTCCAT+AGG + tig0022151:102789-102808 None:intergenic 35.0%
! AGAGATTTTCTCCACTTATG+AGG + tig0022151:102831-102850 None:intergenic 35.0%
!! TGTTGGTTTGGACTTGTTTC+TGG + tig0022151:100547-100566 None:intergenic 40.0%
GGTGTTCGTTCCGATTTAAT+CGG - tig0022151:100658-100677 Msa1397450:CDS 40.0%
TCACTCACTATGCTTCCAAA+TGG - tig0022151:100689-100708 Msa1397450:CDS 40.0%
CATGGAATGGAATCTTTGTC+TGG + tig0022151:100835-100854 None:intergenic 40.0%
!!! TAGCTGTTTTAAGAAGGCGA+AGG + tig0022151:100867-100886 None:intergenic 40.0%
CCACAAGTATGACTGAAAGA+AGG + tig0022151:100982-101001 None:intergenic 40.0%
CCTTCTTTCAGTCATACTTG+TGG - tig0022151:100979-100998 Msa1397450:CDS 40.0%
!! AGTTAAAACTGGTGCTGCTT+TGG - tig0022151:101068-101087 Msa1397450:intron 40.0%
ATCTCAGGTTCAATTCTTCC+CGG - tig0022151:101297-101316 Msa1397450:intron 40.0%
TAGTCCACTGAAATTGACAC+CGG + tig0022151:101319-101338 None:intergenic 40.0%
!! TGGACTAGTTTGACGACTTA+AGG - tig0022151:101332-101351 Msa1397450:intron 40.0%
!! GGACTAGTTTGACGACTTAA+GGG - tig0022151:101333-101352 Msa1397450:intron 40.0%
TATATCAGAGAGTCTCATGC+TGG + tig0022151:101474-101493 None:intergenic 40.0%
ACCGTTAGATTGACGAAGAT+CGG - tig0022151:101550-101569 Msa1397450:intron 40.0%
TCCGATCTTCGTCAATCTAA+CGG + tig0022151:101554-101573 None:intergenic 40.0%
CATATATGTGAGTCTCATGC+CGG + tig0022151:101650-101669 None:intergenic 40.0%
ATCTCTTGATTGCGTGACTA+CGG + tig0022151:101694-101713 None:intergenic 40.0%
TTCGTCGGATTGACAAAGAT+CGG - tig0022151:101718-101737 Msa1397450:intron 40.0%
GTCCATGTCCTATCTAGATT+TGG + tig0022151:101855-101874 None:intergenic 40.0%
GCTCTACCGAGCTTAAAATA+TGG - tig0022151:102154-102173 Msa1397450:CDS 40.0%
TTACCGATGTCTTGACTGAA+TGG - tig0022151:102200-102219 Msa1397450:CDS 40.0%
!! TGTGTAGGTTGATTGATAGC+AGG - tig0022151:102349-102368 Msa1397450:CDS 40.0%
TTCATGCAGCTCAAAACGAA+CGG - tig0022151:102394-102413 Msa1397450:CDS 40.0%
ACTTGAATAACAGCTCTCAC+AGG + tig0022151:102423-102442 None:intergenic 40.0%
ACGGTTGAGTTTCGTTTGTT+CGG + tig0022151:102454-102473 None:intergenic 40.0%
AACTCAACCGTTACGTTGAT+TGG - tig0022151:102463-102482 Msa1397450:CDS 40.0%
AAGCACTCCAATCAACGTAA+CGG + tig0022151:102473-102492 None:intergenic 40.0%
AACTGAAGGAAGACGTTTAC+AGG - tig0022151:102598-102617 Msa1397450:CDS 40.0%
! GCTGAAACTGAATTTGGGTT+TGG - tig0022151:102753-102772 Msa1397450:CDS 40.0%
GGACATGAAAACTAGTACTG+TGG - tig0022151:102791-102810 Msa1397450:CDS 40.0%
CTAGTACTGTGGTCAAAAGT+AGG - tig0022151:102802-102821 Msa1397450:CDS 40.0%
AAAGTAGGACTCCTCATAAG+TGG - tig0022151:102817-102836 Msa1397450:CDS 40.0%
!! TGTTGGTTTGGACTTGTTTC+TGG + tig0022151:100547-100566 None:intergenic 40.0%
GGTGTTCGTTCCGATTTAAT+CGG - tig0022151:100658-100677 Msa1397450:CDS 40.0%
TCACTCACTATGCTTCCAAA+TGG - tig0022151:100689-100708 Msa1397450:CDS 40.0%
CATGGAATGGAATCTTTGTC+TGG + tig0022151:100835-100854 None:intergenic 40.0%
!!! TAGCTGTTTTAAGAAGGCGA+AGG + tig0022151:100867-100886 None:intergenic 40.0%
CCACAAGTATGACTGAAAGA+AGG + tig0022151:100982-101001 None:intergenic 40.0%
CCTTCTTTCAGTCATACTTG+TGG - tig0022151:100979-100998 Msa1397450:CDS 40.0%
!! AGTTAAAACTGGTGCTGCTT+TGG - tig0022151:101068-101087 Msa1397450:intron 40.0%
ATCTCAGGTTCAATTCTTCC+CGG - tig0022151:101297-101316 Msa1397450:intron 40.0%
TAGTCCACTGAAATTGACAC+CGG + tig0022151:101319-101338 None:intergenic 40.0%
!! TGGACTAGTTTGACGACTTA+AGG - tig0022151:101332-101351 Msa1397450:intron 40.0%
!! GGACTAGTTTGACGACTTAA+GGG - tig0022151:101333-101352 Msa1397450:intron 40.0%
TATATCAGAGAGTCTCATGC+TGG + tig0022151:101474-101493 None:intergenic 40.0%
ACCGTTAGATTGACGAAGAT+CGG - tig0022151:101550-101569 Msa1397450:intron 40.0%
TCCGATCTTCGTCAATCTAA+CGG + tig0022151:101554-101573 None:intergenic 40.0%
CATATATGTGAGTCTCATGC+CGG + tig0022151:101650-101669 None:intergenic 40.0%
ATCTCTTGATTGCGTGACTA+CGG + tig0022151:101694-101713 None:intergenic 40.0%
TTCGTCGGATTGACAAAGAT+CGG - tig0022151:101718-101737 Msa1397450:intron 40.0%
GTCCATGTCCTATCTAGATT+TGG + tig0022151:101855-101874 None:intergenic 40.0%
GCTCTACCGAGCTTAAAATA+TGG - tig0022151:102154-102173 Msa1397450:CDS 40.0%
TTACCGATGTCTTGACTGAA+TGG - tig0022151:102200-102219 Msa1397450:CDS 40.0%
!! TGTGTAGGTTGATTGATAGC+AGG - tig0022151:102349-102368 Msa1397450:CDS 40.0%
TTCATGCAGCTCAAAACGAA+CGG - tig0022151:102394-102413 Msa1397450:CDS 40.0%
ACTTGAATAACAGCTCTCAC+AGG + tig0022151:102423-102442 None:intergenic 40.0%
ACGGTTGAGTTTCGTTTGTT+CGG + tig0022151:102454-102473 None:intergenic 40.0%
AACTCAACCGTTACGTTGAT+TGG - tig0022151:102463-102482 Msa1397450:CDS 40.0%
AAGCACTCCAATCAACGTAA+CGG + tig0022151:102473-102492 None:intergenic 40.0%
AACTGAAGGAAGACGTTTAC+AGG - tig0022151:102598-102617 Msa1397450:CDS 40.0%
! GCTGAAACTGAATTTGGGTT+TGG - tig0022151:102753-102772 Msa1397450:CDS 40.0%
GGACATGAAAACTAGTACTG+TGG - tig0022151:102791-102810 Msa1397450:CDS 40.0%
CTAGTACTGTGGTCAAAAGT+AGG - tig0022151:102802-102821 Msa1397450:CDS 40.0%
AAAGTAGGACTCCTCATAAG+TGG - tig0022151:102817-102836 Msa1397450:CDS 40.0%
AGATGCATGCATCCTTGACA+TGG - tig0022151:100597-100616 Msa1397450:CDS 45.0%
! GGAAGCATAGTGAGTGATGA+TGG + tig0022151:100686-100705 None:intergenic 45.0%
! TGGTGGAAGAACACTGACTA+AGG + tig0022151:100815-100834 None:intergenic 45.0%
GGAATGGAATCTTTGTCTGG+TGG + tig0022151:100832-100851 None:intergenic 45.0%
AAGGAGGAAGTTGCATGGAA+TGG + tig0022151:100848-100867 None:intergenic 45.0%
!!! CTGTTTTAAGAAGGCGAAGG+AGG + tig0022151:100864-100883 None:intergenic 45.0%
! TCATACTTGTGGGACCCTTT+TGG - tig0022151:100990-101009 Msa1397450:CDS 45.0%
GATTGTTACCTTGCTGAAGC+TGG - tig0022151:101111-101130 Msa1397450:intron 45.0%
TTACCTTGCTGAAGCTGGTT+TGG - tig0022151:101116-101135 Msa1397450:intron 45.0%
!! TCTCAGTTTGTTGCACTTGC+TGG - tig0022151:101156-101175 Msa1397450:intron 45.0%
TCAGTAGCTCTTGCATGGTT+AGG + tig0022151:101189-101208 None:intergenic 45.0%
CATCATCAGTAGCTCTTGCA+TGG + tig0022151:101194-101213 None:intergenic 45.0%
CATGCAAGAGCTACTGATGA+TGG - tig0022151:101192-101211 Msa1397450:intron 45.0%
AGTCCACTGAAATTGACACC+GGG + tig0022151:101318-101337 None:intergenic 45.0%
TCTCTTGATTGCGTGACTAC+GGG + tig0022151:101693-101712 None:intergenic 45.0%
ACTAGCTCCTCCAACCTTAA+TGG + tig0022151:102121-102140 None:intergenic 45.0%
!! GTTTTGAGCTGCATGAAGTG+AGG + tig0022151:102391-102410 None:intergenic 45.0%
GTGCTTCTTTCAGTAGCTTG+AGG - tig0022151:102487-102506 Msa1397450:CDS 45.0%
TTGAGGAGTCCAAGTGGATA+CGG - tig0022151:102504-102523 Msa1397450:CDS 45.0%
CAATGTCATGCAAGCACAGA+TGG - tig0022151:102635-102654 Msa1397450:CDS 45.0%
GTTTGGAAGGCAAACACCTA+TGG - tig0022151:102770-102789 Msa1397450:CDS 45.0%
AGATGCATGCATCCTTGACA+TGG - tig0022151:100597-100616 Msa1397450:CDS 45.0%
! GGAAGCATAGTGAGTGATGA+TGG + tig0022151:100686-100705 None:intergenic 45.0%
! TGGTGGAAGAACACTGACTA+AGG + tig0022151:100815-100834 None:intergenic 45.0%
GGAATGGAATCTTTGTCTGG+TGG + tig0022151:100832-100851 None:intergenic 45.0%
AAGGAGGAAGTTGCATGGAA+TGG + tig0022151:100848-100867 None:intergenic 45.0%
!!! CTGTTTTAAGAAGGCGAAGG+AGG + tig0022151:100864-100883 None:intergenic 45.0%
! TCATACTTGTGGGACCCTTT+TGG - tig0022151:100990-101009 Msa1397450:CDS 45.0%
GATTGTTACCTTGCTGAAGC+TGG - tig0022151:101111-101130 Msa1397450:intron 45.0%
TTACCTTGCTGAAGCTGGTT+TGG - tig0022151:101116-101135 Msa1397450:intron 45.0%
!! TCTCAGTTTGTTGCACTTGC+TGG - tig0022151:101156-101175 Msa1397450:intron 45.0%
TCAGTAGCTCTTGCATGGTT+AGG + tig0022151:101189-101208 None:intergenic 45.0%
CATCATCAGTAGCTCTTGCA+TGG + tig0022151:101194-101213 None:intergenic 45.0%
CATGCAAGAGCTACTGATGA+TGG - tig0022151:101192-101211 Msa1397450:intron 45.0%
AGTCCACTGAAATTGACACC+GGG + tig0022151:101318-101337 None:intergenic 45.0%
TCTCTTGATTGCGTGACTAC+GGG + tig0022151:101693-101712 None:intergenic 45.0%
ACTAGCTCCTCCAACCTTAA+TGG + tig0022151:102121-102140 None:intergenic 45.0%
!! GTTTTGAGCTGCATGAAGTG+AGG + tig0022151:102391-102410 None:intergenic 45.0%
GTGCTTCTTTCAGTAGCTTG+AGG - tig0022151:102487-102506 Msa1397450:CDS 45.0%
TTGAGGAGTCCAAGTGGATA+CGG - tig0022151:102504-102523 Msa1397450:CDS 45.0%
CAATGTCATGCAAGCACAGA+TGG - tig0022151:102635-102654 Msa1397450:CDS 45.0%
GTTTGGAAGGCAAACACCTA+TGG - tig0022151:102770-102789 Msa1397450:CDS 45.0%
GGATGCATGCATCTTCGAAC+CGG + tig0022151:100591-100610 None:intergenic 50.0%
TTCAAGGTCAGGGAGCCATT+TGG + tig0022151:100707-100726 None:intergenic 50.0%
CATCCAAACCAGCTTCAGCA+AGG + tig0022151:101122-101141 None:intergenic 50.0%
! CTTCCCGGTGTCAATTTCAG+TGG - tig0022151:101312-101331 Msa1397450:intron 50.0%
CTTTCTTGCTTCGACACGCT+TGG + tig0022151:102321-102340 None:intergenic 50.0%
AGTAGCTTGAGGAGTCCAAG+TGG - tig0022151:102498-102517 Msa1397450:CDS 50.0%
AACACACCACCGTATCCACT+TGG + tig0022151:102516-102535 None:intergenic 50.0%
AAGTGGATACGGTGGTGTGT+TGG - tig0022151:102515-102534 Msa1397450:CDS 50.0%
TAGAAAGACACCGTGCCTGT+GGG + tig0022151:102542-102561 None:intergenic 50.0%
TTAGAAAGACACCGTGCCTG+TGG + tig0022151:102543-102562 None:intergenic 50.0%
GCAAGCACAGATGGACAAGA+TGG - tig0022151:102644-102663 Msa1397450:CDS 50.0%
GGATGCATGCATCTTCGAAC+CGG + tig0022151:100591-100610 None:intergenic 50.0%
TTCAAGGTCAGGGAGCCATT+TGG + tig0022151:100707-100726 None:intergenic 50.0%
CATCCAAACCAGCTTCAGCA+AGG + tig0022151:101122-101141 None:intergenic 50.0%
! CTTCCCGGTGTCAATTTCAG+TGG - tig0022151:101312-101331 Msa1397450:intron 50.0%
CTTTCTTGCTTCGACACGCT+TGG + tig0022151:102321-102340 None:intergenic 50.0%
AGTAGCTTGAGGAGTCCAAG+TGG - tig0022151:102498-102517 Msa1397450:CDS 50.0%
AACACACCACCGTATCCACT+TGG + tig0022151:102516-102535 None:intergenic 50.0%
AAGTGGATACGGTGGTGTGT+TGG - tig0022151:102515-102534 Msa1397450:CDS 50.0%
TAGAAAGACACCGTGCCTGT+GGG + tig0022151:102542-102561 None:intergenic 50.0%
TTAGAAAGACACCGTGCCTG+TGG + tig0022151:102543-102562 None:intergenic 50.0%
GCAAGCACAGATGGACAAGA+TGG - tig0022151:102644-102663 Msa1397450:CDS 50.0%
AGGCGAAGGAGGAAGTTGCA+TGG + tig0022151:100853-100872 None:intergenic 55.0%
GCTGCATGAAGTGAGGCTTC+TGG + tig0022151:102384-102403 None:intergenic 55.0%
AGGAGTCCAAGTGGATACGG+TGG - tig0022151:102507-102526 Msa1397450:CDS 55.0%
AGGCGAAGGAGGAAGTTGCA+TGG + tig0022151:100853-100872 None:intergenic 55.0%
GCTGCATGAAGTGAGGCTTC+TGG + tig0022151:102384-102403 None:intergenic 55.0%
AGGAGTCCAAGTGGATACGG+TGG - tig0022151:102507-102526 Msa1397450:CDS 55.0%
GTGTGTTGGACCCACAGGCA+CGG - tig0022151:102529-102548 Msa1397450:CDS 60.0%
GTGTGTTGGACCCACAGGCA+CGG - tig0022151:102529-102548 Msa1397450:CDS 60.0%
CGGTGGTGTGTTGGACCCAC+AGG - tig0022151:102524-102543 Msa1397450:CDS 65.0%
CGGTGGTGTGTTGGACCCAC+AGG - tig0022151:102524-102543 Msa1397450:CDS 65.0%
Chromosome Type Strat End Strand Name
tig0022151 gene 100520 102857 100520 ID=Msa1397450;Name=Msa1397450
tig0022151 mRNA 100520 102857 100520 ID=Msa1397450-mRNA-1;Parent=Msa1397450;Name=Msa1397450-mRNA-1;_AED=0.01;_eAED=0.01;_QI=0|0|0|1|1|1|2|0|423
tig0022151 exon 102132 102857 102132 ID=Msa1397450-mRNA-1:exon:16069;Parent=Msa1397450-mRNA-1
tig0022151 exon 100520 101065 100520 ID=Msa1397450-mRNA-1:exon:16068;Parent=Msa1397450-mRNA-1
tig0022151 CDS 102132 102857 102132 ID=Msa1397450-mRNA-1:cds;Parent=Msa1397450-mRNA-1
tig0022151 CDS 100520 101065 100520 ID=Msa1397450-mRNA-1:cds;Parent=Msa1397450-mRNA-1
Gene Sequence

>Msa1397450

ATGAAGAAACAATGTTACAAAGAACCAGAAACAAGTCCAAACCAACAAGTAACTTTGGAATATTGTTGCCGGTTCGAAGATGCATGCATCCTTGACATGGATTGCTTCATTAAGACCCTTTCAAACATCAAACAAAAAGGTGTTCGTTCCGATTTAATCGGTTCCATCATCACTCACTATGCTTCCAAATGGCTCCCTGACCTTGAAACTTCAAATTCAAATTCAAATGCAAATGCGAATTCACCTGAAAGTGTAACAACATCATGGATGAAGAAAAGGTTCTTTGTTGAAACCTTAGTCAGTGTTCTTCCACCAGACAAAGATTCCATTCCATGCAACTTCCTCCTTCGCCTTCTTAAAACAGCTAACATGGTTCTTGTTGAGTCTACTTATCGAACCGATCTTGAGAATCGAATTTCATGGCAGTTAGATCAAGCTTCATTAAAAGAACTCATGATACCTTCTTTCAGTCATACTTGTGGGACCCTTTTGGATGTTGAGCTTGTTATTAGGTTGGTTAAGAGGTTTTTGAGTTTGGATCATGATGGAGTTAAAACTGGTGCTGCTTTGGTTAAAGTTGCTAAGTTGGTTGATTGTTACCTTGCTGAAGCTGGTTTGGATGCTAATTTGAGTTTGTCTCAGTTTGTTGCACTTGCTGGTGCTCTTCCTAACCATGCAAGAGCTACTGATGATGGTTTATATAGAGCCATTGACACTTATCTTAAAGCACATCCAAGCGTGTCGAAGCAAGAAAGAAAAAGTCTGTGTAGGTTGATTGATAGCAGGAAACTCACACCAGAAGCCTCACTTCATGCAGCTCAAAACGAACGGTTGCCTGTGAGAGCTGTTATTCAAGTTCTCTTCTCCGAACAAACGAAACTCAACCGTTACGTTGATTGGAGTGCTTCTTTCAGTAGCTTGAGGAGTCCAAGTGGATACGGTGGTGTGTTGGACCCACAGGCACGGTGTCTTTCTAAGCGCGAAATGAACACACAACAAATGGAGATAAAAAAACTGAAGGAAGACGTTTACAGGCTGCAAAGTCAGTGCAATGTCATGCAAGCACAGATGGACAAGATGGCTGAGAAGAAGAAAAGTTTCTTCAAATGGAAGAAACTTGCTTTTATTAAAAGCATCGGAGAGACGGAGAATGTTGAACAAGATGAAGCTGAAACTGAATTTGGGTTTGGAAGGCAAACACCTATGGACATGAAAACTAGTACTGTGGTCAAAAGTAGGACTCCTCATAAGTGGAGAAAATCTCTGTCCTGA

Protein sequence

>Msa1397450

MKKQCYKEPETSPNQQVTLEYCCRFEDACILDMDCFIKTLSNIKQKGVRSDLIGSIITHYASKWLPDLETSNSNSNANANSPESVTTSWMKKRFFVETLVSVLPPDKDSIPCNFLLRLLKTANMVLVESTYRTDLENRISWQLDQASLKELMIPSFSHTCGTLLDVELVIRLVKRFLSLDHDGVKTGAALVKVAKLVDCYLAEAGLDANLSLSQFVALAGALPNHARATDDGLYRAIDTYLKAHPSVSKQERKSLCRLIDSRKLTPEASLHAAQNERLPVRAVIQVLFSEQTKLNRYVDWSASFSSLRSPSGYGGVLDPQARCLSKREMNTQQMEIKKLKEDVYRLQSQCNVMQAQMDKMAEKKKSFFKWKKLAFIKSIGETENVEQDEAETEFGFGRQTPMDMKTSTVVKSRTPHKWRKSLS*