AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa0341180


Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0341180 MtrunA17_Chr2g0332281 95.012 421 18 2 1 420 1 419 0.0 775
Msa0341180 MtrunA17_Chr4g0003891 69.059 404 105 8 23 410 45 444 0.0 541
Msa0341180 MtrunA17_Chr2g0279481 33.933 445 224 8 10 390 219 657 2.99e-71 237
Msa0341180 MtrunA17_Chr4g0050021 35.550 436 220 11 7 385 215 646 5.46e-71 236
Msa0341180 MtrunA17_Chr4g0010091 36.339 366 203 8 24 365 211 570 1.34e-58 202
Msa0341180 MtrunA17_Chr5g0412591 37.261 314 149 7 24 294 181 489 3.78e-57 198
Msa0341180 MtrunA17_Chr2g0285511 31.714 391 236 8 24 393 214 594 3.96e-55 192
Msa0341180 MtrunA17_Chr7g0245201 35.340 382 218 11 24 385 236 608 9.95e-54 189
Msa0341180 MtrunA17_Chr2g0303541 33.249 397 212 11 24 379 215 599 3.68e-53 188
Msa0341180 MtrunA17_Chr8g0382231 34.551 301 165 7 24 295 215 512 6.62e-53 187
Msa0341180 MtrunA17_Chr7g0268781 32.775 418 224 13 24 402 213 612 3.99e-51 182
Msa0341180 MtrunA17_Chr1g0195911 31.190 420 224 12 24 397 210 610 5.20e-50 179
Msa0341180 MtrunA17_Chr1g0207461 32.867 429 218 16 24 408 213 615 3.63e-49 177
Msa0341180 MtrunA17_Chr1g0199631 30.026 383 225 9 24 381 176 540 6.72e-48 172
Msa0341180 MtrunA17_Chr1g0181181 30.978 368 202 11 24 357 190 539 9.76e-48 172
Msa0341180 MtrunA17_Chr1g0150191 37.931 290 145 9 24 293 213 487 3.45e-47 171
Msa0341180 MtrunA17_Chr8g0374011 37.124 299 159 6 24 299 227 519 3.79e-46 169
Msa0341180 MtrunA17_Chr5g0401341 36.934 287 150 6 24 294 212 483 6.88e-46 167
Msa0341180 MtrunA17_Chr5g0401451 33.828 337 193 8 24 341 219 544 1.17e-45 167
Msa0341180 MtrunA17_Chr4g0076521 34.448 299 180 6 6 294 183 475 2.35e-44 163
Msa0341180 MtrunA17_Chr4g0053841 33.952 377 205 11 24 369 195 558 7.23e-44 162
Msa0341180 MtrunA17_Chr3g0108331 30.000 400 237 11 24 405 183 557 2.47e-43 160
Msa0341180 MtrunA17_Chr2g0320691 32.180 289 176 5 24 295 212 497 8.84e-40 150
Msa0341180 MtrunA17_Chr1g0191711 26.012 346 221 9 13 350 210 528 1.43e-38 146
Msa0341180 MtrunA17_Chr8g0367891 32.353 306 152 7 24 294 199 484 3.14e-38 146
Msa0341180 MtrunA17_Chr2g0290741 34.397 282 157 7 24 294 201 465 9.11e-35 136
Msa0341180 MtrunA17_Chr5g0432861 27.931 290 189 4 24 295 184 471 5.39e-33 131
Msa0341180 MtrunA17_Chr4g0023801 31.741 293 164 8 106 373 257 538 1.40e-28 118
Msa0341180 MtrunA17_Chr4g0037661 34.184 196 124 3 101 295 276 467 3.08e-24 105
Msa0341180 MtrunA17_Chr1g0163311 28.148 270 171 7 24 292 210 457 3.10e-21 96.3
Msa0341180 MtrunA17_Chr2g0280541 25.641 273 181 8 24 295 122 373 7.84e-14 73.2
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0341180 AT3G15570.1 56.512 453 159 10 1 420 1 448 1.22e-167 479
Msa0341180 AT1G52770.1 55.936 438 161 11 12 420 16 450 1.81e-159 458
Msa0341180 AT5G64330.3 35.475 358 144 7 24 296 193 548 3.50e-60 206
Msa0341180 AT5G64330.2 35.475 358 144 7 24 296 252 607 1.02e-59 206
Msa0341180 AT5G03250.2 34.828 379 203 10 24 378 107 465 7.47e-58 197
Msa0341180 AT5G03250.1 35.000 380 201 11 24 378 219 577 8.04e-57 197
Msa0341180 AT5G64330.1 34.473 351 168 7 92 385 373 718 1.18e-53 191
Msa0341180 AT5G13600.1 32.967 364 214 9 24 369 210 561 3.24e-52 185
Msa0341180 AT1G30440.1 31.771 384 216 9 24 367 216 593 2.03e-51 184
Msa0341180 AT3G08660.3 31.944 360 195 8 24 358 138 472 1.03e-49 177
Msa0341180 AT3G08660.1 31.944 360 195 8 24 358 198 532 2.55e-49 177
Msa0341180 AT5G48800.1 33.854 384 202 11 24 377 221 582 1.35e-48 175
Msa0341180 AT5G66560.3 38.141 312 169 8 13 312 218 517 1.64e-48 176
Msa0341180 AT5G66560.4 38.141 312 169 8 13 312 208 507 1.86e-48 175
Msa0341180 AT5G66560.1 38.141 312 169 8 13 312 247 546 2.63e-48 175
Msa0341180 AT3G26490.1 35.714 308 141 7 24 294 220 507 2.87e-48 174
Msa0341180 AT3G26490.3 35.714 308 141 7 24 294 220 507 2.87e-48 174
Msa0341180 AT3G26490.4 35.714 308 141 7 24 294 220 507 2.87e-48 174
Msa0341180 AT2G30520.2 33.724 341 212 5 24 352 141 479 3.84e-48 173
Msa0341180 AT2G30520.3 33.724 341 212 5 24 352 141 479 3.84e-48 173
Msa0341180 AT2G30520.1 33.724 341 212 5 24 352 189 527 7.67e-48 173
Msa0341180 AT5G67385.4 36.396 283 159 7 24 295 158 430 1.94e-47 171
Msa0341180 AT5G67385.5 36.396 283 159 7 24 295 158 430 1.94e-47 171
Msa0341180 AT5G67385.2 36.396 283 159 7 24 295 158 430 1.94e-47 171
Msa0341180 AT5G67385.3 36.396 283 159 7 24 295 158 430 1.94e-47 171
Msa0341180 AT5G67385.1 36.396 283 159 7 24 295 203 475 3.65e-47 171
Msa0341180 AT1G03010.2 34.605 367 181 13 24 341 180 536 4.20e-47 171
Msa0341180 AT1G03010.1 33.083 399 208 13 24 373 207 595 6.66e-47 171
Msa0341180 AT1G03010.3 31.944 432 229 15 24 400 206 627 7.28e-47 171
Msa0341180 AT2G47860.5 31.910 398 207 11 24 375 90 469 3.02e-46 167
Msa0341180 AT2G47860.2 31.910 398 207 11 24 375 90 469 3.02e-46 167
Msa0341180 AT2G47860.1 31.910 398 207 11 24 375 208 587 1.41e-45 167
Msa0341180 AT2G47860.3 31.910 398 207 11 24 375 231 610 1.87e-45 167
Msa0341180 AT4G31820.2 36.585 287 140 8 24 296 159 417 1.18e-44 163
Msa0341180 AT4G31820.1 36.585 287 140 8 24 296 212 470 2.53e-44 163
Msa0341180 AT5G10250.2 29.973 377 227 9 23 371 212 579 1.01e-42 159
Msa0341180 AT2G14820.2 31.351 370 203 9 24 360 209 560 1.30e-42 159
Msa0341180 AT2G14820.1 31.351 370 203 9 24 360 209 560 1.30e-42 159
Msa0341180 AT5G47800.3 33.667 300 182 6 4 292 181 474 1.44e-42 158
Msa0341180 AT5G47800.1 33.667 300 182 6 4 292 181 474 1.44e-42 158
Msa0341180 AT5G47800.4 33.667 300 182 6 4 292 181 474 1.44e-42 158
Msa0341180 AT1G67900.5 33.028 327 178 5 7 294 185 509 1.54e-42 159
Msa0341180 AT1G67900.1 33.028 327 178 5 7 294 185 509 1.54e-42 159
Msa0341180 AT1G67900.3 33.028 327 178 5 7 294 185 509 1.54e-42 159
Msa0341180 AT1G67900.6 33.028 327 178 5 7 294 185 509 1.54e-42 159
Msa0341180 AT1G67900.2 33.028 327 178 5 7 294 185 509 1.54e-42 159
Msa0341180 AT1G67900.4 33.028 327 178 5 7 294 185 509 1.54e-42 159
Msa0341180 AT5G47800.2 33.667 300 182 6 4 292 294 587 4.92e-42 158
Msa0341180 AT5G10250.1 29.700 367 226 9 23 371 212 564 2.39e-41 155
Msa0341180 AT3G08570.1 29.477 363 219 9 24 360 212 563 9.25e-41 154
Msa0341180 AT3G44820.1 29.255 376 222 9 24 360 213 583 1.92e-40 153
Msa0341180 AT4G37590.1 34.783 276 153 7 24 296 216 467 1.39e-38 147
Msa0341180 AT3G50840.2 31.667 360 231 7 24 382 160 505 3.22e-38 145
Msa0341180 AT3G50840.3 31.667 360 231 7 24 382 160 505 3.22e-38 145
Msa0341180 AT3G50840.1 31.667 360 231 7 24 382 196 541 4.57e-38 145
Msa0341180 AT5G67440.2 34.164 281 164 7 24 294 170 439 1.26e-36 141
Msa0341180 AT5G67440.3 34.164 281 164 7 24 294 207 476 1.82e-36 141
Msa0341180 AT5G67440.1 34.164 281 164 7 24 294 207 476 1.82e-36 141
Msa0341180 AT2G23050.2 33.455 275 150 8 24 296 93 336 1.92e-36 137
Msa0341180 AT2G23050.1 33.455 275 150 8 24 296 209 452 8.42e-36 138
Msa0341180 AT3G49970.1 30.502 259 162 7 24 279 151 394 9.14e-32 127
Msa0341180 AT3G49970.2 30.502 259 162 7 24 279 151 394 9.14e-32 127
Msa0341180 AT3G26490.2 32.927 246 111 5 24 233 220 447 6.04e-30 122
Msa0341180 AT5G66560.2 34.914 232 132 5 13 233 247 470 3.18e-27 114
Msa0341180 AT2G47860.6 34.156 243 111 6 24 233 231 457 7.47e-27 112
Msa0341180 AT2G47860.4 34.156 243 111 6 24 233 208 434 1.07e-26 112
Msa0341180 AT3G08660.2 30.088 226 125 4 24 233 198 406 4.30e-24 104
Msa0341180 AT3G19850.1 27.106 273 177 5 24 292 209 463 1.30e-22 100
Msa0341180 AT3G22104.4 33.673 196 121 5 86 279 157 345 8.87e-22 97.4
Msa0341180 AT3G22104.2 33.673 196 121 5 86 279 157 345 8.87e-22 97.4
Msa0341180 AT3G22104.3 33.673 196 121 5 86 279 157 345 8.87e-22 97.4
Msa0341180 AT3G22104.1 33.673 196 121 5 86 279 232 420 8.99e-22 98.2
Msa0341180 AT3G03510.1 30.952 252 145 7 51 295 133 362 4.25e-21 95.5
Msa0341180 AT1G50280.2 25.818 275 178 7 24 288 169 427 1.89e-17 84.7
Msa0341180 AT1G50280.1 25.818 275 178 7 24 288 202 460 2.04e-17 84.7
Msa0341180 AT5G17580.1 27.099 262 162 5 43 295 202 443 1.07e-14 76.6
Msa0341180 AT5G17580.2 27.099 262 162 5 43 295 217 458 1.11e-14 76.6
Msa0341180 AT5G48130.1 24.606 317 197 12 24 329 219 504 1.76e-14 75.9

Find 84 sgRNAs with CRISPR-Local

Find 292 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
TGTTGGTTTGGACTTGTTTC+TGG 0.094629 2_4:+62595245 None:intergenic
CATGATGCTGTTACACTTTC+AGG 0.126707 2_4:+62595026 None:intergenic
GATGAAGCTGAAACTGAATT+TGG 0.156976 2_4:-62593043 Msa0341180:CDS
TCTCAGTTTGTTGCACTTGC+TGG 0.262022 2_4:-62594633 Msa0341180:CDS
TCATACTTGTGGGACCCTTT+TGG 0.268326 2_4:-62594799 Msa0341180:CDS
AACTCAACCGTTACGTTGAT+TGG 0.275986 2_4:-62593327 Msa0341180:CDS
AACTGAAGGAAGACGTTTAC+AGG 0.316073 2_4:-62593192 Msa0341180:CDS
TTACCTTGCTGAAGCTGGTT+TGG 0.320602 2_4:-62594673 Msa0341180:CDS
TCCAAAGTTACTTGTTGGTT+TGG 0.335510 2_4:+62595233 None:intergenic
CTTTCAAACATCAAACAAAA+AGG 0.338570 2_4:-62595152 Msa0341180:CDS
AATAAATATACATATCTATA+AGG 0.350061 2_4:+62593744 None:intergenic
TGGATGTTGAGCTTGTTATT+AGG 0.354204 2_4:-62594779 Msa0341180:CDS
CTTTCTTGCTTCGACACGCT+TGG 0.365749 2_4:+62593472 None:intergenic
ATCTTGAGAATCAAATTTCA+TGG 0.372033 2_4:-62594869 Msa0341180:CDS
TAACTTTGGAATATTGTTGC+TGG 0.379039 2_4:-62595220 Msa0341180:CDS
ATGAAGCTGAAACTGAATTT+GGG 0.381070 2_4:-62593042 Msa0341180:CDS
AACTGGTGCTGCTTTGGTTA+AGG 0.381744 2_4:-62594715 Msa0341180:CDS
AGAAGAAAAGTTTCTTCAAA+TGG 0.382710 2_4:-62593117 Msa0341180:CDS
AATTTGAATTTGAAGTTTCA+AGG 0.404146 2_4:+62595069 None:intergenic
AATATTCCAAAGTTACTTGT+TGG 0.406337 2_4:+62595228 None:intergenic
AGTTAAAACTGGTGCTGCTT+TGG 0.406920 2_4:-62594721 Msa0341180:CDS
CGAAATGAACACACAACAAA+TGG 0.410203 2_4:-62593224 Msa0341180:CDS
GGTGTTCGTTCCGATTTAAT+CGG 0.410626 2_4:-62595131 Msa0341180:CDS
GCTGAAACTGAATTTGGGTT+TGG 0.417674 2_4:-62593037 Msa0341180:CDS
ACAGTGAAAGCCTCTCTATC+AGG 0.425747 2_4:+62592938 None:intergenic
TTGTTATTAGGTTGGTTAAG+AGG 0.429280 2_4:-62594767 Msa0341180:CDS
GAATTTGAAGTTTCAAGGTC+AGG 0.429853 2_4:+62595074 None:intergenic
CATGGAATGGAATCTTTGTC+TGG 0.430911 2_4:+62594957 None:intergenic
ACGGTTGAGTTTCGTTTGTT+CGG 0.438226 2_4:+62593339 None:intergenic
CAGCATCATGGATGAAGAAA+AGG 0.445106 2_4:-62595013 Msa0341180:CDS
GATCATGATGGAGTTAAAAC+TGG 0.446409 2_4:-62594732 Msa0341180:CDS
TTTGGTTAAGGTTGCTAAGT+TGG 0.446507 2_4:-62594703 Msa0341180:CDS
TCCAAACCAACAAGTAACTT+TGG 0.448402 2_4:-62595234 Msa0341180:CDS
GCTGCATGAAGTGAGGCTTC+TGG 0.449394 2_4:+62593409 None:intergenic
GATTGTTACCTTGCTGAAGC+TGG 0.451910 2_4:-62594678 Msa0341180:CDS
CTTCTTTCAGTCATACTTGT+GGG 0.454989 2_4:-62594809 Msa0341180:CDS
TCAGTAGCTCTTGCATGGTT+AGG 0.455773 2_4:+62594603 None:intergenic
TTCAAGGTCAGGGAGCCATT+TGG 0.459356 2_4:+62595085 None:intergenic
GATGATGGAACCGATTAAAT+CGG 0.462106 2_4:+62595121 None:intergenic
TAACAAGCTCAACATCCAAA+AGG 0.463547 2_4:+62594784 None:intergenic
TGTTGAGCTTGTTATTAGGT+TGG 0.469392 2_4:-62594775 Msa0341180:CDS
TGAAATTTGATTCTCAAGAT+CGG 0.493137 2_4:+62594872 None:intergenic
GTGCTTCTTTCAGTAGCTTG+AGG 0.496152 2_4:-62593303 Msa0341180:CDS
CAATGTCATGCAAGCACAGA+TGG 0.500225 2_4:-62593155 Msa0341180:CDS
CTAATATAGATGTCAAAGCT+TGG 0.502673 2_4:-62593776 Msa0341180:intron
GTTTGGAAGGCAAACACCTA+TGG 0.502755 2_4:-62593020 Msa0341180:CDS
CCTTCTTAAAACAGCAAACA+TGG 0.504569 2_4:-62594919 Msa0341180:CDS
CTAGTACTGTGGTCAAAAGT+AGG 0.505830 2_4:-62592988 Msa0341180:CDS
AACAAGCTCAACATCCAAAA+GGG 0.506792 2_4:+62594785 None:intergenic
AAAGTAGGACTCCTCATAAG+TGG 0.509603 2_4:-62592973 Msa0341180:CDS
AATTTGAAGTTTCAAGGTCA+GGG 0.510124 2_4:+62595075 None:intergenic
CATGCAAGAGCTACTGATGA+TGG 0.510855 2_4:-62594597 Msa0341180:intron
AAACTGAATTTGGGTTTGGA+AGG 0.516582 2_4:-62593033 Msa0341180:CDS
TTGAGGAGTCCAAGTGGATA+CGG 0.521600 2_4:-62593286 Msa0341180:CDS
AACACACCACCGTATCCACT+TGG 0.522164 2_4:+62593277 None:intergenic
TGGTGGAAGAACACTGACTA+AGG 0.524858 2_4:+62594977 None:intergenic
GGAAGCATAGTGAGTGATGA+TGG 0.534975 2_4:+62595106 None:intergenic
CTGAAAGTGTAACAGCATCA+TGG 0.536672 2_4:-62595025 Msa0341180:CDS
AAGGAGGAAGTTGCATGGAA+TGG 0.540539 2_4:+62594944 None:intergenic
CGGTGGTGTGTTGGACCCAC+AGG 0.552148 2_4:-62593266 Msa0341180:CDS
TATTAAAAGCATCGGAGAGA+CGG 0.553022 2_4:-62593080 Msa0341180:CDS
TGTGTAGGTTGATTGATAGC+AGG 0.557107 2_4:-62593441 Msa0341180:CDS
TCACTCACTATGCTTCCAAA+TGG 0.563233 2_4:-62595100 Msa0341180:CDS
GCAAGCACAGATGGACAAGA+TGG 0.567785 2_4:-62593146 Msa0341180:CDS
AATATACATATCTATAAGGA+AGG 0.570884 2_4:+62593748 None:intergenic
CCTTCTTTCAGTCATACTTG+TGG 0.572660 2_4:-62594810 Msa0341180:CDS
CATCATCAGTAGCTCTTGCA+TGG 0.574138 2_4:+62594598 None:intergenic
AGATGCATGCATCCTTGACA+TGG 0.577074 2_4:-62595192 Msa0341180:CDS
TTAGAAAGACACCGTGCCTG+TGG 0.583694 2_4:+62593250 None:intergenic
GGACATGAAAACTAGTACTG+TGG 0.589920 2_4:-62592999 Msa0341180:CDS
TAATGAAGCAATCCATGTCA+AGG 0.592917 2_4:+62595180 None:intergenic
AAATCTCTGTCCTGATAGAG+AGG 0.598818 2_4:-62592948 Msa0341180:CDS
ACTTGAATAACAGCTCTCAC+AGG 0.608705 2_4:+62593370 None:intergenic
CCACAAGTATGACTGAAAGA+AGG 0.608970 2_4:+62594810 None:intergenic
AAGTGGATACGGTGGTGTGT+TGG 0.620100 2_4:-62593275 Msa0341180:CDS
TAGAAAGACACCGTGCCTGT+GGG 0.630868 2_4:+62593251 None:intergenic
TTCATGCAGCTCAAAACGAA+CGG 0.639540 2_4:-62593396 Msa0341180:CDS
AGGCGAAGGAGGAAGTTGCA+TGG 0.639865 2_4:+62594939 None:intergenic
GGAATGGAATCTTTGTCTGG+TGG 0.645080 2_4:+62594960 None:intergenic
CATCCAAACCAGCTTCAGCA+AGG 0.652544 2_4:+62594670 None:intergenic
GTGTGTTGGACCCACAGGCA+CGG 0.663649 2_4:-62593261 Msa0341180:CDS
AAGCACTCCAATCAACGTAA+CGG 0.670586 2_4:+62593320 None:intergenic
AGTAGCTTGAGGAGTCCAAG+TGG 0.684181 2_4:-62593292 Msa0341180:CDS
AGGAGTCCAAGTGGATACGG+TGG 0.701403 2_4:-62593283 Msa0341180:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! AATAAATATACATATCTATA+AGG + chr2_4:62594447-62594466 None:intergenic 10.0%
!!! TATTTATTTATTTTTGCAAT+AGG - chr2_4:62594688-62594707 Msa0341180:CDS 10.0%
!! AATAAATATACATATCTATA+AGG + chr2_4:62594447-62594466 None:intergenic 10.0%
!!! TATTTATTTATTTTTGCAAT+AGG - chr2_4:62594688-62594707 Msa0341180:CDS 10.0%
!!! TTTTTGTTTGATGTTTGAAA+GGG + chr2_4:62593037-62593056 None:intergenic 20.0%
!!! AATTTGAATTTGAAGTTTCA+AGG + chr2_4:62593122-62593141 None:intergenic 20.0%
!! TAATTCTTTATAAAGATCTC+AGG - chr2_4:62593680-62593699 Msa0341180:intron 20.0%
!! AGAAAGAAATAAGTATTAAG+AGG - chr2_4:62593795-62593814 Msa0341180:intron 20.0%
!!! TATACTTGTAAAGTCAATTT+TGG + chr2_4:62594163-62594182 None:intergenic 20.0%
!!! ATTGTTTGTTTTTCATCTAA+AGG - chr2_4:62594196-62594215 Msa0341180:intron 20.0%
!! AATATACATATCTATAAGGA+AGG + chr2_4:62594443-62594462 None:intergenic 20.0%
!!! AAGAAAATTAATGTGCTTTT+TGG + chr2_4:62594478-62594497 None:intergenic 20.0%
!!! TTTTTGTTTGATGTTTGAAA+GGG + chr2_4:62593037-62593056 None:intergenic 20.0%
!!! AATTTGAATTTGAAGTTTCA+AGG + chr2_4:62593122-62593141 None:intergenic 20.0%
!! TAATTCTTTATAAAGATCTC+AGG - chr2_4:62593680-62593699 Msa0341180:intron 20.0%
!! AGAAAGAAATAAGTATTAAG+AGG - chr2_4:62593795-62593814 Msa0341180:intron 20.0%
!!! TATACTTGTAAAGTCAATTT+TGG + chr2_4:62594163-62594182 None:intergenic 20.0%
!!! ATTGTTTGTTTTTCATCTAA+AGG - chr2_4:62594196-62594215 Msa0341180:intron 20.0%
!! AATATACATATCTATAAGGA+AGG + chr2_4:62594443-62594462 None:intergenic 20.0%
!!! AAGAAAATTAATGTGCTTTT+TGG + chr2_4:62594478-62594497 None:intergenic 20.0%
! AATATTCCAAAGTTACTTGT+TGG + chr2_4:62592963-62592982 None:intergenic 25.0%
!!! CTTTTTGTTTGATGTTTGAA+AGG + chr2_4:62593038-62593057 None:intergenic 25.0%
! CTTTCAAACATCAAACAAAA+AGG - chr2_4:62593036-62593055 Msa0341180:CDS 25.0%
! TGAAATTTGATTCTCAAGAT+CGG + chr2_4:62593319-62593338 None:intergenic 25.0%
! ATCTTGAGAATCAAATTTCA+TGG - chr2_4:62593319-62593338 Msa0341180:CDS 25.0%
!!! TACTTTAAGATAAGTGTCAA+TGG + chr2_4:62593628-62593647 None:intergenic 25.0%
! AAGAAATAAGTATTAAGAGG+AGG - chr2_4:62593798-62593817 Msa0341180:intron 25.0%
!!! TATCTAGATTTGGAATTTTG+TGG + chr2_4:62594243-62594262 None:intergenic 25.0%
! ACAAAATTCCAAATCTAGAT+AGG - chr2_4:62594242-62594261 Msa0341180:intron 25.0%
! ATTCAAGTAACATACCATTA+AGG - chr2_4:62594502-62594521 Msa0341180:intron 25.0%
! AATGGAGATAAAAAAACTGA+AGG - chr2_4:62594982-62595001 Msa0341180:CDS 25.0%
! AGAAGAAAAGTTTCTTCAAA+TGG - chr2_4:62595071-62595090 Msa0341180:CDS 25.0%
!!! CTTGCTTTTATTAAAAGCAT+CGG - chr2_4:62595100-62595119 Msa0341180:CDS 25.0%
! AATATTCCAAAGTTACTTGT+TGG + chr2_4:62592963-62592982 None:intergenic 25.0%
!!! CTTTTTGTTTGATGTTTGAA+AGG + chr2_4:62593038-62593057 None:intergenic 25.0%
! CTTTCAAACATCAAACAAAA+AGG - chr2_4:62593036-62593055 Msa0341180:CDS 25.0%
! TGAAATTTGATTCTCAAGAT+CGG + chr2_4:62593319-62593338 None:intergenic 25.0%
! ATCTTGAGAATCAAATTTCA+TGG - chr2_4:62593319-62593338 Msa0341180:CDS 25.0%
!!! TACTTTAAGATAAGTGTCAA+TGG + chr2_4:62593628-62593647 None:intergenic 25.0%
! AAGAAATAAGTATTAAGAGG+AGG - chr2_4:62593798-62593817 Msa0341180:intron 25.0%
!!! TATCTAGATTTGGAATTTTG+TGG + chr2_4:62594243-62594262 None:intergenic 25.0%
! ACAAAATTCCAAATCTAGAT+AGG - chr2_4:62594242-62594261 Msa0341180:intron 25.0%
! ATTCAAGTAACATACCATTA+AGG - chr2_4:62594502-62594521 Msa0341180:intron 25.0%
! AATGGAGATAAAAAAACTGA+AGG - chr2_4:62594982-62595001 Msa0341180:CDS 25.0%
! AGAAGAAAAGTTTCTTCAAA+TGG - chr2_4:62595071-62595090 Msa0341180:CDS 25.0%
!!! CTTGCTTTTATTAAAAGCAT+CGG - chr2_4:62595100-62595119 Msa0341180:CDS 25.0%
!! TAACTTTGGAATATTGTTGC+TGG - chr2_4:62592968-62592987 Msa0341180:CDS 30.0%
! AATTTGAAGTTTCAAGGTCA+GGG + chr2_4:62593116-62593135 None:intergenic 30.0%
!! TTGTTATTAGGTTGGTTAAG+AGG - chr2_4:62593421-62593440 Msa0341180:CDS 30.0%
!!! TTTTTGAGTTTGGATCATGA+TGG - chr2_4:62593444-62593463 Msa0341180:CDS 30.0%
! CCACACAAGAAACATTTTAT+AGG + chr2_4:62593839-62593858 None:intergenic 30.0%
CCTATAAAATGTTTCTTGTG+TGG - chr2_4:62593836-62593855 Msa0341180:intron 30.0%
!! AAAGTCAATTTTGGTGAAGT+CGG + chr2_4:62594154-62594173 None:intergenic 30.0%
ATGATCCATTTCAGTAAAAC+AGG + chr2_4:62594358-62594377 None:intergenic 30.0%
CTAATATAGATGTCAAAGCT+TGG - chr2_4:62594412-62594431 Msa0341180:intron 30.0%
AAGTAACATACCATTAAGGT+TGG - chr2_4:62594506-62594525 Msa0341180:intron 30.0%
ATTATTGGATCAAGATCAGA+TGG + chr2_4:62594579-62594598 None:intergenic 30.0%
AAGAAAGAAAAAGTCTGTGT+AGG - chr2_4:62594732-62594751 Msa0341180:CDS 30.0%
ATGAAGCTGAAACTGAATTT+GGG - chr2_4:62595146-62595165 Msa0341180:CDS 30.0%
!! TAACTTTGGAATATTGTTGC+TGG - chr2_4:62592968-62592987 Msa0341180:CDS 30.0%
! AATTTGAAGTTTCAAGGTCA+GGG + chr2_4:62593116-62593135 None:intergenic 30.0%
!! TTGTTATTAGGTTGGTTAAG+AGG - chr2_4:62593421-62593440 Msa0341180:CDS 30.0%
!!! TTTTTGAGTTTGGATCATGA+TGG - chr2_4:62593444-62593463 Msa0341180:CDS 30.0%
! CCACACAAGAAACATTTTAT+AGG + chr2_4:62593839-62593858 None:intergenic 30.0%
CCTATAAAATGTTTCTTGTG+TGG - chr2_4:62593836-62593855 Msa0341180:intron 30.0%
!! AAAGTCAATTTTGGTGAAGT+CGG + chr2_4:62594154-62594173 None:intergenic 30.0%
ATGATCCATTTCAGTAAAAC+AGG + chr2_4:62594358-62594377 None:intergenic 30.0%
CTAATATAGATGTCAAAGCT+TGG - chr2_4:62594412-62594431 Msa0341180:intron 30.0%
AAGTAACATACCATTAAGGT+TGG - chr2_4:62594506-62594525 Msa0341180:intron 30.0%
ATTATTGGATCAAGATCAGA+TGG + chr2_4:62594579-62594598 None:intergenic 30.0%
AAGAAAGAAAAAGTCTGTGT+AGG - chr2_4:62594732-62594751 Msa0341180:CDS 30.0%
ATGAAGCTGAAACTGAATTT+GGG - chr2_4:62595146-62595165 Msa0341180:CDS 30.0%
TCCAAACCAACAAGTAACTT+TGG - chr2_4:62592954-62592973 Msa0341180:CDS 35.0%
! TCCAAAGTTACTTGTTGGTT+TGG + chr2_4:62592958-62592977 None:intergenic 35.0%
TAATGAAGCAATCCATGTCA+AGG + chr2_4:62593011-62593030 None:intergenic 35.0%
!! GATGATGGAACCGATTAAAT+CGG + chr2_4:62593070-62593089 None:intergenic 35.0%
! GAATTTGAAGTTTCAAGGTC+AGG + chr2_4:62593117-62593136 None:intergenic 35.0%
!!! CCATGTTTGCTGTTTTAAGA+AGG + chr2_4:62593272-62593291 None:intergenic 35.0%
CCTTCTTAAAACAGCAAACA+TGG - chr2_4:62593269-62593288 Msa0341180:CDS 35.0%
CTTCTTTCAGTCATACTTGT+GGG - chr2_4:62593379-62593398 Msa0341180:CDS 35.0%
AACAAGCTCAACATCCAAAA+GGG + chr2_4:62593406-62593425 None:intergenic 35.0%
TAACAAGCTCAACATCCAAA+AGG + chr2_4:62593407-62593426 None:intergenic 35.0%
!! TGGATGTTGAGCTTGTTATT+AGG - chr2_4:62593409-62593428 Msa0341180:CDS 35.0%
!! TGTTGAGCTTGTTATTAGGT+TGG - chr2_4:62593413-62593432 Msa0341180:CDS 35.0%
!!! GGTTAAGAGGTTTTTGAGTT+TGG - chr2_4:62593434-62593453 Msa0341180:CDS 35.0%
! GATCATGATGGAGTTAAAAC+TGG - chr2_4:62593456-62593475 Msa0341180:CDS 35.0%
TTTGGTTAAGGTTGCTAAGT+TGG - chr2_4:62593485-62593504 Msa0341180:intron 35.0%
AATGTTTCTTGTGTGGTGAT+TGG - chr2_4:62593843-62593862 Msa0341180:intron 35.0%
! ACTCTCTGATGTACTTTTGT+TGG - chr2_4:62593879-62593898 Msa0341180:intron 35.0%
! TGATGTACTTTTGTTGGACT+TGG - chr2_4:62593885-62593904 Msa0341180:intron 35.0%
TGTGTGACTTTCTAACTAGA+AGG + chr2_4:62593914-62593933 None:intergenic 35.0%
ATTGTTTCATGTGTGTTCAC+CGG - chr2_4:62594026-62594045 Msa0341180:intron 35.0%
ACTCACATATATGCGTTTGT+AGG - chr2_4:62594055-62594074 Msa0341180:intron 35.0%
AATCAAGAGATATCGTTCGT+CGG - chr2_4:62594101-62594120 Msa0341180:intron 35.0%
!! AAGTCAATTTTGGTGAAGTC+GGG + chr2_4:62594153-62594172 None:intergenic 35.0%
TTCCAAATCTAGATAGGACA+TGG - chr2_4:62594248-62594267 Msa0341180:intron 35.0%
! TGTTGATTGCAACTAGCTAT+TGG + chr2_4:62594275-62594294 None:intergenic 35.0%
GCAATCAACATTTCTCTACA+TGG - chr2_4:62594285-62594304 Msa0341180:intron 35.0%
TGCATGCATCAGTATATATG+TGG + chr2_4:62594323-62594342 None:intergenic 35.0%
! ATGTGCCTGTTTTACTGAAA+TGG - chr2_4:62594350-62594369 Msa0341180:intron 35.0%
TAACATACCATTAAGGTTGG+AGG - chr2_4:62594509-62594528 Msa0341180:intron 35.0%
!! GATGGTCCATATTTTAAGCT+CGG + chr2_4:62594561-62594580 None:intergenic 35.0%
GTCAAGACATCGGTAATTAT+TGG + chr2_4:62594594-62594613 None:intergenic 35.0%
ATTCCATTCAGTCAAGACAT+CGG + chr2_4:62594604-62594623 None:intergenic 35.0%
AGATTTAGATTGCATGCTGT+TGG + chr2_4:62594628-62594647 None:intergenic 35.0%
CGAAATGAACACACAACAAA+TGG - chr2_4:62594964-62594983 Msa0341180:CDS 35.0%
!! TATTAAAAGCATCGGAGAGA+CGG - chr2_4:62595108-62595127 Msa0341180:CDS 35.0%
GATGAAGCTGAAACTGAATT+TGG - chr2_4:62595145-62595164 Msa0341180:CDS 35.0%
! AAACTGAATTTGGGTTTGGA+AGG - chr2_4:62595155-62595174 Msa0341180:CDS 35.0%
!!! GTACTAGTTTTCATGTCCAT+AGG + chr2_4:62595187-62595206 None:intergenic 35.0%
! CAGAGATTTTTCCACTTATG+AGG + chr2_4:62595229-62595248 None:intergenic 35.0%
TCCAAACCAACAAGTAACTT+TGG - chr2_4:62592954-62592973 Msa0341180:CDS 35.0%
! TCCAAAGTTACTTGTTGGTT+TGG + chr2_4:62592958-62592977 None:intergenic 35.0%
TAATGAAGCAATCCATGTCA+AGG + chr2_4:62593011-62593030 None:intergenic 35.0%
!! GATGATGGAACCGATTAAAT+CGG + chr2_4:62593070-62593089 None:intergenic 35.0%
! GAATTTGAAGTTTCAAGGTC+AGG + chr2_4:62593117-62593136 None:intergenic 35.0%
!!! CCATGTTTGCTGTTTTAAGA+AGG + chr2_4:62593272-62593291 None:intergenic 35.0%
CCTTCTTAAAACAGCAAACA+TGG - chr2_4:62593269-62593288 Msa0341180:CDS 35.0%
CTTCTTTCAGTCATACTTGT+GGG - chr2_4:62593379-62593398 Msa0341180:CDS 35.0%
AACAAGCTCAACATCCAAAA+GGG + chr2_4:62593406-62593425 None:intergenic 35.0%
TAACAAGCTCAACATCCAAA+AGG + chr2_4:62593407-62593426 None:intergenic 35.0%
!! TGGATGTTGAGCTTGTTATT+AGG - chr2_4:62593409-62593428 Msa0341180:CDS 35.0%
!! TGTTGAGCTTGTTATTAGGT+TGG - chr2_4:62593413-62593432 Msa0341180:CDS 35.0%
!!! GGTTAAGAGGTTTTTGAGTT+TGG - chr2_4:62593434-62593453 Msa0341180:CDS 35.0%
! GATCATGATGGAGTTAAAAC+TGG - chr2_4:62593456-62593475 Msa0341180:CDS 35.0%
TTTGGTTAAGGTTGCTAAGT+TGG - chr2_4:62593485-62593504 Msa0341180:intron 35.0%
AATGTTTCTTGTGTGGTGAT+TGG - chr2_4:62593843-62593862 Msa0341180:intron 35.0%
! ACTCTCTGATGTACTTTTGT+TGG - chr2_4:62593879-62593898 Msa0341180:intron 35.0%
! TGATGTACTTTTGTTGGACT+TGG - chr2_4:62593885-62593904 Msa0341180:intron 35.0%
TGTGTGACTTTCTAACTAGA+AGG + chr2_4:62593914-62593933 None:intergenic 35.0%
ATTGTTTCATGTGTGTTCAC+CGG - chr2_4:62594026-62594045 Msa0341180:intron 35.0%
ACTCACATATATGCGTTTGT+AGG - chr2_4:62594055-62594074 Msa0341180:intron 35.0%
AATCAAGAGATATCGTTCGT+CGG - chr2_4:62594101-62594120 Msa0341180:intron 35.0%
!! AAGTCAATTTTGGTGAAGTC+GGG + chr2_4:62594153-62594172 None:intergenic 35.0%
TTCCAAATCTAGATAGGACA+TGG - chr2_4:62594248-62594267 Msa0341180:intron 35.0%
! TGTTGATTGCAACTAGCTAT+TGG + chr2_4:62594275-62594294 None:intergenic 35.0%
GCAATCAACATTTCTCTACA+TGG - chr2_4:62594285-62594304 Msa0341180:intron 35.0%
TGCATGCATCAGTATATATG+TGG + chr2_4:62594323-62594342 None:intergenic 35.0%
! ATGTGCCTGTTTTACTGAAA+TGG - chr2_4:62594350-62594369 Msa0341180:intron 35.0%
TAACATACCATTAAGGTTGG+AGG - chr2_4:62594509-62594528 Msa0341180:intron 35.0%
!! GATGGTCCATATTTTAAGCT+CGG + chr2_4:62594561-62594580 None:intergenic 35.0%
GTCAAGACATCGGTAATTAT+TGG + chr2_4:62594594-62594613 None:intergenic 35.0%
ATTCCATTCAGTCAAGACAT+CGG + chr2_4:62594604-62594623 None:intergenic 35.0%
AGATTTAGATTGCATGCTGT+TGG + chr2_4:62594628-62594647 None:intergenic 35.0%
CGAAATGAACACACAACAAA+TGG - chr2_4:62594964-62594983 Msa0341180:CDS 35.0%
!! TATTAAAAGCATCGGAGAGA+CGG - chr2_4:62595108-62595127 Msa0341180:CDS 35.0%
GATGAAGCTGAAACTGAATT+TGG - chr2_4:62595145-62595164 Msa0341180:CDS 35.0%
! AAACTGAATTTGGGTTTGGA+AGG - chr2_4:62595155-62595174 Msa0341180:CDS 35.0%
!!! GTACTAGTTTTCATGTCCAT+AGG + chr2_4:62595187-62595206 None:intergenic 35.0%
! CAGAGATTTTTCCACTTATG+AGG + chr2_4:62595229-62595248 None:intergenic 35.0%
!! TGTTGGTTTGGACTTGTTTC+TGG + chr2_4:62592946-62592965 None:intergenic 40.0%
GGTGTTCGTTCCGATTTAAT+CGG - chr2_4:62593057-62593076 Msa0341180:CDS 40.0%
TCACTCACTATGCTTCCAAA+TGG - chr2_4:62593088-62593107 Msa0341180:CDS 40.0%
CATGATGCTGTTACACTTTC+AGG + chr2_4:62593165-62593184 None:intergenic 40.0%
! CTGAAAGTGTAACAGCATCA+TGG - chr2_4:62593163-62593182 Msa0341180:CDS 40.0%
CAGCATCATGGATGAAGAAA+AGG - chr2_4:62593175-62593194 Msa0341180:CDS 40.0%
CATGGAATGGAATCTTTGTC+TGG + chr2_4:62593234-62593253 None:intergenic 40.0%
!!! TTGCTGTTTTAAGAAGGCGA+AGG + chr2_4:62593266-62593285 None:intergenic 40.0%
CCACAAGTATGACTGAAAGA+AGG + chr2_4:62593381-62593400 None:intergenic 40.0%
CCTTCTTTCAGTCATACTTG+TGG - chr2_4:62593378-62593397 Msa0341180:CDS 40.0%
!! AGTTAAAACTGGTGCTGCTT+TGG - chr2_4:62593467-62593486 Msa0341180:CDS 40.0%
AGTCCACTGAAATTGACACT+GGG + chr2_4:62593716-62593735 None:intergenic 40.0%
TAGTCCACTGAAATTGACAC+TGG + chr2_4:62593717-62593736 None:intergenic 40.0%
TACATCAGAGAGTCTAATGC+TGG + chr2_4:62593872-62593891 None:intergenic 40.0%
ACCGTTAGATTGACGAAGAT+CGG - chr2_4:62593948-62593967 Msa0341180:intron 40.0%
TCCGATCTTCGTCAATCTAA+CGG + chr2_4:62593952-62593971 None:intergenic 40.0%
CATATATGTGAGTCTCATGC+CGG + chr2_4:62594048-62594067 None:intergenic 40.0%
ATCTCTTGATTGCGTGACTA+CGG + chr2_4:62594092-62594111 None:intergenic 40.0%
TTCGTCGGATTGACAAAGAT+CGG - chr2_4:62594116-62594135 Msa0341180:intron 40.0%
GTCCATGTCCTATCTAGATT+TGG + chr2_4:62594253-62594272 None:intergenic 40.0%
GCTCTACCGAGCTTAAAATA+TGG - chr2_4:62594552-62594571 Msa0341180:intron 40.0%
TTACCGATGTCTTGACTGAA+TGG - chr2_4:62594598-62594617 Msa0341180:CDS 40.0%
!! TGTGTAGGTTGATTGATAGC+AGG - chr2_4:62594747-62594766 Msa0341180:CDS 40.0%
TTCATGCAGCTCAAAACGAA+CGG - chr2_4:62594792-62594811 Msa0341180:CDS 40.0%
ACTTGAATAACAGCTCTCAC+AGG + chr2_4:62594821-62594840 None:intergenic 40.0%
ACGGTTGAGTTTCGTTTGTT+CGG + chr2_4:62594852-62594871 None:intergenic 40.0%
AACTCAACCGTTACGTTGAT+TGG - chr2_4:62594861-62594880 Msa0341180:CDS 40.0%
AAGCACTCCAATCAACGTAA+CGG + chr2_4:62594871-62594890 None:intergenic 40.0%
AACTGAAGGAAGACGTTTAC+AGG - chr2_4:62594996-62595015 Msa0341180:CDS 40.0%
! GCTGAAACTGAATTTGGGTT+TGG - chr2_4:62595151-62595170 Msa0341180:CDS 40.0%
GGACATGAAAACTAGTACTG+TGG - chr2_4:62595189-62595208 Msa0341180:CDS 40.0%
CTAGTACTGTGGTCAAAAGT+AGG - chr2_4:62595200-62595219 Msa0341180:CDS 40.0%
AAAGTAGGACTCCTCATAAG+TGG - chr2_4:62595215-62595234 Msa0341180:CDS 40.0%
AAATCTCTGTCCTGATAGAG+AGG - chr2_4:62595240-62595259 Msa0341180:CDS 40.0%
!! TGTTGGTTTGGACTTGTTTC+TGG + chr2_4:62592946-62592965 None:intergenic 40.0%
GGTGTTCGTTCCGATTTAAT+CGG - chr2_4:62593057-62593076 Msa0341180:CDS 40.0%
TCACTCACTATGCTTCCAAA+TGG - chr2_4:62593088-62593107 Msa0341180:CDS 40.0%
CATGATGCTGTTACACTTTC+AGG + chr2_4:62593165-62593184 None:intergenic 40.0%
! CTGAAAGTGTAACAGCATCA+TGG - chr2_4:62593163-62593182 Msa0341180:CDS 40.0%
CAGCATCATGGATGAAGAAA+AGG - chr2_4:62593175-62593194 Msa0341180:CDS 40.0%
CATGGAATGGAATCTTTGTC+TGG + chr2_4:62593234-62593253 None:intergenic 40.0%
!!! TTGCTGTTTTAAGAAGGCGA+AGG + chr2_4:62593266-62593285 None:intergenic 40.0%
CCACAAGTATGACTGAAAGA+AGG + chr2_4:62593381-62593400 None:intergenic 40.0%
CCTTCTTTCAGTCATACTTG+TGG - chr2_4:62593378-62593397 Msa0341180:CDS 40.0%
!! AGTTAAAACTGGTGCTGCTT+TGG - chr2_4:62593467-62593486 Msa0341180:CDS 40.0%
AGTCCACTGAAATTGACACT+GGG + chr2_4:62593716-62593735 None:intergenic 40.0%
TAGTCCACTGAAATTGACAC+TGG + chr2_4:62593717-62593736 None:intergenic 40.0%
TACATCAGAGAGTCTAATGC+TGG + chr2_4:62593872-62593891 None:intergenic 40.0%
ACCGTTAGATTGACGAAGAT+CGG - chr2_4:62593948-62593967 Msa0341180:intron 40.0%
TCCGATCTTCGTCAATCTAA+CGG + chr2_4:62593952-62593971 None:intergenic 40.0%
CATATATGTGAGTCTCATGC+CGG + chr2_4:62594048-62594067 None:intergenic 40.0%
ATCTCTTGATTGCGTGACTA+CGG + chr2_4:62594092-62594111 None:intergenic 40.0%
TTCGTCGGATTGACAAAGAT+CGG - chr2_4:62594116-62594135 Msa0341180:intron 40.0%
GTCCATGTCCTATCTAGATT+TGG + chr2_4:62594253-62594272 None:intergenic 40.0%
GCTCTACCGAGCTTAAAATA+TGG - chr2_4:62594552-62594571 Msa0341180:intron 40.0%
TTACCGATGTCTTGACTGAA+TGG - chr2_4:62594598-62594617 Msa0341180:CDS 40.0%
!! TGTGTAGGTTGATTGATAGC+AGG - chr2_4:62594747-62594766 Msa0341180:CDS 40.0%
TTCATGCAGCTCAAAACGAA+CGG - chr2_4:62594792-62594811 Msa0341180:CDS 40.0%
ACTTGAATAACAGCTCTCAC+AGG + chr2_4:62594821-62594840 None:intergenic 40.0%
ACGGTTGAGTTTCGTTTGTT+CGG + chr2_4:62594852-62594871 None:intergenic 40.0%
AACTCAACCGTTACGTTGAT+TGG - chr2_4:62594861-62594880 Msa0341180:CDS 40.0%
AAGCACTCCAATCAACGTAA+CGG + chr2_4:62594871-62594890 None:intergenic 40.0%
AACTGAAGGAAGACGTTTAC+AGG - chr2_4:62594996-62595015 Msa0341180:CDS 40.0%
! GCTGAAACTGAATTTGGGTT+TGG - chr2_4:62595151-62595170 Msa0341180:CDS 40.0%
GGACATGAAAACTAGTACTG+TGG - chr2_4:62595189-62595208 Msa0341180:CDS 40.0%
CTAGTACTGTGGTCAAAAGT+AGG - chr2_4:62595200-62595219 Msa0341180:CDS 40.0%
AAAGTAGGACTCCTCATAAG+TGG - chr2_4:62595215-62595234 Msa0341180:CDS 40.0%
AAATCTCTGTCCTGATAGAG+AGG - chr2_4:62595240-62595259 Msa0341180:CDS 40.0%
AGATGCATGCATCCTTGACA+TGG - chr2_4:62592996-62593015 Msa0341180:CDS 45.0%
! GGAAGCATAGTGAGTGATGA+TGG + chr2_4:62593085-62593104 None:intergenic 45.0%
! TGGTGGAAGAACACTGACTA+AGG + chr2_4:62593214-62593233 None:intergenic 45.0%
GGAATGGAATCTTTGTCTGG+TGG + chr2_4:62593231-62593250 None:intergenic 45.0%
AAGGAGGAAGTTGCATGGAA+TGG + chr2_4:62593247-62593266 None:intergenic 45.0%
!!! CTGTTTTAAGAAGGCGAAGG+AGG + chr2_4:62593263-62593282 None:intergenic 45.0%
! TCATACTTGTGGGACCCTTT+TGG - chr2_4:62593389-62593408 Msa0341180:CDS 45.0%
!! AACTGGTGCTGCTTTGGTTA+AGG - chr2_4:62593473-62593492 Msa0341180:CDS 45.0%
GATTGTTACCTTGCTGAAGC+TGG - chr2_4:62593510-62593529 Msa0341180:intron 45.0%
TTACCTTGCTGAAGCTGGTT+TGG - chr2_4:62593515-62593534 Msa0341180:intron 45.0%
!! TCTCAGTTTGTTGCACTTGC+TGG - chr2_4:62593555-62593574 Msa0341180:intron 45.0%
TCAGTAGCTCTTGCATGGTT+AGG + chr2_4:62593588-62593607 None:intergenic 45.0%
CATCATCAGTAGCTCTTGCA+TGG + chr2_4:62593593-62593612 None:intergenic 45.0%
CATGCAAGAGCTACTGATGA+TGG - chr2_4:62593591-62593610 Msa0341180:intron 45.0%
CTTCCCAGTGTCAATTTCAG+TGG - chr2_4:62593710-62593729 Msa0341180:intron 45.0%
TCTCTTGATTGCGTGACTAC+GGG + chr2_4:62594091-62594110 None:intergenic 45.0%
ACTAGCTCCTCCAACCTTAA+TGG + chr2_4:62594519-62594538 None:intergenic 45.0%
!! GTTTTGAGCTGCATGAAGTG+AGG + chr2_4:62594789-62594808 None:intergenic 45.0%
GTGCTTCTTTCAGTAGCTTG+AGG - chr2_4:62594885-62594904 Msa0341180:CDS 45.0%
TTGAGGAGTCCAAGTGGATA+CGG - chr2_4:62594902-62594921 Msa0341180:CDS 45.0%
CAATGTCATGCAAGCACAGA+TGG - chr2_4:62595033-62595052 Msa0341180:CDS 45.0%
GTTTGGAAGGCAAACACCTA+TGG - chr2_4:62595168-62595187 Msa0341180:CDS 45.0%
ACAGTGAAAGCCTCTCTATC+AGG + chr2_4:62595253-62595272 None:intergenic 45.0%
AGATGCATGCATCCTTGACA+TGG - chr2_4:62592996-62593015 Msa0341180:CDS 45.0%
! GGAAGCATAGTGAGTGATGA+TGG + chr2_4:62593085-62593104 None:intergenic 45.0%
! TGGTGGAAGAACACTGACTA+AGG + chr2_4:62593214-62593233 None:intergenic 45.0%
GGAATGGAATCTTTGTCTGG+TGG + chr2_4:62593231-62593250 None:intergenic 45.0%
AAGGAGGAAGTTGCATGGAA+TGG + chr2_4:62593247-62593266 None:intergenic 45.0%
!!! CTGTTTTAAGAAGGCGAAGG+AGG + chr2_4:62593263-62593282 None:intergenic 45.0%
! TCATACTTGTGGGACCCTTT+TGG - chr2_4:62593389-62593408 Msa0341180:CDS 45.0%
!! AACTGGTGCTGCTTTGGTTA+AGG - chr2_4:62593473-62593492 Msa0341180:CDS 45.0%
GATTGTTACCTTGCTGAAGC+TGG - chr2_4:62593510-62593529 Msa0341180:intron 45.0%
TTACCTTGCTGAAGCTGGTT+TGG - chr2_4:62593515-62593534 Msa0341180:intron 45.0%
!! TCTCAGTTTGTTGCACTTGC+TGG - chr2_4:62593555-62593574 Msa0341180:intron 45.0%
TCAGTAGCTCTTGCATGGTT+AGG + chr2_4:62593588-62593607 None:intergenic 45.0%
CATCATCAGTAGCTCTTGCA+TGG + chr2_4:62593593-62593612 None:intergenic 45.0%
CATGCAAGAGCTACTGATGA+TGG - chr2_4:62593591-62593610 Msa0341180:intron 45.0%
CTTCCCAGTGTCAATTTCAG+TGG - chr2_4:62593710-62593729 Msa0341180:intron 45.0%
TCTCTTGATTGCGTGACTAC+GGG + chr2_4:62594091-62594110 None:intergenic 45.0%
ACTAGCTCCTCCAACCTTAA+TGG + chr2_4:62594519-62594538 None:intergenic 45.0%
!! GTTTTGAGCTGCATGAAGTG+AGG + chr2_4:62594789-62594808 None:intergenic 45.0%
GTGCTTCTTTCAGTAGCTTG+AGG - chr2_4:62594885-62594904 Msa0341180:CDS 45.0%
TTGAGGAGTCCAAGTGGATA+CGG - chr2_4:62594902-62594921 Msa0341180:CDS 45.0%
CAATGTCATGCAAGCACAGA+TGG - chr2_4:62595033-62595052 Msa0341180:CDS 45.0%
GTTTGGAAGGCAAACACCTA+TGG - chr2_4:62595168-62595187 Msa0341180:CDS 45.0%
ACAGTGAAAGCCTCTCTATC+AGG + chr2_4:62595253-62595272 None:intergenic 45.0%
TTCAAGGTCAGGGAGCCATT+TGG + chr2_4:62593106-62593125 None:intergenic 50.0%
CATCCAAACCAGCTTCAGCA+AGG + chr2_4:62593521-62593540 None:intergenic 50.0%
CTTTCTTGCTTCGACACGCT+TGG + chr2_4:62594719-62594738 None:intergenic 50.0%
AGTAGCTTGAGGAGTCCAAG+TGG - chr2_4:62594896-62594915 Msa0341180:CDS 50.0%
AACACACCACCGTATCCACT+TGG + chr2_4:62594914-62594933 None:intergenic 50.0%
AAGTGGATACGGTGGTGTGT+TGG - chr2_4:62594913-62594932 Msa0341180:CDS 50.0%
TAGAAAGACACCGTGCCTGT+GGG + chr2_4:62594940-62594959 None:intergenic 50.0%
TTAGAAAGACACCGTGCCTG+TGG + chr2_4:62594941-62594960 None:intergenic 50.0%
GCAAGCACAGATGGACAAGA+TGG - chr2_4:62595042-62595061 Msa0341180:CDS 50.0%
TTCAAGGTCAGGGAGCCATT+TGG + chr2_4:62593106-62593125 None:intergenic 50.0%
CATCCAAACCAGCTTCAGCA+AGG + chr2_4:62593521-62593540 None:intergenic 50.0%
CTTTCTTGCTTCGACACGCT+TGG + chr2_4:62594719-62594738 None:intergenic 50.0%
AGTAGCTTGAGGAGTCCAAG+TGG - chr2_4:62594896-62594915 Msa0341180:CDS 50.0%
AACACACCACCGTATCCACT+TGG + chr2_4:62594914-62594933 None:intergenic 50.0%
AAGTGGATACGGTGGTGTGT+TGG - chr2_4:62594913-62594932 Msa0341180:CDS 50.0%
TAGAAAGACACCGTGCCTGT+GGG + chr2_4:62594940-62594959 None:intergenic 50.0%
TTAGAAAGACACCGTGCCTG+TGG + chr2_4:62594941-62594960 None:intergenic 50.0%
GCAAGCACAGATGGACAAGA+TGG - chr2_4:62595042-62595061 Msa0341180:CDS 50.0%
AGGCGAAGGAGGAAGTTGCA+TGG + chr2_4:62593252-62593271 None:intergenic 55.0%
GCTGCATGAAGTGAGGCTTC+TGG + chr2_4:62594782-62594801 None:intergenic 55.0%
AGGAGTCCAAGTGGATACGG+TGG - chr2_4:62594905-62594924 Msa0341180:CDS 55.0%
AGGCGAAGGAGGAAGTTGCA+TGG + chr2_4:62593252-62593271 None:intergenic 55.0%
GCTGCATGAAGTGAGGCTTC+TGG + chr2_4:62594782-62594801 None:intergenic 55.0%
AGGAGTCCAAGTGGATACGG+TGG - chr2_4:62594905-62594924 Msa0341180:CDS 55.0%
GTGTGTTGGACCCACAGGCA+CGG - chr2_4:62594927-62594946 Msa0341180:CDS 60.0%
GTGTGTTGGACCCACAGGCA+CGG - chr2_4:62594927-62594946 Msa0341180:CDS 60.0%
CGGTGGTGTGTTGGACCCAC+AGG - chr2_4:62594922-62594941 Msa0341180:CDS 65.0%
CGGTGGTGTGTTGGACCCAC+AGG - chr2_4:62594922-62594941 Msa0341180:CDS 65.0%
Chromosome Type Strat End Strand Name
chr2_4 gene 62592919 62595291 62592919 ID=Msa0341180;Name=Msa0341180
chr2_4 mRNA 62592919 62595291 62592919 ID=Msa0341180-mRNA-1;Parent=Msa0341180;Name=Msa0341180-mRNA-1;_AED=0.05;_eAED=0.05;_QI=0|0|0|0.66|1|1|3|0|436
chr2_4 exon 62594598 62595291 62594598 ID=Msa0341180-mRNA-1:exon:19964;Parent=Msa0341180-mRNA-1
chr2_4 exon 62593755 62593789 62593755 ID=Msa0341180-mRNA-1:exon:19963;Parent=Msa0341180-mRNA-1
chr2_4 exon 62592919 62593500 62592919 ID=Msa0341180-mRNA-1:exon:19962;Parent=Msa0341180-mRNA-1
chr2_4 CDS 62594598 62595291 62594598 ID=Msa0341180-mRNA-1:cds;Parent=Msa0341180-mRNA-1
chr2_4 CDS 62593755 62593789 62593755 ID=Msa0341180-mRNA-1:cds;Parent=Msa0341180-mRNA-1
chr2_4 CDS 62592919 62593500 62592919 ID=Msa0341180-mRNA-1:cds;Parent=Msa0341180-mRNA-1
Gene Sequence

>Msa0341180

ATGAAGAAACAATGTTACAAAGAACCAGAAACAAGTCCAAACCAACAAGTAACTTTGGAATATTGTTGCTGGTTTGAAGATGCATGCATCCTTGACATGGATTGCTTCATTAAGACCCTTTCAAACATCAAACAAAAAGGTGTTCGTTCCGATTTAATCGGTTCCATCATCACTCACTATGCTTCCAAATGGCTCCCTGACCTTGAAACTTCAAATTCAAATTCAAATGCAAATGCTAATTCACCTGAAAGTGTAACAGCATCATGGATGAAGAAAAGGTTTTTTGTTGAAACCTTAGTCAGTGTTCTTCCACCAGACAAAGATTCCATTCCATGCAACTTCCTCCTTCGCCTTCTTAAAACAGCAAACATGGTTCTTGTTGAGTCTACTTATCGAACCGATCTTGAGAATCAAATTTCATGGCAGTTAGATCAAGCTTCATTGAAAGAACTCATGATACCTTCTTTCAGTCATACTTGTGGGACCCTTTTGGATGTTGAGCTTGTTATTAGGTTGGTTAAGAGGTTTTTGAGTTTGGATCATGATGGAGTTAAAACTGGTGCTGCTTTGGTTAAGGTTGCTAAGTTGGTTGATTGTTACCTTGCTGAAGCTGGTTTGGATGCTAATTTGAGTTTGTCTCAGTTTGTTGCACTTGCTGGTGCTCTTCCTAACCATGCAAGAGCTACTGATGATGATGTCAAAGCTTGGAACTTCCTTCCTTATAGATATGCACATCCAAGCGTGTCGAAGCAAGAAAGAAAAAGTCTGTGTAGGTTGATTGATAGCAGGAAACTCACACCAGAAGCCTCACTTCATGCAGCTCAAAACGAACGGTTGCCTGTGAGAGCTGTTATTCAAGTTCTCTTCTCCGAACAAACGAAACTCAACCGTTACGTTGATTGGAGTGCTTCTTTCAGTAGCTTGAGGAGTCCAAGTGGATACGGTGGTGTGTTGGACCCACAGGCACGGTGTCTTTCTAAGCGCGAAATGAACACACAACAAATGGAGATAAAAAAACTGAAGGAAGACGTTTACAGGCTGCAAAGTCAGTGCAATGTCATGCAAGCACAGATGGACAAGATGGCTGAGAAGAAGAAAAGTTTCTTCAAATGGAAGAAACTTGCTTTTATTAAAAGCATCGGAGAGACGGAGAATGTTGAACAAGATGAAGCTGAAACTGAATTTGGGTTTGGAAGGCAAACACCTATGGACATGAAAACTAGTACTGTGGTCAAAAGTAGGACTCCTCATAAGTGGAAAAATCTCTGTCCTGATAGAGAGGCTTTCACTGTTCGTAACAAAAAAAATTAA

Protein sequence

>Msa0341180

MKKQCYKEPETSPNQQVTLEYCCWFEDACILDMDCFIKTLSNIKQKGVRSDLIGSIITHYASKWLPDLETSNSNSNANANSPESVTASWMKKRFFVETLVSVLPPDKDSIPCNFLLRLLKTANMVLVESTYRTDLENQISWQLDQASLKELMIPSFSHTCGTLLDVELVIRLVKRFLSLDHDGVKTGAALVKVAKLVDCYLAEAGLDANLSLSQFVALAGALPNHARATDDDVKAWNFLPYRYAHPSVSKQERKSLCRLIDSRKLTPEASLHAAQNERLPVRAVIQVLFSEQTKLNRYVDWSASFSSLRSPSGYGGVLDPQARCLSKREMNTQQMEIKKLKEDVYRLQSQCNVMQAQMDKMAEKKKSFFKWKKLAFIKSIGETENVEQDEAETEFGFGRQTPMDMKTSTVVKSRTPHKWKNLCPDREAFTVRNKKN*