AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa1399580

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa1399580 MtrunA17_Chr4g0069611 95.064 466 23 0 1 466 1 466 0.0 927
Msa1399580 MtrunA17_Chr6g0466841 74.514 463 116 2 5 466 8 469 0.0 734
Msa1399580 MtrunA17_Chr6g0466831 74.514 463 116 2 5 466 8 469 0.0 731
Msa1399580 MtrunA17_Chr2g0302851 72.944 462 123 2 6 466 7 467 0.0 716
Msa1399580 MtrunA17_Chr4g0039881 75.676 444 106 2 24 466 1 443 0.0 704
Msa1399580 MtrunA17_Chr2g0278741 70.085 468 130 4 1 461 84 548 0.0 691
Msa1399580 MtrunA17_Chr2g0278721 68.017 469 141 3 1 462 1 467 0.0 672
Msa1399580 MtrunA17_Chr2g0278721 54.545 473 191 8 7 460 509 976 1.85e-179 528
Msa1399580 MtrunA17_Chr6g0464091 67.155 478 143 4 1 466 1 476 0.0 667
Msa1399580 MtrunA17_Chr6g0477011 72.277 303 82 1 4 306 5 305 2.89e-162 461
Msa1399580 MtrunA17_Chr3g0092031 79.803 203 41 0 264 466 1 203 4.69e-120 349
Msa1399580 MtrunA17_Chr7g0241801 40.879 455 231 9 12 460 6 428 3.49e-116 348
Msa1399580 MtrunA17_Chr8g0367221 40.173 463 252 7 12 457 9 463 2.15e-110 358
Msa1399580 MtrunA17_Chr8g0367221 39.093 463 260 7 12 458 1285 1741 2.46e-107 349
Msa1399580 MtrunA17_Chr8g0367221 38.961 462 254 8 12 454 795 1247 2.61e-103 338
Msa1399580 MtrunA17_Chr7g0241781 39.262 461 242 9 10 464 4 432 2.86e-108 327
Msa1399580 MtrunA17_Chr3g0092021 79.429 175 35 1 5 178 8 182 3.68e-98 292
Msa1399580 MtrunA17_Chr8g0336251 35.076 459 283 6 14 458 6 463 1.69e-90 283
Msa1399580 MtrunA17_Chr8g0336321 35.076 459 283 6 14 458 6 463 3.49e-90 282
Msa1399580 MtrunA17_Chr4g0040711 34.632 462 276 14 13 459 6 456 3.30e-74 240
Msa1399580 MtrunA17_Chr4g0040691 35.484 465 268 15 13 459 6 456 3.01e-73 238
Msa1399580 MtrunA17_Chr2g0283041 33.043 460 279 12 14 457 6 452 1.81e-69 228
Msa1399580 MtrunA17_Chr1g0196851 30.480 479 295 10 1 458 35 496 5.92e-68 225
Msa1399580 MtrunA17_Chr4g0029131 32.328 464 277 12 14 458 11 456 8.08e-66 223
Msa1399580 MtrunA17_Chr4g0029131 32.867 143 91 3 14 156 469 606 1.48e-17 85.5
Msa1399580 MtrunA17_Chr2g0319791 33.117 462 279 15 13 457 6 454 1.47e-62 210
Msa1399580 MtrunA17_Chr2g0319761 32.911 474 274 17 9 458 2 455 6.63e-62 208
Msa1399580 MtrunA17_Chr4g0029151 30.736 462 287 13 14 458 19 464 2.95e-61 207
Msa1399580 MtrunA17_Chr4g0029161 29.828 466 258 15 14 458 11 428 5.51e-55 189
Msa1399580 MtrunA17_Chr2g0319751 31.749 463 284 17 13 457 483 931 4.30e-53 192
Msa1399580 MtrunA17_Chr2g0319751 28.416 461 278 14 13 457 6 430 6.75e-48 177
Msa1399580 MtrunA17_Chr2g0319731 31.489 470 278 14 14 459 24 473 6.25e-52 182
Msa1399580 MtrunA17_Chr2g0319801 30.901 466 286 15 14 459 7 456 1.20e-51 181
Msa1399580 MtrunA17_Chr4g0014061 30.670 463 262 15 12 436 6 447 7.30e-49 174
Msa1399580 MtrunA17_Chr5g0427571 36.364 286 171 5 183 458 13 297 1.03e-48 169
Msa1399580 MtrunA17_Chr8g0374941 27.673 477 265 16 12 437 8 455 2.94e-44 166
Msa1399580 MtrunA17_Chr8g0374941 28.106 491 267 18 1 437 935 1393 1.97e-43 164
Msa1399580 MtrunA17_Chr8g0374941 27.000 500 279 18 12 458 473 939 8.80e-40 153
Msa1399580 MtrunA17_Chr8g0350881 28.283 495 267 18 5 446 2 461 5.89e-44 161
Msa1399580 MtrunA17_Chr8g0374931 28.132 455 293 11 12 437 8 457 8.45e-44 160
Msa1399580 MtrunA17_Chr2g0294921 28.416 461 294 11 12 444 157 609 5.77e-43 160
Msa1399580 MtrunA17_Chr4g0066221 27.412 456 294 12 12 437 8 456 3.37e-42 156
Msa1399580 MtrunA17_Chr4g0066261 28.509 456 290 13 12 437 8 457 4.68e-42 155
Msa1399580 MtrunA17_Chr2g0294931 28.817 465 277 15 12 437 8 457 1.07e-41 155
Msa1399580 MtrunA17_Chr8g0374901 26.653 484 273 14 5 437 2 454 1.56e-41 154
Msa1399580 MtrunA17_Chr4g0044511 29.221 462 282 17 6 437 34 480 3.88e-41 153
Msa1399580 MtrunA17_Chr5g0410941 26.211 454 299 13 12 437 20 465 5.82e-41 153
Msa1399580 MtrunA17_Chr7g0218311 27.632 456 291 13 12 437 13 459 8.35e-41 152
Msa1399580 MtrunA17_Chr8g0374971 28.112 466 291 15 5 437 2 456 2.86e-40 150
Msa1399580 MtrunA17_Chr7g0243631 27.115 461 289 14 14 437 12 462 6.95e-40 150
Msa1399580 MtrunA17_Chr8g0335161 28.289 456 283 13 12 438 3 443 7.76e-40 149
Msa1399580 MtrunA17_Chr8g0366391 27.494 451 291 10 13 434 7 450 2.93e-39 148
Msa1399580 MtrunA17_Chr6g0463851 25.439 456 305 12 12 437 8 458 3.14e-39 148
Msa1399580 MtrunA17_Chr7g0243681 27.542 472 270 16 14 438 10 456 4.90e-39 147
Msa1399580 MtrunA17_Chr6g0486251 29.759 457 261 16 16 436 7 439 6.13e-39 147
Msa1399580 MtrunA17_Chr6g0486201 29.759 457 261 16 16 436 7 439 6.13e-39 147
Msa1399580 MtrunA17_Chr4g0066151 26.882 465 289 13 7 438 10 456 3.90e-38 145
Msa1399580 MtrunA17_Chr5g0428081 26.667 465 285 14 12 437 8 455 4.39e-38 144
Msa1399580 MtrunA17_Chr6g0459311 28.444 450 276 12 16 436 14 446 4.81e-38 144
Msa1399580 MtrunA17_Chr4g0066201 26.258 457 285 13 12 437 15 450 8.20e-38 144
Msa1399580 MtrunA17_Chr8g0335141 28.821 458 278 14 10 437 5 444 1.02e-37 143
Msa1399580 MtrunA17_Chr4g0066131 25.591 465 295 13 6 437 4 450 1.46e-37 143
Msa1399580 MtrunA17_Chr5g0419761 27.660 470 283 15 12 438 6 461 2.03e-37 143
Msa1399580 MtrunA17_Chr7g0243771 26.952 397 263 10 14 390 5 394 4.34e-36 139
Msa1399580 MtrunA17_Chr4g0066171 25.495 455 290 14 12 437 18 452 6.40e-36 139
Msa1399580 MtrunA17_Chr8g0361371 28.172 465 263 17 16 436 8 445 8.54e-36 138
Msa1399580 MtrunA17_Chr8g0369341 30.952 420 238 17 15 399 7 409 1.51e-35 137
Msa1399580 MtrunA17_Chr5g0440421 27.586 464 278 17 7 426 3 452 2.52e-35 137
Msa1399580 MtrunA17_Chr7g0243951 26.407 462 292 15 14 438 10 460 2.96e-35 137
Msa1399580 MtrunA17_Chr7g0243801 25.164 457 305 13 12 438 4 453 3.07e-35 137
Msa1399580 MtrunA17_Chr5g0414321 27.088 443 289 11 7 435 3 425 5.52e-35 135
Msa1399580 MtrunA17_Chr8g0336691 27.511 458 284 13 10 436 914 1354 6.81e-35 139
Msa1399580 MtrunA17_Chr8g0336691 28.018 439 278 12 10 436 475 887 1.24e-32 132
Msa1399580 MtrunA17_Chr8g0336691 27.646 463 287 13 6 436 2 448 1.26e-32 132
Msa1399580 MtrunA17_Chr7g0243761 24.775 444 299 12 13 429 9 444 1.29e-34 134
Msa1399580 MtrunA17_Chr8g0339631 33.603 247 144 4 206 436 201 443 3.92e-34 133
Msa1399580 MtrunA17_Chr5g0420801 29.782 413 242 14 15 399 7 399 4.27e-34 133
Msa1399580 MtrunA17_Chr8g0336741 27.051 451 285 13 14 436 12 446 7.23e-34 132
Msa1399580 MtrunA17_Chr6g0464921 24.009 454 304 15 5 439 2 433 1.20e-33 132
Msa1399580 MtrunA17_Chr8g0347281 28.194 454 274 14 13 436 16 447 1.37e-33 132
Msa1399580 MtrunA17_Chr7g0232411 32.000 250 149 6 206 439 199 443 2.30e-33 131
Msa1399580 MtrunA17_Chr6g0463861 23.736 455 305 12 12 437 8 449 3.07e-33 131
Msa1399580 MtrunA17_Chr8g0355221 26.901 513 284 23 14 466 14 495 4.49e-33 130
Msa1399580 MtrunA17_Chr3g0098111 29.374 463 275 17 1 433 1 441 4.77e-33 130
Msa1399580 MtrunA17_Chr5g0419771 28.172 465 285 17 14 437 35 491 5.02e-33 131
Msa1399580 MtrunA17_Chr5g0414331 27.416 445 286 13 5 435 6 427 5.43e-33 130
Msa1399580 MtrunA17_Chr1g0179901 27.673 477 278 18 1 431 7 462 5.60e-33 130
Msa1399580 MtrunA17_Chr4g0044501 26.374 455 288 13 13 434 8 448 5.71e-33 130
Msa1399580 MtrunA17_Chr7g0243781 25.658 456 299 14 12 437 6 451 6.18e-33 130
Msa1399580 MtrunA17_Chr7g0243931 24.947 469 310 14 2 436 5 465 6.45e-33 130
Msa1399580 MtrunA17_Chr7g0232341 27.669 459 277 17 12 436 3 440 7.06e-33 130
Msa1399580 MtrunA17_Chr7g0265141 28.747 407 246 13 15 390 9 402 8.02e-33 130
Msa1399580 MtrunA17_Chr7g0232401 33.061 245 144 5 207 436 203 442 1.08e-32 129
Msa1399580 MtrunA17_Chr4g0066281 26.327 452 285 14 12 435 9 440 1.39e-32 129
Msa1399580 MtrunA17_Chr8g0334831 27.859 481 252 18 16 436 7 452 1.97e-32 129
Msa1399580 MtrunA17_Chr7g0243861 25.728 412 278 10 1 390 1 406 2.48e-32 129
Msa1399580 MtrunA17_Chr4g0060511 25.163 461 303 13 14 438 10 464 2.79e-32 129
Msa1399580 MtrunA17_Chr6g0464881 26.087 437 284 14 15 433 11 426 4.11e-32 127
Msa1399580 MtrunA17_Chr7g0265041 27.069 447 282 14 15 425 11 449 5.18e-32 127
Msa1399580 MtrunA17_Chr8g0336651 26.696 457 291 12 10 436 776 1218 6.96e-32 129
Msa1399580 MtrunA17_Chr8g0336651 37.234 188 105 1 268 442 258 445 8.86e-29 120
Msa1399580 MtrunA17_Chr8g0336651 30.603 232 137 4 207 436 540 749 3.52e-24 106
Msa1399580 MtrunA17_Chr7g0232391 32.922 243 142 6 213 439 206 443 7.71e-32 127
Msa1399580 MtrunA17_Chr3g0078841 27.430 463 286 19 9 436 5 452 7.79e-32 127
Msa1399580 MtrunA17_Chr4g0044481 27.062 388 250 7 15 392 27 391 1.04e-31 125
Msa1399580 MtrunA17_Chr7g0265051 27.273 429 275 16 14 410 8 431 1.18e-31 127
Msa1399580 MtrunA17_Chr5g0403641 34.821 224 122 4 231 435 258 476 1.45e-31 127
Msa1399580 MtrunA17_Chr7g0232311 29.469 414 225 13 50 438 69 440 1.78e-31 125
Msa1399580 MtrunA17_Chr1g0153461 38.251 183 97 3 269 436 6 187 3.82e-31 119
Msa1399580 MtrunA17_Chr1g0207971 28.446 457 258 19 14 436 7 428 5.43e-31 124
Msa1399580 MtrunA17_Chr7g0275681 27.373 453 289 14 15 436 12 455 5.48e-31 124
Msa1399580 MtrunA17_Chr7g0275511 27.352 457 280 15 13 436 13 450 5.81e-31 124
Msa1399580 MtrunA17_Chr8g0347271 27.212 452 281 14 13 436 17 448 1.52e-30 123
Msa1399580 MtrunA17_Chr2g0294941 33.043 230 129 8 246 451 140 368 1.74e-30 121
Msa1399580 MtrunA17_Chr8g0336731 36.813 182 102 1 268 436 284 465 2.05e-30 123
Msa1399580 MtrunA17_Chr8g0339451 32.932 249 146 5 206 436 193 438 2.23e-30 122
Msa1399580 MtrunA17_Chr1g0153451 31.707 246 145 4 207 436 200 438 3.36e-30 122
Msa1399580 MtrunA17_Chr6g0454341 26.439 469 286 22 9 436 2 452 4.50e-30 122
Msa1399580 MtrunA17_Chr1g0161351 27.766 461 251 20 14 426 36 462 5.31e-30 122
Msa1399580 MtrunA17_Chr8g0339601 32.129 249 148 5 206 436 60 305 6.31e-30 119
Msa1399580 MtrunA17_Chr7g0232331 26.974 456 284 16 12 436 3 440 6.89e-30 121
Msa1399580 MtrunA17_Chr2g0329111 26.096 456 291 18 16 436 7 451 6.90e-30 121
Msa1399580 MtrunA17_Chr6g0454401 26.407 462 295 17 9 436 5 455 7.88e-30 121
Msa1399580 MtrunA17_Chr5g0401851 26.141 482 265 20 14 436 9 458 9.11e-30 121
Msa1399580 MtrunA17_Chr6g0464871 25.793 473 298 18 15 460 23 469 1.02e-29 120
Msa1399580 MtrunA17_Chr8g0370941 27.549 461 276 14 11 426 4 451 1.68e-29 120
Msa1399580 MtrunA17_Chr7g0243871 25.431 464 285 18 12 436 6 447 2.08e-29 120
Msa1399580 MtrunA17_Chr8g0336331 25.918 463 295 17 9 436 2 451 4.48e-29 119
Msa1399580 MtrunA17_Chr7g0265151 25.910 467 290 16 14 438 8 460 4.98e-29 119
Msa1399580 MtrunA17_Chr8g0373301 33.468 248 139 6 206 436 203 441 6.49e-29 118
Msa1399580 MtrunA17_Chr1g0207861 27.679 448 269 14 1 417 1 424 7.96e-29 118
Msa1399580 MtrunA17_Chr6g0449931 27.632 380 243 10 85 438 72 445 8.11e-29 118
Msa1399580 MtrunA17_Chr8g0339441 36.559 186 99 3 269 436 220 404 8.65e-29 117
Msa1399580 MtrunA17_Chr8g0382021 32.780 241 137 8 216 438 232 465 9.81e-29 118
Msa1399580 MtrunA17_Chr7g0235051 24.946 461 270 17 14 438 10 430 1.32e-28 117
Msa1399580 MtrunA17_Chr8g0334861 28.739 341 218 7 113 434 102 436 1.68e-28 117
Msa1399580 MtrunA17_Chr6g0464841 24.792 480 311 17 5 459 2 456 2.31e-28 117
Msa1399580 MtrunA17_Chr5g0442561 34.510 255 134 10 207 436 201 447 2.40e-28 117
Msa1399580 MtrunA17_Chr3g0079731 35.593 236 121 6 238 447 245 475 3.06e-28 117
Msa1399580 MtrunA17_Chr4g0044521 25.369 406 274 11 14 403 8 400 3.65e-28 116
Msa1399580 MtrunA17_Chr1g0207981 25.110 454 308 13 6 436 3 447 6.22e-28 115
Msa1399580 MtrunA17_Chr1g0207931 34.649 228 138 7 215 433 244 469 8.81e-28 115
Msa1399580 MtrunA17_Chr6g0464861 24.477 478 314 16 5 459 2 455 9.63e-28 115
Msa1399580 MtrunA17_Chr8g0339461 31.020 245 148 5 212 438 207 448 1.07e-27 115
Msa1399580 MtrunA17_Chr6g0454301 25.000 464 299 16 9 436 255 705 1.15e-27 116
Msa1399580 MtrunA17_Chr6g0454301 28.977 176 116 4 264 436 35 204 7.29e-17 83.6
Msa1399580 MtrunA17_Chr1g0165701 25.270 463 288 18 14 436 14 458 1.29e-27 115
Msa1399580 MtrunA17_Chr7g0265101 26.559 433 275 16 14 410 8 433 1.31e-27 115
Msa1399580 MtrunA17_Chr4g0011051 27.463 477 272 21 14 437 8 463 1.35e-27 115
Msa1399580 MtrunA17_Chr1g0159551 29.461 241 143 5 216 438 205 436 1.44e-27 114
Msa1399580 MtrunA17_Chr7g0249931 24.390 492 279 19 5 440 30 484 3.12e-27 114
Msa1399580 MtrunA17_Chr6g0462521 32.051 234 149 4 204 431 191 420 3.22e-27 113
Msa1399580 MtrunA17_Chr4g0072761 39.264 163 93 3 269 431 266 422 3.47e-27 113
Msa1399580 MtrunA17_Chr6g0462551 29.425 435 230 19 16 404 5 408 4.94e-27 113
Msa1399580 MtrunA17_Chr1g0207831 33.884 242 133 10 204 433 209 435 5.26e-27 113
Msa1399580 MtrunA17_Chr2g0302961 27.047 403 256 14 23 399 13 403 6.82e-27 112
Msa1399580 MtrunA17_Chr2g0307961 25.701 428 285 12 15 416 13 433 7.22e-27 112
Msa1399580 MtrunA17_Chr2g0321331 29.333 300 156 9 167 459 15 265 7.47e-27 109
Msa1399580 MtrunA17_Chr1g0173121 29.200 250 151 7 206 438 199 439 1.45e-26 112
Msa1399580 MtrunA17_Chr5g0442491 33.992 253 130 12 211 436 207 449 1.59e-26 112
Msa1399580 MtrunA17_Chr5g0448521 26.327 490 247 20 12 436 2 442 1.79e-26 111
Msa1399580 MtrunA17_Chr2g0302991 29.268 328 206 11 91 399 80 400 2.24e-26 111
Msa1399580 MtrunA17_Chr6g0462531 25.225 444 290 11 16 431 5 434 3.63e-26 110
Msa1399580 MtrunA17_Chr8g0361411 25.576 434 285 11 15 424 8 427 4.28e-26 110
Msa1399580 MtrunA17_Chr6g0454331 24.516 465 290 16 15 436 7 453 4.45e-26 110
Msa1399580 MtrunA17_Chr1g0207951 33.766 231 144 5 207 433 855 1080 5.63e-26 112
Msa1399580 MtrunA17_Chr1g0207951 26.889 450 277 14 10 433 119 542 1.41e-25 110
Msa1399580 MtrunA17_Chr7g0250001 25.223 448 292 14 14 442 5 428 7.56e-26 109
Msa1399580 MtrunA17_Chr5g0409591 22.634 486 291 11 16 442 5 464 1.23e-25 109
Msa1399580 MtrunA17_Chr4g0072771 38.788 165 93 4 268 431 278 435 1.79e-25 108
Msa1399580 MtrunA17_Chr6g0462571 26.726 449 284 14 16 436 5 436 1.81e-25 108
Msa1399580 MtrunA17_Chr5g0442521 32.661 248 140 8 212 436 207 450 2.64e-25 108
Msa1399580 MtrunA17_Chr6g0454151 29.682 283 177 12 163 436 183 452 2.83e-25 108
Msa1399580 MtrunA17_Chr6g0453951 23.593 462 305 15 10 436 53 501 3.29e-25 108
Msa1399580 MtrunA17_Chr7g0243811 24.679 389 242 12 29 390 3 367 4.10e-25 106
Msa1399580 MtrunA17_Chr4g0032331 24.229 454 275 17 16 436 9 426 4.44e-25 107
Msa1399580 MtrunA17_Chr6g0462541 35.057 174 106 3 269 436 266 438 5.68e-25 107
Msa1399580 MtrunA17_Chr8g0334851 26.531 343 209 9 133 447 128 455 5.76e-25 107
Msa1399580 MtrunA17_Chr7g0232351 35.429 175 93 3 212 371 205 374 7.82e-25 105
Msa1399580 MtrunA17_Chr8g0365811 33.740 246 138 9 204 433 211 447 9.67e-25 108
Msa1399580 MtrunA17_Chr8g0365811 26.339 448 292 14 13 433 493 929 1.11e-24 107
Msa1399580 MtrunA17_Chr5g0401721 32.000 200 123 3 269 456 275 473 1.30e-24 106
Msa1399580 MtrunA17_Chr7g0243911 31.841 201 123 5 251 437 6 206 1.55e-24 101
Msa1399580 MtrunA17_Chr5g0442511 33.074 257 139 12 206 437 221 469 1.56e-24 106
Msa1399580 MtrunA17_Chr6g0454181 23.861 461 296 18 15 436 10 454 1.59e-24 105
Msa1399580 MtrunA17_Chr5g0427581 33.103 145 94 1 18 159 1 145 1.62e-24 99.4
Msa1399580 MtrunA17_Chr7g0243611 39.683 126 72 2 269 390 138 263 1.63e-24 103
Msa1399580 MtrunA17_Chr3g0118771 24.899 494 314 18 8 460 14 491 1.72e-24 105
Msa1399580 MtrunA17_Chr5g0442541 34.630 257 133 11 206 436 193 440 1.76e-24 105
Msa1399580 MtrunA17_Chr7g0243851 23.348 454 275 15 14 438 10 419 2.22e-24 105
Msa1399580 MtrunA17_Chr3g0112771 30.973 226 144 5 216 436 208 426 2.24e-24 105
Msa1399580 MtrunA17_Chr6g0463891 23.313 489 297 15 1 437 1 463 2.63e-24 105
Msa1399580 MtrunA17_Chr6g0454321 24.249 466 300 18 9 436 2 452 3.22e-24 105
Msa1399580 MtrunA17_Chr6g0454141 23.094 459 302 16 15 436 10 454 3.27e-24 105
Msa1399580 MtrunA17_Chr6g0452771 26.226 469 275 18 15 436 10 454 6.22e-24 104
Msa1399580 MtrunA17_Chr7g0243711 32.609 184 110 5 269 438 110 293 9.69e-24 101
Msa1399580 MtrunA17_Chr6g0454191 24.839 467 285 19 15 436 10 455 1.09e-23 103
Msa1399580 MtrunA17_Chr5g0416741 22.961 466 317 14 4 436 2 458 1.24e-23 103
Msa1399580 MtrunA17_Chr4g0042931 26.866 402 257 12 14 391 6 394 1.34e-23 103
Msa1399580 MtrunA17_Chr3g0122001 24.348 460 289 14 15 434 6 446 2.51e-23 103
Msa1399580 MtrunA17_Chr3g0122001 29.302 215 134 6 236 433 711 924 5.68e-19 90.1
Msa1399580 MtrunA17_Chr8g0359821 24.034 466 287 15 15 436 10 452 2.56e-23 102
Msa1399580 MtrunA17_Chr3g0092641 24.276 449 298 14 15 433 12 448 2.72e-23 102
Msa1399580 MtrunA17_Chr7g0249961 30.500 200 127 5 241 433 37 231 2.98e-23 99.0
Msa1399580 MtrunA17_Chr2g0278711 26.039 457 292 17 9 433 6 448 4.30e-23 101
Msa1399580 MtrunA17_Chr7g0249981 29.130 230 153 5 238 462 247 471 6.02e-23 101
Msa1399580 MtrunA17_Chr6g0453961 22.876 459 304 15 15 436 19 464 6.91e-23 101
Msa1399580 MtrunA17_Chr6g0454271 30.932 236 136 9 215 436 39 261 8.45e-23 98.2
Msa1399580 MtrunA17_Chr8g0377921 32.243 214 126 6 236 434 227 436 1.19e-22 100
Msa1399580 MtrunA17_Chr6g0454361 24.670 454 301 16 15 436 11 455 1.23e-22 100
Msa1399580 MtrunA17_Chr3g0118661 28.058 417 242 17 15 390 13 412 1.65e-22 100
Msa1399580 MtrunA17_Chr6g0454201 30.833 240 137 9 212 436 230 455 1.93e-22 99.8
Msa1399580 MtrunA17_Chr3g0118691 24.190 463 278 18 15 430 15 451 4.04e-22 99.0
Msa1399580 MtrunA17_Chr6g0454291 31.356 236 135 8 215 436 229 451 4.37e-22 98.6
Msa1399580 MtrunA17_Chr8g0380531 23.725 451 299 17 7 434 2 430 4.37e-22 98.6
Msa1399580 MtrunA17_Chr5g0426431 25.055 455 287 15 15 433 12 448 4.47e-22 98.6
Msa1399580 MtrunA17_Chr8g0377941 29.596 223 145 6 214 433 220 433 4.81e-22 98.6
Msa1399580 MtrunA17_Chr5g0442601 31.076 251 138 10 212 436 609 850 5.03e-22 99.8
Msa1399580 MtrunA17_Chr5g0442601 32.704 159 89 3 239 383 164 318 1.36e-16 82.8
Msa1399580 MtrunA17_Chr5g0423981 30.894 246 147 9 212 447 194 426 5.16e-22 98.2
Msa1399580 MtrunA17_Chr3g0079711 36.667 180 88 6 294 447 4 183 6.25e-22 93.2
Msa1399580 MtrunA17_Chr7g0218831 24.228 421 289 12 15 425 6 406 7.59e-22 97.8
Msa1399580 MtrunA17_Chr4g0050341 24.017 458 301 17 15 436 19 465 1.23e-21 97.4
Msa1399580 MtrunA17_Chr5g0442581 30.488 246 140 10 216 436 212 451 1.23e-21 97.8
Msa1399580 MtrunA17_Chr6g0454221 32.386 176 110 4 264 436 36 205 1.34e-21 95.1
Msa1399580 MtrunA17_Chr3g0112761 24.130 460 268 17 12 433 5 421 1.64e-21 97.1
Msa1399580 MtrunA17_Chr4g0053321 31.381 239 140 8 238 455 246 481 1.73e-21 97.1
Msa1399580 MtrunA17_Chr5g0416821 24.444 405 257 16 12 385 11 397 2.23e-21 96.7
Msa1399580 MtrunA17_Chr3g0121991 31.797 217 128 8 236 434 304 518 2.34e-21 97.1
Msa1399580 MtrunA17_Chr7g0217881 33.143 175 108 5 265 436 268 436 4.48e-21 95.5
Msa1399580 MtrunA17_Chr4g0042891 37.037 162 89 5 238 391 240 396 5.83e-21 95.5
Msa1399580 MtrunA17_Chr6g0454121 29.181 281 169 10 170 436 189 453 6.07e-21 95.5
Msa1399580 MtrunA17_Chr7g0265111 41.935 124 66 2 265 383 304 426 6.19e-21 95.5
Msa1399580 MtrunA17_Chr5g0431441 21.778 450 297 14 15 436 18 440 8.53e-21 94.7
Msa1399580 MtrunA17_Chr7g0218841 23.697 422 291 12 15 425 6 407 9.41e-21 94.4
Msa1399580 MtrunA17_Chr6g0454131 28.929 280 161 11 170 431 189 448 1.26e-20 94.4
Msa1399580 MtrunA17_Chr5g0431361 22.737 453 291 16 15 440 12 432 1.41e-20 94.0
Msa1399580 MtrunA17_Chr3g0118701 30.738 244 140 10 203 430 221 451 2.91e-20 93.2
Msa1399580 MtrunA17_Chr3g0118711 30.172 232 140 9 212 430 227 449 3.31e-20 93.2
Msa1399580 MtrunA17_Chr6g0454211 23.965 459 298 15 15 436 297 741 4.01e-20 93.6
Msa1399580 MtrunA17_Chr4g0053501 30.882 204 123 5 268 455 265 466 6.84e-20 92.4
Msa1399580 MtrunA17_Chr3g0106251 27.074 229 154 5 212 436 49 268 8.29e-20 90.1
Msa1399580 MtrunA17_Chr5g0431401 21.795 468 308 15 15 453 10 448 9.68e-20 91.7
Msa1399580 MtrunA17_Chr3g0118721 27.636 275 159 12 212 462 36 294 2.10e-19 88.6
Msa1399580 MtrunA17_Chr3g0106231 22.989 435 296 15 15 436 18 426 2.23e-19 90.5
Msa1399580 MtrunA17_Chr5g0429681 33.168 202 122 9 216 407 249 447 3.03e-19 90.1
Msa1399580 MtrunA17_Chr5g0412111 24.337 415 255 15 15 392 5 397 3.75e-19 89.7
Msa1399580 MtrunA17_Chr5g0412131 25.062 403 268 14 15 392 12 405 3.83e-19 89.7
Msa1399580 MtrunA17_Chr7g0218811 32.911 158 102 3 269 425 262 416 5.11e-19 89.4
Msa1399580 MtrunA17_Chr5g0431371 21.769 441 299 14 15 436 10 423 5.55e-19 89.4
Msa1399580 MtrunA17_Chr4g0063711 60.870 69 26 1 87 155 1 68 6.07e-19 80.9
Msa1399580 MtrunA17_Chr5g0393591 36.628 172 85 5 216 383 223 374 6.31e-19 89.0
Msa1399580 MtrunA17_Chr7g0218791 23.266 447 268 15 15 424 5 413 9.13e-19 88.6
Msa1399580 MtrunA17_Chr6g0454261 23.043 460 301 18 15 436 10 454 1.12e-18 88.6
Msa1399580 MtrunA17_Chr5g0426401 29.787 235 141 8 212 433 58 281 1.31e-18 86.7
Msa1399580 MtrunA17_Chr8g0355011 31.892 185 107 7 254 431 159 331 2.00e-18 86.7
Msa1399580 MtrunA17_Chr5g0431421 21.946 442 297 15 15 436 10 423 2.28e-18 87.4
Msa1399580 MtrunA17_Chr5g0412101 24.816 407 265 15 15 392 12 406 6.05e-18 86.3
Msa1399580 MtrunA17_Chr5g0432731 26.697 221 153 5 212 430 49 262 8.13e-18 84.0
Msa1399580 MtrunA17_Chr6g0454171 29.752 242 125 10 212 436 71 284 8.74e-18 84.0
Msa1399580 MtrunA17_Chr7g0218821 23.707 464 300 15 15 447 5 445 1.24e-17 85.1
Msa1399580 MtrunA17_Chr6g0454351 21.806 454 310 16 8 436 6 439 2.37e-17 84.3
Msa1399580 MtrunA17_Chr5g0429711 28.571 252 154 12 193 431 194 432 2.53e-17 84.3
Msa1399580 MtrunA17_Chr3g0118671 28.125 192 117 6 264 442 278 461 2.75e-17 84.3
Msa1399580 MtrunA17_Chr6g0454251 24.433 397 247 14 15 371 7 390 6.28e-17 82.4
Msa1399580 MtrunA17_Chr7g0231631 27.273 187 100 6 216 380 11 183 8.23e-16 77.4
Msa1399580 MtrunA17_Chr5g0448551 34.969 163 89 8 269 425 262 413 1.39e-14 75.9
Msa1399580 MtrunA17_Chr5g0431431 25.532 188 128 4 212 398 153 329 1.67e-14 74.7
Msa1399580 MtrunA17_Chr8g0357361 27.692 195 136 4 216 406 65 258 6.49e-14 72.0
Msa1399580 MtrunA17_Chr6g0482061 25.773 194 131 3 215 397 225 416 8.38e-13 70.1
Msa1399580 MtrunA17_Chr4g0066141 33.333 129 74 4 322 438 200 328 3.56e-12 67.8
Msa1399580 MtrunA17_Chr2g0279741 37.755 98 57 2 239 336 8 101 3.82e-12 63.9
Msa1399580 MtrunA17_Chr8g0336261 31.618 136 80 5 294 424 6 133 1.42e-11 62.0
Msa1399580 MtrunA17_Chr8g0337381 38.636 88 52 2 339 425 5 91 3.11e-11 60.8
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa1399580 AT2G22590.1 40.295 474 266 6 1 461 1 470 1.18e-127 379
Msa1399580 AT5G65550.1 38.829 461 258 9 14 458 8 460 1.65e-114 345
Msa1399580 AT5G49690.1 39.474 456 253 7 14 458 9 452 6.45e-113 340
Msa1399580 AT3G29630.1 33.047 466 277 14 14 466 5 448 9.60e-67 221
Msa1399580 AT4G27570.1 32.527 455 281 13 14 458 6 444 1.43e-63 213
Msa1399580 AT2G22930.1 31.887 461 279 13 14 462 5 442 3.44e-63 211
Msa1399580 AT4G27560.1 32.819 454 281 13 14 458 6 444 3.48e-63 212
Msa1399580 AT5G53990.1 31.637 452 284 10 14 458 5 438 3.00e-62 209
Msa1399580 AT1G64910.1 31.798 456 278 13 14 458 5 438 4.92e-62 208
Msa1399580 AT3G29630.2 32.403 466 254 15 14 466 5 422 7.14e-61 205
Msa1399580 AT5G54010.1 31.729 457 285 14 14 459 5 445 2.35e-58 199
Msa1399580 AT1G64920.1 30.937 459 282 16 14 458 5 442 3.60e-58 198
Msa1399580 AT4G09500.2 30.803 461 284 13 14 462 5 442 6.07e-58 197
Msa1399580 AT1G50580.1 31.223 458 279 16 14 458 5 439 1.39e-54 189
Msa1399580 AT5G54060.1 29.895 475 285 16 1 450 4 455 2.98e-53 186
Msa1399580 AT4G09500.1 28.850 461 268 13 14 462 5 417 2.76e-49 174
Msa1399580 AT4G34135.1 26.292 445 284 12 12 422 8 442 1.82e-41 154
Msa1399580 AT4G34131.1 25.462 487 309 15 12 459 7 478 3.06e-41 154
Msa1399580 AT2G36780.1 28.539 445 289 14 3 426 2 438 6.57e-40 150
Msa1399580 AT2G36760.1 27.982 436 283 14 13 426 12 438 2.72e-39 149
Msa1399580 AT2G15490.3 27.332 461 293 14 10 437 2 453 4.66e-39 147
Msa1399580 AT2G15490.1 26.724 464 295 13 10 437 2 456 2.23e-38 145
Msa1399580 AT3G53150.1 27.957 465 282 18 12 435 19 471 8.90e-37 142
Msa1399580 AT2G15480.1 26.915 457 292 15 14 437 9 456 9.91e-37 141
Msa1399580 AT2G16890.2 27.922 462 262 16 15 435 9 440 1.11e-36 141
Msa1399580 AT2G36800.1 26.850 473 295 18 6 438 3 464 3.06e-36 140
Msa1399580 AT3G50740.1 27.742 465 269 14 15 436 7 447 4.10e-36 139
Msa1399580 AT2G36770.1 28.678 401 257 14 13 390 12 406 7.19e-36 139
Msa1399580 AT2G36750.1 27.273 462 252 17 13 426 8 433 1.90e-35 137
Msa1399580 AT4G34138.1 26.638 458 289 14 14 437 10 454 2.74e-35 137
Msa1399580 AT2G15480.2 26.742 445 284 15 14 425 9 444 4.52e-35 137
Msa1399580 AT5G12890.1 28.298 470 270 18 12 436 7 454 3.69e-34 134
Msa1399580 AT1G10400.1 26.623 462 288 15 14 446 6 445 8.00e-34 133
Msa1399580 AT5G59590.1 27.494 451 278 16 7 436 2 424 2.44e-33 131
Msa1399580 AT3G53160.1 27.254 477 288 21 13 446 6 466 3.16e-33 131
Msa1399580 AT1G05680.1 27.064 436 286 15 15 434 6 425 3.37e-33 130
Msa1399580 AT1G51210.1 27.983 461 266 17 5 437 11 433 4.73e-33 130
Msa1399580 AT3G46650.1 25.858 437 264 15 15 433 10 404 8.81e-33 129
Msa1399580 AT1G07250.1 27.887 459 287 17 12 438 3 449 9.25e-33 130
Msa1399580 AT2G16890.3 27.907 430 243 15 15 407 9 408 2.51e-32 128
Msa1399580 AT2G29730.1 25.210 476 311 17 12 455 2 464 5.22e-32 127
Msa1399580 AT2G18570.1 27.729 458 274 14 15 436 5 441 8.40e-32 127
Msa1399580 AT2G31790.1 28.540 452 265 17 15 436 8 431 9.80e-32 127
Msa1399580 AT1G73880.1 27.670 412 267 14 7 398 6 406 2.11e-31 126
Msa1399580 AT1G05675.1 26.879 439 283 15 15 434 6 425 4.07e-31 125
Msa1399580 AT4G01070.1 33.198 247 144 3 206 436 201 442 5.43e-31 125
Msa1399580 AT2G36790.1 26.681 461 294 15 13 437 11 463 5.88e-31 125
Msa1399580 AT5G03490.1 27.045 440 290 13 3 425 9 434 1.39e-30 124
Msa1399580 AT1G01420.1 27.291 491 270 18 15 451 8 465 3.19e-30 123
Msa1399580 AT1G01420.2 27.291 491 270 18 15 451 11 468 3.49e-30 122
Msa1399580 AT4G36770.1 27.158 475 255 16 14 436 3 438 8.22e-30 121
Msa1399580 AT5G26310.1 26.932 453 281 14 15 436 7 440 1.95e-29 120
Msa1399580 AT5G59580.1 25.740 439 284 14 15 436 9 422 3.16e-29 119
Msa1399580 AT5G66690.1 27.897 466 260 18 15 436 7 440 3.76e-29 120
Msa1399580 AT5G17050.1 29.568 301 176 9 174 457 175 456 5.93e-29 119
Msa1399580 AT2G29710.1 25.000 468 310 16 18 455 8 464 2.97e-28 117
Msa1399580 AT5G14860.1 26.115 471 268 18 15 435 8 448 3.58e-28 117
Msa1399580 AT2G31750.1 30.962 239 145 8 213 439 202 432 9.06e-28 115
Msa1399580 AT2G31750.2 28.519 270 163 10 213 461 202 462 1.17e-27 115
Msa1399580 AT3G46670.1 26.588 425 277 14 23 433 17 420 1.59e-27 114
Msa1399580 AT4G15480.1 25.508 443 299 13 13 433 17 450 2.06e-27 115
Msa1399580 AT5G05880.1 24.945 453 284 18 5 434 2 421 5.31e-27 113
Msa1399580 AT1G30530.1 32.889 225 140 7 212 436 212 425 5.68e-27 113
Msa1399580 AT2G18560.1 33.469 245 135 7 212 436 115 351 1.05e-26 111
Msa1399580 AT3G46680.1 25.682 440 279 14 15 433 9 421 1.33e-26 112
Msa1399580 AT2G30140.1 22.883 437 299 14 15 436 13 426 2.24e-26 111
Msa1399580 AT3G46700.1 24.724 453 262 18 15 433 9 416 2.39e-26 111
Msa1399580 AT2G30140.2 23.288 438 295 15 15 436 13 425 4.89e-26 110
Msa1399580 AT3G21790.1 32.283 254 145 7 204 436 206 453 1.86e-25 109
Msa1399580 AT4G15490.1 26.566 463 266 17 15 434 8 439 2.23e-25 108
Msa1399580 AT1G06000.1 26.267 434 251 14 15 427 10 395 2.57e-25 108
Msa1399580 AT3G46690.1 25.676 444 280 16 15 436 9 424 4.25e-25 107
Msa1399580 AT2G43840.2 25.400 437 283 18 15 433 7 418 6.57e-25 107
Msa1399580 AT2G43840.1 25.400 437 283 18 15 433 7 418 8.17e-25 107
Msa1399580 AT2G36970.1 28.782 271 160 9 179 434 191 443 1.51e-24 106
Msa1399580 AT2G26480.1 25.000 448 269 16 15 433 8 417 2.19e-24 105
Msa1399580 AT4G14090.1 24.615 455 283 18 8 434 6 428 2.31e-24 105
Msa1399580 AT1G07240.1 34.579 214 115 7 263 455 268 477 3.38e-24 105
Msa1399580 AT2G30150.2 25.380 461 301 16 15 453 13 452 3.63e-24 105
Msa1399580 AT3G46660.1 25.740 439 279 14 16 433 15 427 3.79e-24 105
Msa1399580 AT1G07260.1 31.452 248 149 10 204 438 209 448 3.85e-24 105
Msa1399580 AT4G15500.1 26.728 434 297 13 15 434 9 435 3.93e-24 105
Msa1399580 AT1G78270.1 23.179 453 296 13 15 431 13 449 4.17e-24 105
Msa1399580 AT2G28080.1 23.877 423 286 12 19 418 22 431 6.53e-24 104
Msa1399580 AT5G38040.1 31.441 229 140 6 211 433 204 421 9.45e-24 103
Msa1399580 AT1G22380.1 23.620 453 298 15 15 433 13 451 1.31e-23 103
Msa1399580 AT5G17030.1 33.136 169 107 3 268 436 268 430 1.78e-23 103
Msa1399580 AT3G16520.1 30.952 210 129 5 239 437 237 441 2.82e-23 102
Msa1399580 AT5G17040.2 31.111 225 146 5 212 436 97 312 2.82e-23 100
Msa1399580 AT3G16520.2 30.952 210 129 5 239 437 237 441 2.89e-23 102
Msa1399580 AT3G16520.3 30.952 210 129 5 239 437 237 441 2.90e-23 102
Msa1399580 AT5G17040.1 32.093 215 137 5 222 436 209 414 4.64e-23 101
Msa1399580 AT4G15280.1 31.967 244 130 9 239 454 239 474 5.55e-23 101
Msa1399580 AT4G15280.2 31.967 244 130 9 239 454 271 506 6.08e-23 102
Msa1399580 AT1G01390.1 31.628 215 128 2 236 436 233 442 9.54e-23 101
Msa1399580 AT2G29740.1 31.933 238 146 8 204 431 214 445 9.62e-23 101
Msa1399580 AT2G30150.1 25.164 457 299 16 19 453 1 436 1.03e-22 100
Msa1399580 AT1G01390.2 31.628 215 128 2 236 436 250 459 1.33e-22 100
Msa1399580 AT2G43820.1 24.018 433 296 15 15 434 7 419 1.67e-22 100
Msa1399580 AT5G38010.1 31.489 235 132 8 211 433 208 425 2.01e-22 100
Msa1399580 AT1G22400.1 35.119 168 100 5 269 433 291 452 2.49e-22 100
Msa1399580 AT5G05870.1 25.055 455 271 18 15 434 8 427 3.72e-22 99.4
Msa1399580 AT1G24100.1 23.028 469 318 13 15 459 11 460 4.09e-22 99.0
Msa1399580 AT2G23260.1 24.670 454 298 15 1 436 1 428 5.71e-22 98.6
Msa1399580 AT5G05900.1 23.767 446 283 15 14 434 7 420 6.65e-22 98.2
Msa1399580 AT2G29750.1 32.110 218 128 8 253 454 261 474 1.25e-21 97.8
Msa1399580 AT2G23250.1 24.242 429 282 11 25 436 8 410 1.47e-21 97.4
Msa1399580 AT4G15260.1 28.674 279 160 9 206 454 86 355 1.87e-21 95.9
Msa1399580 AT3G46720.1 24.885 434 291 13 10 433 4 412 2.17e-21 96.7
Msa1399580 AT1G05530.1 23.831 449 287 14 15 434 5 427 2.32e-21 96.7
Msa1399580 AT4G34135.2 23.193 332 218 8 12 316 8 329 2.36e-21 95.1
Msa1399580 AT1G05560.1 34.463 177 102 5 269 434 251 424 2.53e-21 96.7
Msa1399580 AT1G05560.2 34.463 177 102 5 269 434 301 474 3.78e-21 96.7
Msa1399580 AT5G05860.1 24.565 460 275 19 5 434 3 420 8.17e-21 95.1
Msa1399580 AT3G55700.1 24.894 470 301 18 12 455 5 448 1.21e-20 94.7
Msa1399580 AT5G05890.1 23.382 479 307 18 5 454 2 449 1.24e-20 94.7
Msa1399580 AT1G22360.1 32.558 172 103 5 269 435 287 450 1.25e-20 94.7
Msa1399580 AT3G21560.1 22.944 462 288 14 13 433 10 444 2.16e-20 94.4
Msa1399580 AT4G15550.1 24.242 462 278 19 15 433 13 445 5.57e-20 92.8
Msa1399580 AT3G21760.1 29.365 252 152 7 206 436 209 455 5.61e-20 92.8
Msa1399580 AT1G22340.1 22.271 458 303 16 15 435 13 454 7.37e-20 92.4
Msa1399580 AT1G22370.2 23.855 415 276 13 15 399 13 417 1.54e-19 91.7
Msa1399580 AT3G11340.1 27.234 235 157 6 207 436 194 419 2.83e-19 90.5
Msa1399580 AT3G21800.1 27.843 255 156 7 204 436 202 450 3.99e-19 90.1
Msa1399580 AT3G55710.1 23.326 433 283 13 16 423 9 417 1.37e-18 88.6
Msa1399580 AT3G02100.1 24.336 452 294 17 6 433 4 431 5.49e-18 86.7
Msa1399580 AT1G22360.2 33.125 160 96 5 269 420 287 443 5.57e-18 86.7
Msa1399580 AT2G22930.2 27.660 235 146 8 14 239 5 224 1.21e-17 83.6
Msa1399580 AT3G21780.1 29.665 209 130 4 206 401 199 403 2.57e-17 84.7
Msa1399580 AT3G21750.1 26.271 236 147 7 206 424 196 421 1.96e-16 82.0
Msa1399580 AT1G22370.1 35.294 136 80 5 269 399 115 247 3.69e-16 79.7
Msa1399580 AT5G37950.2 30.978 184 104 6 211 383 174 345 1.90e-14 75.1
Msa1399580 AT5G37950.1 30.978 184 104 6 211 383 180 351 1.97e-14 75.1

Find 98 sgRNAs with CRISPR-Local

Find 238 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
GCTCATGGAATTGAACTTTC+TGG 0.165732 tig0022379:+26771 Msa1399580:CDS
TTTCTGGGTTGCCTTTCTTT+TGG 0.187165 tig0022379:+26787 Msa1399580:CDS
AATTCAACCATTCATCAATT+TGG 0.203981 tig0022379:+26065 Msa1399580:CDS
TGGTGGGCTACACATGTTTA+TGG 0.209150 tig0022379:-26361 None:intergenic
ACAAGGAATGTTAAGGCTTT+TGG 0.260980 tig0022379:-26277 None:intergenic
GATGAATGGTTGAATTGTTT+TGG 0.264261 tig0022379:-26058 None:intergenic
GTTCTTTCCTCAAATCCTTT+AGG 0.272403 tig0022379:-26846 None:intergenic
TCTGTTGTTTACATTGGATT+TGG 0.286646 tig0022379:+26708 Msa1399580:CDS
GCCAAAATTCTTGCTCAAAA+TGG 0.291433 tig0022379:+25979 Msa1399580:CDS
TATTACCAACCTCAATGTTT+TGG 0.299364 tig0022379:-27120 None:intergenic
CAAAACAACGTGGAATTGTT+TGG 0.335331 tig0022379:+26868 Msa1399580:CDS
AAACACTGGTCAAGTATATA+AGG 0.342334 tig0022379:-27011 None:intergenic
TTGTGCTCATTACAGTATAC+TGG 0.353603 tig0022379:+26296 Msa1399580:CDS
GTCGTTGAGATGCTTCATCT+TGG 0.354689 tig0022379:+26969 Msa1399580:CDS
CTCATGGAATTGAACTTTCT+GGG 0.357870 tig0022379:+26772 Msa1399580:CDS
TTTATTCTCATCAGCTCATA+AGG 0.360062 tig0022379:-26420 None:intergenic
AACATTGAGGTTGGTAATAG+TGG 0.386998 tig0022379:+27124 Msa1399580:CDS
TTATGAGCTGATGAGAATAA+AGG 0.392152 tig0022379:+26422 Msa1399580:CDS
CAAAACTTCAAAGCCTGATT+GGG 0.395265 tig0022379:+26215 Msa1399580:CDS
CTCATACATCCACCAATTGA+TGG 0.395424 tig0022379:-26927 None:intergenic
TCAAAACTTCAAAGCCTGAT+TGG 0.396669 tig0022379:+26214 Msa1399580:CDS
TATGATTGGTTATCTTAAGT+TGG 0.409369 tig0022379:+26155 Msa1399580:CDS
AGGAAGAAAACAACCCTGAT+TGG 0.415145 tig0022379:+26646 Msa1399580:CDS
AGCAAGATGGGTCCTTTACT+AGG 0.418186 tig0022379:+27087 Msa1399580:CDS
TGAATTACCTAAAGGATTTG+AGG 0.421590 tig0022379:+26839 Msa1399580:CDS
TCTATGATTGTGCAGCTGAT+TGG 0.423864 tig0022379:+26241 Msa1399580:CDS
ATGTTTATGGCTTGATCCCT+CGG 0.426177 tig0022379:-26348 None:intergenic
CCTTGTAGTTGTTCTATATG+TGG 0.427271 tig0022379:-26102 None:intergenic
TATCTTAAGTTGGCTTATAA+CGG 0.434561 tig0022379:+26165 Msa1399580:CDS
AGCACTTGTGAATACTTTGC+TGG 0.437029 tig0022379:-26493 None:intergenic
ATCTTAGCTCATCCATCAAT+TGG 0.443195 tig0022379:+26915 Msa1399580:CDS
TCGTTGAGATGCTTCATCTT+GGG 0.443683 tig0022379:+26970 Msa1399580:CDS
TCATCTTCTGTTGTTTACAT+TGG 0.447946 tig0022379:+26702 Msa1399580:CDS
TTGTGCAGCTGATTGGTTGC+CGG 0.462600 tig0022379:+26248 Msa1399580:CDS
GAATCTGTTAAGAATGAGTC+TGG 0.464273 tig0022379:+26444 Msa1399580:CDS
GTGGAATTGTTTGGAAAACC+TGG 0.464342 tig0022379:+26877 Msa1399580:CDS
CATGAAATATGCTTAATTGT+CGG 0.468131 tig0022379:-27270 None:intergenic
AAGGTTCCTGTGCTTCCTGT+TGG 0.469811 tig0022379:+26585 Msa1399580:CDS
GATGGTGGAAGCACTCCAAC+AGG 0.472911 tig0022379:-26600 None:intergenic
GTTTCGAAAGGAAGCCACTT+TGG 0.476272 tig0022379:-26381 None:intergenic
CCCTGATTGGGTCAAAATCA+AGG 0.477934 tig0022379:+26659 Msa1399580:CDS
CAATCATAGAAAACCCAATC+AGG 0.484151 tig0022379:-26228 None:intergenic
GGAAGAAAACAACCCTGATT+GGG 0.488759 tig0022379:+26647 Msa1399580:CDS
GACCCATCTTGCTCACTCCT+TGG 0.494449 tig0022379:-27077 None:intergenic
AATGAGCACAAGGAATGTTA+AGG 0.496009 tig0022379:-26284 None:intergenic
AATGCTCCCATGGCTAGCTA+TGG 0.498948 tig0022379:+25930 Msa1399580:CDS
TTCATGTTGCAATGCTCCCA+TGG 0.500286 tig0022379:+25920 Msa1399580:CDS
GGTTCAACTGAGAATGAGAA+TGG 0.500464 tig0022379:+25883 Msa1399580:CDS
GCAGATAAGAGACGACCAAC+AGG 0.503099 tig0022379:+26626 Msa1399580:CDS
TACCAAGGAGTGAGCAAGAT+GGG 0.511789 tig0022379:+27075 Msa1399580:CDS
TTATCTTTCTCACCGATACA+AGG 0.512030 tig0022379:+26566 Msa1399580:CDS
GATTTAACTGAGTTAGCTCA+TGG 0.517554 tig0022379:+26756 Msa1399580:CDS
GGCTACAGAGTCCCTAGTAA+AGG 0.518059 tig0022379:-27099 None:intergenic
CGAAAGGAAGCCACTTTGGT+GGG 0.520052 tig0022379:-26377 None:intergenic
TCTTTCAAAGCCCAAAAGAA+AGG 0.522020 tig0022379:-26798 None:intergenic
GATTTAACCAAATTGATGAA+TGG 0.529740 tig0022379:-26072 None:intergenic
TTGGTAATAGTGGACGAGGA+AGG 0.535901 tig0022379:+27134 Msa1399580:CDS
AGAACCTCTAGAGAACTTGA+AGG 0.540384 tig0022379:+26531 Msa1399580:CDS
CTAGAGAACTTGAAGGTCCA+TGG 0.549835 tig0022379:+26538 Msa1399580:CDS
TCGAAAGGAAGCCACTTTGG+TGG 0.554758 tig0022379:-26378 None:intergenic
GGTGTATCTGAATTACCTAA+AGG 0.557474 tig0022379:+26831 Msa1399580:CDS
ATGCTCCCATGGCTAGCTAT+GGG 0.561382 tig0022379:+25931 Msa1399580:CDS
GGTCAAAATCAAGGCATGGT+TGG 0.563051 tig0022379:+26668 Msa1399580:CDS
GGGAGCATTGCAACATGAAG+AGG 0.566487 tig0022379:-25916 None:intergenic
TCATTCTCAGTTGAACCCAT+AGG 0.572239 tig0022379:-25877 None:intergenic
AGTTGTTCTATATGTGGTAA+AGG 0.573184 tig0022379:-26096 None:intergenic
AGCACTCCAACAGGAAGCAC+AGG 0.576668 tig0022379:-26591 None:intergenic
TTAGCTCATCCATCAATTGG+TGG 0.582249 tig0022379:+26918 Msa1399580:CDS
ACGTGTCCCATAGCTAGCCA+TGG 0.586684 tig0022379:-25937 None:intergenic
TGTAGCCAAAACATTGAGGT+TGG 0.588220 tig0022379:+27115 Msa1399580:CDS
TTGGATTTGGAAGTGAGTCA+AGG 0.593234 tig0022379:+26721 Msa1399580:CDS
TCGTCTCTTATCTGCAAGGA+TGG 0.596635 tig0022379:-26618 None:intergenic
AGATAAACGATTGTTTCGAA+AGG 0.602092 tig0022379:-26393 None:intergenic
TCTCTTATCTGCAAGGATGG+TGG 0.605203 tig0022379:-26615 None:intergenic
GCAAGATGGGTCCTTTACTA+GGG 0.609670 tig0022379:+27088 Msa1399580:CDS
TGGACCTTCAAGTTCTCTAG+AGG 0.613482 tig0022379:-26535 None:intergenic
TTGGTCGTCTCTTATCTGCA+AGG 0.616498 tig0022379:-26622 None:intergenic
TGGAATTGTTTGGAAAACCT+GGG 0.617851 tig0022379:+26878 Msa1399580:CDS
ACGAGGAAGGAAGTACGTAC+AGG 0.618952 tig0022379:+27147 Msa1399580:CDS
GTAATCTTGCATACAAACAC+TGG 0.622454 tig0022379:-27025 None:intergenic
CGTGTCCCATAGCTAGCCAT+GGG 0.626099 tig0022379:-25936 None:intergenic
ATGTTTCTTTAATCCACCGA+GGG 0.626672 tig0022379:+26332 Msa1399580:CDS
TCTGTTAAGAATGAGTCTGG+TGG 0.629360 tig0022379:+26447 Msa1399580:CDS
GAGGTTGGTAATAGTGGACG+AGG 0.629458 tig0022379:+27130 Msa1399580:CDS
CCACATATAGAACAACTACA+AGG 0.633026 tig0022379:+26102 Msa1399580:CDS
ACTCTGTAGCCAAAACATTG+AGG 0.637396 tig0022379:+27111 Msa1399580:CDS
GTACCAAGGAGTGAGCAAGA+TGG 0.637812 tig0022379:+27074 Msa1399580:CDS
ATTGGGTCAAAATCAAGGCA+TGG 0.641022 tig0022379:+26664 Msa1399580:CDS
ACATGTGTAGCCCACCAAAG+TGG 0.647854 tig0022379:+26367 Msa1399580:CDS
TGAGAAAGATAATCTAACCA+TGG 0.649258 tig0022379:-26555 None:intergenic
AGTATACTGTAATGAGCACA+AGG 0.649297 tig0022379:-26294 None:intergenic
GAAGCACAGGAACCTTGTAT+CGG 0.649491 tig0022379:-26578 None:intergenic
GCTTTGAAAGATCGTAAAGA+CGG 0.650329 tig0022379:+26810 Msa1399580:CDS
AAGTGGCTGTTGAAGTACCA+AGG 0.655585 tig0022379:+27060 Msa1399580:CDS
TTTATGGCTTGATCCCTCGG+TGG 0.664626 tig0022379:-26345 None:intergenic
TATGTTTCTTTAATCCACCG+AGG 0.703621 tig0022379:+26331 Msa1399580:CDS
GGTGGATGTATGAGTCACTG+TGG 0.785302 tig0022379:+26936 Msa1399580:CDS
GAGGAAAGAACAAAACAACG+TGG 0.805520 tig0022379:+26858 Msa1399580:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! AATATTCCAAAAAATATGAT+TGG + tig0022379:26141-26160 Msa1399580:CDS 15.0%
!! AATATTCCAAAAAATATGAT+TGG + tig0022379:26141-26160 Msa1399580:CDS 15.0%
!!! AGATAACCAATCATATTTTT+TGG - tig0022379:26150-26169 None:intergenic 20.0%
!! ATTACTAGAAGAAAAAAAAG+TGG + tig0022379:27043-27062 Msa1399580:CDS 20.0%
!!! AGATAACCAATCATATTTTT+TGG - tig0022379:26150-26169 None:intergenic 20.0%
!! ATTACTAGAAGAAAAAAAAG+TGG + tig0022379:27043-27062 Msa1399580:CDS 20.0%
!! GGAATTTGATCAATGTTTTT+GGG - tig0022379:26030-26049 None:intergenic 25.0%
!! AGGAATTTGATCAATGTTTT+TGG - tig0022379:26031-26050 None:intergenic 25.0%
!! ATGAATGGTTGAATTGTTTT+GGG - tig0022379:26060-26079 None:intergenic 25.0%
! AATTCAACCATTCATCAATT+TGG + tig0022379:26065-26084 Msa1399580:CDS 25.0%
! GATTTAACCAAATTGATGAA+TGG - tig0022379:26075-26094 None:intergenic 25.0%
!! TATGATTGGTTATCTTAAGT+TGG + tig0022379:26155-26174 Msa1399580:CDS 25.0%
!!! TATCTTAAGTTGGCTTATAA+CGG + tig0022379:26165-26184 Msa1399580:CDS 25.0%
! AGGAAAAATGCTAAAGATAT+GGG + tig0022379:27167-27186 Msa1399580:CDS 25.0%
!! GGAATTTGATCAATGTTTTT+GGG - tig0022379:26030-26049 None:intergenic 25.0%
!! AGGAATTTGATCAATGTTTT+TGG - tig0022379:26031-26050 None:intergenic 25.0%
!! ATGAATGGTTGAATTGTTTT+GGG - tig0022379:26060-26079 None:intergenic 25.0%
! AATTCAACCATTCATCAATT+TGG + tig0022379:26065-26084 Msa1399580:CDS 25.0%
! GATTTAACCAAATTGATGAA+TGG - tig0022379:26075-26094 None:intergenic 25.0%
!! TATGATTGGTTATCTTAAGT+TGG + tig0022379:26155-26174 Msa1399580:CDS 25.0%
!!! TATCTTAAGTTGGCTTATAA+CGG + tig0022379:26165-26184 Msa1399580:CDS 25.0%
! AGGAAAAATGCTAAAGATAT+GGG + tig0022379:27167-27186 Msa1399580:CDS 25.0%
! TTTTGGCCAACTCAAAATAA+GGG - tig0022379:25966-25985 None:intergenic 30.0%
!! ATTTTGGCCAACTCAAAATA+AGG - tig0022379:25967-25986 None:intergenic 30.0%
! ACCATTTTGAGCAAGAATTT+TGG - tig0022379:25983-26002 None:intergenic 30.0%
! GATGAATGGTTGAATTGTTT+TGG - tig0022379:26061-26080 None:intergenic 30.0%
AGTTGTTCTATATGTGGTAA+AGG - tig0022379:26099-26118 None:intergenic 30.0%
AGATAAACGATTGTTTCGAA+AGG - tig0022379:26396-26415 None:intergenic 30.0%
TTTATTCTCATCAGCTCATA+AGG - tig0022379:26423-26442 None:intergenic 30.0%
TTATGAGCTGATGAGAATAA+AGG + tig0022379:26422-26441 Msa1399580:CDS 30.0%
TGAGAAAGATAATCTAACCA+TGG - tig0022379:26558-26577 None:intergenic 30.0%
! TCATCTTCTGTTGTTTACAT+TGG + tig0022379:26702-26721 Msa1399580:CDS 30.0%
! TCTGTTGTTTACATTGGATT+TGG + tig0022379:26708-26727 Msa1399580:CDS 30.0%
TGAATTACCTAAAGGATTTG+AGG + tig0022379:26839-26858 Msa1399580:CDS 30.0%
!! ATGAGCTAAGATTTTGATCT+GGG - tig0022379:26907-26926 None:intergenic 30.0%
AAACACTGGTCAAGTATATA+AGG - tig0022379:27014-27033 None:intergenic 30.0%
! TATTACCAACCTCAATGTTT+TGG - tig0022379:27123-27142 None:intergenic 30.0%
CAGGAAAAATGCTAAAGATA+TGG + tig0022379:27166-27185 Msa1399580:CDS 30.0%
! TTTTGGCCAACTCAAAATAA+GGG - tig0022379:25966-25985 None:intergenic 30.0%
!! ATTTTGGCCAACTCAAAATA+AGG - tig0022379:25967-25986 None:intergenic 30.0%
! ACCATTTTGAGCAAGAATTT+TGG - tig0022379:25983-26002 None:intergenic 30.0%
! GATGAATGGTTGAATTGTTT+TGG - tig0022379:26061-26080 None:intergenic 30.0%
AGTTGTTCTATATGTGGTAA+AGG - tig0022379:26099-26118 None:intergenic 30.0%
AGATAAACGATTGTTTCGAA+AGG - tig0022379:26396-26415 None:intergenic 30.0%
TTTATTCTCATCAGCTCATA+AGG - tig0022379:26423-26442 None:intergenic 30.0%
TTATGAGCTGATGAGAATAA+AGG + tig0022379:26422-26441 Msa1399580:CDS 30.0%
TGAGAAAGATAATCTAACCA+TGG - tig0022379:26558-26577 None:intergenic 30.0%
! TCATCTTCTGTTGTTTACAT+TGG + tig0022379:26702-26721 Msa1399580:CDS 30.0%
! TCTGTTGTTTACATTGGATT+TGG + tig0022379:26708-26727 Msa1399580:CDS 30.0%
TGAATTACCTAAAGGATTTG+AGG + tig0022379:26839-26858 Msa1399580:CDS 30.0%
!! ATGAGCTAAGATTTTGATCT+GGG - tig0022379:26907-26926 None:intergenic 30.0%
AAACACTGGTCAAGTATATA+AGG - tig0022379:27014-27033 None:intergenic 30.0%
! TATTACCAACCTCAATGTTT+TGG - tig0022379:27123-27142 None:intergenic 30.0%
CAGGAAAAATGCTAAAGATA+TGG + tig0022379:27166-27185 Msa1399580:CDS 30.0%
GCCAAAATTCTTGCTCAAAA+TGG + tig0022379:25979-25998 Msa1399580:CDS 35.0%
!! GTTTTTGGGAGAGTTAATCA+AGG - tig0022379:26016-26035 None:intergenic 35.0%
CCTTGTAGTTGTTCTATATG+TGG - tig0022379:26105-26124 None:intergenic 35.0%
CCACATATAGAACAACTACA+AGG + tig0022379:26102-26121 Msa1399580:CDS 35.0%
TCAAAACTTCAAAGCCTGAT+TGG + tig0022379:26214-26233 Msa1399580:CDS 35.0%
CAAAACTTCAAAGCCTGATT+GGG + tig0022379:26215-26234 Msa1399580:CDS 35.0%
CAATCATAGAAAACCCAATC+AGG - tig0022379:26231-26250 None:intergenic 35.0%
! ACAAGGAATGTTAAGGCTTT+TGG - tig0022379:26280-26299 None:intergenic 35.0%
AATGAGCACAAGGAATGTTA+AGG - tig0022379:26287-26306 None:intergenic 35.0%
AGTATACTGTAATGAGCACA+AGG - tig0022379:26297-26316 None:intergenic 35.0%
TTGTGCTCATTACAGTATAC+TGG + tig0022379:26296-26315 Msa1399580:CDS 35.0%
TATGTTTCTTTAATCCACCG+AGG + tig0022379:26331-26350 Msa1399580:CDS 35.0%
ATGTTTCTTTAATCCACCGA+GGG + tig0022379:26332-26351 Msa1399580:CDS 35.0%
GAATCTGTTAAGAATGAGTC+TGG + tig0022379:26444-26463 Msa1399580:CDS 35.0%
TTATCTTTCTCACCGATACA+AGG + tig0022379:26566-26585 Msa1399580:CDS 35.0%
GATTTAACTGAGTTAGCTCA+TGG + tig0022379:26756-26775 Msa1399580:CDS 35.0%
CTCATGGAATTGAACTTTCT+GGG + tig0022379:26772-26791 Msa1399580:CDS 35.0%
TCTTTCAAAGCCCAAAAGAA+AGG - tig0022379:26801-26820 None:intergenic 35.0%
!! GCTTTGAAAGATCGTAAAGA+CGG + tig0022379:26810-26829 Msa1399580:CDS 35.0%
GGTGTATCTGAATTACCTAA+AGG + tig0022379:26831-26850 Msa1399580:CDS 35.0%
GTTCTTTCCTCAAATCCTTT+AGG - tig0022379:26849-26868 None:intergenic 35.0%
CAAAACAACGTGGAATTGTT+TGG + tig0022379:26868-26887 Msa1399580:CDS 35.0%
TGGAATTGTTTGGAAAACCT+GGG + tig0022379:26878-26897 Msa1399580:CDS 35.0%
!! TGAGCTAAGATTTTGATCTG+GGG - tig0022379:26906-26925 None:intergenic 35.0%
!! GATGAGCTAAGATTTTGATC+TGG - tig0022379:26908-26927 None:intergenic 35.0%
ATCTTAGCTCATCCATCAAT+TGG + tig0022379:26915-26934 Msa1399580:CDS 35.0%
GTAATCTTGCATACAAACAC+TGG - tig0022379:27028-27047 None:intergenic 35.0%
!! AACATTGAGGTTGGTAATAG+TGG + tig0022379:27124-27143 Msa1399580:CDS 35.0%
GCCAAAATTCTTGCTCAAAA+TGG + tig0022379:25979-25998 Msa1399580:CDS 35.0%
!! GTTTTTGGGAGAGTTAATCA+AGG - tig0022379:26016-26035 None:intergenic 35.0%
CCTTGTAGTTGTTCTATATG+TGG - tig0022379:26105-26124 None:intergenic 35.0%
CCACATATAGAACAACTACA+AGG + tig0022379:26102-26121 Msa1399580:CDS 35.0%
TCAAAACTTCAAAGCCTGAT+TGG + tig0022379:26214-26233 Msa1399580:CDS 35.0%
CAAAACTTCAAAGCCTGATT+GGG + tig0022379:26215-26234 Msa1399580:CDS 35.0%
CAATCATAGAAAACCCAATC+AGG - tig0022379:26231-26250 None:intergenic 35.0%
! ACAAGGAATGTTAAGGCTTT+TGG - tig0022379:26280-26299 None:intergenic 35.0%
AATGAGCACAAGGAATGTTA+AGG - tig0022379:26287-26306 None:intergenic 35.0%
AGTATACTGTAATGAGCACA+AGG - tig0022379:26297-26316 None:intergenic 35.0%
TTGTGCTCATTACAGTATAC+TGG + tig0022379:26296-26315 Msa1399580:CDS 35.0%
TATGTTTCTTTAATCCACCG+AGG + tig0022379:26331-26350 Msa1399580:CDS 35.0%
ATGTTTCTTTAATCCACCGA+GGG + tig0022379:26332-26351 Msa1399580:CDS 35.0%
GAATCTGTTAAGAATGAGTC+TGG + tig0022379:26444-26463 Msa1399580:CDS 35.0%
TTATCTTTCTCACCGATACA+AGG + tig0022379:26566-26585 Msa1399580:CDS 35.0%
GATTTAACTGAGTTAGCTCA+TGG + tig0022379:26756-26775 Msa1399580:CDS 35.0%
CTCATGGAATTGAACTTTCT+GGG + tig0022379:26772-26791 Msa1399580:CDS 35.0%
TCTTTCAAAGCCCAAAAGAA+AGG - tig0022379:26801-26820 None:intergenic 35.0%
!! GCTTTGAAAGATCGTAAAGA+CGG + tig0022379:26810-26829 Msa1399580:CDS 35.0%
GGTGTATCTGAATTACCTAA+AGG + tig0022379:26831-26850 Msa1399580:CDS 35.0%
GTTCTTTCCTCAAATCCTTT+AGG - tig0022379:26849-26868 None:intergenic 35.0%
CAAAACAACGTGGAATTGTT+TGG + tig0022379:26868-26887 Msa1399580:CDS 35.0%
TGGAATTGTTTGGAAAACCT+GGG + tig0022379:26878-26897 Msa1399580:CDS 35.0%
!! TGAGCTAAGATTTTGATCTG+GGG - tig0022379:26906-26925 None:intergenic 35.0%
!! GATGAGCTAAGATTTTGATC+TGG - tig0022379:26908-26927 None:intergenic 35.0%
ATCTTAGCTCATCCATCAAT+TGG + tig0022379:26915-26934 Msa1399580:CDS 35.0%
GTAATCTTGCATACAAACAC+TGG - tig0022379:27028-27047 None:intergenic 35.0%
!! AACATTGAGGTTGGTAATAG+TGG + tig0022379:27124-27143 Msa1399580:CDS 35.0%
GGTTCAACTGAGAATGAGAA+TGG + tig0022379:25883-25902 Msa1399580:CDS 40.0%
!!! CGTACTCCCTTATTTTGAGT+TGG + tig0022379:25957-25976 Msa1399580:CDS 40.0%
!!! TGAATTGTTTTGGGCGCTTT+AGG - tig0022379:26051-26070 None:intergenic 40.0%
TCTATGATTGTGCAGCTGAT+TGG + tig0022379:26241-26260 Msa1399580:CDS 40.0%
! TTAAGGCTTTTGGCAATTGC+CGG - tig0022379:26270-26289 None:intergenic 40.0%
ATGTTTATGGCTTGATCCCT+CGG - tig0022379:26351-26370 None:intergenic 40.0%
TCTGTTAAGAATGAGTCTGG+TGG + tig0022379:26447-26466 Msa1399580:CDS 40.0%
AGCACTTGTGAATACTTTGC+TGG - tig0022379:26496-26515 None:intergenic 40.0%
! AGAACCTCTAGAGAACTTGA+AGG + tig0022379:26531-26550 Msa1399580:CDS 40.0%
AGGAAGAAAACAACCCTGAT+TGG + tig0022379:26646-26665 Msa1399580:CDS 40.0%
GGAAGAAAACAACCCTGATT+GGG + tig0022379:26647-26666 Msa1399580:CDS 40.0%
!! CCTTGATTTTGACCCAATCA+GGG - tig0022379:26662-26681 None:intergenic 40.0%
ATTGGGTCAAAATCAAGGCA+TGG + tig0022379:26664-26683 Msa1399580:CDS 40.0%
TTGGATTTGGAAGTGAGTCA+AGG + tig0022379:26721-26740 Msa1399580:CDS 40.0%
GCTCATGGAATTGAACTTTC+TGG + tig0022379:26771-26790 Msa1399580:CDS 40.0%
! TTTCTGGGTTGCCTTTCTTT+TGG + tig0022379:26787-26806 Msa1399580:CDS 40.0%
! TTCTGGGTTGCCTTTCTTTT+GGG + tig0022379:26788-26807 Msa1399580:CDS 40.0%
GAGGAAAGAACAAAACAACG+TGG + tig0022379:26858-26877 Msa1399580:CDS 40.0%
GTGGAATTGTTTGGAAAACC+TGG + tig0022379:26877-26896 Msa1399580:CDS 40.0%
TTAGCTCATCCATCAATTGG+TGG + tig0022379:26918-26937 Msa1399580:CDS 40.0%
CTCATACATCCACCAATTGA+TGG - tig0022379:26930-26949 None:intergenic 40.0%
TCGTTGAGATGCTTCATCTT+GGG + tig0022379:26970-26989 Msa1399580:CDS 40.0%
ACTCTGTAGCCAAAACATTG+AGG + tig0022379:27111-27130 Msa1399580:CDS 40.0%
TGTAGCCAAAACATTGAGGT+TGG + tig0022379:27115-27134 Msa1399580:CDS 40.0%
GGTTCAACTGAGAATGAGAA+TGG + tig0022379:25883-25902 Msa1399580:CDS 40.0%
!!! CGTACTCCCTTATTTTGAGT+TGG + tig0022379:25957-25976 Msa1399580:CDS 40.0%
!!! TGAATTGTTTTGGGCGCTTT+AGG - tig0022379:26051-26070 None:intergenic 40.0%
TCTATGATTGTGCAGCTGAT+TGG + tig0022379:26241-26260 Msa1399580:CDS 40.0%
! TTAAGGCTTTTGGCAATTGC+CGG - tig0022379:26270-26289 None:intergenic 40.0%
ATGTTTATGGCTTGATCCCT+CGG - tig0022379:26351-26370 None:intergenic 40.0%
TCTGTTAAGAATGAGTCTGG+TGG + tig0022379:26447-26466 Msa1399580:CDS 40.0%
AGCACTTGTGAATACTTTGC+TGG - tig0022379:26496-26515 None:intergenic 40.0%
! AGAACCTCTAGAGAACTTGA+AGG + tig0022379:26531-26550 Msa1399580:CDS 40.0%
AGGAAGAAAACAACCCTGAT+TGG + tig0022379:26646-26665 Msa1399580:CDS 40.0%
GGAAGAAAACAACCCTGATT+GGG + tig0022379:26647-26666 Msa1399580:CDS 40.0%
!! CCTTGATTTTGACCCAATCA+GGG - tig0022379:26662-26681 None:intergenic 40.0%
ATTGGGTCAAAATCAAGGCA+TGG + tig0022379:26664-26683 Msa1399580:CDS 40.0%
TTGGATTTGGAAGTGAGTCA+AGG + tig0022379:26721-26740 Msa1399580:CDS 40.0%
GCTCATGGAATTGAACTTTC+TGG + tig0022379:26771-26790 Msa1399580:CDS 40.0%
! TTTCTGGGTTGCCTTTCTTT+TGG + tig0022379:26787-26806 Msa1399580:CDS 40.0%
! TTCTGGGTTGCCTTTCTTTT+GGG + tig0022379:26788-26807 Msa1399580:CDS 40.0%
GAGGAAAGAACAAAACAACG+TGG + tig0022379:26858-26877 Msa1399580:CDS 40.0%
GTGGAATTGTTTGGAAAACC+TGG + tig0022379:26877-26896 Msa1399580:CDS 40.0%
TTAGCTCATCCATCAATTGG+TGG + tig0022379:26918-26937 Msa1399580:CDS 40.0%
CTCATACATCCACCAATTGA+TGG - tig0022379:26930-26949 None:intergenic 40.0%
TCGTTGAGATGCTTCATCTT+GGG + tig0022379:26970-26989 Msa1399580:CDS 40.0%
ACTCTGTAGCCAAAACATTG+AGG + tig0022379:27111-27130 Msa1399580:CDS 40.0%
TGTAGCCAAAACATTGAGGT+TGG + tig0022379:27115-27134 Msa1399580:CDS 40.0%
TTCATGTTGCAATGCTCCCA+TGG + tig0022379:25920-25939 Msa1399580:CDS 45.0%
!! TGGTGGGCTACACATGTTTA+TGG - tig0022379:26364-26383 None:intergenic 45.0%
GTTTCGAAAGGAAGCCACTT+TGG - tig0022379:26384-26403 None:intergenic 45.0%
! TGGACCTTCAAGTTCTCTAG+AGG - tig0022379:26538-26557 None:intergenic 45.0%
CTAGAGAACTTGAAGGTCCA+TGG + tig0022379:26538-26557 Msa1399580:CDS 45.0%
GAAGCACAGGAACCTTGTAT+CGG - tig0022379:26581-26600 None:intergenic 45.0%
TCTCTTATCTGCAAGGATGG+TGG - tig0022379:26618-26637 None:intergenic 45.0%
TCGTCTCTTATCTGCAAGGA+TGG - tig0022379:26621-26640 None:intergenic 45.0%
TTGGTCGTCTCTTATCTGCA+AGG - tig0022379:26625-26644 None:intergenic 45.0%
!! CAGGGTTGTTTTCTTCCTGT+TGG - tig0022379:26644-26663 None:intergenic 45.0%
CCCTGATTGGGTCAAAATCA+AGG + tig0022379:26659-26678 Msa1399580:CDS 45.0%
!! GCCTTGATTTTGACCCAATC+AGG - tig0022379:26663-26682 None:intergenic 45.0%
GGTCAAAATCAAGGCATGGT+TGG + tig0022379:26668-26687 Msa1399580:CDS 45.0%
GTCGTTGAGATGCTTCATCT+TGG + tig0022379:26969-26988 Msa1399580:CDS 45.0%
! AAGTGGCTGTTGAAGTACCA+AGG + tig0022379:27060-27079 Msa1399580:CDS 45.0%
TACCAAGGAGTGAGCAAGAT+GGG + tig0022379:27075-27094 Msa1399580:CDS 45.0%
AGCAAGATGGGTCCTTTACT+AGG + tig0022379:27087-27106 Msa1399580:CDS 45.0%
GCAAGATGGGTCCTTTACTA+GGG + tig0022379:27088-27107 Msa1399580:CDS 45.0%
!! TTGGTAATAGTGGACGAGGA+AGG + tig0022379:27134-27153 Msa1399580:CDS 45.0%
TTCATGTTGCAATGCTCCCA+TGG + tig0022379:25920-25939 Msa1399580:CDS 45.0%
!! TGGTGGGCTACACATGTTTA+TGG - tig0022379:26364-26383 None:intergenic 45.0%
GTTTCGAAAGGAAGCCACTT+TGG - tig0022379:26384-26403 None:intergenic 45.0%
! TGGACCTTCAAGTTCTCTAG+AGG - tig0022379:26538-26557 None:intergenic 45.0%
CTAGAGAACTTGAAGGTCCA+TGG + tig0022379:26538-26557 Msa1399580:CDS 45.0%
GAAGCACAGGAACCTTGTAT+CGG - tig0022379:26581-26600 None:intergenic 45.0%
TCTCTTATCTGCAAGGATGG+TGG - tig0022379:26618-26637 None:intergenic 45.0%
TCGTCTCTTATCTGCAAGGA+TGG - tig0022379:26621-26640 None:intergenic 45.0%
TTGGTCGTCTCTTATCTGCA+AGG - tig0022379:26625-26644 None:intergenic 45.0%
!! CAGGGTTGTTTTCTTCCTGT+TGG - tig0022379:26644-26663 None:intergenic 45.0%
CCCTGATTGGGTCAAAATCA+AGG + tig0022379:26659-26678 Msa1399580:CDS 45.0%
!! GCCTTGATTTTGACCCAATC+AGG - tig0022379:26663-26682 None:intergenic 45.0%
GGTCAAAATCAAGGCATGGT+TGG + tig0022379:26668-26687 Msa1399580:CDS 45.0%
GTCGTTGAGATGCTTCATCT+TGG + tig0022379:26969-26988 Msa1399580:CDS 45.0%
! AAGTGGCTGTTGAAGTACCA+AGG + tig0022379:27060-27079 Msa1399580:CDS 45.0%
TACCAAGGAGTGAGCAAGAT+GGG + tig0022379:27075-27094 Msa1399580:CDS 45.0%
AGCAAGATGGGTCCTTTACT+AGG + tig0022379:27087-27106 Msa1399580:CDS 45.0%
GCAAGATGGGTCCTTTACTA+GGG + tig0022379:27088-27107 Msa1399580:CDS 45.0%
!! TTGGTAATAGTGGACGAGGA+AGG + tig0022379:27134-27153 Msa1399580:CDS 45.0%
!! GGGAGCATTGCAACATGAAG+AGG - tig0022379:25919-25938 None:intergenic 50.0%
! AATGCTCCCATGGCTAGCTA+TGG + tig0022379:25930-25949 Msa1399580:CDS 50.0%
! ATGCTCCCATGGCTAGCTAT+GGG + tig0022379:25931-25950 Msa1399580:CDS 50.0%
! TTGTGCAGCTGATTGGTTGC+CGG + tig0022379:26248-26267 Msa1399580:CDS 50.0%
TTTATGGCTTGATCCCTCGG+TGG - tig0022379:26348-26367 None:intergenic 50.0%
ACATGTGTAGCCCACCAAAG+TGG + tig0022379:26367-26386 Msa1399580:CDS 50.0%
! CGAAAGGAAGCCACTTTGGT+GGG - tig0022379:26380-26399 None:intergenic 50.0%
! TCGAAAGGAAGCCACTTTGG+TGG - tig0022379:26381-26400 None:intergenic 50.0%
AAGGTTCCTGTGCTTCCTGT+TGG + tig0022379:26585-26604 Msa1399580:CDS 50.0%
GCAGATAAGAGACGACCAAC+AGG + tig0022379:26626-26645 Msa1399580:CDS 50.0%
!! GATTTTGATCTGGGGTACCC+AGG - tig0022379:26898-26917 None:intergenic 50.0%
GGTGGATGTATGAGTCACTG+TGG + tig0022379:26936-26955 Msa1399580:CDS 50.0%
GTACCAAGGAGTGAGCAAGA+TGG + tig0022379:27074-27093 Msa1399580:CDS 50.0%
GGCTACAGAGTCCCTAGTAA+AGG - tig0022379:27102-27121 None:intergenic 50.0%
!! GAGGTTGGTAATAGTGGACG+AGG + tig0022379:27130-27149 Msa1399580:CDS 50.0%
! ACGAGGAAGGAAGTACGTAC+AGG + tig0022379:27147-27166 Msa1399580:CDS 50.0%
!! GGGAGCATTGCAACATGAAG+AGG - tig0022379:25919-25938 None:intergenic 50.0%
! AATGCTCCCATGGCTAGCTA+TGG + tig0022379:25930-25949 Msa1399580:CDS 50.0%
! ATGCTCCCATGGCTAGCTAT+GGG + tig0022379:25931-25950 Msa1399580:CDS 50.0%
! TTGTGCAGCTGATTGGTTGC+CGG + tig0022379:26248-26267 Msa1399580:CDS 50.0%
TTTATGGCTTGATCCCTCGG+TGG - tig0022379:26348-26367 None:intergenic 50.0%
ACATGTGTAGCCCACCAAAG+TGG + tig0022379:26367-26386 Msa1399580:CDS 50.0%
! CGAAAGGAAGCCACTTTGGT+GGG - tig0022379:26380-26399 None:intergenic 50.0%
! TCGAAAGGAAGCCACTTTGG+TGG - tig0022379:26381-26400 None:intergenic 50.0%
AAGGTTCCTGTGCTTCCTGT+TGG + tig0022379:26585-26604 Msa1399580:CDS 50.0%
GCAGATAAGAGACGACCAAC+AGG + tig0022379:26626-26645 Msa1399580:CDS 50.0%
!! GATTTTGATCTGGGGTACCC+AGG - tig0022379:26898-26917 None:intergenic 50.0%
GGTGGATGTATGAGTCACTG+TGG + tig0022379:26936-26955 Msa1399580:CDS 50.0%
GTACCAAGGAGTGAGCAAGA+TGG + tig0022379:27074-27093 Msa1399580:CDS 50.0%
GGCTACAGAGTCCCTAGTAA+AGG - tig0022379:27102-27121 None:intergenic 50.0%
!! GAGGTTGGTAATAGTGGACG+AGG + tig0022379:27130-27149 Msa1399580:CDS 50.0%
! ACGAGGAAGGAAGTACGTAC+AGG + tig0022379:27147-27166 Msa1399580:CDS 50.0%
CGTGTCCCATAGCTAGCCAT+GGG - tig0022379:25939-25958 None:intergenic 55.0%
ACGTGTCCCATAGCTAGCCA+TGG - tig0022379:25940-25959 None:intergenic 55.0%
! AGCACTCCAACAGGAAGCAC+AGG - tig0022379:26594-26613 None:intergenic 55.0%
!! GATGGTGGAAGCACTCCAAC+AGG - tig0022379:26603-26622 None:intergenic 55.0%
GACCCATCTTGCTCACTCCT+TGG - tig0022379:27080-27099 None:intergenic 55.0%
CGTGTCCCATAGCTAGCCAT+GGG - tig0022379:25939-25958 None:intergenic 55.0%
ACGTGTCCCATAGCTAGCCA+TGG - tig0022379:25940-25959 None:intergenic 55.0%
! AGCACTCCAACAGGAAGCAC+AGG - tig0022379:26594-26613 None:intergenic 55.0%
!! GATGGTGGAAGCACTCCAAC+AGG - tig0022379:26603-26622 None:intergenic 55.0%
GACCCATCTTGCTCACTCCT+TGG - tig0022379:27080-27099 None:intergenic 55.0%
Chromosome Type Strat End Strand Name
tig0022379 gene 25880 27280 25880 ID=Msa1399580;Name=Msa1399580
tig0022379 mRNA 25880 27280 25880 ID=Msa1399580-mRNA-1;Parent=Msa1399580;Name=Msa1399580-mRNA-1;_AED=0.00;_eAED=0.00;_QI=0|-1|0|1|-1|1|1|0|466
tig0022379 exon 25880 27280 25880 ID=Msa1399580-mRNA-1:exon:17248;Parent=Msa1399580-mRNA-1
tig0022379 CDS 25880 27280 25880 ID=Msa1399580-mRNA-1:cds;Parent=Msa1399580-mRNA-1
Gene Sequence

>Msa1399580

ATGGGTTCAACTGAGAATGAGAATGGAAATTTCAAGCCTCTTCATGTTGCAATGCTCCCATGGCTAGCTATGGGACACGTACTCCCTTATTTTGAGTTGGCCAAAATTCTTGCTCAAAATGGTCACACTGTCACCTTGATTAACTCTCCCAAAAACATTGATCAAATTCCTAAAGCGCCCAAAACAATTCAACCATTCATCAATTTGGTTAAATCACCTTTACCACATATAGAACAACTACAAGGTGAAGAGAGCATGCAGAATATTCCAAAAAATATGATTGGTTATCTTAAGTTGGCTTATAACGGTCTACAAGACGATGTTACTGAGATACTCAAAACTTCAAAGCCTGATTGGGTTTTCTATGATTGTGCAGCTGATTGGTTGCCGGCAATTGCCAAAAGCCTTAACATTCCTTGTGCTCATTACAGTATACTGGCAGCTTTGAACGTATGTTTCTTTAATCCACCGAGGGATCAAGCCATAAACATGTGTAGCCCACCAAAGTGGCTTCCTTTCGAAACAATCGTTTATCTCAAACCTTATGAGCTGATGAGAATAAAGGAATCTGTTAAGAATGAGTCTGGTGGAAAAACAGTCACTACTTCTGATACCAGCAAAGTATTCACAAGTGCTGACATGTTTATTATCAGAACCTCTAGAGAACTTGAAGGTCCATGGTTAGATTATCTTTCTCACCGATACAAGGTTCCTGTGCTTCCTGTTGGAGTGCTTCCACCATCCTTGCAGATAAGAGACGACCAACAGGAAGAAAACAACCCTGATTGGGTCAAAATCAAGGCATGGTTGGACTCTAAAGAATCATCTTCTGTTGTTTACATTGGATTTGGAAGTGAGTCAAGGTTAGATCAACAAGATTTAACTGAGTTAGCTCATGGAATTGAACTTTCTGGGTTGCCTTTCTTTTGGGCTTTGAAAGATCGTAAAGACGGTGTATCTGAATTACCTAAAGGATTTGAGGAAAGAACAAAACAACGTGGAATTGTTTGGAAAACCTGGGTACCCCAGATCAAAATCTTAGCTCATCCATCAATTGGTGGATGTATGAGTCACTGTGGTGCAAGTTCTGTCGTTGAGATGCTTCATCTTGGGCATGTTCTTGTCACATTGCCTTATATACTTGACCAGTGTTTGTATGCAAGATTACTAGAAGAAAAAAAAGTGGCTGTTGAAGTACCAAGGAGTGAGCAAGATGGGTCCTTTACTAGGGACTCTGTAGCCAAAACATTGAGGTTGGTAATAGTGGACGAGGAAGGAAGTACGTACAGGAAAAATGCTAAAGATATGGGAAATTTTTTCAGTTCAAAAGCTCTTCACAATCAATACATTAAAGATTTAATTGCTGCTCTTCAAAAGCATAGAGTTCATTCCGACAATTAA
Protein sequence

>Msa1399580

MGSTENENGNFKPLHVAMLPWLAMGHVLPYFELAKILAQNGHTVTLINSPKNIDQIPKAPKTIQPFINLVKSPLPHIEQLQGEESMQNIPKNMIGYLKLAYNGLQDDVTEILKTSKPDWVFYDCAADWLPAIAKSLNIPCAHYSILAALNVCFFNPPRDQAINMCSPPKWLPFETIVYLKPYELMRIKESVKNESGGKTVTTSDTSKVFTSADMFIIRTSRELEGPWLDYLSHRYKVPVLPVGVLPPSLQIRDDQQEENNPDWVKIKAWLDSKESSSVVYIGFGSESRLDQQDLTELAHGIELSGLPFFWALKDRKDGVSELPKGFEERTKQRGIVWKTWVPQIKILAHPSIGGCMSHCGASSVVEMLHLGHVLVTLPYILDQCLYARLLEEKKVAVEVPRSEQDGSFTRDSVAKTLRLVIVDEEGSTYRKNAKDMGNFFSSKALHNQYIKDLIAALQKHRVHSDN*