AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa1025600


Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa1025600 MtrunA17_Chr7g0243681 76.210 496 99 3 1 482 1 491 0.0 784
Msa1025600 MtrunA17_Chr7g0243931 76.707 498 102 2 1 484 7 504 0.0 784
Msa1025600 MtrunA17_Chr7g0243951 76.861 497 102 2 1 484 1 497 0.0 784
Msa1025600 MtrunA17_Chr7g0243861 77.666 497 97 2 2 484 5 501 0.0 781
Msa1025600 MtrunA17_Chr7g0243631 75.000 500 109 3 1 484 1 500 0.0 771
Msa1025600 MtrunA17_Chr4g0060511 72.854 501 119 3 1 484 1 501 0.0 744
Msa1025600 MtrunA17_Chr7g0243771 72.222 486 117 3 8 479 3 484 0.0 733
Msa1025600 MtrunA17_Chr7g0243801 71.602 493 118 4 1 479 1 485 0.0 729
Msa1025600 MtrunA17_Chr7g0243761 71.026 497 102 2 1 484 1 468 0.0 695
Msa1025600 MtrunA17_Chr7g0235051 71.831 497 97 2 1 484 1 467 0.0 695
Msa1025600 MtrunA17_Chr7g0243851 69.076 498 98 3 1 484 1 456 0.0 692
Msa1025600 MtrunA17_Chr7g0243781 64.588 497 151 5 1 482 1 487 0.0 646
Msa1025600 MtrunA17_Chr7g0243871 64.286 490 151 5 1 477 1 479 0.0 641
Msa1025600 MtrunA17_Chr5g0401851 51.738 489 220 3 5 478 4 491 3.03e-179 511
Msa1025600 MtrunA17_Chr8g0355221 52.772 487 214 4 5 477 9 493 5.78e-177 506
Msa1025600 MtrunA17_Chr7g0243811 60.750 400 131 3 23 409 1 387 1.99e-170 485
Msa1025600 MtrunA17_Chr1g0165701 51.120 491 223 5 5 482 9 495 1.51e-169 487
Msa1025600 MtrunA17_Chr5g0416741 50.728 481 220 5 8 474 10 487 4.21e-166 478
Msa1025600 MtrunA17_Chr6g0463891 49.177 486 232 4 9 480 10 494 8.62e-164 472
Msa1025600 MtrunA17_Chr7g0243611 70.323 310 65 2 126 422 1 296 2.80e-157 448
Msa1025600 MtrunA17_Chr7g0243711 82.812 256 31 1 242 484 75 330 6.10e-150 431
Msa1025600 MtrunA17_Chr7g0243711 86.076 79 11 0 1 79 1 79 2.47e-39 145
Msa1025600 MtrunA17_Chr5g0416821 46.869 495 229 6 5 480 4 483 4.64e-149 434
Msa1025600 MtrunA17_Chr4g0044501 44.196 491 243 10 1 473 1 478 6.69e-132 390
Msa1025600 MtrunA17_Chr8g0366391 43.967 489 249 7 1 473 1 480 1.86e-130 387
Msa1025600 MtrunA17_Chr4g0044511 40.871 482 258 8 7 472 36 506 2.80e-126 377
Msa1025600 MtrunA17_Chr4g0044521 42.204 481 246 7 8 473 6 469 6.59e-119 357
Msa1025600 MtrunA17_Chr4g0066261 39.563 503 267 10 1 479 1 490 4.97e-114 345
Msa1025600 MtrunA17_Chr4g0066151 40.733 491 247 7 10 477 17 486 5.15e-114 345
Msa1025600 MtrunA17_Chr7g0243921 75.000 212 48 1 2 213 31 237 5.56e-114 335
Msa1025600 MtrunA17_Chr4g0066221 39.053 507 263 9 1 479 1 489 6.72e-113 342
Msa1025600 MtrunA17_Chr4g0014061 39.337 483 271 5 10 479 8 481 1.33e-112 341
Msa1025600 MtrunA17_Chr7g0275681 40.126 476 262 9 11 470 12 480 1.90e-112 340
Msa1025600 MtrunA17_Chr4g0066171 40.041 492 247 11 10 479 20 485 3.32e-110 335
Msa1025600 MtrunA17_Chr4g0066201 40.162 493 244 11 10 478 17 482 1.50e-109 333
Msa1025600 MtrunA17_Chr4g0066131 40.081 494 250 9 10 479 12 483 1.99e-108 330
Msa1025600 MtrunA17_Chr8g0350881 39.959 493 259 8 10 479 11 489 8.49e-108 329
Msa1025600 MtrunA17_Chr8g0374901 39.474 494 258 9 9 479 12 487 1.70e-107 328
Msa1025600 MtrunA17_Chr4g0066281 40.083 484 249 9 14 479 15 475 2.39e-107 327
Msa1025600 MtrunA17_Chr7g0265041 39.069 494 271 11 1 470 1 488 5.14e-106 325
Msa1025600 MtrunA17_Chr8g0374971 38.540 493 266 6 10 479 11 489 9.22e-106 323
Msa1025600 MtrunA17_Chr4g0011051 37.860 486 281 8 9 474 7 491 3.32e-105 322
Msa1025600 MtrunA17_Chr5g0419761 39.184 490 270 10 10 475 8 493 1.28e-104 321
Msa1025600 MtrunA17_Chr7g0218311 39.165 503 248 12 10 479 15 492 1.19e-103 318
Msa1025600 MtrunA17_Chr5g0419771 37.876 499 267 10 6 474 31 516 1.80e-103 318
Msa1025600 MtrunA17_Chr2g0294931 39.105 514 254 12 1 479 1 490 5.77e-103 317
Msa1025600 MtrunA17_Chr6g0463851 38.235 510 249 13 1 471 1 483 5.59e-101 311
Msa1025600 MtrunA17_Chr1g0179901 35.630 508 282 12 1 477 7 500 7.22e-101 311
Msa1025600 MtrunA17_Chr7g0265141 38.677 499 261 14 1 469 1 484 1.02e-100 310
Msa1025600 MtrunA17_Chr8g0374931 37.965 511 260 11 1 477 1 488 1.96e-100 310
Msa1025600 MtrunA17_Chr7g0265151 37.475 499 267 14 1 470 1 483 4.91e-100 309
Msa1025600 MtrunA17_Chr6g0463861 38.095 504 255 14 1 474 1 477 2.61e-99 307
Msa1025600 MtrunA17_Chr7g0265101 35.960 495 285 9 9 479 7 493 4.68e-99 307
Msa1025600 MtrunA17_Chr4g0044481 42.482 419 194 8 11 415 27 412 5.18e-99 304
Msa1025600 MtrunA17_Chr7g0265051 37.074 499 272 13 9 479 7 491 6.58e-99 306
Msa1025600 MtrunA17_Chr8g0374941 40.082 489 260 8 9 477 949 1424 1.04e-98 324
Msa1025600 MtrunA17_Chr8g0374941 39.331 478 255 9 1 456 1 465 2.67e-92 306
Msa1025600 MtrunA17_Chr8g0374941 39.413 477 248 8 1 452 466 926 6.04e-92 305
Msa1025600 MtrunA17_Chr5g0428081 37.232 513 259 12 1 477 1 486 1.29e-98 305
Msa1025600 MtrunA17_Chr5g0410941 37.059 510 262 11 1 477 13 496 7.28e-97 301
Msa1025600 MtrunA17_Chr2g0294921 37.817 513 258 11 1 477 150 637 4.71e-96 303
Msa1025600 MtrunA17_Chr7g0265111 36.238 505 285 11 3 480 31 525 7.40e-96 300
Msa1025600 MtrunA17_Chr7g0243911 69.652 201 48 1 268 455 15 215 3.71e-94 284
Msa1025600 MtrunA17_Chr7g0231631 48.352 273 110 6 216 474 8 263 2.06e-73 233
Msa1025600 MtrunA17_Chr2g0294941 38.005 371 183 10 115 455 11 364 2.31e-65 215
Msa1025600 MtrunA17_Chr5g0440421 27.075 506 320 11 3 473 2 493 5.36e-60 204
Msa1025600 MtrunA17_Chr8g0361411 30.847 496 271 13 9 475 6 458 1.18e-57 197
Msa1025600 MtrunA17_Chr3g0078841 30.099 505 271 17 11 470 10 477 5.79e-55 191
Msa1025600 MtrunA17_Chr7g0231651 48.469 196 96 2 5 195 4 199 6.31e-54 180
Msa1025600 MtrunA17_Chr6g0454341 29.459 499 282 17 11 470 10 477 1.56e-53 187
Msa1025600 MtrunA17_Chr1g0207971 27.490 502 288 19 6 476 3 459 1.58e-53 186
Msa1025600 MtrunA17_Chr7g0243721 70.000 130 39 0 186 315 1 130 3.56e-53 176
Msa1025600 MtrunA17_Chr6g0464841 29.532 491 288 19 1 470 1 454 6.74e-53 184
Msa1025600 MtrunA17_Chr6g0464871 27.778 486 303 15 1 470 13 466 3.16e-52 183
Msa1025600 MtrunA17_Chr6g0464861 28.947 494 286 20 1 470 1 453 3.46e-52 182
Msa1025600 MtrunA17_Chr6g0454261 28.571 497 306 12 11 478 10 486 1.25e-51 182
Msa1025600 MtrunA17_Chr6g0454321 28.947 494 281 17 11 465 10 472 5.24e-51 183
Msa1025600 MtrunA17_Chr8g0336331 29.058 499 283 14 11 470 10 476 6.74e-51 180
Msa1025600 MtrunA17_Chr7g0250001 28.221 489 281 20 8 470 3 447 9.36e-51 179
Msa1025600 MtrunA17_Chr6g0454361 29.447 506 275 16 11 470 11 480 1.04e-50 179
Msa1025600 MtrunA17_Chr7g0217881 29.363 487 282 18 11 470 10 461 1.49e-50 179
Msa1025600 MtrunA17_Chr6g0464881 27.049 488 314 14 1 475 1 459 1.72e-50 178
Msa1025600 MtrunA17_Chr6g0454191 28.627 510 291 16 3 470 2 480 1.35e-49 176
Msa1025600 MtrunA17_Chr6g0464921 28.455 492 293 16 1 470 1 455 1.80e-49 176
Msa1025600 MtrunA17_Chr2g0278711 28.257 499 294 15 11 474 11 480 2.22e-49 176
Msa1025600 MtrunA17_Chr8g0377921 27.959 490 289 14 11 468 4 461 2.40e-49 175
Msa1025600 MtrunA17_Chr6g0454291 29.051 506 287 17 6 470 2 476 5.01e-49 175
Msa1025600 MtrunA17_Chr6g0454331 28.175 504 296 15 6 470 2 478 7.71e-49 174
Msa1025600 MtrunA17_Chr6g0454301 28.032 503 284 15 11 470 263 730 7.76e-49 178
Msa1025600 MtrunA17_Chr6g0454301 34.034 238 131 4 243 469 6 228 1.20e-29 122
Msa1025600 MtrunA17_Chr3g0098111 27.381 504 293 16 6 472 4 471 1.15e-48 174
Msa1025600 MtrunA17_Chr5g0448521 27.621 496 290 14 9 468 3 465 1.27e-48 174
Msa1025600 MtrunA17_Chr2g0329111 26.804 485 283 16 12 456 7 459 1.27e-48 174
Msa1025600 MtrunA17_Chr6g0454401 27.961 515 288 18 3 470 2 480 1.94e-48 173
Msa1025600 MtrunA17_Chr7g0249931 28.081 495 280 20 6 470 35 483 3.16e-48 173
Msa1025600 MtrunA17_Chr2g0307961 30.165 484 286 15 11 470 13 468 4.59e-48 172
Msa1025600 MtrunA17_Chr6g0454151 28.543 501 284 17 11 470 10 477 6.01e-48 172
Msa1025600 MtrunA17_Chr6g0453951 28.457 499 289 17 11 470 57 526 7.96e-48 172
Msa1025600 MtrunA17_Chr5g0414331 28.427 496 284 19 1 470 3 453 1.05e-47 171
Msa1025600 MtrunA17_Chr5g0426431 29.518 498 291 16 6 470 7 477 1.31e-47 171
Msa1025600 MtrunA17_Chr6g0454141 27.600 500 292 17 11 470 10 479 1.40e-47 171
Msa1025600 MtrunA17_Chr1g0161351 27.397 511 297 19 1 474 28 501 2.33e-47 171
Msa1025600 MtrunA17_Chr8g0357361 45.274 201 94 4 214 403 60 255 7.49e-47 163
Msa1025600 MtrunA17_Chr6g0454181 28.063 506 298 18 3 470 2 479 1.17e-46 168
Msa1025600 MtrunA17_Chr8g0380531 29.920 498 277 21 4 471 3 458 1.59e-46 167
Msa1025600 MtrunA17_Chr1g0207981 28.049 492 308 14 2 470 4 472 1.60e-46 168
Msa1025600 MtrunA17_Chr6g0454201 28.770 504 281 16 11 470 11 480 2.83e-46 167
Msa1025600 MtrunA17_Chr5g0414321 27.856 499 293 18 1 475 1 456 4.01e-46 167
Msa1025600 MtrunA17_Chr3g0112771 28.942 501 291 17 1 478 1 459 4.32e-46 166
Msa1025600 MtrunA17_Chr6g0462551 31.224 490 272 18 12 468 5 462 6.18e-46 166
Msa1025600 MtrunA17_Chr3g0118711 26.863 510 303 15 1 470 1 480 1.56e-45 166
Msa1025600 MtrunA17_Chr6g0454121 27.811 507 281 16 11 470 10 478 2.75e-45 165
Msa1025600 MtrunA17_Chr7g0249981 27.071 495 293 18 1 470 15 466 5.25e-45 164
Msa1025600 MtrunA17_Chr3g0118691 28.884 502 281 19 11 470 15 482 5.63e-45 164
Msa1025600 MtrunA17_Chr8g0359821 27.495 491 302 12 11 470 10 477 6.57e-45 164
Msa1025600 MtrunA17_Chr3g0118671 27.711 498 296 14 9 470 4 473 7.15e-45 164
Msa1025600 MtrunA17_Chr3g0092641 28.112 498 298 16 6 470 7 477 1.88e-44 162
Msa1025600 MtrunA17_Chr1g0207861 26.800 500 301 18 6 472 3 470 2.17e-44 162
Msa1025600 MtrunA17_Chr3g0121991 26.892 502 300 17 11 475 79 550 4.78e-44 162
Msa1025600 MtrunA17_Chr4g0053501 27.344 512 308 15 1 483 1 477 8.23e-44 161
Msa1025600 MtrunA17_Chr4g0050341 29.142 501 287 17 11 471 19 491 9.89e-44 160
Msa1025600 MtrunA17_Chr1g0159551 28.778 483 272 14 6 459 9 448 1.53e-43 159
Msa1025600 MtrunA17_Chr6g0453961 27.525 505 287 15 11 470 19 489 2.20e-43 160
Msa1025600 MtrunA17_Chr3g0118701 27.416 507 282 18 11 470 15 482 2.83e-43 159
Msa1025600 MtrunA17_Chr1g0173121 29.293 495 257 20 6 459 9 451 4.72e-43 158
Msa1025600 MtrunA17_Chr3g0118771 27.565 497 294 14 11 470 21 488 5.67e-43 159
Msa1025600 MtrunA17_Chr6g0454211 27.525 505 302 16 3 470 289 766 6.31e-43 162
Msa1025600 MtrunA17_Chr6g0454211 25.287 261 154 8 129 374 2 236 1.76e-17 85.5
Msa1025600 MtrunA17_Chr1g0207951 27.347 490 287 19 10 471 123 571 8.88e-43 162
Msa1025600 MtrunA17_Chr1g0207951 27.329 483 300 17 10 470 655 1108 3.02e-42 160
Msa1025600 MtrunA17_Chr6g0454131 26.453 499 314 12 3 470 2 478 1.11e-42 157
Msa1025600 MtrunA17_Chr5g0420801 27.711 498 292 19 6 473 2 461 2.05e-42 156
Msa1025600 MtrunA17_Chr6g0454351 28.032 503 269 20 11 470 12 464 2.06e-42 157
Msa1025600 MtrunA17_Chr4g0066141 47.647 170 88 1 311 479 191 360 2.24e-42 154
Msa1025600 MtrunA17_Chr4g0066141 36.683 199 106 5 39 235 8 188 1.42e-26 110
Msa1025600 MtrunA17_Chr7g0218821 28.184 479 294 14 11 471 5 451 5.32e-42 155
Msa1025600 MtrunA17_Chr7g0243731 81.250 80 15 0 327 406 1 80 6.20e-42 144
Msa1025600 MtrunA17_Chr8g0347281 28.189 486 282 16 12 466 19 468 6.41e-42 155
Msa1025600 MtrunA17_Chr7g0218841 28.361 476 278 15 11 467 6 437 9.01e-42 154
Msa1025600 MtrunA17_Chr5g0423981 27.291 491 270 15 11 470 10 444 9.42e-42 154
Msa1025600 MtrunA17_Chr3g0112761 26.735 490 287 12 11 473 8 452 1.47e-41 154
Msa1025600 MtrunA17_Chr1g0207831 25.761 493 300 19 10 471 7 464 1.53e-41 154
Msa1025600 MtrunA17_Chr8g0377941 27.778 486 304 17 6 470 2 461 1.88e-41 154
Msa1025600 MtrunA17_Chr5g0431361 26.569 478 317 12 3 472 4 455 4.01e-41 153
Msa1025600 MtrunA17_Chr3g0122001 26.653 499 295 17 11 470 486 952 4.10e-41 157
Msa1025600 MtrunA17_Chr3g0122001 25.502 498 309 15 11 473 6 476 2.45e-39 152
Msa1025600 MtrunA17_Chr7g0218831 28.000 475 280 15 11 467 6 436 4.25e-41 152
Msa1025600 MtrunA17_Chr8g0365811 24.800 500 323 12 1 472 485 959 7.17e-41 156
Msa1025600 MtrunA17_Chr8g0365811 26.407 462 264 16 6 425 4 431 2.10e-37 146
Msa1025600 MtrunA17_Chr6g0452771 27.237 503 290 16 11 470 10 479 1.06e-40 152
Msa1025600 MtrunA17_Chr7g0275511 28.974 497 270 18 12 466 16 471 1.13e-40 152
Msa1025600 MtrunA17_Chr7g0232411 34.982 283 137 8 217 473 207 468 1.90e-40 151
Msa1025600 MtrunA17_Chr8g0347271 28.601 486 280 17 12 466 20 469 1.97e-40 151
Msa1025600 MtrunA17_Chr5g0442541 26.113 494 294 18 11 468 5 463 2.65e-40 150
Msa1025600 MtrunA17_Chr8g0339451 30.476 420 213 15 93 466 73 459 3.03e-40 150
Msa1025600 MtrunA17_Chr8g0369341 28.088 502 295 19 6 473 2 471 4.10e-40 150
Msa1025600 MtrunA17_Chr4g0053321 26.285 506 301 15 9 479 24 492 4.96e-40 150
Msa1025600 MtrunA17_Chr5g0442521 27.254 488 304 15 12 468 6 473 1.00e-39 149
Msa1025600 MtrunA17_Chr1g0207931 25.506 494 260 15 5 471 86 498 1.03e-39 150
Msa1025600 MtrunA17_Chr8g0382021 26.939 490 277 19 16 467 39 485 1.27e-39 149
Msa1025600 MtrunA17_Chr8g0370941 27.027 518 269 19 11 463 8 481 1.62e-39 149
Msa1025600 MtrunA17_Chr5g0431421 26.526 475 308 14 8 472 7 450 1.93e-39 148
Msa1025600 MtrunA17_Chr7g0232391 35.484 279 133 8 217 469 207 464 2.15e-39 148
Msa1025600 MtrunA17_Chr7g0218791 27.551 490 276 17 11 469 5 446 3.30e-39 147
Msa1025600 MtrunA17_Chr8g0339601 31.805 349 168 13 155 466 11 326 4.47e-39 144
Msa1025600 MtrunA17_Chr8g0336691 37.545 277 145 8 201 474 665 916 7.07e-39 151
Msa1025600 MtrunA17_Chr8g0336691 36.594 276 129 8 217 466 1120 1375 6.93e-37 145
Msa1025600 MtrunA17_Chr8g0336691 34.667 300 150 8 201 474 198 477 1.64e-36 144
Msa1025600 MtrunA17_Chr8g0336651 37.692 260 132 7 217 474 547 778 7.36e-39 150
Msa1025600 MtrunA17_Chr8g0336651 35.254 295 135 7 204 466 969 1239 8.47e-38 147
Msa1025600 MtrunA17_Chr8g0336651 32.971 276 137 8 217 466 207 460 5.02e-31 127
Msa1025600 MtrunA17_Chr7g0218811 27.579 475 285 16 11 468 15 447 9.05e-39 146
Msa1025600 MtrunA17_Chr3g0118661 27.000 500 290 17 11 469 13 478 1.88e-38 146
Msa1025600 MtrunA17_Chr5g0412101 26.295 502 310 16 1 472 1 472 4.53e-38 145
Msa1025600 MtrunA17_Chr5g0431401 26.004 473 313 13 8 472 7 450 5.17e-38 144
Msa1025600 MtrunA17_Chr5g0431441 26.327 471 299 15 11 463 18 458 5.99e-38 144
Msa1025600 MtrunA17_Chr6g0459311 26.869 495 281 16 12 466 14 467 9.33e-38 144
Msa1025600 MtrunA17_Chr5g0442601 28.226 496 290 20 12 468 405 873 1.17e-37 147
Msa1025600 MtrunA17_Chr5g0442601 27.742 310 151 12 121 397 64 333 3.87e-21 97.1
Msa1025600 MtrunA17_Chr6g0462531 28.629 496 276 20 12 466 5 463 1.60e-37 143
Msa1025600 MtrunA17_Chr5g0429711 26.722 479 302 17 12 470 12 461 1.86e-37 143
Msa1025600 MtrunA17_Chr8g0339461 32.781 302 145 8 192 459 183 460 2.47e-37 142
Msa1025600 MtrunA17_Chr8g0361371 25.591 508 296 15 1 467 1 467 3.86e-37 142
Msa1025600 MtrunA17_Chr8g0335141 25.800 500 295 17 12 473 10 471 3.92e-37 142
Msa1025600 MtrunA17_Chr6g0454271 32.660 297 166 8 190 470 8 286 5.83e-37 137
Msa1025600 MtrunA17_Chr5g0412111 26.434 488 304 18 11 472 5 463 6.81e-37 141
Msa1025600 MtrunA17_Chr8g0335161 26.008 496 288 17 11 466 6 462 7.05e-37 141
Msa1025600 MtrunA17_Chr6g0454251 27.612 402 241 14 11 375 7 395 7.84e-37 140
Msa1025600 MtrunA17_Chr5g0442581 27.255 499 291 21 12 468 6 474 8.05e-37 142
Msa1025600 MtrunA17_Chr3g0079731 25.347 505 294 17 12 467 7 477 1.03e-36 141
Msa1025600 MtrunA17_Chr5g0412131 26.025 488 307 14 11 472 12 471 1.27e-36 140
Msa1025600 MtrunA17_Chr6g0462521 28.717 491 268 19 12 466 5 449 1.77e-36 140
Msa1025600 MtrunA17_Chr5g0442491 26.744 516 270 21 12 468 6 472 2.20e-36 140
Msa1025600 MtrunA17_Chr6g0486251 26.210 496 291 16 8 466 3 460 2.28e-36 140
Msa1025600 MtrunA17_Chr6g0486201 26.210 496 291 16 8 466 3 460 2.28e-36 140
Msa1025600 MtrunA17_Chr5g0442561 25.458 491 306 17 12 468 6 470 2.61e-36 140
Msa1025600 MtrunA17_Chr5g0431371 25.806 465 318 11 11 472 10 450 5.21e-36 139
Msa1025600 MtrunA17_Chr6g0462571 27.789 493 282 17 12 468 5 459 5.49e-36 139
Msa1025600 MtrunA17_Chr6g0449931 27.146 501 291 18 11 473 6 470 1.32e-35 138
Msa1025600 MtrunA17_Chr8g0373301 29.275 386 206 13 122 472 115 468 3.68e-35 136
Msa1025600 MtrunA17_Chr3g0118751 25.413 484 292 13 11 470 6 444 3.71e-35 136
Msa1025600 MtrunA17_Chr5g0409591 23.985 517 291 13 12 465 5 482 4.91e-35 136
Msa1025600 MtrunA17_Chr3g0106231 25.108 462 302 13 11 463 18 444 1.70e-34 135
Msa1025600 MtrunA17_Chr2g0278741 26.483 472 287 16 1 446 87 524 1.76e-34 135
Msa1025600 MtrunA17_Chr8g0339631 29.117 419 233 16 93 474 81 472 2.32e-34 134
Msa1025600 MtrunA17_Chr8g0334831 25.296 506 291 16 12 467 7 475 4.63e-34 134
Msa1025600 MtrunA17_Chr7g0232341 32.168 286 146 8 217 475 207 471 4.66e-34 133
Msa1025600 MtrunA17_Chr8g0334851 31.858 339 163 12 173 475 168 474 4.94e-34 133
Msa1025600 MtrunA17_Chr2g0278721 27.331 472 277 18 4 446 8 442 6.95e-34 135
Msa1025600 MtrunA17_Chr2g0278721 25.000 464 295 15 10 446 516 953 4.69e-25 109
Msa1025600 MtrunA17_Chr5g0432731 29.773 309 196 7 171 473 6 299 1.03e-33 129
Msa1025600 MtrunA17_Chr8g0339441 37.273 220 98 4 275 466 218 425 1.77e-33 131
Msa1025600 MtrunA17_Chr7g0232401 29.188 394 203 16 108 472 123 469 1.81e-33 132
Msa1025600 MtrunA17_Chr7g0232331 33.099 284 142 9 217 473 207 469 3.37e-33 131
Msa1025600 MtrunA17_Chr5g0393591 25.149 505 271 18 11 483 17 446 3.65e-33 130
Msa1025600 MtrunA17_Chr5g0442511 31.081 296 161 9 203 471 215 494 4.42e-33 131
Msa1025600 MtrunA17_Chr6g0454221 35.146 239 128 5 243 469 6 229 5.76e-33 127
Msa1025600 MtrunA17_Chr7g0241781 26.813 455 260 16 9 446 7 405 9.68e-33 129
Msa1025600 MtrunA17_Chr7g0232311 34.657 277 132 7 217 467 207 460 9.98e-33 129
Msa1025600 MtrunA17_Chr1g0153451 34.783 276 131 8 217 466 207 459 1.19e-32 129
Msa1025600 MtrunA17_Chr6g0454171 29.139 302 186 8 175 470 30 309 1.22e-32 126
Msa1025600 MtrunA17_Chr6g0462541 38.073 218 99 5 271 468 260 461 1.34e-32 129
Msa1025600 MtrunA17_Chr5g0403641 25.703 498 274 18 9 466 57 498 1.78e-32 129
Msa1025600 MtrunA17_Chr1g0196851 25.532 470 265 15 8 439 46 468 1.88e-32 129
Msa1025600 MtrunA17_Chr2g0302961 24.850 499 304 15 8 470 2 465 1.91e-32 129
Msa1025600 MtrunA17_Chr8g0336741 26.358 497 287 16 9 466 11 467 3.22e-32 128
Msa1025600 MtrunA17_Chr8g0336731 33.213 277 137 8 217 467 233 487 7.99e-32 127
Msa1025600 MtrunA17_Chr7g0241801 26.166 493 257 16 9 482 7 411 1.17e-31 126
Msa1025600 MtrunA17_Chr5g0429681 24.845 483 307 16 12 468 45 497 1.47e-31 127
Msa1025600 MtrunA17_Chr8g0334861 33.453 278 137 7 217 467 204 460 1.72e-31 126
Msa1025600 MtrunA17_Chr1g0153461 35.217 230 104 6 273 473 2 215 2.40e-31 120
Msa1025600 MtrunA17_Chr4g0032331 25.391 512 284 22 1 472 1 454 5.12e-31 124
Msa1025600 MtrunA17_Chr3g0106251 31.855 248 152 5 219 463 53 286 1.82e-30 120
Msa1025600 MtrunA17_Chr4g0069611 25.410 488 306 16 10 478 14 462 3.15e-30 122
Msa1025600 MtrunA17_Chr3g0118721 31.353 303 139 8 182 470 42 289 4.41e-30 119
Msa1025600 MtrunA17_Chr5g0401721 25.051 487 318 14 9 470 6 470 4.70e-30 122
Msa1025600 MtrunA17_Chr4g0072771 26.854 499 276 18 9 472 23 467 5.84e-30 122
Msa1025600 MtrunA17_Chr7g0249961 33.945 218 115 6 265 470 59 259 3.10e-29 115
Msa1025600 MtrunA17_Chr4g0029131 25.166 453 265 16 7 429 8 416 3.42e-29 121
Msa1025600 MtrunA17_Chr8g0336251 24.946 461 301 12 6 444 2 439 3.50e-29 119
Msa1025600 MtrunA17_Chr8g0336321 24.946 461 301 12 6 444 2 439 3.74e-29 119
Msa1025600 MtrunA17_Chr2g0302991 25.355 493 306 18 8 470 2 462 5.16e-29 119
Msa1025600 MtrunA17_Chr4g0040691 24.059 478 278 13 6 445 3 433 8.23e-29 118
Msa1025600 MtrunA17_Chr4g0072761 25.352 497 280 19 7 467 11 452 8.38e-29 118
Msa1025600 MtrunA17_Chr6g0464091 27.139 409 263 13 10 398 17 410 1.13e-28 118
Msa1025600 MtrunA17_Chr5g0426401 29.592 294 166 8 176 449 16 288 3.37e-28 114
Msa1025600 MtrunA17_Chr6g0466831 24.508 457 292 15 10 446 17 440 3.40e-28 117
Msa1025600 MtrunA17_Chr6g0466841 24.070 457 294 15 10 446 17 440 7.39e-27 113
Msa1025600 MtrunA17_Chr2g0302851 25.966 466 274 18 10 446 15 438 7.68e-27 112
Msa1025600 MtrunA17_Chr8g0355011 26.790 377 186 12 121 470 48 361 2.39e-26 110
Msa1025600 MtrunA17_Chr1g0207881 23.207 474 257 17 10 471 7 385 3.03e-26 110
Msa1025600 MtrunA17_Chr6g0482061 27.711 498 287 23 1 457 1 466 3.48e-26 111
Msa1025600 MtrunA17_Chr4g0040711 23.542 480 278 15 6 445 3 433 9.95e-26 109
Msa1025600 MtrunA17_Chr6g0454371 36.774 155 83 3 316 470 31 170 1.83e-25 102
Msa1025600 MtrunA17_Chr2g0319761 23.368 475 302 14 10 459 7 444 2.60e-25 108
Msa1025600 MtrunA17_Chr5g0448551 25.424 413 252 17 12 397 8 391 3.52e-25 107
Msa1025600 MtrunA17_Chr4g0042931 26.326 509 288 20 6 472 2 465 6.05e-25 107
Msa1025600 MtrunA17_Chr3g0079711 34.518 197 85 6 301 467 3 185 6.48e-25 101
Msa1025600 MtrunA17_Chr8g0337381 39.286 140 71 3 335 473 2 128 8.27e-25 99.8
Msa1025600 MtrunA17_Chr2g0283041 24.400 500 293 19 8 470 4 455 4.10e-24 104
Msa1025600 MtrunA17_Chr2g0319751 24.107 448 283 12 10 445 7 409 5.09e-24 105
Msa1025600 MtrunA17_Chr2g0319751 23.441 465 289 13 10 445 484 910 3.01e-21 97.4
Msa1025600 MtrunA17_Chr4g0029151 21.399 486 264 14 7 439 16 436 5.93e-24 104
Msa1025600 MtrunA17_Chr6g0454231 30.859 256 127 10 219 470 9 218 1.01e-23 103
Msa1025600 MtrunA17_Chr4g0042891 24.752 505 303 19 6 472 2 467 2.79e-23 102
Msa1025600 MtrunA17_Chr8g0367221 26.277 411 248 15 10 389 797 1183 3.46e-23 103
Msa1025600 MtrunA17_Chr8g0367221 24.515 412 253 14 10 389 11 396 4.99e-19 90.9
Msa1025600 MtrunA17_Chr8g0367221 29.384 211 118 9 277 472 1548 1742 2.52e-12 69.7
Msa1025600 MtrunA17_Chr4g0039881 24.946 461 261 18 21 445 2 413 4.72e-23 101
Msa1025600 MtrunA17_Chr2g0319791 22.581 465 293 15 10 445 7 433 8.59e-23 100
Msa1025600 MtrunA17_Chr2g0319731 22.917 480 291 14 1 445 15 450 9.81e-23 100
Msa1025600 MtrunA17_Chr3g0092031 32.967 182 97 6 277 446 6 174 3.66e-22 94.4
Msa1025600 MtrunA17_Chr8g0336261 40.909 110 52 1 327 436 41 137 3.28e-21 89.7
Msa1025600 MtrunA17_Chr5g0431431 30.622 209 121 5 219 425 157 343 4.92e-21 94.4
Msa1025600 MtrunA17_Chr7g0250021 26.706 337 188 16 6 320 7 306 1.10e-19 90.1
Msa1025600 MtrunA17_Chr4g0029161 23.077 442 260 13 7 429 8 388 1.14e-19 91.3
Msa1025600 MtrunA17_Chr7g0232351 35.870 184 80 6 217 374 207 378 1.95e-19 90.1
Msa1025600 MtrunA17_Chr5g0427571 26.749 243 140 7 222 444 49 273 1.21e-16 80.5
Msa1025600 MtrunA17_Chr6g0477011 25.407 307 207 6 10 312 15 303 4.46e-16 79.0
Msa1025600 MtrunA17_Chr4g0066231 48.052 77 40 0 373 449 1 77 5.28e-16 72.8
Msa1025600 MtrunA17_Chr2g0319801 29.897 194 104 6 271 445 253 433 1.18e-15 79.3
Msa1025600 MtrunA17_Chr7g0272701 32.540 126 82 2 102 224 27 152 1.79e-14 70.9
Msa1025600 MtrunA17_Chr6g0454391 37.209 86 41 1 346 431 8 80 7.84e-12 62.4
Msa1025600 MtrunA17_Chr5g0426411 28.834 163 105 6 5 163 6 161 7.96e-12 63.9
Msa1025600 MtrunA17_Chr8g0336271 24.696 247 141 9 11 229 10 239 9.14e-11 62.8
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa1025600 AT2G15490.3 38.900 491 267 8 6 474 2 481 1.50e-120 362
Msa1025600 AT2G36770.1 39.839 497 272 8 2 477 5 495 1.77e-120 362
Msa1025600 AT2G15490.1 38.664 494 267 8 6 474 2 484 7.85e-120 360
Msa1025600 AT2G36800.1 40.779 488 257 11 10 473 11 490 9.38e-118 355
Msa1025600 AT2G15480.1 38.259 494 272 9 3 474 2 484 4.15e-117 353
Msa1025600 AT2G15480.2 38.523 501 271 11 3 474 2 494 6.64e-117 353
Msa1025600 AT4G34131.1 39.919 496 256 13 3 472 2 481 1.26e-116 352
Msa1025600 AT2G36790.1 39.959 488 266 9 10 476 12 493 7.54e-116 350
Msa1025600 AT2G36780.1 38.990 495 279 8 2 477 5 495 1.41e-115 349
Msa1025600 AT4G34135.1 40.162 493 264 11 1 472 1 483 3.94e-115 348
Msa1025600 AT2G36750.1 39.673 489 267 9 10 477 9 490 2.21e-114 346
Msa1025600 AT2G36760.1 38.554 498 279 9 2 478 5 496 1.07e-113 345
Msa1025600 AT4G34138.1 37.854 494 267 9 8 477 8 485 1.10e-104 321
Msa1025600 AT3G53160.1 36.270 488 280 11 6 470 3 482 6.39e-99 306
Msa1025600 AT3G53150.1 35.842 505 284 8 1 470 10 509 5.00e-96 300
Msa1025600 AT4G34135.2 38.125 320 187 5 1 312 1 317 1.09e-70 228
Msa1025600 AT5G14860.1 32.525 495 272 18 11 470 8 475 1.18e-62 212
Msa1025600 AT2G16890.2 31.400 500 284 18 11 481 9 478 1.96e-58 200
Msa1025600 AT1G10400.1 31.535 482 286 14 9 470 5 462 9.42e-58 198
Msa1025600 AT1G22400.1 30.980 510 297 17 1 477 1 488 2.15e-57 198
Msa1025600 AT1G22380.1 31.172 478 265 17 11 451 13 463 2.69e-55 192
Msa1025600 AT1G22340.1 29.901 505 289 18 1 467 1 478 4.24e-54 189
Msa1025600 AT2G16890.3 31.663 439 243 16 11 421 9 418 4.66e-52 182
Msa1025600 AT1G22360.1 28.431 510 292 16 1 470 1 477 9.54e-52 182
Msa1025600 AT5G03490.1 28.866 485 285 16 11 473 19 465 2.05e-50 179
Msa1025600 AT1G78270.1 29.273 509 280 18 6 470 8 480 3.00e-49 176
Msa1025600 AT1G22370.2 29.882 425 256 14 6 401 8 419 6.70e-49 175
Msa1025600 AT1G73880.1 27.745 501 305 17 2 477 5 473 6.75e-49 175
Msa1025600 AT1G22360.2 29.091 440 254 13 1 401 1 421 3.72e-48 172
Msa1025600 AT3G02100.1 28.485 495 291 18 3 472 5 461 6.46e-47 169
Msa1025600 AT4G15490.1 27.236 492 293 15 11 470 8 466 3.39e-45 165
Msa1025600 AT1G51210.1 28.289 456 265 18 11 446 20 433 5.32e-45 163
Msa1025600 AT2G31750.1 27.572 486 287 18 11 470 8 454 2.54e-44 162
Msa1025600 AT2G31750.2 27.572 486 287 18 11 470 8 454 3.13e-44 162
Msa1025600 AT1G05675.1 27.696 473 297 12 11 467 6 449 2.94e-43 159
Msa1025600 AT5G12890.1 25.403 496 314 13 8 469 7 480 4.93e-43 159
Msa1025600 AT4G15500.1 26.559 497 293 21 11 474 9 466 7.12e-43 158
Msa1025600 AT4G01070.1 29.505 505 276 20 11 475 8 472 9.30e-43 158
Msa1025600 AT1G24100.1 28.690 481 289 18 11 470 11 458 1.31e-42 157
Msa1025600 AT3G11340.1 28.016 489 275 16 12 473 9 447 1.38e-42 157
Msa1025600 AT1G06000.1 27.105 487 265 16 11 470 10 433 1.79e-42 156
Msa1025600 AT2G30150.2 27.459 488 284 16 11 473 13 455 2.38e-42 156
Msa1025600 AT5G05870.1 26.804 485 304 13 5 470 2 454 2.80e-42 156
Msa1025600 AT4G15480.1 27.129 505 298 20 1 470 9 478 5.84e-42 156
Msa1025600 AT1G01420.2 28.543 501 281 19 1 463 1 462 2.40e-41 154
Msa1025600 AT5G05860.1 26.186 485 287 16 4 463 2 440 3.22e-41 153
Msa1025600 AT5G26310.1 27.059 510 275 20 11 471 7 468 6.13e-41 153
Msa1025600 AT2G30150.1 27.066 484 283 16 15 473 1 439 8.99e-41 152
Msa1025600 AT1G01420.1 28.745 494 275 19 8 463 5 459 1.26e-40 152
Msa1025600 AT3G21560.1 26.994 489 300 19 11 470 12 472 3.37e-40 151
Msa1025600 AT3G50740.1 27.539 512 280 21 11 473 7 476 6.55e-40 150
Msa1025600 AT5G05880.1 26.243 503 284 15 5 473 2 451 7.48e-40 149
Msa1025600 AT2G43840.1 27.122 483 288 18 11 471 7 447 1.80e-39 148
Msa1025600 AT2G43820.1 26.804 485 297 17 7 472 3 448 2.14e-39 148
Msa1025600 AT5G05900.1 27.122 483 288 16 8 468 5 445 2.34e-39 148
Msa1025600 AT2G43840.2 26.915 483 289 18 11 471 7 447 3.57e-39 147
Msa1025600 AT2G29730.1 25.651 499 301 16 10 474 4 466 3.92e-39 148
Msa1025600 AT1G05680.1 27.004 474 299 13 11 467 6 449 4.49e-39 147
Msa1025600 AT2G18570.1 26.347 501 285 21 8 465 2 461 2.27e-38 146
Msa1025600 AT4G15550.1 26.465 495 293 17 11 469 13 472 2.28e-38 146
Msa1025600 AT2G28080.1 26.250 480 304 14 15 472 22 473 4.90e-38 145
Msa1025600 AT3G21760.1 26.265 514 292 18 9 470 2 480 8.58e-38 144
Msa1025600 AT2G30140.1 26.598 485 286 15 8 467 9 448 8.97e-38 144
Msa1025600 AT2G15490.2 32.275 189 120 2 6 186 2 190 2.96e-37 138
Msa1025600 AT2G15490.2 32.540 126 78 3 350 474 151 270 6.86e-12 66.2
Msa1025600 AT3G55700.1 26.380 489 291 15 11 473 8 453 5.39e-37 142
Msa1025600 AT5G05890.1 25.000 504 293 13 5 473 2 455 7.89e-37 141
Msa1025600 AT2G31790.1 25.873 487 290 15 11 467 8 453 7.89e-37 141
Msa1025600 AT5G59590.1 24.750 501 294 16 1 470 1 449 9.40e-37 141
Msa1025600 AT4G14090.1 25.904 498 284 17 6 469 8 454 1.06e-36 141
Msa1025600 AT2G30140.2 26.598 485 285 16 8 467 9 447 1.15e-36 141
Msa1025600 AT4G36770.1 27.530 494 262 19 9 456 2 445 1.32e-36 140
Msa1025600 AT2G36970.1 25.000 516 309 16 1 477 1 477 1.50e-36 141
Msa1025600 AT5G66690.1 25.581 516 279 17 11 473 7 470 2.11e-36 140
Msa1025600 AT3G16520.3 28.723 376 203 13 122 467 116 456 4.98e-36 139
Msa1025600 AT3G21800.1 25.344 509 299 17 8 470 2 475 6.31e-36 139
Msa1025600 AT3G46680.1 24.897 486 290 16 11 468 9 447 9.63e-36 138
Msa1025600 AT2G29740.1 26.772 508 300 19 1 470 1 474 2.27e-35 137
Msa1025600 AT3G46700.1 26.327 490 281 16 11 472 9 446 2.60e-35 137
Msa1025600 AT3G21790.1 26.121 513 292 19 9 470 2 478 3.36e-35 137
Msa1025600 AT3G46660.1 27.733 494 275 17 12 473 15 458 8.20e-35 135
Msa1025600 AT1G07240.1 25.000 496 309 14 12 470 6 475 1.74e-34 135
Msa1025600 AT3G21780.1 23.705 502 308 17 9 470 2 468 1.91e-34 135
Msa1025600 AT2G23250.1 28.145 469 277 18 21 470 8 435 2.02e-34 134
Msa1025600 AT1G05530.1 25.102 490 301 14 9 470 3 454 3.38e-34 134
Msa1025600 AT5G38010.1 25.197 508 287 16 1 470 1 453 3.56e-34 134
Msa1025600 AT5G59580.1 25.202 496 284 17 11 473 9 450 4.17e-34 134
Msa1025600 AT3G46670.1 25.806 496 282 16 11 473 9 451 5.72e-34 133
Msa1025600 AT3G16520.1 28.571 364 195 13 122 455 116 444 7.03e-34 133
Msa1025600 AT3G16520.2 28.571 364 195 13 122 455 116 444 7.74e-34 133
Msa1025600 AT4G15260.1 27.467 375 209 11 132 470 7 354 9.44e-34 130
Msa1025600 AT1G07250.1 27.027 518 273 22 9 470 4 472 1.45e-33 132
Msa1025600 AT3G55710.1 26.844 488 300 15 11 476 8 460 2.88e-32 129
Msa1025600 AT1G07260.1 25.000 500 305 17 9 470 4 471 2.88e-32 129
Msa1025600 AT2G23260.1 26.501 483 297 19 9 470 8 453 2.95e-32 128
Msa1025600 AT4G15280.2 25.239 523 295 21 1 470 26 505 4.66e-32 129
Msa1025600 AT2G29710.1 25.755 497 291 20 12 470 6 462 5.00e-32 128
Msa1025600 AT3G46650.1 25.263 475 274 15 11 463 10 425 1.75e-31 126
Msa1025600 AT4G15280.1 25.437 515 288 21 9 470 2 473 1.97e-31 126
Msa1025600 AT1G01390.1 28.486 502 275 20 8 467 5 464 2.18e-31 126
Msa1025600 AT1G01390.2 28.947 494 267 20 8 459 22 473 2.86e-31 126
Msa1025600 AT1G22370.1 33.333 234 126 7 190 401 24 249 5.67e-31 122
Msa1025600 AT2G26480.1 25.558 493 277 17 9 467 6 442 6.97e-31 124
Msa1025600 AT3G21750.1 25.911 494 307 17 9 470 2 468 2.32e-30 123
Msa1025600 AT2G18560.1 31.308 214 114 5 275 465 168 371 5.18e-30 120
Msa1025600 AT5G65550.1 26.316 475 282 19 9 447 7 449 5.43e-30 122
Msa1025600 AT2G16890.4 31.153 321 181 12 11 312 9 308 5.85e-30 119
Msa1025600 AT2G16890.1 31.153 321 181 12 11 312 9 308 5.85e-30 119
Msa1025600 AT3G46690.1 24.540 489 296 13 11 472 9 451 1.59e-29 120
Msa1025600 AT1G05560.1 25.304 494 288 19 11 470 5 451 2.40e-29 120
Msa1025600 AT1G05560.2 25.304 494 288 19 11 470 55 501 2.85e-29 120
Msa1025600 AT5G38040.1 24.738 477 289 12 19 470 18 449 2.93e-29 120
Msa1025600 AT3G46720.1 25.410 488 284 15 11 472 9 442 2.94e-29 120
Msa1025600 AT2G29750.1 25.948 501 295 20 11 470 8 473 5.15e-29 119
Msa1025600 AT5G49690.1 24.440 491 305 17 10 478 9 455 1.30e-28 118
Msa1025600 AT1G30530.1 27.083 480 289 20 11 470 12 450 7.27e-28 116
Msa1025600 AT3G29630.1 25.410 488 303 16 8 477 3 447 8.48e-27 112
Msa1025600 AT3G29630.2 26.078 487 275 18 8 477 3 421 1.14e-26 112
Msa1025600 AT5G17050.1 23.156 488 304 16 11 470 12 456 9.52e-26 110
Msa1025600 AT5G17030.1 24.649 499 294 19 5 470 6 455 3.70e-25 108
Msa1025600 AT4G27570.1 25.110 454 264 17 9 434 5 410 1.19e-24 106
Msa1025600 AT5G17040.1 23.810 483 297 17 11 470 5 439 1.46e-24 106
Msa1025600 AT5G17040.2 29.699 266 154 8 214 470 96 337 3.75e-24 103
Msa1025600 AT4G27560.1 25.221 452 266 18 9 434 5 410 2.48e-23 102
Msa1025600 AT3G22250.1 24.124 485 283 18 12 454 9 450 1.11e-22 100
Msa1025600 AT1G50580.1 25.957 470 258 20 8 444 3 415 6.28e-22 98.6
Msa1025600 AT2G22590.1 24.364 472 285 15 8 445 12 445 2.18e-21 97.1
Msa1025600 AT1G64910.1 23.133 415 261 12 10 403 5 382 8.34e-21 95.1
Msa1025600 AT5G54010.1 23.899 477 268 20 8 451 3 417 4.75e-19 90.1
Msa1025600 AT5G53990.1 23.656 465 264 18 10 441 5 411 7.93e-19 89.4
Msa1025600 AT1G64920.1 22.088 498 300 19 8 473 3 444 6.58e-18 86.7
Msa1025600 AT4G09500.1 23.144 458 261 17 9 445 4 391 2.02e-16 81.6
Msa1025600 AT5G37950.1 24.918 305 179 9 94 374 65 343 3.85e-16 80.1
Msa1025600 AT4G09500.2 23.305 472 268 18 9 445 4 416 5.36e-16 80.5
Msa1025600 AT5G37950.2 35.246 122 60 3 268 374 220 337 5.10e-15 76.6
Msa1025600 AT5G54060.1 19.840 499 319 16 8 467 10 466 1.47e-12 70.1
Msa1025600 AT4G01070.2 26.646 319 191 15 11 314 8 298 2.47e-11 65.5

Find 101 sgRNAs with CRISPR-Local

Find 258 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
AATCCTGCCGCTGCCTATTT+TGG 0.139831 7_1:+56377822 Msa1025600:CDS
GAGCAAAAGAACATAATTTA+TGG 0.225380 7_1:+56378466 Msa1025600:CDS
TCCTCATTTCTTTGCTCTCT+TGG 0.225932 7_1:-56378563 None:intergenic
GCAACTTCTCATTGTAAAAT+TGG 0.243211 7_1:-56378410 None:intergenic
GCCACTTCACTTGAAATTCT+TGG 0.268252 7_1:+56377495 Msa1025600:CDS
GTCTATACTTCATCATTAAA+TGG 0.271841 7_1:-56377695 None:intergenic
CAACAAGGTTAATGAGAAAA+AGG 0.298342 7_1:+56377983 Msa1025600:CDS
GGCACCACAGCTGTTGATAT+TGG 0.309956 7_1:+56378284 Msa1025600:CDS
AGGGCTATATCATATGGAAT+TGG 0.320112 7_1:+56378262 Msa1025600:CDS
AAGGATGAAAGAAAGCAAAA+AGG 0.321576 7_1:+56378242 Msa1025600:CDS
ACACAGAAATTTACAATTCC+TGG 0.324450 7_1:+56377741 Msa1025600:CDS
AGTCTTGCTGTGTCAATCAT+AGG 0.326235 7_1:-56377300 None:intergenic
GTCACAATCCCTCCGGTTGC+AGG 0.329054 7_1:-56378312 None:intergenic
GTGATGTAATAATGAATTCT+TGG 0.333100 7_1:-56377648 None:intergenic
AAACAACATGAAGTTGGTTA+TGG 0.334994 7_1:-56377245 None:intergenic
TTTCTTCCATTTCCCTCAGC+TGG 0.347602 7_1:+56377267 Msa1025600:CDS
AATTCTTGGAATACCTAGTT+TGG 0.351786 7_1:-56377634 None:intergenic
GGATGGCACAGTTGGAGAAT+TGG 0.354123 7_1:-56377674 None:intergenic
TTCATGCATTGGTCCAAAAT+AGG 0.360513 7_1:-56377835 None:intergenic
AAACTTAGTAAGACTACAAT+GGG 0.383326 7_1:+56377921 Msa1025600:CDS
GAAATCATTGAAGAAATCTA+AGG 0.391534 7_1:+56378677 Msa1025600:CDS
AACAACATGAAGTTGGTTAT+GGG 0.392319 7_1:-56377244 None:intergenic
AGCAAAAGAACATAATTTAT+GGG 0.402653 7_1:+56378467 Msa1025600:CDS
TTCTTTGCATGTAACCAATC+AGG 0.407903 7_1:-56377801 None:intergenic
TTGTTGATCCAAGCTGAAAC+TGG 0.411564 7_1:-56377966 None:intergenic
TGCAGAGAAAGTGGTGAGAA+GGG 0.417082 7_1:+56378500 Msa1025600:CDS
TCAAGGAGTAAGGATGCTTC+AGG 0.425756 7_1:+56377527 Msa1025600:CDS
TCTGTATTGTATGTATGTTT+TGG 0.426684 7_1:+56378080 Msa1025600:CDS
CTACACATGCCAATGCTTCA+AGG 0.435971 7_1:+56377358 Msa1025600:CDS
CTACAATGGGGATCAAATCT+TGG 0.436907 7_1:+56377934 Msa1025600:CDS
GAGCATGAGGAAACCTAGTA+TGG 0.437301 7_1:-56378106 None:intergenic
AAGAGGAAGAATGGCTAGAT+TGG 0.439920 7_1:+56378036 Msa1025600:CDS
ACCTTCCTCTATAGTCCTCT+TGG 0.448985 7_1:-56378613 None:intergenic
ATATGGCCAGCTGAGGGAAA+TGG 0.451965 7_1:-56377273 None:intergenic
GGGCTATATCATATGGAATT+GGG 0.452750 7_1:+56378263 Msa1025600:CDS
TCCTGCAAGAATTTGAGAAA+AGG 0.458681 7_1:+56378223 Msa1025600:CDS
CTCCTCTGGAAGTTCCTGAT+TGG 0.459643 7_1:+56377787 Msa1025600:CDS
ATAGACACTGACATCAGTTC+AGG 0.460139 7_1:+56377393 Msa1025600:CDS
TGTCAATCATAGGGTTCATA+TGG 0.461840 7_1:-56377290 None:intergenic
GTAAAATCATTCAAGGAGTA+AGG 0.462825 7_1:+56377517 Msa1025600:CDS
GAATCAGAGAAAAGAAGTTA+TGG 0.476056 7_1:+56377855 Msa1025600:CDS
ATGCAGAGAAAGTGGTGAGA+AGG 0.478166 7_1:+56378499 Msa1025600:CDS
GTGGAAGCAGCTGCCAAACT+AGG 0.478617 7_1:+56377621 Msa1025600:CDS
CATAGAGGAACTTGCGAAAG+AGG 0.483596 7_1:+56378019 Msa1025600:CDS
ATTCTTGGTAAAATCATTCA+AGG 0.484152 7_1:+56377510 Msa1025600:CDS
CATTAAATGGATGGCACAGT+TGG 0.487293 7_1:-56377682 None:intergenic
ACCAAGAATTTCAAGTGAAG+TGG 0.491909 7_1:-56377496 None:intergenic
AACACCGGCCACGTAATCAT+TGG 0.492199 7_1:-56378381 None:intergenic
TACAATTGAGATGACTCCTC+TGG 0.492446 7_1:+56377773 Msa1025600:CDS
ATATTGGAACACCCTGCAAC+CGG 0.495925 7_1:+56378300 Msa1025600:CDS
CAGTTCCCTTCAGCTCAAGT+TGG 0.509931 7_1:+56377441 Msa1025600:CDS
ACTATTGAAAGCATAAATGC+TGG 0.513228 7_1:+56378354 Msa1025600:CDS
GAGAAGGGAAGAGATAGTTA+AGG 0.514567 7_1:+56378515 Msa1025600:CDS
ATATCAGAGACTATGCAATC+TGG 0.516846 7_1:-56377582 None:intergenic
AACTTGCGAAAGAGGAAGAA+TGG 0.527218 7_1:+56378027 Msa1025600:CDS
AGGATGAGAGCAAAGAAACT+TGG 0.527542 7_1:+56378582 Msa1025600:CDS
GGGAGACCAACTTGAGCTGA+AGG 0.537436 7_1:-56377447 None:intergenic
TAACATTAATGCAGAGAAAG+TGG 0.537539 7_1:+56378491 Msa1025600:CDS
GCAGCTGCTTCCACTGTCCA+CGG 0.544498 7_1:-56377612 None:intergenic
GTCTTGCTGTGTCAATCATA+GGG 0.544513 7_1:-56377299 None:intergenic
TCACAATCCCTCCGGTTGCA+GGG 0.545569 7_1:-56378311 None:intergenic
GGTCCAAAATAGGCAGCGGC+AGG 0.551932 7_1:-56377825 None:intergenic
TTTGCCAATGATTACGTGGC+CGG 0.556848 7_1:+56378377 Msa1025600:CDS
CAACTTGTAGAAATTGCGCA+TGG 0.559449 7_1:+56378128 Msa1025600:CDS
ATACTTCATCATTAAATGGA+TGG 0.562120 7_1:-56377691 None:intergenic
GGGATCAAATCTTGGAGTGT+AGG 0.562776 7_1:+56377942 Msa1025600:CDS
ACCAAGAGAGCAAAGAAATG+AGG 0.564369 7_1:+56378562 Msa1025600:CDS
TCAATTGTATGAGGCAAACC+AGG 0.565982 7_1:-56377759 None:intergenic
GATAAAGATGAAGATGGAGA+TGG 0.566747 7_1:+56378198 Msa1025600:intron
TTGAAGAAATCTAAGGCACT+TGG 0.574510 7_1:+56378684 Msa1025600:CDS
GGAGTCATCTCAATTGTATG+AGG 0.575171 7_1:-56377768 None:intergenic
GTGTAGGACCAGTTTCAGCT+TGG 0.580002 7_1:+56377958 Msa1025600:CDS
GGATTGTGACTCATTGTGGT+TGG 0.583232 7_1:+56378325 Msa1025600:CDS
AACTTGTAGAAATTGCGCAT+GGG 0.583832 7_1:+56378129 Msa1025600:CDS
ATTTCTACAAGTTGAGCATG+AGG 0.596842 7_1:-56378119 None:intergenic
GCTCAAGTTGGTCTCCCTGA+CGG 0.597767 7_1:+56377453 Msa1025600:CDS
ATTGGCATGTGTAGTGATGA+TGG 0.600742 7_1:-56377349 None:intergenic
AAAACTTAGTAAGACTACAA+TGG 0.601608 7_1:+56377920 Msa1025600:CDS
AGGGTTCATATGGCCAGCTG+AGG 0.601679 7_1:-56377280 None:intergenic
GCAAGACTATTTGCAAAGCA+TGG 0.602004 7_1:+56377315 Msa1025600:CDS
TGCTGCCAAGAGGACTATAG+AGG 0.613396 7_1:+56378608 Msa1025600:CDS
ACAATGAGTCACAATCCCTC+CGG 0.620558 7_1:-56378319 None:intergenic
GGAGACCAACTTGAGCTGAA+GGG 0.621494 7_1:-56377446 None:intergenic
CATTGGTCCAAAATAGGCAG+CGG 0.626587 7_1:-56377829 None:intergenic
GGGTTCATATGGCCAGCTGA+GGG 0.630744 7_1:-56377279 None:intergenic
GCCAAGAGGACTATAGAGGA+AGG 0.631460 7_1:+56378612 Msa1025600:CDS
TAAAATTGGTCAGCAAACAC+CGG 0.633866 7_1:-56378396 None:intergenic
CTGGTTTGCCAATGATTACG+TGG 0.638379 7_1:+56378373 Msa1025600:CDS
AGTTTCAGCTTGGATCAACA+AGG 0.639613 7_1:+56377968 Msa1025600:CDS
TTGGAACACCCTGCAACCGG+AGG 0.640760 7_1:+56378303 Msa1025600:CDS
TTGAAGATAGGGATCCCTGT+AGG 0.641117 7_1:+56378444 Msa1025600:CDS
GGAGGGATTGTGACTCATTG+TGG 0.643212 7_1:+56378321 Msa1025600:CDS
TCAGAAACTAAATTATCATG+AGG 0.644747 7_1:-56377717 None:intergenic
TGGAACACCCTGCAACCGGA+GGG 0.662971 7_1:+56378304 Msa1025600:CDS
TGTTCCAATATCAACAGCTG+TGG 0.667359 7_1:-56378288 None:intergenic
AACTTGGTGATGCTGCCAAG+AGG 0.668809 7_1:+56378598 Msa1025600:CDS
AACCAATCAGGAACTTCCAG+AGG 0.675298 7_1:-56377789 None:intergenic
TCTCTGATATGATGTATCCG+TGG 0.682925 7_1:+56377595 Msa1025600:CDS
AAGAGGACTATAGAGGAAGG+TGG 0.683468 7_1:+56378615 Msa1025600:CDS
TATGATGTATCCGTGGACAG+TGG 0.722561 7_1:+56377602 Msa1025600:CDS
AACTTAGTAAGACTACAATG+GGG 0.812594 7_1:+56377922 Msa1025600:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! AAAAATGATAAAGATGAAGA+TGG + chr7_1:56378192-56378211 Msa1025600:intron 20.0%
!! AGCAAAAGAACATAATTTAT+GGG + chr7_1:56378467-56378486 Msa1025600:CDS 20.0%
!! AAAAATGATAAAGATGAAGA+TGG + chr7_1:56378192-56378211 Msa1025600:intron 20.0%
!! AGCAAAAGAACATAATTTAT+GGG + chr7_1:56378467-56378486 Msa1025600:CDS 20.0%
! ATTCTTGGTAAAATCATTCA+AGG + chr7_1:56377510-56377529 Msa1025600:CDS 25.0%
! GTGATGTAATAATGAATTCT+TGG - chr7_1:56377651-56377670 None:intergenic 25.0%
! ATACTTCATCATTAAATGGA+TGG - chr7_1:56377694-56377713 None:intergenic 25.0%
! GTCTATACTTCATCATTAAA+TGG - chr7_1:56377698-56377717 None:intergenic 25.0%
! TCAGAAACTAAATTATCATG+AGG - chr7_1:56377720-56377739 None:intergenic 25.0%
! AAAACTTAGTAAGACTACAA+TGG + chr7_1:56377920-56377939 Msa1025600:CDS 25.0%
! AAACTTAGTAAGACTACAAT+GGG + chr7_1:56377921-56377940 Msa1025600:CDS 25.0%
!! TCTGTATTGTATGTATGTTT+TGG + chr7_1:56378080-56378099 Msa1025600:CDS 25.0%
!! AATCAGGTCAAAATTTTATC+TGG + chr7_1:56378159-56378178 Msa1025600:intron 25.0%
!! ATCAGGTCAAAATTTTATCT+GGG + chr7_1:56378160-56378179 Msa1025600:intron 25.0%
!!! TTGTTGATGTTTTGAAGATA+GGG + chr7_1:56378433-56378452 Msa1025600:CDS 25.0%
! GAGCAAAAGAACATAATTTA+TGG + chr7_1:56378466-56378485 Msa1025600:CDS 25.0%
! GAAATCATTGAAGAAATCTA+AGG + chr7_1:56378677-56378696 Msa1025600:CDS 25.0%
! ATTCTTGGTAAAATCATTCA+AGG + chr7_1:56377510-56377529 Msa1025600:CDS 25.0%
! GTGATGTAATAATGAATTCT+TGG - chr7_1:56377651-56377670 None:intergenic 25.0%
! ATACTTCATCATTAAATGGA+TGG - chr7_1:56377694-56377713 None:intergenic 25.0%
! GTCTATACTTCATCATTAAA+TGG - chr7_1:56377698-56377717 None:intergenic 25.0%
! TCAGAAACTAAATTATCATG+AGG - chr7_1:56377720-56377739 None:intergenic 25.0%
! AAAACTTAGTAAGACTACAA+TGG + chr7_1:56377920-56377939 Msa1025600:CDS 25.0%
! AAACTTAGTAAGACTACAAT+GGG + chr7_1:56377921-56377940 Msa1025600:CDS 25.0%
!! TCTGTATTGTATGTATGTTT+TGG + chr7_1:56378080-56378099 Msa1025600:CDS 25.0%
!! AATCAGGTCAAAATTTTATC+TGG + chr7_1:56378159-56378178 Msa1025600:intron 25.0%
!! ATCAGGTCAAAATTTTATCT+GGG + chr7_1:56378160-56378179 Msa1025600:intron 25.0%
!!! TTGTTGATGTTTTGAAGATA+GGG + chr7_1:56378433-56378452 Msa1025600:CDS 25.0%
! GAGCAAAAGAACATAATTTA+TGG + chr7_1:56378466-56378485 Msa1025600:CDS 25.0%
! GAAATCATTGAAGAAATCTA+AGG + chr7_1:56378677-56378696 Msa1025600:CDS 25.0%
! AACAACATGAAGTTGGTTAT+GGG - chr7_1:56377247-56377266 None:intergenic 30.0%
! AAACAACATGAAGTTGGTTA+TGG - chr7_1:56377248-56377267 None:intergenic 30.0%
GAAGAAAAACAACATGAAGT+TGG - chr7_1:56377254-56377273 None:intergenic 30.0%
!!! TGTCAGTGTCTATTGATTTT+TGG - chr7_1:56377386-56377405 None:intergenic 30.0%
!! CTGAATAAGTTGAGTTTTGA+TGG - chr7_1:56377424-56377443 None:intergenic 30.0%
GTAAAATCATTCAAGGAGTA+AGG + chr7_1:56377517-56377536 Msa1025600:CDS 30.0%
AATTCTTGGAATACCTAGTT+TGG - chr7_1:56377637-56377656 None:intergenic 30.0%
ACACAGAAATTTACAATTCC+TGG + chr7_1:56377741-56377760 Msa1025600:CDS 30.0%
GAATCAGAGAAAAGAAGTTA+TGG + chr7_1:56377855-56377874 Msa1025600:CDS 30.0%
! ATACAACAGTTTTCATGAAC+TGG + chr7_1:56377884-56377903 Msa1025600:CDS 30.0%
AACTTAGTAAGACTACAATG+GGG + chr7_1:56377922-56377941 Msa1025600:CDS 30.0%
CAACAAGGTTAATGAGAAAA+AGG + chr7_1:56377983-56378002 Msa1025600:CDS 30.0%
TTAATGAGAAAAAGGCCAAT+GGG + chr7_1:56377991-56378010 Msa1025600:CDS 30.0%
AAGGATGAAAGAAAGCAAAA+AGG + chr7_1:56378242-56378261 Msa1025600:CDS 30.0%
AGGATGAAAGAAAGCAAAAA+GGG + chr7_1:56378243-56378262 Msa1025600:CDS 30.0%
! ACTATTGAAAGCATAAATGC+TGG + chr7_1:56378354-56378373 Msa1025600:CDS 30.0%
GCAACTTCTCATTGTAAAAT+TGG - chr7_1:56378413-56378432 None:intergenic 30.0%
!!! CTTGTTGATGTTTTGAAGAT+AGG + chr7_1:56378432-56378451 Msa1025600:CDS 30.0%
TAACATTAATGCAGAGAAAG+TGG + chr7_1:56378491-56378510 Msa1025600:CDS 30.0%
! AACAACATGAAGTTGGTTAT+GGG - chr7_1:56377247-56377266 None:intergenic 30.0%
! AAACAACATGAAGTTGGTTA+TGG - chr7_1:56377248-56377267 None:intergenic 30.0%
GAAGAAAAACAACATGAAGT+TGG - chr7_1:56377254-56377273 None:intergenic 30.0%
!!! TGTCAGTGTCTATTGATTTT+TGG - chr7_1:56377386-56377405 None:intergenic 30.0%
!! CTGAATAAGTTGAGTTTTGA+TGG - chr7_1:56377424-56377443 None:intergenic 30.0%
GTAAAATCATTCAAGGAGTA+AGG + chr7_1:56377517-56377536 Msa1025600:CDS 30.0%
AATTCTTGGAATACCTAGTT+TGG - chr7_1:56377637-56377656 None:intergenic 30.0%
ACACAGAAATTTACAATTCC+TGG + chr7_1:56377741-56377760 Msa1025600:CDS 30.0%
GAATCAGAGAAAAGAAGTTA+TGG + chr7_1:56377855-56377874 Msa1025600:CDS 30.0%
! ATACAACAGTTTTCATGAAC+TGG + chr7_1:56377884-56377903 Msa1025600:CDS 30.0%
AACTTAGTAAGACTACAATG+GGG + chr7_1:56377922-56377941 Msa1025600:CDS 30.0%
CAACAAGGTTAATGAGAAAA+AGG + chr7_1:56377983-56378002 Msa1025600:CDS 30.0%
TTAATGAGAAAAAGGCCAAT+GGG + chr7_1:56377991-56378010 Msa1025600:CDS 30.0%
AAGGATGAAAGAAAGCAAAA+AGG + chr7_1:56378242-56378261 Msa1025600:CDS 30.0%
AGGATGAAAGAAAGCAAAAA+GGG + chr7_1:56378243-56378262 Msa1025600:CDS 30.0%
! ACTATTGAAAGCATAAATGC+TGG + chr7_1:56378354-56378373 Msa1025600:CDS 30.0%
GCAACTTCTCATTGTAAAAT+TGG - chr7_1:56378413-56378432 None:intergenic 30.0%
!!! CTTGTTGATGTTTTGAAGAT+AGG + chr7_1:56378432-56378451 Msa1025600:CDS 30.0%
TAACATTAATGCAGAGAAAG+TGG + chr7_1:56378491-56378510 Msa1025600:CDS 30.0%
TGTCAATCATAGGGTTCATA+TGG - chr7_1:56377293-56377312 None:intergenic 35.0%
!!! TTTTTGGAACCTTGAAGCAT+TGG - chr7_1:56377370-56377389 None:intergenic 35.0%
! ACCAAGAATTTCAAGTGAAG+TGG - chr7_1:56377499-56377518 None:intergenic 35.0%
ATATCAGAGACTATGCAATC+TGG - chr7_1:56377585-56377604 None:intergenic 35.0%
TTCTTTGCATGTAACCAATC+AGG - chr7_1:56377804-56377823 None:intergenic 35.0%
! TTCATGCATTGGTCCAAAAT+AGG - chr7_1:56377838-56377857 None:intergenic 35.0%
! CTTTTCTCTGATTCATGCAT+TGG - chr7_1:56377849-56377868 None:intergenic 35.0%
GTTAATGAGAAAAAGGCCAA+TGG + chr7_1:56377990-56378009 Msa1025600:CDS 35.0%
TAATGAGAAAAAGGCCAATG+GGG + chr7_1:56377992-56378011 Msa1025600:CDS 35.0%
! ATTTCTACAAGTTGAGCATG+AGG - chr7_1:56378122-56378141 None:intergenic 35.0%
AACTTGTAGAAATTGCGCAT+GGG + chr7_1:56378129-56378148 Msa1025600:CDS 35.0%
GATAAAGATGAAGATGGAGA+TGG + chr7_1:56378198-56378217 Msa1025600:intron 35.0%
TCCTGCAAGAATTTGAGAAA+AGG + chr7_1:56378223-56378242 Msa1025600:CDS 35.0%
! TCCTTTTCTCAAATTCTTGC+AGG - chr7_1:56378227-56378246 None:intergenic 35.0%
GCAAAAAGGGCTATATCATA+TGG + chr7_1:56378256-56378275 Msa1025600:CDS 35.0%
AGGGCTATATCATATGGAAT+TGG + chr7_1:56378262-56378281 Msa1025600:CDS 35.0%
GGGCTATATCATATGGAATT+GGG + chr7_1:56378263-56378282 Msa1025600:CDS 35.0%
TAAAATTGGTCAGCAAACAC+CGG - chr7_1:56378399-56378418 None:intergenic 35.0%
! TATGTTCTTTTGCTCCTACA+GGG - chr7_1:56378461-56378480 None:intergenic 35.0%
! TTATGTTCTTTTGCTCCTAC+AGG - chr7_1:56378462-56378481 None:intergenic 35.0%
! TAAGGCTGTGAAGATTTTGA+TGG + chr7_1:56378533-56378552 Msa1025600:CDS 35.0%
!! AAGGCTGTGAAGATTTTGAT+GGG + chr7_1:56378534-56378553 Msa1025600:CDS 35.0%
! TTGAAGAAATCTAAGGCACT+TGG + chr7_1:56378684-56378703 Msa1025600:CDS 35.0%
TGTCAATCATAGGGTTCATA+TGG - chr7_1:56377293-56377312 None:intergenic 35.0%
!!! TTTTTGGAACCTTGAAGCAT+TGG - chr7_1:56377370-56377389 None:intergenic 35.0%
! ACCAAGAATTTCAAGTGAAG+TGG - chr7_1:56377499-56377518 None:intergenic 35.0%
ATATCAGAGACTATGCAATC+TGG - chr7_1:56377585-56377604 None:intergenic 35.0%
TTCTTTGCATGTAACCAATC+AGG - chr7_1:56377804-56377823 None:intergenic 35.0%
! TTCATGCATTGGTCCAAAAT+AGG - chr7_1:56377838-56377857 None:intergenic 35.0%
! CTTTTCTCTGATTCATGCAT+TGG - chr7_1:56377849-56377868 None:intergenic 35.0%
GTTAATGAGAAAAAGGCCAA+TGG + chr7_1:56377990-56378009 Msa1025600:CDS 35.0%
TAATGAGAAAAAGGCCAATG+GGG + chr7_1:56377992-56378011 Msa1025600:CDS 35.0%
! ATTTCTACAAGTTGAGCATG+AGG - chr7_1:56378122-56378141 None:intergenic 35.0%
AACTTGTAGAAATTGCGCAT+GGG + chr7_1:56378129-56378148 Msa1025600:CDS 35.0%
GATAAAGATGAAGATGGAGA+TGG + chr7_1:56378198-56378217 Msa1025600:intron 35.0%
TCCTGCAAGAATTTGAGAAA+AGG + chr7_1:56378223-56378242 Msa1025600:CDS 35.0%
! TCCTTTTCTCAAATTCTTGC+AGG - chr7_1:56378227-56378246 None:intergenic 35.0%
GCAAAAAGGGCTATATCATA+TGG + chr7_1:56378256-56378275 Msa1025600:CDS 35.0%
AGGGCTATATCATATGGAAT+TGG + chr7_1:56378262-56378281 Msa1025600:CDS 35.0%
GGGCTATATCATATGGAATT+GGG + chr7_1:56378263-56378282 Msa1025600:CDS 35.0%
TAAAATTGGTCAGCAAACAC+CGG - chr7_1:56378399-56378418 None:intergenic 35.0%
! TATGTTCTTTTGCTCCTACA+GGG - chr7_1:56378461-56378480 None:intergenic 35.0%
! TTATGTTCTTTTGCTCCTAC+AGG - chr7_1:56378462-56378481 None:intergenic 35.0%
! TAAGGCTGTGAAGATTTTGA+TGG + chr7_1:56378533-56378552 Msa1025600:CDS 35.0%
!! AAGGCTGTGAAGATTTTGAT+GGG + chr7_1:56378534-56378553 Msa1025600:CDS 35.0%
! TTGAAGAAATCTAAGGCACT+TGG + chr7_1:56378684-56378703 Msa1025600:CDS 35.0%
! GTCTTGCTGTGTCAATCATA+GGG - chr7_1:56377302-56377321 None:intergenic 40.0%
! AGTCTTGCTGTGTCAATCAT+AGG - chr7_1:56377303-56377322 None:intergenic 40.0%
GCAAGACTATTTGCAAAGCA+TGG + chr7_1:56377315-56377334 Msa1025600:CDS 40.0%
ATTGGCATGTGTAGTGATGA+TGG - chr7_1:56377352-56377371 None:intergenic 40.0%
ATAGACACTGACATCAGTTC+AGG + chr7_1:56377393-56377412 Msa1025600:CDS 40.0%
! TCGTGTTTTCAATACCGTCA+GGG - chr7_1:56377470-56377489 None:intergenic 40.0%
! TTCGTGTTTTCAATACCGTC+AGG - chr7_1:56377471-56377490 None:intergenic 40.0%
GCCACTTCACTTGAAATTCT+TGG + chr7_1:56377495-56377514 Msa1025600:CDS 40.0%
TCTCTGATATGATGTATCCG+TGG + chr7_1:56377595-56377614 Msa1025600:CDS 40.0%
CATTAAATGGATGGCACAGT+TGG - chr7_1:56377685-56377704 None:intergenic 40.0%
TCAATTGTATGAGGCAAACC+AGG - chr7_1:56377762-56377781 None:intergenic 40.0%
GGAGTCATCTCAATTGTATG+AGG - chr7_1:56377771-56377790 None:intergenic 40.0%
TACAATTGAGATGACTCCTC+TGG + chr7_1:56377773-56377792 Msa1025600:CDS 40.0%
CTACAATGGGGATCAAATCT+TGG + chr7_1:56377934-56377953 Msa1025600:CDS 40.0%
TTGTTGATCCAAGCTGAAAC+TGG - chr7_1:56377969-56377988 None:intergenic 40.0%
AGTTTCAGCTTGGATCAACA+AGG + chr7_1:56377968-56377987 Msa1025600:CDS 40.0%
AATGAGAAAAAGGCCAATGG+GGG + chr7_1:56377993-56378012 Msa1025600:CDS 40.0%
AACTTGCGAAAGAGGAAGAA+TGG + chr7_1:56378027-56378046 Msa1025600:CDS 40.0%
AAGAGGAAGAATGGCTAGAT+TGG + chr7_1:56378036-56378055 Msa1025600:CDS 40.0%
!!! TATGTTTTGGCAGCCATACT+AGG + chr7_1:56378093-56378112 Msa1025600:CDS 40.0%
CAACTTGTAGAAATTGCGCA+TGG + chr7_1:56378128-56378147 Msa1025600:CDS 40.0%
TGTTCCAATATCAACAGCTG+TGG - chr7_1:56378291-56378310 None:intergenic 40.0%
GAGAAGGGAAGAGATAGTTA+AGG + chr7_1:56378515-56378534 Msa1025600:CDS 40.0%
ACCAAGAGAGCAAAGAAATG+AGG + chr7_1:56378562-56378581 Msa1025600:CDS 40.0%
TCCTCATTTCTTTGCTCTCT+TGG - chr7_1:56378566-56378585 None:intergenic 40.0%
AGGATGAGAGCAAAGAAACT+TGG + chr7_1:56378582-56378601 Msa1025600:CDS 40.0%
! GTCTTGCTGTGTCAATCATA+GGG - chr7_1:56377302-56377321 None:intergenic 40.0%
! AGTCTTGCTGTGTCAATCAT+AGG - chr7_1:56377303-56377322 None:intergenic 40.0%
GCAAGACTATTTGCAAAGCA+TGG + chr7_1:56377315-56377334 Msa1025600:CDS 40.0%
ATTGGCATGTGTAGTGATGA+TGG - chr7_1:56377352-56377371 None:intergenic 40.0%
ATAGACACTGACATCAGTTC+AGG + chr7_1:56377393-56377412 Msa1025600:CDS 40.0%
! TCGTGTTTTCAATACCGTCA+GGG - chr7_1:56377470-56377489 None:intergenic 40.0%
! TTCGTGTTTTCAATACCGTC+AGG - chr7_1:56377471-56377490 None:intergenic 40.0%
GCCACTTCACTTGAAATTCT+TGG + chr7_1:56377495-56377514 Msa1025600:CDS 40.0%
TCTCTGATATGATGTATCCG+TGG + chr7_1:56377595-56377614 Msa1025600:CDS 40.0%
CATTAAATGGATGGCACAGT+TGG - chr7_1:56377685-56377704 None:intergenic 40.0%
TCAATTGTATGAGGCAAACC+AGG - chr7_1:56377762-56377781 None:intergenic 40.0%
GGAGTCATCTCAATTGTATG+AGG - chr7_1:56377771-56377790 None:intergenic 40.0%
TACAATTGAGATGACTCCTC+TGG + chr7_1:56377773-56377792 Msa1025600:CDS 40.0%
CTACAATGGGGATCAAATCT+TGG + chr7_1:56377934-56377953 Msa1025600:CDS 40.0%
TTGTTGATCCAAGCTGAAAC+TGG - chr7_1:56377969-56377988 None:intergenic 40.0%
AGTTTCAGCTTGGATCAACA+AGG + chr7_1:56377968-56377987 Msa1025600:CDS 40.0%
AATGAGAAAAAGGCCAATGG+GGG + chr7_1:56377993-56378012 Msa1025600:CDS 40.0%
AACTTGCGAAAGAGGAAGAA+TGG + chr7_1:56378027-56378046 Msa1025600:CDS 40.0%
AAGAGGAAGAATGGCTAGAT+TGG + chr7_1:56378036-56378055 Msa1025600:CDS 40.0%
!!! TATGTTTTGGCAGCCATACT+AGG + chr7_1:56378093-56378112 Msa1025600:CDS 40.0%
CAACTTGTAGAAATTGCGCA+TGG + chr7_1:56378128-56378147 Msa1025600:CDS 40.0%
TGTTCCAATATCAACAGCTG+TGG - chr7_1:56378291-56378310 None:intergenic 40.0%
GAGAAGGGAAGAGATAGTTA+AGG + chr7_1:56378515-56378534 Msa1025600:CDS 40.0%
ACCAAGAGAGCAAAGAAATG+AGG + chr7_1:56378562-56378581 Msa1025600:CDS 40.0%
TCCTCATTTCTTTGCTCTCT+TGG - chr7_1:56378566-56378585 None:intergenic 40.0%
AGGATGAGAGCAAAGAAACT+TGG + chr7_1:56378582-56378601 Msa1025600:CDS 40.0%
TTTCTTCCATTTCCCTCAGC+TGG + chr7_1:56377267-56377286 Msa1025600:CDS 45.0%
CTACACATGCCAATGCTTCA+AGG + chr7_1:56377358-56377377 Msa1025600:CDS 45.0%
TCAAGGAGTAAGGATGCTTC+AGG + chr7_1:56377527-56377546 Msa1025600:CDS 45.0%
TATGATGTATCCGTGGACAG+TGG + chr7_1:56377602-56377621 Msa1025600:CDS 45.0%
AACCAATCAGGAACTTCCAG+AGG - chr7_1:56377792-56377811 None:intergenic 45.0%
CATTGGTCCAAAATAGGCAG+CGG - chr7_1:56377832-56377851 None:intergenic 45.0%
GGGATCAAATCTTGGAGTGT+AGG + chr7_1:56377942-56377961 Msa1025600:CDS 45.0%
CATAGAGGAACTTGCGAAAG+AGG + chr7_1:56378019-56378038 Msa1025600:CDS 45.0%
GAGCATGAGGAAACCTAGTA+TGG - chr7_1:56378109-56378128 None:intergenic 45.0%
ATATTGGAACACCCTGCAAC+CGG + chr7_1:56378300-56378319 Msa1025600:CDS 45.0%
ACAATGAGTCACAATCCCTC+CGG - chr7_1:56378322-56378341 None:intergenic 45.0%
GGATTGTGACTCATTGTGGT+TGG + chr7_1:56378325-56378344 Msa1025600:CDS 45.0%
! CTGGTTTGCCAATGATTACG+TGG + chr7_1:56378373-56378392 Msa1025600:CDS 45.0%
TTTGCCAATGATTACGTGGC+CGG + chr7_1:56378377-56378396 Msa1025600:CDS 45.0%
TTGAAGATAGGGATCCCTGT+AGG + chr7_1:56378444-56378463 Msa1025600:CDS 45.0%
ATGCAGAGAAAGTGGTGAGA+AGG + chr7_1:56378499-56378518 Msa1025600:CDS 45.0%
TGCAGAGAAAGTGGTGAGAA+GGG + chr7_1:56378500-56378519 Msa1025600:CDS 45.0%
ACCTTCCTCTATAGTCCTCT+TGG - chr7_1:56378616-56378635 None:intergenic 45.0%
AAGAGGACTATAGAGGAAGG+TGG + chr7_1:56378615-56378634 Msa1025600:CDS 45.0%
TTTCTTCCATTTCCCTCAGC+TGG + chr7_1:56377267-56377286 Msa1025600:CDS 45.0%
CTACACATGCCAATGCTTCA+AGG + chr7_1:56377358-56377377 Msa1025600:CDS 45.0%
TCAAGGAGTAAGGATGCTTC+AGG + chr7_1:56377527-56377546 Msa1025600:CDS 45.0%
TATGATGTATCCGTGGACAG+TGG + chr7_1:56377602-56377621 Msa1025600:CDS 45.0%
AACCAATCAGGAACTTCCAG+AGG - chr7_1:56377792-56377811 None:intergenic 45.0%
CATTGGTCCAAAATAGGCAG+CGG - chr7_1:56377832-56377851 None:intergenic 45.0%
GGGATCAAATCTTGGAGTGT+AGG + chr7_1:56377942-56377961 Msa1025600:CDS 45.0%
CATAGAGGAACTTGCGAAAG+AGG + chr7_1:56378019-56378038 Msa1025600:CDS 45.0%
GAGCATGAGGAAACCTAGTA+TGG - chr7_1:56378109-56378128 None:intergenic 45.0%
ATATTGGAACACCCTGCAAC+CGG + chr7_1:56378300-56378319 Msa1025600:CDS 45.0%
ACAATGAGTCACAATCCCTC+CGG - chr7_1:56378322-56378341 None:intergenic 45.0%
GGATTGTGACTCATTGTGGT+TGG + chr7_1:56378325-56378344 Msa1025600:CDS 45.0%
! CTGGTTTGCCAATGATTACG+TGG + chr7_1:56378373-56378392 Msa1025600:CDS 45.0%
TTTGCCAATGATTACGTGGC+CGG + chr7_1:56378377-56378396 Msa1025600:CDS 45.0%
TTGAAGATAGGGATCCCTGT+AGG + chr7_1:56378444-56378463 Msa1025600:CDS 45.0%
ATGCAGAGAAAGTGGTGAGA+AGG + chr7_1:56378499-56378518 Msa1025600:CDS 45.0%
TGCAGAGAAAGTGGTGAGAA+GGG + chr7_1:56378500-56378519 Msa1025600:CDS 45.0%
ACCTTCCTCTATAGTCCTCT+TGG - chr7_1:56378616-56378635 None:intergenic 45.0%
AAGAGGACTATAGAGGAAGG+TGG + chr7_1:56378615-56378634 Msa1025600:CDS 45.0%
ATATGGCCAGCTGAGGGAAA+TGG - chr7_1:56377276-56377295 None:intergenic 50.0%
CAGTTCCCTTCAGCTCAAGT+TGG + chr7_1:56377441-56377460 Msa1025600:CDS 50.0%
GGAGACCAACTTGAGCTGAA+GGG - chr7_1:56377449-56377468 None:intergenic 50.0%
GGATGGCACAGTTGGAGAAT+TGG - chr7_1:56377677-56377696 None:intergenic 50.0%
! CTCCTCTGGAAGTTCCTGAT+TGG + chr7_1:56377787-56377806 Msa1025600:CDS 50.0%
! AATCCTGCCGCTGCCTATTT+TGG + chr7_1:56377822-56377841 Msa1025600:CDS 50.0%
GTGTAGGACCAGTTTCAGCT+TGG + chr7_1:56377958-56377977 Msa1025600:CDS 50.0%
TTCCTCTATGTGTCCCCCAT+TGG - chr7_1:56378009-56378028 None:intergenic 50.0%
GCGCATGGGCTTGAAAAATC+AGG + chr7_1:56378143-56378162 Msa1025600:CDS 50.0%
GGCACCACAGCTGTTGATAT+TGG + chr7_1:56378284-56378303 Msa1025600:CDS 50.0%
GGAGGGATTGTGACTCATTG+TGG + chr7_1:56378321-56378340 Msa1025600:CDS 50.0%
AACACCGGCCACGTAATCAT+TGG - chr7_1:56378384-56378403 None:intergenic 50.0%
!! AACTTGGTGATGCTGCCAAG+AGG + chr7_1:56378598-56378617 Msa1025600:CDS 50.0%
TGCTGCCAAGAGGACTATAG+AGG + chr7_1:56378608-56378627 Msa1025600:CDS 50.0%
GCCAAGAGGACTATAGAGGA+AGG + chr7_1:56378612-56378631 Msa1025600:CDS 50.0%
ATATGGCCAGCTGAGGGAAA+TGG - chr7_1:56377276-56377295 None:intergenic 50.0%
CAGTTCCCTTCAGCTCAAGT+TGG + chr7_1:56377441-56377460 Msa1025600:CDS 50.0%
GGAGACCAACTTGAGCTGAA+GGG - chr7_1:56377449-56377468 None:intergenic 50.0%
GGATGGCACAGTTGGAGAAT+TGG - chr7_1:56377677-56377696 None:intergenic 50.0%
! CTCCTCTGGAAGTTCCTGAT+TGG + chr7_1:56377787-56377806 Msa1025600:CDS 50.0%
! AATCCTGCCGCTGCCTATTT+TGG + chr7_1:56377822-56377841 Msa1025600:CDS 50.0%
GTGTAGGACCAGTTTCAGCT+TGG + chr7_1:56377958-56377977 Msa1025600:CDS 50.0%
TTCCTCTATGTGTCCCCCAT+TGG - chr7_1:56378009-56378028 None:intergenic 50.0%
GCGCATGGGCTTGAAAAATC+AGG + chr7_1:56378143-56378162 Msa1025600:CDS 50.0%
GGCACCACAGCTGTTGATAT+TGG + chr7_1:56378284-56378303 Msa1025600:CDS 50.0%
GGAGGGATTGTGACTCATTG+TGG + chr7_1:56378321-56378340 Msa1025600:CDS 50.0%
AACACCGGCCACGTAATCAT+TGG - chr7_1:56378384-56378403 None:intergenic 50.0%
!! AACTTGGTGATGCTGCCAAG+AGG + chr7_1:56378598-56378617 Msa1025600:CDS 50.0%
TGCTGCCAAGAGGACTATAG+AGG + chr7_1:56378608-56378627 Msa1025600:CDS 50.0%
GCCAAGAGGACTATAGAGGA+AGG + chr7_1:56378612-56378631 Msa1025600:CDS 50.0%
GGGTTCATATGGCCAGCTGA+GGG - chr7_1:56377282-56377301 None:intergenic 55.0%
AGGGTTCATATGGCCAGCTG+AGG - chr7_1:56377283-56377302 None:intergenic 55.0%
GGGAGACCAACTTGAGCTGA+AGG - chr7_1:56377450-56377469 None:intergenic 55.0%
!! GCTCAAGTTGGTCTCCCTGA+CGG + chr7_1:56377453-56377472 Msa1025600:CDS 55.0%
GTGGAAGCAGCTGCCAAACT+AGG + chr7_1:56377621-56377640 Msa1025600:CDS 55.0%
TCACAATCCCTCCGGTTGCA+GGG - chr7_1:56378314-56378333 None:intergenic 55.0%
GGGTTCATATGGCCAGCTGA+GGG - chr7_1:56377282-56377301 None:intergenic 55.0%
AGGGTTCATATGGCCAGCTG+AGG - chr7_1:56377283-56377302 None:intergenic 55.0%
GGGAGACCAACTTGAGCTGA+AGG - chr7_1:56377450-56377469 None:intergenic 55.0%
!! GCTCAAGTTGGTCTCCCTGA+CGG + chr7_1:56377453-56377472 Msa1025600:CDS 55.0%
GTGGAAGCAGCTGCCAAACT+AGG + chr7_1:56377621-56377640 Msa1025600:CDS 55.0%
TCACAATCCCTCCGGTTGCA+GGG - chr7_1:56378314-56378333 None:intergenic 55.0%
GCAGCTGCTTCCACTGTCCA+CGG - chr7_1:56377615-56377634 None:intergenic 60.0%
GGTCCAAAATAGGCAGCGGC+AGG - chr7_1:56377828-56377847 None:intergenic 60.0%
GGCCAATGGGGGACACATAG+AGG + chr7_1:56378004-56378023 Msa1025600:CDS 60.0%
TTGGAACACCCTGCAACCGG+AGG + chr7_1:56378303-56378322 Msa1025600:CDS 60.0%
TGGAACACCCTGCAACCGGA+GGG + chr7_1:56378304-56378323 Msa1025600:CDS 60.0%
GTCACAATCCCTCCGGTTGC+AGG - chr7_1:56378315-56378334 None:intergenic 60.0%
GCAGCTGCTTCCACTGTCCA+CGG - chr7_1:56377615-56377634 None:intergenic 60.0%
GGTCCAAAATAGGCAGCGGC+AGG - chr7_1:56377828-56377847 None:intergenic 60.0%
GGCCAATGGGGGACACATAG+AGG + chr7_1:56378004-56378023 Msa1025600:CDS 60.0%
TTGGAACACCCTGCAACCGG+AGG + chr7_1:56378303-56378322 Msa1025600:CDS 60.0%
TGGAACACCCTGCAACCGGA+GGG + chr7_1:56378304-56378323 Msa1025600:CDS 60.0%
GTCACAATCCCTCCGGTTGC+AGG - chr7_1:56378315-56378334 None:intergenic 60.0%
Chromosome Type Strat End Strand Name
chr7_1 gene 56377228 56378722 56377228 ID=Msa1025600;Name=Msa1025600
chr7_1 mRNA 56377228 56378722 56377228 ID=Msa1025600-mRNA-1;Parent=Msa1025600;Name=Msa1025600-mRNA-1;_AED=0.23;_eAED=0.23;_QI=0|0|0|1|1|1|2|0|484
chr7_1 exon 56377228 56378164 56377228 ID=Msa1025600-mRNA-1:exon:11283;Parent=Msa1025600-mRNA-1
chr7_1 exon 56378205 56378722 56378205 ID=Msa1025600-mRNA-1:exon:11284;Parent=Msa1025600-mRNA-1
chr7_1 CDS 56377228 56378164 56377228 ID=Msa1025600-mRNA-1:cds;Parent=Msa1025600-mRNA-1
chr7_1 CDS 56378205 56378722 56378205 ID=Msa1025600-mRNA-1:cds;Parent=Msa1025600-mRNA-1
Gene Sequence

>Msa1025600

ATGGAGTCTCAACAATCCCATAACCAACTTCATGTTGTTTTTCTTCCATTTCCCTCAGCTGGCCATATGAACCCTATGATTGACACAGCAAGACTATTTGCAAAGCATGGTGTTAATGTTACCATCATCACTACACATGCCAATGCTTCAAGGTTCCAAAAATCAATAGACACTGACATCAGTTCAGGATACTCCATCAAAACTCAACTTATTCAGTTCCCTTCAGCTCAAGTTGGTCTCCCTGACGGTATTGAAAACACGAACGATGCCACTTCACTTGAAATTCTTGGTAAAATCATTCAAGGAGTAAGGATGCTTCAGGAATCTATTGAAGTTCTGTTAAAAGAAGTTCAACCAGATTGCATAGTCTCTGATATGATGTATCCGTGGACAGTGGAAGCAGCTGCCAAACTAGGTATTCCAAGAATTCATTATTACATCACAAGCCAATTCTCCAACTGTGCCATCCATTTAATGATGAAGTATAGACCTCATGATAATTTAGTTTCTGATACACAGAAATTTACAATTCCTGGTTTGCCTCATACAATTGAGATGACTCCTCTGGAAGTTCCTGATTGGTTACATGCAAAGAATCCTGCCGCTGCCTATTTTGGACCAATGCATGAATCAGAGAAAAGAAGTTATGGAACACTATACAACAGTTTTCATGAACTGGAAAGTGATTATGAAAAACTTAGTAAGACTACAATGGGGATCAAATCTTGGAGTGTAGGACCAGTTTCAGCTTGGATCAACAAGGTTAATGAGAAAAAGGCCAATGGGGGACACATAGAGGAACTTGCGAAAGAGGAAGAATGGCTAGATTGGCTTAACTCAAAGCAAAATGAGTCTGTATTGTATGTATGTTTTGGCAGCCATACTAGGTTTCCTCATGCTCAACTTGTAGAAATTGCGCATGGGCTTGAAAAATCAGATGAAGATGGAGATGGTTTCCTGCAAGAATTTGAGAAAAGGATGAAAGAAAGCAAAAAGGGCTATATCATATGGAATTGGGCACCACAGCTGTTGATATTGGAACACCCTGCAACCGGAGGGATTGTGACTCATTGTGGTTGGAACTCAACTATTGAAAGCATAAATGCTGGTTTGCCAATGATTACGTGGCCGGTGTTTGCTGACCAATTTTACAATGAGAAGTTGCTTGTTGATGTTTTGAAGATAGGGATCCCTGTAGGAGCAAAAGAACATAATTTATGGGCTAACATTAATGCAGAGAAAGTGGTGAGAAGGGAAGAGATAGTTAAGGCTGTGAAGATTTTGATGGGAAGTGACCAAGAGAGCAAAGAAATGAGGATGAGAGCAAAGAAACTTGGTGATGCTGCCAAGAGGACTATAGAGGAAGGTGGTGATTCTTACAACAACTTGATTCAGTTGATTGATGAGCTGAAATCATTGAAGAAATCTAAGGCACTTGGTGAGAAATCAGATTAG

Protein sequence

>Msa1025600

MESQQSHNQLHVVFLPFPSAGHMNPMIDTARLFAKHGVNVTIITTHANASRFQKSIDTDISSGYSIKTQLIQFPSAQVGLPDGIENTNDATSLEILGKIIQGVRMLQESIEVLLKEVQPDCIVSDMMYPWTVEAAAKLGIPRIHYYITSQFSNCAIHLMMKYRPHDNLVSDTQKFTIPGLPHTIEMTPLEVPDWLHAKNPAAAYFGPMHESEKRSYGTLYNSFHELESDYEKLSKTTMGIKSWSVGPVSAWINKVNEKKANGGHIEELAKEEEWLDWLNSKQNESVLYVCFGSHTRFPHAQLVEIAHGLEKSDEDGDGFLQEFEKRMKESKKGYIIWNWAPQLLILEHPATGGIVTHCGWNSTIESINAGLPMITWPVFADQFYNEKLLVDVLKIGIPVGAKEHNLWANINAEKVVRREEIVKAVKILMGSDQESKEMRMRAKKLGDAAKRTIEEGGDSYNNLIQLIDELKSLKKSKALGEKSD*