AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa1064440


Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa1064440 MtrunA17_Chr7g0243931 78.313 498 107 1 1 497 7 504 0.0 814
Msa1064440 MtrunA17_Chr7g0243861 79.678 497 100 1 2 497 5 501 0.0 811
Msa1064440 MtrunA17_Chr7g0243681 77.823 496 104 2 1 495 1 491 0.0 811
Msa1064440 MtrunA17_Chr7g0243951 78.514 498 105 2 1 497 1 497 0.0 810
Msa1064440 MtrunA17_Chr7g0243631 76.600 500 114 2 1 497 1 500 0.0 798
Msa1064440 MtrunA17_Chr4g0060511 74.850 501 122 2 1 497 1 501 0.0 777
Msa1064440 MtrunA17_Chr7g0243771 74.074 486 121 2 8 492 3 484 0.0 762
Msa1064440 MtrunA17_Chr7g0243801 73.428 493 122 3 1 492 1 485 0.0 759
Msa1064440 MtrunA17_Chr7g0235051 73.642 497 101 1 1 497 1 467 0.0 726
Msa1064440 MtrunA17_Chr7g0243761 73.038 497 105 1 1 497 1 468 0.0 726
Msa1064440 MtrunA17_Chr7g0243851 71.084 498 101 2 1 497 1 456 0.0 723
Msa1064440 MtrunA17_Chr7g0243781 65.996 497 157 3 1 495 1 487 0.0 673
Msa1064440 MtrunA17_Chr7g0243871 65.918 490 156 3 1 490 1 479 0.0 670
Msa1064440 MtrunA17_Chr5g0401851 53.579 489 224 2 5 491 4 491 0.0 541
Msa1064440 MtrunA17_Chr8g0355221 54.209 487 220 3 5 490 9 493 0.0 530
Msa1064440 MtrunA17_Chr7g0243811 63.000 400 135 2 23 422 1 387 0.0 514
Msa1064440 MtrunA17_Chr1g0165701 52.546 491 229 4 5 495 9 495 7.04e-179 511
Msa1064440 MtrunA17_Chr5g0416741 52.905 482 221 5 8 487 10 487 8.37e-174 498
Msa1064440 MtrunA17_Chr6g0463891 51.129 487 234 4 9 493 10 494 1.65e-170 490
Msa1064440 MtrunA17_Chr7g0243611 72.903 310 70 1 126 435 1 296 3.97e-168 476
Msa1064440 MtrunA17_Chr7g0243711 87.109 256 33 0 242 497 75 330 1.59e-162 463
Msa1064440 MtrunA17_Chr7g0243711 86.076 79 11 0 1 79 1 79 3.24e-39 145
Msa1064440 MtrunA17_Chr5g0416821 48.485 495 234 5 5 493 4 483 4.60e-159 460
Msa1064440 MtrunA17_Chr4g0044501 45.825 491 248 9 1 486 1 478 8.43e-143 419
Msa1064440 MtrunA17_Chr8g0366391 44.400 500 262 7 1 495 1 489 1.08e-138 408
Msa1064440 MtrunA17_Chr4g0044511 42.324 482 264 8 7 485 36 506 8.19e-133 394
Msa1064440 MtrunA17_Chr4g0044521 43.659 481 252 7 8 486 6 469 1.12e-125 374
Msa1064440 MtrunA17_Chr4g0066261 40.873 504 272 10 1 492 1 490 6.52e-122 365
Msa1064440 MtrunA17_Chr4g0066151 42.566 491 251 8 10 490 17 486 1.15e-121 365
Msa1064440 MtrunA17_Chr4g0066221 40.631 507 268 10 1 492 1 489 3.13e-120 361
Msa1064440 MtrunA17_Chr4g0066201 41.785 493 249 11 10 491 17 482 3.47e-118 356
Msa1064440 MtrunA17_Chr4g0014061 39.337 483 284 3 10 492 8 481 4.41e-118 355
Msa1064440 MtrunA17_Chr7g0275681 40.456 482 265 9 11 483 12 480 3.64e-117 353
Msa1064440 MtrunA17_Chr4g0066171 40.808 495 252 11 10 492 20 485 2.91e-116 351
Msa1064440 MtrunA17_Chr4g0066281 41.736 484 254 9 14 492 15 475 1.27e-115 349
Msa1064440 MtrunA17_Chr4g0066131 41.093 494 258 9 10 492 12 483 5.44e-114 345
Msa1064440 MtrunA17_Chr7g0243921 75.000 212 48 1 2 213 31 237 1.06e-113 335
Msa1064440 MtrunA17_Chr8g0350881 41.020 490 271 7 10 492 11 489 1.48e-113 344
Msa1064440 MtrunA17_Chr8g0374901 40.733 491 269 8 9 492 12 487 4.93e-113 343
Msa1064440 MtrunA17_Chr4g0011051 38.193 487 291 7 9 487 7 491 7.01e-112 340
Msa1064440 MtrunA17_Chr8g0374971 39.796 490 277 5 10 492 11 489 1.65e-111 339
Msa1064440 MtrunA17_Chr7g0265041 39.919 496 277 12 1 483 1 488 6.31e-111 338
Msa1064440 MtrunA17_Chr5g0419771 39.279 499 273 9 6 487 31 516 8.34e-111 338
Msa1064440 MtrunA17_Chr5g0419761 40.612 490 276 10 10 488 8 493 5.57e-110 335
Msa1064440 MtrunA17_Chr7g0265141 40.080 499 267 13 1 482 1 484 3.95e-109 333
Msa1064440 MtrunA17_Chr7g0218311 40.600 500 258 11 10 492 15 492 6.11e-109 332
Msa1064440 MtrunA17_Chr2g0294931 40.509 511 264 11 1 492 1 490 1.37e-108 332
Msa1064440 MtrunA17_Chr7g0265151 38.277 499 276 13 1 483 1 483 1.78e-107 328
Msa1064440 MtrunA17_Chr1g0179901 36.811 508 289 11 1 490 7 500 2.58e-107 328
Msa1064440 MtrunA17_Chr6g0463851 39.645 507 259 12 1 484 1 483 4.95e-107 327
Msa1064440 MtrunA17_Chr6g0463861 39.087 504 263 14 1 487 1 477 5.23e-107 327
Msa1064440 MtrunA17_Chr4g0044481 43.943 421 198 8 11 428 27 412 3.71e-106 323
Msa1064440 MtrunA17_Chr8g0374931 39.370 508 270 10 1 490 1 488 3.77e-106 325
Msa1064440 MtrunA17_Chr8g0374941 41.309 489 267 8 9 490 949 1424 9.00e-106 344
Msa1064440 MtrunA17_Chr8g0374941 40.377 478 263 9 1 469 1 465 1.13e-98 324
Msa1064440 MtrunA17_Chr8g0374941 40.717 474 259 7 1 465 466 926 3.42e-97 320
Msa1064440 MtrunA17_Chr7g0265101 36.694 496 293 8 9 492 7 493 9.97e-106 324
Msa1064440 MtrunA17_Chr7g0265051 37.600 500 281 12 9 492 7 491 4.83e-105 323
Msa1064440 MtrunA17_Chr7g0243911 73.632 201 53 0 268 468 15 215 1.04e-104 311
Msa1064440 MtrunA17_Chr5g0428081 38.627 510 269 11 1 490 1 486 2.52e-104 320
Msa1064440 MtrunA17_Chr5g0410941 38.462 507 272 10 1 490 13 496 1.87e-102 316
Msa1064440 MtrunA17_Chr7g0265111 37.030 505 294 10 3 493 31 525 3.30e-102 317
Msa1064440 MtrunA17_Chr2g0294921 38.986 513 265 11 1 490 150 637 2.92e-101 317
Msa1064440 MtrunA17_Chr7g0231631 52.190 274 111 6 216 487 8 263 4.36e-81 253
Msa1064440 MtrunA17_Chr2g0294941 39.892 371 189 10 115 468 11 364 3.68e-73 236
Msa1064440 MtrunA17_Chr5g0440421 28.261 506 327 11 3 486 2 493 4.55e-65 218
Msa1064440 MtrunA17_Chr8g0361411 31.452 496 279 13 9 487 6 457 4.26e-61 207
Msa1064440 MtrunA17_Chr6g0454341 29.741 501 291 16 11 483 10 477 8.09e-59 201
Msa1064440 MtrunA17_Chr3g0078841 30.375 507 280 17 11 483 10 477 1.53e-58 201
Msa1064440 MtrunA17_Chr6g0464881 28.226 496 311 15 1 488 1 459 3.03e-58 199
Msa1064440 MtrunA17_Chr6g0464861 29.741 501 286 20 1 483 1 453 5.28e-58 199
Msa1064440 MtrunA17_Chr6g0464841 29.719 498 291 19 1 483 1 454 1.56e-57 197
Msa1064440 MtrunA17_Chr7g0243721 69.286 140 43 0 186 325 1 140 2.33e-57 187
Msa1064440 MtrunA17_Chr1g0207971 27.976 504 296 19 6 489 3 459 2.61e-57 197
Msa1064440 MtrunA17_Chr6g0454261 29.000 500 313 13 11 491 10 486 7.96e-57 196
Msa1064440 MtrunA17_Chr2g0329111 28.247 485 289 15 12 469 7 459 2.95e-56 195
Msa1064440 MtrunA17_Chr6g0464871 27.935 494 305 15 1 483 13 466 3.65e-56 194
Msa1064440 MtrunA17_Chr7g0250001 29.006 493 285 20 8 483 3 447 1.45e-55 192
Msa1064440 MtrunA17_Chr2g0278711 28.400 500 305 14 11 487 11 480 2.29e-55 192
Msa1064440 MtrunA17_Chr2g0307961 31.211 487 290 14 11 483 13 468 4.19e-55 191
Msa1064440 MtrunA17_Chr6g0454321 29.234 496 290 17 11 478 10 472 4.91e-55 195
Msa1064440 MtrunA17_Chr6g0464921 28.773 497 298 15 1 483 1 455 4.93e-55 191
Msa1064440 MtrunA17_Chr8g0336331 29.283 502 291 14 11 483 10 476 1.08e-54 190
Msa1064440 MtrunA17_Chr6g0454361 29.724 508 284 16 11 483 11 480 1.74e-54 190
Msa1064440 MtrunA17_Chr7g0217881 29.652 489 291 18 11 483 10 461 2.96e-54 189
Msa1064440 MtrunA17_Chr6g0454191 28.711 512 301 15 3 483 2 480 3.94e-54 189
Msa1064440 MtrunA17_Chr7g0249931 28.629 496 289 19 6 483 35 483 7.03e-54 188
Msa1064440 MtrunA17_Chr7g0231651 48.469 196 96 2 5 195 4 199 8.68e-54 180
Msa1064440 MtrunA17_Chr3g0098111 27.711 498 312 14 6 485 4 471 9.20e-54 188
Msa1064440 MtrunA17_Chr8g0377921 28.163 490 299 13 12 481 5 461 1.05e-53 187
Msa1064440 MtrunA17_Chr6g0454331 28.656 506 304 15 6 483 2 478 1.74e-53 187
Msa1064440 MtrunA17_Chr6g0454291 29.528 508 295 17 6 483 2 476 1.96e-53 187
Msa1064440 MtrunA17_Chr6g0454141 28.287 502 299 17 11 483 10 479 3.05e-53 186
Msa1064440 MtrunA17_Chr5g0448521 28.226 496 300 14 9 481 3 465 6.54e-53 185
Msa1064440 MtrunA17_Chr5g0426431 30.000 500 299 15 6 483 7 477 7.33e-53 186
Msa1064440 MtrunA17_Chr6g0454301 28.429 503 295 14 11 483 263 730 8.01e-53 190
Msa1064440 MtrunA17_Chr6g0454301 34.583 240 140 4 243 482 6 228 1.56e-33 134
Msa1064440 MtrunA17_Chr6g0454151 28.884 502 294 17 11 483 10 477 8.12e-53 185
Msa1064440 MtrunA17_Chr1g0161351 27.984 511 307 18 1 487 28 501 1.27e-52 185
Msa1064440 MtrunA17_Chr6g0454401 27.984 511 306 16 3 483 2 480 2.30e-52 184
Msa1064440 MtrunA17_Chr6g0462551 32.245 490 280 17 12 481 5 462 2.80e-52 184
Msa1064440 MtrunA17_Chr1g0207981 28.889 495 313 14 2 483 4 472 4.36e-52 183
Msa1064440 MtrunA17_Chr8g0380531 30.461 499 286 20 4 484 3 458 4.36e-52 183
Msa1064440 MtrunA17_Chr6g0453951 28.743 501 298 17 11 483 57 526 1.13e-51 183
Msa1064440 MtrunA17_Chr6g0454181 28.063 506 311 16 3 483 2 479 1.92e-51 182
Msa1064440 MtrunA17_Chr5g0414331 28.257 499 294 19 1 483 3 453 2.16e-51 181
Msa1064440 MtrunA17_Chr8g0357361 47.291 203 100 4 214 416 60 255 4.22e-51 175
Msa1064440 MtrunA17_Chr4g0053501 28.711 512 314 15 1 496 1 477 7.93e-51 181
Msa1064440 MtrunA17_Chr6g0454201 29.249 506 289 16 11 483 11 480 2.71e-50 179
Msa1064440 MtrunA17_Chr7g0249981 27.419 496 303 17 1 483 15 466 2.89e-50 179
Msa1064440 MtrunA17_Chr3g0121991 27.510 498 315 16 11 488 79 550 3.31e-50 180
Msa1064440 MtrunA17_Chr4g0050341 30.279 502 293 17 11 484 19 491 3.46e-50 179
Msa1064440 MtrunA17_Chr3g0112771 29.389 507 294 17 1 491 1 459 5.32e-50 177
Msa1064440 MtrunA17_Chr8g0359821 28.337 487 316 12 11 483 10 477 9.01e-50 177
Msa1064440 MtrunA17_Chr1g0173121 29.899 495 267 18 6 472 9 451 1.05e-49 177
Msa1064440 MtrunA17_Chr3g0092641 28.600 500 306 15 6 483 7 477 2.38e-49 176
Msa1064440 MtrunA17_Chr5g0414321 27.976 504 299 19 1 488 1 456 2.64e-49 176
Msa1064440 MtrunA17_Chr3g0118711 27.647 510 312 16 1 483 1 480 3.85e-49 176
Msa1064440 MtrunA17_Chr6g0454121 28.094 509 290 16 11 483 10 478 5.59e-49 175
Msa1064440 MtrunA17_Chr1g0159551 29.424 486 278 13 6 472 9 448 6.93e-49 174
Msa1064440 MtrunA17_Chr3g0118691 29.283 502 292 19 11 483 15 482 7.01e-49 175
Msa1064440 MtrunA17_Chr1g0207861 27.545 501 309 18 6 485 3 470 7.12e-49 175
Msa1064440 MtrunA17_Chr5g0420801 28.916 498 299 19 6 486 2 461 7.89e-49 174
Msa1064440 MtrunA17_Chr8g0339451 32.075 424 214 16 93 479 73 459 9.01e-49 174
Msa1064440 MtrunA17_Chr8g0347281 29.424 486 289 16 12 479 19 468 9.46e-49 174
Msa1064440 MtrunA17_Chr3g0118671 28.112 498 307 14 9 483 4 473 1.58e-48 174
Msa1064440 MtrunA17_Chr7g0218821 28.898 481 295 14 11 481 5 448 4.11e-48 172
Msa1064440 MtrunA17_Chr7g0232411 37.456 283 143 8 217 486 207 468 5.79e-48 172
Msa1064440 MtrunA17_Chr7g0275511 30.584 497 275 19 12 479 16 471 9.47e-48 172
Msa1064440 MtrunA17_Chr6g0453961 27.756 508 295 16 11 483 19 489 1.14e-47 172
Msa1064440 MtrunA17_Chr6g0454131 26.946 501 322 12 3 483 2 478 2.56e-47 171
Msa1064440 MtrunA17_Chr8g0347271 29.835 486 287 17 12 479 20 469 3.44e-47 170
Msa1064440 MtrunA17_Chr3g0118701 27.811 507 293 18 11 483 15 482 4.20e-47 170
Msa1064440 MtrunA17_Chr6g0454211 28.008 507 310 16 3 483 289 766 4.56e-47 174
Msa1064440 MtrunA17_Chr6g0454211 26.007 273 150 8 129 387 2 236 2.04e-19 91.7
Msa1064440 MtrunA17_Chr8g0339601 33.428 353 170 13 155 479 11 326 5.54e-47 166
Msa1064440 MtrunA17_Chr7g0232391 37.993 279 139 8 217 482 207 464 5.82e-47 169
Msa1064440 MtrunA17_Chr3g0122001 27.856 499 302 17 11 483 486 952 7.53e-47 174
Msa1064440 MtrunA17_Chr3g0122001 26.547 501 319 15 11 489 6 479 4.32e-45 169
Msa1064440 MtrunA17_Chr4g0053321 27.668 506 307 15 9 492 24 492 8.26e-47 169
Msa1064440 MtrunA17_Chr8g0369341 29.283 502 302 19 6 486 2 471 9.90e-47 169
Msa1064440 MtrunA17_Chr8g0382021 28.163 490 284 19 16 480 39 485 1.04e-46 169
Msa1064440 MtrunA17_Chr1g0207951 27.992 493 293 19 10 484 123 571 1.24e-46 174
Msa1064440 MtrunA17_Chr1g0207951 28.041 485 307 17 10 483 655 1108 1.06e-45 171
Msa1064440 MtrunA17_Chr7g0218841 28.690 481 283 15 11 480 6 437 1.34e-46 167
Msa1064440 MtrunA17_Chr3g0118771 27.968 497 305 14 11 483 21 488 1.40e-46 169
Msa1064440 MtrunA17_Chr6g0454351 29.249 506 272 23 11 483 12 464 3.70e-46 167
Msa1064440 MtrunA17_Chr7g0218831 28.333 480 285 15 11 480 6 436 5.46e-46 166
Msa1064440 MtrunA17_Chr5g0423981 27.530 494 278 16 11 483 10 444 7.01e-46 166
Msa1064440 MtrunA17_Chr5g0442541 26.369 493 307 15 11 481 5 463 7.32e-46 166
Msa1064440 MtrunA17_Chr8g0365811 25.800 500 331 12 1 485 485 959 1.00e-45 171
Msa1064440 MtrunA17_Chr8g0365811 27.273 462 273 17 6 438 4 431 2.77e-41 158
Msa1064440 MtrunA17_Chr3g0112761 27.551 490 296 12 11 486 8 452 1.24e-45 166
Msa1064440 MtrunA17_Chr6g0459311 27.846 492 293 15 12 479 14 467 1.34e-45 166
Msa1064440 MtrunA17_Chr7g0218791 28.367 490 285 16 11 482 5 446 1.48e-45 165
Msa1064440 MtrunA17_Chr5g0442521 28.834 489 308 15 12 481 6 473 1.90e-45 165
Msa1064440 MtrunA17_Chr8g0377941 27.879 495 305 17 6 483 2 461 2.32e-45 165
Msa1064440 MtrunA17_Chr8g0335161 27.419 496 294 17 11 479 6 462 2.56e-45 165
Msa1064440 MtrunA17_Chr8g0370941 27.992 518 277 19 11 476 8 481 5.93e-45 165
Msa1064440 MtrunA17_Chr8g0361371 26.772 508 303 15 1 480 1 467 8.39e-45 164
Msa1064440 MtrunA17_Chr6g0452771 27.525 505 299 16 11 483 10 479 8.77e-45 164
Msa1064440 MtrunA17_Chr8g0335141 27.000 500 302 17 12 486 10 471 1.33e-44 163
Msa1064440 MtrunA17_Chr1g0207931 26.113 494 270 14 5 484 86 498 1.87e-44 163
Msa1064440 MtrunA17_Chr7g0218811 27.917 480 290 14 11 481 15 447 2.12e-44 162
Msa1064440 MtrunA17_Chr8g0339461 35.762 302 149 11 192 472 183 460 3.55e-44 162
Msa1064440 MtrunA17_Chr1g0207831 26.305 498 308 20 8 484 5 464 4.11e-44 162
Msa1064440 MtrunA17_Chr5g0412101 27.183 504 316 16 1 485 1 472 5.29e-44 161
Msa1064440 MtrunA17_Chr6g0449931 29.000 500 296 18 11 486 6 470 8.40e-44 161
Msa1064440 MtrunA17_Chr3g0079731 26.733 505 300 17 12 480 7 477 8.43e-44 161
Msa1064440 MtrunA17_Chr6g0486251 27.419 496 298 16 8 479 3 460 1.36e-43 160
Msa1064440 MtrunA17_Chr6g0486201 27.419 496 298 16 8 479 3 460 1.36e-43 160
Msa1064440 MtrunA17_Chr5g0431361 26.626 492 312 13 3 485 4 455 1.39e-43 160
Msa1064440 MtrunA17_Chr6g0462531 29.839 496 283 21 12 479 5 463 1.64e-43 160
Msa1064440 MtrunA17_Chr4g0066141 47.399 173 90 1 321 492 188 360 2.46e-43 157
Msa1064440 MtrunA17_Chr4g0066141 36.683 199 106 5 39 235 8 188 1.45e-26 110
Msa1064440 MtrunA17_Chr5g0442601 28.629 496 301 19 12 481 405 873 2.77e-43 164
Msa1064440 MtrunA17_Chr5g0442601 29.316 307 163 12 121 410 64 333 9.12e-26 111
Msa1064440 MtrunA17_Chr3g0118661 27.400 500 301 16 11 482 13 478 5.96e-43 159
Msa1064440 MtrunA17_Chr8g0339631 30.310 419 241 15 93 487 81 472 1.05e-42 158
Msa1064440 MtrunA17_Chr8g0336651 37.288 295 142 8 204 479 969 1239 1.23e-42 162
Msa1064440 MtrunA17_Chr8g0336651 36.996 273 129 6 217 487 547 778 1.27e-41 159
Msa1064440 MtrunA17_Chr8g0336651 34.420 276 146 8 217 479 207 460 5.55e-36 142
Msa1064440 MtrunA17_Chr6g0462521 30.143 491 274 20 12 479 5 449 1.46e-42 157
Msa1064440 MtrunA17_Chr7g0232341 35.315 286 150 8 217 488 207 471 1.72e-42 157
Msa1064440 MtrunA17_Chr5g0442561 26.220 492 316 16 11 481 5 470 2.06e-42 157
Msa1064440 MtrunA17_Chr8g0336691 36.333 300 158 8 201 487 198 477 2.36e-42 161
Msa1064440 MtrunA17_Chr8g0336691 37.681 276 139 8 217 479 1120 1375 1.92e-41 159
Msa1064440 MtrunA17_Chr8g0336691 35.862 290 145 8 201 487 665 916 3.56e-37 146
Msa1064440 MtrunA17_Chr5g0412131 26.939 490 313 14 11 485 12 471 2.46e-42 157
Msa1064440 MtrunA17_Chr6g0462571 28.803 493 290 17 12 481 5 459 2.68e-42 157
Msa1064440 MtrunA17_Chr8g0373301 31.026 390 207 15 122 485 115 468 3.13e-42 156
Msa1064440 MtrunA17_Chr5g0412111 26.380 489 316 15 11 485 5 463 4.17e-42 156
Msa1064440 MtrunA17_Chr5g0442581 28.056 499 300 20 12 481 6 474 4.76e-42 157
Msa1064440 MtrunA17_Chr6g0454271 33.893 298 174 8 190 483 8 286 6.64e-42 151
Msa1064440 MtrunA17_Chr5g0442491 27.907 516 277 21 12 481 6 472 7.20e-42 155
Msa1064440 MtrunA17_Chr7g0243731 81.250 80 15 0 340 419 1 80 9.66e-42 144
Msa1064440 MtrunA17_Chr6g0454251 28.218 404 249 14 11 388 7 395 1.75e-41 152
Msa1064440 MtrunA17_Chr5g0431441 26.708 483 295 16 11 476 18 458 2.75e-41 154
Msa1064440 MtrunA17_Chr8g0334831 26.482 506 298 16 12 480 7 475 2.90e-41 154
Msa1064440 MtrunA17_Chr5g0409591 25.676 518 294 15 12 478 5 482 3.31e-41 154
Msa1064440 MtrunA17_Chr7g0232331 35.563 284 148 9 217 486 207 469 6.77e-41 153
Msa1064440 MtrunA17_Chr5g0429711 27.386 482 308 17 12 483 12 461 9.48e-41 152
Msa1064440 MtrunA17_Chr5g0393591 25.984 508 276 17 11 496 17 446 4.52e-40 150
Msa1064440 MtrunA17_Chr8g0339441 40.455 220 104 6 275 479 218 425 5.11e-40 149
Msa1064440 MtrunA17_Chr5g0431421 26.176 489 305 15 8 485 7 450 9.91e-40 149
Msa1064440 MtrunA17_Chr5g0403641 26.707 498 282 17 9 479 57 498 1.20e-39 150
Msa1064440 MtrunA17_Chr7g0232401 31.218 394 208 17 108 485 123 469 2.28e-39 149
Msa1064440 MtrunA17_Chr5g0431401 25.873 487 309 14 8 485 7 450 6.14e-39 147
Msa1064440 MtrunA17_Chr7g0232311 35.018 277 144 6 217 480 207 460 7.20e-39 147
Msa1064440 MtrunA17_Chr5g0442511 32.432 296 170 9 203 484 215 494 7.85e-39 147
Msa1064440 MtrunA17_Chr8g0334851 33.333 339 171 13 173 488 168 474 1.32e-38 146
Msa1064440 MtrunA17_Chr1g0153451 35.507 276 142 7 217 479 207 459 1.34e-38 146
Msa1064440 MtrunA17_Chr2g0278741 26.793 474 296 15 1 459 87 524 1.41e-38 147
Msa1064440 MtrunA17_Chr2g0302961 25.800 500 311 17 8 483 2 465 4.85e-38 145
Msa1064440 MtrunA17_Chr2g0278721 27.637 474 286 17 4 459 8 442 6.25e-38 148
Msa1064440 MtrunA17_Chr2g0278721 25.478 471 297 18 10 459 516 953 4.07e-28 119
Msa1064440 MtrunA17_Chr8g0334861 35.252 278 145 7 217 480 204 460 7.49e-38 144
Msa1064440 MtrunA17_Chr6g0462541 40.367 218 107 5 271 481 260 461 8.55e-38 144
Msa1064440 MtrunA17_Chr1g0153461 37.391 230 112 6 273 486 2 215 1.43e-37 137
Msa1064440 MtrunA17_Chr8g0336741 27.163 497 296 16 9 479 11 467 1.51e-37 144
Msa1064440 MtrunA17_Chr4g0032331 26.316 513 291 22 1 485 1 454 3.33e-37 142
Msa1064440 MtrunA17_Chr3g0106231 25.316 474 299 14 11 476 18 444 3.64e-37 142
Msa1064440 MtrunA17_Chr8g0336731 34.657 277 146 8 217 480 233 487 3.78e-37 143
Msa1064440 MtrunA17_Chr6g0454221 35.685 241 137 5 243 482 6 229 4.56e-37 138
Msa1064440 MtrunA17_Chr5g0401721 26.176 489 323 14 9 483 6 470 9.29e-37 141
Msa1064440 MtrunA17_Chr7g0241781 27.233 459 266 16 9 459 7 405 1.21e-36 140
Msa1064440 MtrunA17_Chr5g0429681 25.519 482 318 15 12 481 45 497 1.60e-36 141
Msa1064440 MtrunA17_Chr4g0072771 27.490 502 282 17 9 485 23 467 1.94e-36 140
Msa1064440 MtrunA17_Chr1g0196851 26.596 470 273 15 8 452 46 468 2.58e-36 140
Msa1064440 MtrunA17_Chr5g0431371 25.367 477 318 12 11 485 10 450 3.86e-36 139
Msa1064440 MtrunA17_Chr3g0118751 25.403 496 290 14 11 483 6 444 5.45e-36 139
Msa1064440 MtrunA17_Chr7g0241801 26.978 493 266 16 9 495 7 411 1.69e-35 137
Msa1064440 MtrunA17_Chr5g0432731 29.193 322 194 8 171 486 6 299 2.07e-35 134
Msa1064440 MtrunA17_Chr7g0249961 34.703 219 125 5 265 483 59 259 7.35e-35 131
Msa1064440 MtrunA17_Chr4g0069611 25.714 490 315 15 10 491 14 462 7.64e-35 135
Msa1064440 MtrunA17_Chr2g0302991 25.859 495 314 18 8 483 2 462 1.60e-34 135
Msa1064440 MtrunA17_Chr8g0336251 25.597 461 311 12 6 457 2 439 4.23e-34 134
Msa1064440 MtrunA17_Chr5g0426401 30.241 291 181 6 176 462 16 288 6.13e-34 130
Msa1064440 MtrunA17_Chr8g0336321 25.591 465 306 12 6 457 2 439 7.83e-34 133
Msa1064440 MtrunA17_Chr4g0072761 25.549 501 287 18 7 480 11 452 8.63e-34 132
Msa1064440 MtrunA17_Chr3g0118721 32.013 303 150 8 182 483 42 289 1.01e-33 129
Msa1064440 MtrunA17_Chr3g0106251 32.567 261 146 7 219 476 53 286 1.93e-33 129
Msa1064440 MtrunA17_Chr4g0042931 27.756 508 295 19 6 485 2 465 2.20e-33 132
Msa1064440 MtrunA17_Chr6g0454171 28.662 314 185 8 175 483 30 309 2.63e-33 128
Msa1064440 MtrunA17_Chr3g0079711 37.629 194 96 5 301 480 3 185 1.96e-32 122
Msa1064440 MtrunA17_Chr6g0482061 28.803 493 301 21 1 470 1 466 2.19e-32 129
Msa1064440 MtrunA17_Chr4g0029131 25.828 453 275 15 7 442 8 416 4.61e-32 130
Msa1064440 MtrunA17_Chr4g0040691 24.792 480 285 13 6 458 3 433 1.10e-31 127
Msa1064440 MtrunA17_Chr6g0466831 25.380 461 296 15 10 459 17 440 2.11e-31 126
Msa1064440 MtrunA17_Chr6g0464091 27.885 416 264 14 10 411 17 410 4.24e-31 125
Msa1064440 MtrunA17_Chr8g0355011 27.321 377 197 11 121 483 48 361 6.98e-31 123
Msa1064440 MtrunA17_Chr5g0448551 26.379 417 256 17 12 410 8 391 2.58e-30 123
Msa1064440 MtrunA17_Chr4g0042891 26.139 505 309 19 6 485 2 467 3.06e-30 123
Msa1064440 MtrunA17_Chr6g0466841 24.946 461 298 15 10 459 17 440 5.32e-30 122
Msa1064440 MtrunA17_Chr2g0302851 26.068 468 284 17 10 459 15 438 9.90e-30 121
Msa1064440 MtrunA17_Chr4g0040711 24.792 480 285 15 6 458 3 433 1.44e-29 120
Msa1064440 MtrunA17_Chr6g0454371 34.973 183 102 4 301 483 5 170 1.24e-28 111
Msa1064440 MtrunA17_Chr8g0367221 27.251 411 257 15 10 402 797 1183 1.05e-27 117
Msa1064440 MtrunA17_Chr8g0367221 25.481 416 257 15 10 402 11 396 1.63e-23 105
Msa1064440 MtrunA17_Chr8g0367221 30.806 211 128 8 277 485 1548 1742 1.40e-16 83.2
Msa1064440 MtrunA17_Chr4g0029151 22.016 486 274 13 7 452 16 436 3.43e-27 114
Msa1064440 MtrunA17_Chr2g0283041 24.056 503 304 18 8 483 4 455 4.17e-27 113
Msa1064440 MtrunA17_Chr4g0039881 25.270 463 270 17 21 458 2 413 2.48e-26 111
Msa1064440 MtrunA17_Chr7g0232351 39.130 184 87 6 217 387 207 378 3.77e-26 109
Msa1064440 MtrunA17_Chr2g0319761 24.576 472 313 13 10 472 7 444 1.90e-25 108
Msa1064440 MtrunA17_Chr3g0092031 34.426 183 106 5 277 459 6 174 2.32e-25 103
Msa1064440 MtrunA17_Chr2g0319801 24.678 466 305 11 5 458 2 433 6.08e-25 107
Msa1064440 MtrunA17_Chr8g0337381 39.286 140 71 3 348 486 2 128 8.53e-25 99.8
Msa1064440 MtrunA17_Chr7g0250021 26.404 356 202 16 6 339 7 324 3.79e-24 103
Msa1064440 MtrunA17_Chr8g0336261 36.913 149 78 2 301 449 5 137 4.06e-24 97.8
Msa1064440 MtrunA17_Chr1g0207881 23.542 480 261 18 10 484 7 385 5.26e-24 103
Msa1064440 MtrunA17_Chr2g0319731 24.319 477 301 13 1 458 15 450 7.81e-24 104
Msa1064440 MtrunA17_Chr2g0319791 23.810 462 304 14 10 458 7 433 8.29e-24 103
Msa1064440 MtrunA17_Chr6g0454231 28.782 271 130 9 217 483 7 218 3.45e-23 102
Msa1064440 MtrunA17_Chr5g0431431 30.631 222 117 7 219 438 157 343 7.40e-23 100
Msa1064440 MtrunA17_Chr2g0319751 24.675 462 300 12 10 458 484 910 1.14e-22 102
Msa1064440 MtrunA17_Chr2g0319751 23.427 461 283 12 10 458 7 409 2.39e-22 101
Msa1064440 MtrunA17_Chr5g0427571 27.935 247 145 7 222 457 49 273 2.13e-21 94.7
Msa1064440 MtrunA17_Chr4g0029161 23.503 451 260 15 7 442 8 388 2.91e-21 96.3
Msa1064440 MtrunA17_Chr6g0477011 25.407 307 207 6 10 312 15 303 5.82e-16 79.0
Msa1064440 MtrunA17_Chr4g0066231 48.052 77 40 0 386 462 1 77 7.23e-16 72.4
Msa1064440 MtrunA17_Chr7g0272701 32.540 126 82 2 102 224 27 152 2.04e-14 70.9
Msa1064440 MtrunA17_Chr6g0454391 37.209 86 41 1 359 444 8 80 9.18e-12 62.4
Msa1064440 MtrunA17_Chr5g0426411 28.834 163 105 6 5 163 6 161 9.32e-12 63.5
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa1064440 AT2G15490.3 40.937 491 270 8 6 487 2 481 5.40e-131 389
Msa1064440 AT2G15490.1 40.688 494 270 8 6 487 2 484 1.90e-130 387
Msa1064440 AT2G15480.2 40.319 501 275 10 3 487 2 494 2.54e-128 382
Msa1064440 AT2G15480.1 40.081 494 276 8 3 487 2 484 2.80e-128 382
Msa1064440 AT2G36770.1 41.046 497 279 8 2 490 5 495 2.26e-127 380
Msa1064440 AT4G34131.1 41.785 493 264 11 3 485 2 481 4.16e-127 379
Msa1064440 AT2G36800.1 41.598 488 266 10 10 486 11 490 2.19e-124 372
Msa1064440 AT2G36780.1 39.798 495 288 7 2 490 5 495 5.61e-123 369
Msa1064440 AT4G34135.1 41.296 494 270 10 1 485 1 483 5.82e-123 368
Msa1064440 AT2G36750.1 40.491 489 276 9 10 490 9 490 3.83e-120 361
Msa1064440 AT2G36790.1 41.393 488 272 8 10 489 12 493 1.57e-119 360
Msa1064440 AT2G36760.1 39.157 498 289 8 2 491 5 496 1.84e-119 360
Msa1064440 AT4G34138.1 39.069 494 274 9 8 490 8 485 1.51e-112 342
Msa1064440 AT3G53160.1 37.295 488 288 10 6 483 3 482 2.03e-105 323
Msa1064440 AT3G53150.1 37.450 502 293 8 1 483 10 509 8.08e-104 320
Msa1064440 AT4G34135.2 39.091 330 190 5 1 322 1 327 7.57e-77 244
Msa1064440 AT5G14860.1 33.333 507 282 19 1 483 1 475 8.11e-69 228
Msa1064440 AT2G16890.2 32.143 504 288 17 11 494 9 478 2.59e-65 219
Msa1064440 AT1G10400.1 32.924 489 283 15 9 483 5 462 1.09e-63 214
Msa1064440 AT1G22400.1 31.373 510 308 16 1 490 1 488 2.33e-63 214
Msa1064440 AT1G22380.1 31.579 475 280 15 11 464 13 463 8.67e-62 210
Msa1064440 AT2G16890.3 32.265 437 250 14 11 428 9 418 4.55e-59 201
Msa1064440 AT1G22340.1 31.102 508 292 19 1 480 1 478 6.96e-59 202
Msa1064440 AT1G22360.1 29.020 510 302 14 1 483 1 477 2.82e-58 200
Msa1064440 AT1G73880.1 29.142 501 311 17 2 490 5 473 2.30e-56 195
Msa1064440 AT5G03490.1 29.959 484 290 15 11 484 19 463 3.24e-56 194
Msa1064440 AT1G78270.1 30.333 511 285 18 6 483 8 480 1.38e-55 193
Msa1064440 AT1G22360.2 29.773 440 264 11 1 414 1 421 6.02e-55 191
Msa1064440 AT1G22370.2 30.211 427 265 13 6 414 8 419 3.38e-54 189
Msa1064440 AT1G51210.1 29.412 459 269 18 11 459 20 433 4.96e-51 180
Msa1064440 AT2G31750.1 27.846 492 291 18 11 483 8 454 1.01e-50 179
Msa1064440 AT2G31750.2 27.846 492 291 18 11 483 8 454 2.20e-50 179
Msa1064440 AT4G15490.1 27.767 497 297 16 11 483 8 466 1.11e-49 177
Msa1064440 AT1G05675.1 28.125 480 299 13 11 480 6 449 1.49e-49 176
Msa1064440 AT5G12890.1 26.411 496 322 13 8 482 7 480 1.21e-48 174
Msa1064440 AT3G02100.1 28.429 503 294 18 3 485 5 461 2.36e-48 173
Msa1064440 AT1G06000.1 28.953 487 269 15 11 483 10 433 3.47e-48 172
Msa1064440 AT4G15480.1 27.146 501 316 16 1 483 9 478 4.12e-48 173
Msa1064440 AT4G01070.1 30.297 505 285 20 11 488 8 472 4.59e-48 173
Msa1064440 AT1G24100.1 29.098 488 291 18 11 483 11 458 1.08e-47 171
Msa1064440 AT3G11340.1 29.243 489 282 16 12 486 9 447 1.43e-47 171
Msa1064440 AT1G01420.2 29.341 501 290 19 1 476 1 462 1.68e-47 171
Msa1064440 AT5G05870.1 27.721 487 310 13 5 483 2 454 2.43e-47 171
Msa1064440 AT1G01420.1 29.555 494 284 19 8 476 5 459 5.31e-47 170
Msa1064440 AT4G15500.1 26.946 501 299 20 11 487 9 466 1.06e-46 169
Msa1064440 AT5G26310.1 28.320 512 279 20 11 484 7 468 2.08e-46 168
Msa1064440 AT3G50740.1 28.125 512 290 19 11 486 7 476 2.51e-46 168
Msa1064440 AT2G18570.1 27.345 501 293 21 8 478 2 461 3.57e-46 167
Msa1064440 AT5G05860.1 27.105 487 293 16 4 476 2 440 4.92e-46 167
Msa1064440 AT1G05680.1 27.651 481 300 14 11 480 6 449 9.15e-46 166
Msa1064440 AT2G30150.2 27.545 501 280 17 11 486 13 455 2.55e-45 165
Msa1064440 AT2G43820.1 27.310 487 305 16 7 485 3 448 5.65e-45 164
Msa1064440 AT2G31790.1 26.694 487 299 14 11 480 8 453 7.27e-45 164
Msa1064440 AT2G28080.1 27.500 480 311 13 15 485 22 473 1.49e-44 163
Msa1064440 AT2G29730.1 26.453 499 310 16 10 487 4 466 1.59e-44 163
Msa1064440 AT5G05880.1 27.038 503 293 14 5 486 2 451 2.73e-44 162
Msa1064440 AT2G43840.1 27.629 485 296 17 11 484 7 447 3.19e-44 162
Msa1064440 AT2G43840.2 27.423 485 297 17 11 484 7 447 6.36e-44 161
Msa1064440 AT2G30150.1 27.163 497 279 17 15 486 1 439 1.04e-43 160
Msa1064440 AT3G21560.1 27.126 494 306 19 11 483 12 472 1.07e-43 161
Msa1064440 AT3G21760.1 26.796 515 301 18 9 483 2 480 2.46e-43 160
Msa1064440 AT3G16520.3 30.133 375 212 13 122 480 116 456 3.58e-43 159
Msa1064440 AT4G36770.1 28.370 497 267 19 9 469 2 445 4.14e-43 159
Msa1064440 AT2G36970.1 26.163 516 316 16 1 490 1 477 4.42e-43 159
Msa1064440 AT4G15550.1 27.273 495 302 17 11 482 13 472 6.70e-43 159
Msa1064440 AT5G05900.1 27.551 490 290 16 8 481 5 445 6.75e-43 158
Msa1064440 AT3G21800.1 26.130 509 308 17 8 483 2 475 9.74e-43 158
Msa1064440 AT4G14090.1 26.693 502 288 18 6 482 8 454 2.07e-42 157
Msa1064440 AT5G59590.1 25.948 501 301 16 1 483 1 449 2.17e-42 157
Msa1064440 AT5G66690.1 26.448 518 285 17 11 486 7 470 4.53e-42 156
Msa1064440 AT3G55700.1 27.088 491 298 15 11 486 8 453 2.63e-41 154
Msa1064440 AT2G30140.1 26.263 495 288 14 8 480 9 448 3.80e-41 153
Msa1064440 AT3G16520.1 30.278 360 207 13 122 468 116 444 8.34e-41 152
Msa1064440 AT3G16520.2 30.028 363 204 13 122 468 116 444 9.83e-41 152
Msa1064440 AT2G23250.1 28.814 472 283 17 21 483 8 435 1.06e-40 152
Msa1064440 AT3G46700.1 27.143 490 290 16 11 485 9 446 1.15e-40 152
Msa1064440 AT3G21790.1 26.471 510 307 18 9 483 2 478 1.59e-40 152
Msa1064440 AT3G46660.1 28.745 494 283 17 12 486 15 458 2.10e-40 151
Msa1064440 AT2G29740.1 26.953 512 307 18 1 483 1 474 2.18e-40 152
Msa1064440 AT3G21780.1 24.303 502 318 17 9 483 2 468 2.85e-40 151
Msa1064440 AT3G46680.1 25.615 488 297 16 11 481 9 447 3.68e-40 150
Msa1064440 AT4G15260.1 28.533 375 218 9 132 483 7 354 4.00e-40 148
Msa1064440 AT2G30140.2 26.263 495 287 15 8 480 9 447 5.93e-40 150
Msa1064440 AT5G59580.1 26.210 496 292 17 11 486 9 450 1.54e-39 149
Msa1064440 AT4G15280.2 26.604 530 292 22 1 483 26 505 2.19e-39 150
Msa1064440 AT5G05890.1 25.494 506 301 13 5 486 2 455 2.46e-39 149
Msa1064440 AT1G07240.1 25.852 499 314 14 12 483 6 475 3.88e-39 148
Msa1064440 AT1G05530.1 25.911 494 305 15 9 483 3 454 4.48e-39 148
Msa1064440 AT3G46670.1 26.908 498 287 17 11 486 9 451 4.54e-39 147
Msa1064440 AT1G07250.1 27.799 518 282 22 9 483 4 472 7.31e-39 147
Msa1064440 AT5G38010.1 25.692 506 300 15 1 483 1 453 9.64e-39 147
Msa1064440 AT2G23260.1 27.273 484 305 19 9 483 8 453 9.73e-39 147
Msa1064440 AT4G15280.1 26.820 522 285 22 9 483 2 473 1.10e-38 147
Msa1064440 AT1G07260.1 25.595 504 310 18 9 483 4 471 2.73e-38 146
Msa1064440 AT1G01390.1 29.482 502 283 20 8 480 5 464 4.72e-38 145
Msa1064440 AT1G01390.2 29.960 494 275 20 8 472 22 473 5.09e-38 145
Msa1064440 AT2G18560.1 34.112 214 121 5 275 478 168 371 1.45e-37 142
Msa1064440 AT2G15490.2 32.275 189 120 2 6 186 2 190 4.09e-37 138
Msa1064440 AT2G15490.2 32.540 126 78 3 363 487 151 270 6.51e-12 66.6
Msa1064440 AT2G26480.1 26.316 494 285 18 9 480 6 442 1.69e-36 140
Msa1064440 AT3G46650.1 26.105 475 283 15 11 476 10 425 1.97e-36 140
Msa1064440 AT1G22370.1 33.478 230 144 5 190 414 24 249 4.59e-36 136
Msa1064440 AT3G55710.1 27.551 490 307 15 11 489 8 460 5.55e-36 139
Msa1064440 AT2G29710.1 25.703 498 303 18 12 483 6 462 6.85e-36 139
Msa1064440 AT3G21750.1 26.113 494 319 17 9 483 2 468 3.71e-35 137
Msa1064440 AT5G38040.1 25.786 477 297 13 19 483 18 449 7.14e-34 133
Msa1064440 AT5G65550.1 26.819 481 285 19 9 460 7 449 7.57e-34 133
Msa1064440 AT3G46690.1 25.255 491 303 12 11 485 9 451 9.71e-34 133
Msa1064440 AT5G49690.1 25.151 497 307 17 10 491 9 455 1.67e-33 132
Msa1064440 AT3G46720.1 25.859 495 286 15 11 485 9 442 3.11e-33 131
Msa1064440 AT1G05560.1 25.709 494 299 18 11 483 5 451 4.84e-33 131
Msa1064440 AT1G05560.2 25.709 494 299 18 11 483 55 501 7.51e-33 131
Msa1064440 AT2G29750.1 26.148 501 307 20 11 483 8 473 9.91e-32 127
Msa1064440 AT1G30530.1 26.804 485 297 19 11 483 12 450 2.15e-31 126
Msa1064440 AT2G16890.4 31.153 321 181 12 11 312 9 308 9.62e-30 119
Msa1064440 AT2G16890.1 31.153 321 181 12 11 312 9 308 9.62e-30 119
Msa1064440 AT5G17050.1 23.529 493 309 16 11 483 12 456 1.75e-29 121
Msa1064440 AT3G29630.1 25.410 488 316 15 8 490 3 447 7.95e-29 119
Msa1064440 AT3G29630.2 26.078 487 288 17 8 490 3 421 1.34e-28 117
Msa1064440 AT5G17030.1 25.049 507 297 21 4 483 5 455 3.63e-28 117
Msa1064440 AT4G27570.1 25.764 458 269 17 9 447 5 410 1.17e-27 115
Msa1064440 AT3G22250.1 24.540 489 289 18 12 467 9 450 7.45e-27 113
Msa1064440 AT5G17040.1 23.361 488 306 17 11 483 5 439 1.27e-26 112
Msa1064440 AT2G22590.1 25.424 472 293 15 8 458 12 445 1.28e-26 112
Msa1064440 AT5G17040.2 28.413 271 164 7 214 483 96 337 1.89e-26 110
Msa1064440 AT4G27560.1 25.877 456 271 18 9 447 5 410 2.93e-26 111
Msa1064440 AT1G50580.1 26.170 470 270 19 8 457 3 415 2.30e-24 105
Msa1064440 AT1G64910.1 23.855 415 271 12 10 416 5 382 6.67e-24 104
Msa1064440 AT5G53990.1 24.516 465 273 18 10 454 5 411 8.01e-22 98.6
Msa1064440 AT5G54010.1 24.532 481 273 20 8 464 3 417 9.79e-22 98.2
Msa1064440 AT1G64920.1 22.954 501 305 20 8 486 3 444 4.12e-21 96.3
Msa1064440 AT5G37950.1 25.574 305 190 9 94 387 65 343 6.23e-20 91.7
Msa1064440 AT2G22930.1 22.981 483 315 17 10 484 5 438 7.91e-20 92.4
Msa1064440 AT4G09500.1 24.017 458 270 18 9 458 4 391 1.07e-19 91.7
Msa1064440 AT4G09500.2 23.941 472 278 18 9 458 4 416 2.62e-19 90.9
Msa1064440 AT5G37950.2 36.885 122 71 3 268 387 220 337 7.79e-19 88.2
Msa1064440 AT5G54060.1 20.968 496 330 16 8 480 10 466 1.69e-15 79.3
Msa1064440 AT4G01070.2 26.519 362 207 17 11 341 8 341 4.07e-15 77.0

Find 100 sgRNAs with CRISPR-Local

Find 256 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
AATCCTGCCGCTGCCTATTT+TGG 0.139831 7_2:+57060852 Msa1064440:CDS
GAGCAAAAGAACATAATTTA+TGG 0.225380 7_2:+57061495 Msa1064440:CDS
TCCTCATTTCTTTGCTCTCT+TGG 0.225932 7_2:-57061592 None:intergenic
GCAACTTCTCATTGTAAAAT+TGG 0.243211 7_2:-57061439 None:intergenic
GCCACTTCACTTGAAATTCT+TGG 0.268252 7_2:+57060525 Msa1064440:CDS
GTCTATACTTCATCATTAAA+TGG 0.271841 7_2:-57060725 None:intergenic
CAACAAGGTTAATGAGAAAA+AGG 0.298342 7_2:+57061013 Msa1064440:CDS
GGCACCACAGCTGTTGATAT+TGG 0.309956 7_2:+57061313 Msa1064440:CDS
AGGGCTATATCATATGGAAT+TGG 0.320112 7_2:+57061291 Msa1064440:CDS
AAGGATGAAAGAAAGCAAAA+AGG 0.321576 7_2:+57061271 Msa1064440:CDS
ACACAGAAATTTACAATTCC+TGG 0.324450 7_2:+57060771 Msa1064440:CDS
AGTCTTGCTGTGTCAATCAT+AGG 0.326235 7_2:-57060330 None:intergenic
GTCACAATCCCTCCGGTTGC+AGG 0.329054 7_2:-57061341 None:intergenic
GTGATGTAATAATGAATTCT+TGG 0.333100 7_2:-57060678 None:intergenic
AAACAACATGAAGTTGGTTA+TGG 0.334994 7_2:-57060275 None:intergenic
TTTCTTCCATTTCCCTCAGC+TGG 0.347602 7_2:+57060297 Msa1064440:CDS
GGATGGCACAGTTGGAGAAT+TGG 0.354123 7_2:-57060704 None:intergenic
TTCATGCATTGGTCCAAAAT+AGG 0.360513 7_2:-57060865 None:intergenic
AAACTTAGTAAGACTACAAT+GGG 0.383326 7_2:+57060951 Msa1064440:CDS
GAAATCATTGAAGAAATCTA+AGG 0.391534 7_2:+57061706 Msa1064440:CDS
AACAACATGAAGTTGGTTAT+GGG 0.392319 7_2:-57060274 None:intergenic
AGCAAAAGAACATAATTTAT+GGG 0.402653 7_2:+57061496 Msa1064440:CDS
TTCTTTGCATGTAACCAATC+AGG 0.407903 7_2:-57060831 None:intergenic
TTGTTGATCCAAGCTGAAAC+TGG 0.411564 7_2:-57060996 None:intergenic
TGCAGAGAAAGTGGTGAGAA+GGG 0.417082 7_2:+57061529 Msa1064440:CDS
TCAAGGAGTAAGGATGCTTC+AGG 0.425756 7_2:+57060557 Msa1064440:CDS
TCTGTATTGTATGTATGTTT+TGG 0.426684 7_2:+57061110 Msa1064440:CDS
CTACACATGCCAATGCTTCA+AGG 0.435971 7_2:+57060388 Msa1064440:CDS
CTACAATGGGGATCAAATCT+TGG 0.436907 7_2:+57060964 Msa1064440:CDS
GAGCATGAGGAAACCTAGTA+TGG 0.437301 7_2:-57061136 None:intergenic
AAGAGGAAGAATGGCTAGAT+TGG 0.439920 7_2:+57061066 Msa1064440:CDS
ACCTTCCTCTATAGTCCTCT+TGG 0.448985 7_2:-57061642 None:intergenic
ATATGGCCAGCTGAGGGAAA+TGG 0.451965 7_2:-57060303 None:intergenic
GGGCTATATCATATGGAATT+GGG 0.452750 7_2:+57061292 Msa1064440:CDS
TCCTGCAAGAATTTGAGAAA+AGG 0.458681 7_2:+57061252 Msa1064440:CDS
CTCCTCTGGAAGTTCCTGAT+TGG 0.459643 7_2:+57060817 Msa1064440:CDS
ATAGACACTGACATCAGTTC+AGG 0.460139 7_2:+57060423 Msa1064440:CDS
TGTCAATCATAGGGTTCATA+TGG 0.461840 7_2:-57060320 None:intergenic
GTAAAATCATTCAAGGAGTA+AGG 0.462825 7_2:+57060547 Msa1064440:CDS
GAATCAGAGAAAAGAAGTTA+TGG 0.476056 7_2:+57060885 Msa1064440:CDS
ATGCAGAGAAAGTGGTGAGA+AGG 0.478166 7_2:+57061528 Msa1064440:CDS
CATAGAGGAACTTGCGAAAG+AGG 0.483596 7_2:+57061049 Msa1064440:CDS
ATTCTTGGTAAAATCATTCA+AGG 0.484152 7_2:+57060540 Msa1064440:CDS
CATTAAATGGATGGCACAGT+TGG 0.487293 7_2:-57060712 None:intergenic
ACCAAGAATTTCAAGTGAAG+TGG 0.491909 7_2:-57060526 None:intergenic
AACACCGGCCACGTAATCAT+TGG 0.492199 7_2:-57061410 None:intergenic
TACAATTGAGATGACTCCTC+TGG 0.492446 7_2:+57060803 Msa1064440:CDS
ATATTGGAACACCCTGCAAC+CGG 0.495925 7_2:+57061329 Msa1064440:CDS
GTGGAAGCAGCTGCAAAACT+AGG 0.504983 7_2:+57060651 Msa1064440:CDS
CAGTTCCCTTCAGCTCAAGT+TGG 0.509931 7_2:+57060471 Msa1064440:CDS
ACTATTGAAAGCATAAATGC+TGG 0.513228 7_2:+57061383 Msa1064440:CDS
GAGAAGGGAAGAGATAGTTA+AGG 0.514567 7_2:+57061544 Msa1064440:CDS
ATATCAGAGACTATGCAATC+TGG 0.516846 7_2:-57060612 None:intergenic
AACTTGCGAAAGAGGAAGAA+TGG 0.527218 7_2:+57061057 Msa1064440:CDS
AGGATGAGAGCAAAGAAACT+TGG 0.527542 7_2:+57061611 Msa1064440:CDS
GCAGCTGCTTCCACTGTCCA+CGG 0.535127 7_2:-57060642 None:intergenic
GGGAGACCAACTTGAGCTGA+AGG 0.537436 7_2:-57060477 None:intergenic
TAACATTAATGCAGAGAAAG+TGG 0.537539 7_2:+57061520 Msa1064440:CDS
GTCTTGCTGTGTCAATCATA+GGG 0.544513 7_2:-57060329 None:intergenic
TCACAATCCCTCCGGTTGCA+GGG 0.545569 7_2:-57061340 None:intergenic
GGTCCAAAATAGGCAGCGGC+AGG 0.551932 7_2:-57060855 None:intergenic
TTTGCCAATGATTACGTGGC+CGG 0.556848 7_2:+57061406 Msa1064440:CDS
CAACTTGTAGAAATTGCGCA+TGG 0.559449 7_2:+57061158 Msa1064440:CDS
ATACTTCATCATTAAATGGA+TGG 0.562120 7_2:-57060721 None:intergenic
GGGATCAAATCTTGGAGTGT+AGG 0.562776 7_2:+57060972 Msa1064440:CDS
ACCAAGAGAGCAAAGAAATG+AGG 0.564369 7_2:+57061591 Msa1064440:CDS
TCAATTGTATGAGGCAAACC+AGG 0.565982 7_2:-57060789 None:intergenic
GATAAAGATGAAGATGGAGA+TGG 0.566747 7_2:+57061227 Msa1064440:CDS
TTGAAGAAATCTAAGGCACT+TGG 0.574510 7_2:+57061713 Msa1064440:CDS
GGAGTCATCTCAATTGTATG+AGG 0.575171 7_2:-57060798 None:intergenic
GTGTAGGACCAGTTTCAGCT+TGG 0.580002 7_2:+57060988 Msa1064440:CDS
GGATTGTGACTCATTGTGGT+TGG 0.583232 7_2:+57061354 Msa1064440:CDS
AACTTGTAGAAATTGCGCAT+GGG 0.583832 7_2:+57061159 Msa1064440:CDS
ATTTCTACAAGTTGAGCATG+AGG 0.596842 7_2:-57061149 None:intergenic
GCTCAAGTTGGTCTCCCTGA+CGG 0.597767 7_2:+57060483 Msa1064440:CDS
ATTGGCATGTGTAGTGATGA+TGG 0.600742 7_2:-57060379 None:intergenic
AAAACTTAGTAAGACTACAA+TGG 0.601608 7_2:+57060950 Msa1064440:CDS
AGGGTTCATATGGCCAGCTG+AGG 0.601679 7_2:-57060310 None:intergenic
GCAAGACTATTTGCAAAGCA+TGG 0.602004 7_2:+57060345 Msa1064440:CDS
TGCTGCCAAGAGGACTATAG+AGG 0.613396 7_2:+57061637 Msa1064440:CDS
ACAATGAGTCACAATCCCTC+CGG 0.620558 7_2:-57061348 None:intergenic
GGAGACCAACTTGAGCTGAA+GGG 0.621494 7_2:-57060476 None:intergenic
CATTGGTCCAAAATAGGCAG+CGG 0.626587 7_2:-57060859 None:intergenic
GGGTTCATATGGCCAGCTGA+GGG 0.630744 7_2:-57060309 None:intergenic
GCCAAGAGGACTATAGAGGA+AGG 0.631460 7_2:+57061641 Msa1064440:CDS
TAAAATTGGTCAGCAAACAC+CGG 0.633866 7_2:-57061425 None:intergenic
CTGGTTTGCCAATGATTACG+TGG 0.638379 7_2:+57061402 Msa1064440:CDS
AGTTTCAGCTTGGATCAACA+AGG 0.639613 7_2:+57060998 Msa1064440:CDS
TTGGAACACCCTGCAACCGG+AGG 0.640760 7_2:+57061332 Msa1064440:CDS
TTGAAGATAGGGATCCCTGT+AGG 0.641117 7_2:+57061473 Msa1064440:CDS
GGAGGGATTGTGACTCATTG+TGG 0.643212 7_2:+57061350 Msa1064440:CDS
TCAGAAACTAAATTATCATG+AGG 0.644747 7_2:-57060747 None:intergenic
TGGAACACCCTGCAACCGGA+GGG 0.662971 7_2:+57061333 Msa1064440:CDS
TGTTCCAATATCAACAGCTG+TGG 0.667359 7_2:-57061317 None:intergenic
AACTTGGTGATGCTGCCAAG+AGG 0.668809 7_2:+57061627 Msa1064440:CDS
AACCAATCAGGAACTTCCAG+AGG 0.675298 7_2:-57060819 None:intergenic
TCTCTGATATGATGTATCCG+TGG 0.682925 7_2:+57060625 Msa1064440:CDS
AAGAGGACTATAGAGGAAGG+TGG 0.683468 7_2:+57061644 Msa1064440:CDS
TATGATGTATCCGTGGACAG+TGG 0.722561 7_2:+57060632 Msa1064440:CDS
AACTTAGTAAGACTACAATG+GGG 0.812594 7_2:+57060952 Msa1064440:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! AAAAATGATAAAGATGAAGA+TGG + chr7_2:57061221-57061240 Msa1064440:CDS 20.0%
!! AGCAAAAGAACATAATTTAT+GGG + chr7_2:57061496-57061515 Msa1064440:CDS 20.0%
!! AAAAATGATAAAGATGAAGA+TGG + chr7_2:57061221-57061240 Msa1064440:CDS 20.0%
!! AGCAAAAGAACATAATTTAT+GGG + chr7_2:57061496-57061515 Msa1064440:CDS 20.0%
! ATTCTTGGTAAAATCATTCA+AGG + chr7_2:57060540-57060559 Msa1064440:CDS 25.0%
! GTGATGTAATAATGAATTCT+TGG - chr7_2:57060681-57060700 None:intergenic 25.0%
! ATACTTCATCATTAAATGGA+TGG - chr7_2:57060724-57060743 None:intergenic 25.0%
! GTCTATACTTCATCATTAAA+TGG - chr7_2:57060728-57060747 None:intergenic 25.0%
! TCAGAAACTAAATTATCATG+AGG - chr7_2:57060750-57060769 None:intergenic 25.0%
! AAAACTTAGTAAGACTACAA+TGG + chr7_2:57060950-57060969 Msa1064440:CDS 25.0%
! AAACTTAGTAAGACTACAAT+GGG + chr7_2:57060951-57060970 Msa1064440:CDS 25.0%
!! TCTGTATTGTATGTATGTTT+TGG + chr7_2:57061110-57061129 Msa1064440:CDS 25.0%
!! AATCAGGTCAAAATTTTATC+TGG + chr7_2:57061189-57061208 Msa1064440:CDS 25.0%
!! ATCAGGTCAAAATTTTATCT+GGG + chr7_2:57061190-57061209 Msa1064440:CDS 25.0%
!!! TTGTTGATGTTTTGAAGATA+GGG + chr7_2:57061462-57061481 Msa1064440:CDS 25.0%
! GAGCAAAAGAACATAATTTA+TGG + chr7_2:57061495-57061514 Msa1064440:CDS 25.0%
! GAAATCATTGAAGAAATCTA+AGG + chr7_2:57061706-57061725 Msa1064440:CDS 25.0%
! ATTCTTGGTAAAATCATTCA+AGG + chr7_2:57060540-57060559 Msa1064440:CDS 25.0%
! GTGATGTAATAATGAATTCT+TGG - chr7_2:57060681-57060700 None:intergenic 25.0%
! ATACTTCATCATTAAATGGA+TGG - chr7_2:57060724-57060743 None:intergenic 25.0%
! GTCTATACTTCATCATTAAA+TGG - chr7_2:57060728-57060747 None:intergenic 25.0%
! TCAGAAACTAAATTATCATG+AGG - chr7_2:57060750-57060769 None:intergenic 25.0%
! AAAACTTAGTAAGACTACAA+TGG + chr7_2:57060950-57060969 Msa1064440:CDS 25.0%
! AAACTTAGTAAGACTACAAT+GGG + chr7_2:57060951-57060970 Msa1064440:CDS 25.0%
!! TCTGTATTGTATGTATGTTT+TGG + chr7_2:57061110-57061129 Msa1064440:CDS 25.0%
!! AATCAGGTCAAAATTTTATC+TGG + chr7_2:57061189-57061208 Msa1064440:CDS 25.0%
!! ATCAGGTCAAAATTTTATCT+GGG + chr7_2:57061190-57061209 Msa1064440:CDS 25.0%
!!! TTGTTGATGTTTTGAAGATA+GGG + chr7_2:57061462-57061481 Msa1064440:CDS 25.0%
! GAGCAAAAGAACATAATTTA+TGG + chr7_2:57061495-57061514 Msa1064440:CDS 25.0%
! GAAATCATTGAAGAAATCTA+AGG + chr7_2:57061706-57061725 Msa1064440:CDS 25.0%
! AACAACATGAAGTTGGTTAT+GGG - chr7_2:57060277-57060296 None:intergenic 30.0%
! AAACAACATGAAGTTGGTTA+TGG - chr7_2:57060278-57060297 None:intergenic 30.0%
GAAGAAAAACAACATGAAGT+TGG - chr7_2:57060284-57060303 None:intergenic 30.0%
!!! TGTCAGTGTCTATTGATTTT+TGG - chr7_2:57060416-57060435 None:intergenic 30.0%
!! CTGAATAAGTTGAGTTTTGA+TGG - chr7_2:57060454-57060473 None:intergenic 30.0%
GTAAAATCATTCAAGGAGTA+AGG + chr7_2:57060547-57060566 Msa1064440:CDS 30.0%
ACACAGAAATTTACAATTCC+TGG + chr7_2:57060771-57060790 Msa1064440:CDS 30.0%
GAATCAGAGAAAAGAAGTTA+TGG + chr7_2:57060885-57060904 Msa1064440:CDS 30.0%
! ATACAACAGTTTTCATGAAC+TGG + chr7_2:57060914-57060933 Msa1064440:CDS 30.0%
AACTTAGTAAGACTACAATG+GGG + chr7_2:57060952-57060971 Msa1064440:CDS 30.0%
CAACAAGGTTAATGAGAAAA+AGG + chr7_2:57061013-57061032 Msa1064440:CDS 30.0%
TTAATGAGAAAAAGGCCAAT+GGG + chr7_2:57061021-57061040 Msa1064440:CDS 30.0%
AAGGATGAAAGAAAGCAAAA+AGG + chr7_2:57061271-57061290 Msa1064440:CDS 30.0%
AGGATGAAAGAAAGCAAAAA+GGG + chr7_2:57061272-57061291 Msa1064440:CDS 30.0%
! ACTATTGAAAGCATAAATGC+TGG + chr7_2:57061383-57061402 Msa1064440:CDS 30.0%
GCAACTTCTCATTGTAAAAT+TGG - chr7_2:57061442-57061461 None:intergenic 30.0%
!!! CTTGTTGATGTTTTGAAGAT+AGG + chr7_2:57061461-57061480 Msa1064440:CDS 30.0%
TAACATTAATGCAGAGAAAG+TGG + chr7_2:57061520-57061539 Msa1064440:CDS 30.0%
! AACAACATGAAGTTGGTTAT+GGG - chr7_2:57060277-57060296 None:intergenic 30.0%
! AAACAACATGAAGTTGGTTA+TGG - chr7_2:57060278-57060297 None:intergenic 30.0%
GAAGAAAAACAACATGAAGT+TGG - chr7_2:57060284-57060303 None:intergenic 30.0%
!!! TGTCAGTGTCTATTGATTTT+TGG - chr7_2:57060416-57060435 None:intergenic 30.0%
!! CTGAATAAGTTGAGTTTTGA+TGG - chr7_2:57060454-57060473 None:intergenic 30.0%
GTAAAATCATTCAAGGAGTA+AGG + chr7_2:57060547-57060566 Msa1064440:CDS 30.0%
ACACAGAAATTTACAATTCC+TGG + chr7_2:57060771-57060790 Msa1064440:CDS 30.0%
GAATCAGAGAAAAGAAGTTA+TGG + chr7_2:57060885-57060904 Msa1064440:CDS 30.0%
! ATACAACAGTTTTCATGAAC+TGG + chr7_2:57060914-57060933 Msa1064440:CDS 30.0%
AACTTAGTAAGACTACAATG+GGG + chr7_2:57060952-57060971 Msa1064440:CDS 30.0%
CAACAAGGTTAATGAGAAAA+AGG + chr7_2:57061013-57061032 Msa1064440:CDS 30.0%
TTAATGAGAAAAAGGCCAAT+GGG + chr7_2:57061021-57061040 Msa1064440:CDS 30.0%
AAGGATGAAAGAAAGCAAAA+AGG + chr7_2:57061271-57061290 Msa1064440:CDS 30.0%
AGGATGAAAGAAAGCAAAAA+GGG + chr7_2:57061272-57061291 Msa1064440:CDS 30.0%
! ACTATTGAAAGCATAAATGC+TGG + chr7_2:57061383-57061402 Msa1064440:CDS 30.0%
GCAACTTCTCATTGTAAAAT+TGG - chr7_2:57061442-57061461 None:intergenic 30.0%
!!! CTTGTTGATGTTTTGAAGAT+AGG + chr7_2:57061461-57061480 Msa1064440:CDS 30.0%
TAACATTAATGCAGAGAAAG+TGG + chr7_2:57061520-57061539 Msa1064440:CDS 30.0%
TGTCAATCATAGGGTTCATA+TGG - chr7_2:57060323-57060342 None:intergenic 35.0%
!!! TTTTTGGAACCTTGAAGCAT+TGG - chr7_2:57060400-57060419 None:intergenic 35.0%
! ACCAAGAATTTCAAGTGAAG+TGG - chr7_2:57060529-57060548 None:intergenic 35.0%
ATATCAGAGACTATGCAATC+TGG - chr7_2:57060615-57060634 None:intergenic 35.0%
TTCTTTGCATGTAACCAATC+AGG - chr7_2:57060834-57060853 None:intergenic 35.0%
! TTCATGCATTGGTCCAAAAT+AGG - chr7_2:57060868-57060887 None:intergenic 35.0%
! CTTTTCTCTGATTCATGCAT+TGG - chr7_2:57060879-57060898 None:intergenic 35.0%
GTTAATGAGAAAAAGGCCAA+TGG + chr7_2:57061020-57061039 Msa1064440:CDS 35.0%
TAATGAGAAAAAGGCCAATG+GGG + chr7_2:57061022-57061041 Msa1064440:CDS 35.0%
! ATTTCTACAAGTTGAGCATG+AGG - chr7_2:57061152-57061171 None:intergenic 35.0%
AACTTGTAGAAATTGCGCAT+GGG + chr7_2:57061159-57061178 Msa1064440:CDS 35.0%
GATAAAGATGAAGATGGAGA+TGG + chr7_2:57061227-57061246 Msa1064440:CDS 35.0%
TCCTGCAAGAATTTGAGAAA+AGG + chr7_2:57061252-57061271 Msa1064440:CDS 35.0%
! TCCTTTTCTCAAATTCTTGC+AGG - chr7_2:57061256-57061275 None:intergenic 35.0%
GCAAAAAGGGCTATATCATA+TGG + chr7_2:57061285-57061304 Msa1064440:CDS 35.0%
AGGGCTATATCATATGGAAT+TGG + chr7_2:57061291-57061310 Msa1064440:CDS 35.0%
GGGCTATATCATATGGAATT+GGG + chr7_2:57061292-57061311 Msa1064440:CDS 35.0%
TAAAATTGGTCAGCAAACAC+CGG - chr7_2:57061428-57061447 None:intergenic 35.0%
! TATGTTCTTTTGCTCCTACA+GGG - chr7_2:57061490-57061509 None:intergenic 35.0%
! TTATGTTCTTTTGCTCCTAC+AGG - chr7_2:57061491-57061510 None:intergenic 35.0%
! TAAGGCTGTGAAGATTTTGA+TGG + chr7_2:57061562-57061581 Msa1064440:CDS 35.0%
!! AAGGCTGTGAAGATTTTGAT+GGG + chr7_2:57061563-57061582 Msa1064440:CDS 35.0%
! TTGAAGAAATCTAAGGCACT+TGG + chr7_2:57061713-57061732 Msa1064440:CDS 35.0%
TGTCAATCATAGGGTTCATA+TGG - chr7_2:57060323-57060342 None:intergenic 35.0%
!!! TTTTTGGAACCTTGAAGCAT+TGG - chr7_2:57060400-57060419 None:intergenic 35.0%
! ACCAAGAATTTCAAGTGAAG+TGG - chr7_2:57060529-57060548 None:intergenic 35.0%
ATATCAGAGACTATGCAATC+TGG - chr7_2:57060615-57060634 None:intergenic 35.0%
TTCTTTGCATGTAACCAATC+AGG - chr7_2:57060834-57060853 None:intergenic 35.0%
! TTCATGCATTGGTCCAAAAT+AGG - chr7_2:57060868-57060887 None:intergenic 35.0%
! CTTTTCTCTGATTCATGCAT+TGG - chr7_2:57060879-57060898 None:intergenic 35.0%
GTTAATGAGAAAAAGGCCAA+TGG + chr7_2:57061020-57061039 Msa1064440:CDS 35.0%
TAATGAGAAAAAGGCCAATG+GGG + chr7_2:57061022-57061041 Msa1064440:CDS 35.0%
! ATTTCTACAAGTTGAGCATG+AGG - chr7_2:57061152-57061171 None:intergenic 35.0%
AACTTGTAGAAATTGCGCAT+GGG + chr7_2:57061159-57061178 Msa1064440:CDS 35.0%
GATAAAGATGAAGATGGAGA+TGG + chr7_2:57061227-57061246 Msa1064440:CDS 35.0%
TCCTGCAAGAATTTGAGAAA+AGG + chr7_2:57061252-57061271 Msa1064440:CDS 35.0%
! TCCTTTTCTCAAATTCTTGC+AGG - chr7_2:57061256-57061275 None:intergenic 35.0%
GCAAAAAGGGCTATATCATA+TGG + chr7_2:57061285-57061304 Msa1064440:CDS 35.0%
AGGGCTATATCATATGGAAT+TGG + chr7_2:57061291-57061310 Msa1064440:CDS 35.0%
GGGCTATATCATATGGAATT+GGG + chr7_2:57061292-57061311 Msa1064440:CDS 35.0%
TAAAATTGGTCAGCAAACAC+CGG - chr7_2:57061428-57061447 None:intergenic 35.0%
! TATGTTCTTTTGCTCCTACA+GGG - chr7_2:57061490-57061509 None:intergenic 35.0%
! TTATGTTCTTTTGCTCCTAC+AGG - chr7_2:57061491-57061510 None:intergenic 35.0%
! TAAGGCTGTGAAGATTTTGA+TGG + chr7_2:57061562-57061581 Msa1064440:CDS 35.0%
!! AAGGCTGTGAAGATTTTGAT+GGG + chr7_2:57061563-57061582 Msa1064440:CDS 35.0%
! TTGAAGAAATCTAAGGCACT+TGG + chr7_2:57061713-57061732 Msa1064440:CDS 35.0%
! GTCTTGCTGTGTCAATCATA+GGG - chr7_2:57060332-57060351 None:intergenic 40.0%
! AGTCTTGCTGTGTCAATCAT+AGG - chr7_2:57060333-57060352 None:intergenic 40.0%
GCAAGACTATTTGCAAAGCA+TGG + chr7_2:57060345-57060364 Msa1064440:CDS 40.0%
ATTGGCATGTGTAGTGATGA+TGG - chr7_2:57060382-57060401 None:intergenic 40.0%
ATAGACACTGACATCAGTTC+AGG + chr7_2:57060423-57060442 Msa1064440:CDS 40.0%
! TCGTGTTTTCAATACCGTCA+GGG - chr7_2:57060500-57060519 None:intergenic 40.0%
! TTCGTGTTTTCAATACCGTC+AGG - chr7_2:57060501-57060520 None:intergenic 40.0%
GCCACTTCACTTGAAATTCT+TGG + chr7_2:57060525-57060544 Msa1064440:CDS 40.0%
TCTCTGATATGATGTATCCG+TGG + chr7_2:57060625-57060644 Msa1064440:CDS 40.0%
CATTAAATGGATGGCACAGT+TGG - chr7_2:57060715-57060734 None:intergenic 40.0%
TCAATTGTATGAGGCAAACC+AGG - chr7_2:57060792-57060811 None:intergenic 40.0%
GGAGTCATCTCAATTGTATG+AGG - chr7_2:57060801-57060820 None:intergenic 40.0%
TACAATTGAGATGACTCCTC+TGG + chr7_2:57060803-57060822 Msa1064440:CDS 40.0%
CTACAATGGGGATCAAATCT+TGG + chr7_2:57060964-57060983 Msa1064440:CDS 40.0%
TTGTTGATCCAAGCTGAAAC+TGG - chr7_2:57060999-57061018 None:intergenic 40.0%
AGTTTCAGCTTGGATCAACA+AGG + chr7_2:57060998-57061017 Msa1064440:CDS 40.0%
AATGAGAAAAAGGCCAATGG+GGG + chr7_2:57061023-57061042 Msa1064440:CDS 40.0%
AACTTGCGAAAGAGGAAGAA+TGG + chr7_2:57061057-57061076 Msa1064440:CDS 40.0%
AAGAGGAAGAATGGCTAGAT+TGG + chr7_2:57061066-57061085 Msa1064440:CDS 40.0%
!!! TATGTTTTGGCAGCCATACT+AGG + chr7_2:57061123-57061142 Msa1064440:CDS 40.0%
CAACTTGTAGAAATTGCGCA+TGG + chr7_2:57061158-57061177 Msa1064440:CDS 40.0%
TGTTCCAATATCAACAGCTG+TGG - chr7_2:57061320-57061339 None:intergenic 40.0%
GAGAAGGGAAGAGATAGTTA+AGG + chr7_2:57061544-57061563 Msa1064440:CDS 40.0%
ACCAAGAGAGCAAAGAAATG+AGG + chr7_2:57061591-57061610 Msa1064440:CDS 40.0%
TCCTCATTTCTTTGCTCTCT+TGG - chr7_2:57061595-57061614 None:intergenic 40.0%
AGGATGAGAGCAAAGAAACT+TGG + chr7_2:57061611-57061630 Msa1064440:CDS 40.0%
! GTCTTGCTGTGTCAATCATA+GGG - chr7_2:57060332-57060351 None:intergenic 40.0%
! AGTCTTGCTGTGTCAATCAT+AGG - chr7_2:57060333-57060352 None:intergenic 40.0%
GCAAGACTATTTGCAAAGCA+TGG + chr7_2:57060345-57060364 Msa1064440:CDS 40.0%
ATTGGCATGTGTAGTGATGA+TGG - chr7_2:57060382-57060401 None:intergenic 40.0%
ATAGACACTGACATCAGTTC+AGG + chr7_2:57060423-57060442 Msa1064440:CDS 40.0%
! TCGTGTTTTCAATACCGTCA+GGG - chr7_2:57060500-57060519 None:intergenic 40.0%
! TTCGTGTTTTCAATACCGTC+AGG - chr7_2:57060501-57060520 None:intergenic 40.0%
GCCACTTCACTTGAAATTCT+TGG + chr7_2:57060525-57060544 Msa1064440:CDS 40.0%
TCTCTGATATGATGTATCCG+TGG + chr7_2:57060625-57060644 Msa1064440:CDS 40.0%
CATTAAATGGATGGCACAGT+TGG - chr7_2:57060715-57060734 None:intergenic 40.0%
TCAATTGTATGAGGCAAACC+AGG - chr7_2:57060792-57060811 None:intergenic 40.0%
GGAGTCATCTCAATTGTATG+AGG - chr7_2:57060801-57060820 None:intergenic 40.0%
TACAATTGAGATGACTCCTC+TGG + chr7_2:57060803-57060822 Msa1064440:CDS 40.0%
CTACAATGGGGATCAAATCT+TGG + chr7_2:57060964-57060983 Msa1064440:CDS 40.0%
TTGTTGATCCAAGCTGAAAC+TGG - chr7_2:57060999-57061018 None:intergenic 40.0%
AGTTTCAGCTTGGATCAACA+AGG + chr7_2:57060998-57061017 Msa1064440:CDS 40.0%
AATGAGAAAAAGGCCAATGG+GGG + chr7_2:57061023-57061042 Msa1064440:CDS 40.0%
AACTTGCGAAAGAGGAAGAA+TGG + chr7_2:57061057-57061076 Msa1064440:CDS 40.0%
AAGAGGAAGAATGGCTAGAT+TGG + chr7_2:57061066-57061085 Msa1064440:CDS 40.0%
!!! TATGTTTTGGCAGCCATACT+AGG + chr7_2:57061123-57061142 Msa1064440:CDS 40.0%
CAACTTGTAGAAATTGCGCA+TGG + chr7_2:57061158-57061177 Msa1064440:CDS 40.0%
TGTTCCAATATCAACAGCTG+TGG - chr7_2:57061320-57061339 None:intergenic 40.0%
GAGAAGGGAAGAGATAGTTA+AGG + chr7_2:57061544-57061563 Msa1064440:CDS 40.0%
ACCAAGAGAGCAAAGAAATG+AGG + chr7_2:57061591-57061610 Msa1064440:CDS 40.0%
TCCTCATTTCTTTGCTCTCT+TGG - chr7_2:57061595-57061614 None:intergenic 40.0%
AGGATGAGAGCAAAGAAACT+TGG + chr7_2:57061611-57061630 Msa1064440:CDS 40.0%
TTTCTTCCATTTCCCTCAGC+TGG + chr7_2:57060297-57060316 Msa1064440:CDS 45.0%
CTACACATGCCAATGCTTCA+AGG + chr7_2:57060388-57060407 Msa1064440:CDS 45.0%
TCAAGGAGTAAGGATGCTTC+AGG + chr7_2:57060557-57060576 Msa1064440:CDS 45.0%
TATGATGTATCCGTGGACAG+TGG + chr7_2:57060632-57060651 Msa1064440:CDS 45.0%
AACCAATCAGGAACTTCCAG+AGG - chr7_2:57060822-57060841 None:intergenic 45.0%
CATTGGTCCAAAATAGGCAG+CGG - chr7_2:57060862-57060881 None:intergenic 45.0%
GGGATCAAATCTTGGAGTGT+AGG + chr7_2:57060972-57060991 Msa1064440:CDS 45.0%
CATAGAGGAACTTGCGAAAG+AGG + chr7_2:57061049-57061068 Msa1064440:CDS 45.0%
GAGCATGAGGAAACCTAGTA+TGG - chr7_2:57061139-57061158 None:intergenic 45.0%
ATATTGGAACACCCTGCAAC+CGG + chr7_2:57061329-57061348 Msa1064440:CDS 45.0%
ACAATGAGTCACAATCCCTC+CGG - chr7_2:57061351-57061370 None:intergenic 45.0%
GGATTGTGACTCATTGTGGT+TGG + chr7_2:57061354-57061373 Msa1064440:CDS 45.0%
! CTGGTTTGCCAATGATTACG+TGG + chr7_2:57061402-57061421 Msa1064440:CDS 45.0%
TTTGCCAATGATTACGTGGC+CGG + chr7_2:57061406-57061425 Msa1064440:CDS 45.0%
TTGAAGATAGGGATCCCTGT+AGG + chr7_2:57061473-57061492 Msa1064440:CDS 45.0%
ATGCAGAGAAAGTGGTGAGA+AGG + chr7_2:57061528-57061547 Msa1064440:CDS 45.0%
TGCAGAGAAAGTGGTGAGAA+GGG + chr7_2:57061529-57061548 Msa1064440:CDS 45.0%
ACCTTCCTCTATAGTCCTCT+TGG - chr7_2:57061645-57061664 None:intergenic 45.0%
AAGAGGACTATAGAGGAAGG+TGG + chr7_2:57061644-57061663 Msa1064440:CDS 45.0%
TTTCTTCCATTTCCCTCAGC+TGG + chr7_2:57060297-57060316 Msa1064440:CDS 45.0%
CTACACATGCCAATGCTTCA+AGG + chr7_2:57060388-57060407 Msa1064440:CDS 45.0%
TCAAGGAGTAAGGATGCTTC+AGG + chr7_2:57060557-57060576 Msa1064440:CDS 45.0%
TATGATGTATCCGTGGACAG+TGG + chr7_2:57060632-57060651 Msa1064440:CDS 45.0%
AACCAATCAGGAACTTCCAG+AGG - chr7_2:57060822-57060841 None:intergenic 45.0%
CATTGGTCCAAAATAGGCAG+CGG - chr7_2:57060862-57060881 None:intergenic 45.0%
GGGATCAAATCTTGGAGTGT+AGG + chr7_2:57060972-57060991 Msa1064440:CDS 45.0%
CATAGAGGAACTTGCGAAAG+AGG + chr7_2:57061049-57061068 Msa1064440:CDS 45.0%
GAGCATGAGGAAACCTAGTA+TGG - chr7_2:57061139-57061158 None:intergenic 45.0%
ATATTGGAACACCCTGCAAC+CGG + chr7_2:57061329-57061348 Msa1064440:CDS 45.0%
ACAATGAGTCACAATCCCTC+CGG - chr7_2:57061351-57061370 None:intergenic 45.0%
GGATTGTGACTCATTGTGGT+TGG + chr7_2:57061354-57061373 Msa1064440:CDS 45.0%
! CTGGTTTGCCAATGATTACG+TGG + chr7_2:57061402-57061421 Msa1064440:CDS 45.0%
TTTGCCAATGATTACGTGGC+CGG + chr7_2:57061406-57061425 Msa1064440:CDS 45.0%
TTGAAGATAGGGATCCCTGT+AGG + chr7_2:57061473-57061492 Msa1064440:CDS 45.0%
ATGCAGAGAAAGTGGTGAGA+AGG + chr7_2:57061528-57061547 Msa1064440:CDS 45.0%
TGCAGAGAAAGTGGTGAGAA+GGG + chr7_2:57061529-57061548 Msa1064440:CDS 45.0%
ACCTTCCTCTATAGTCCTCT+TGG - chr7_2:57061645-57061664 None:intergenic 45.0%
AAGAGGACTATAGAGGAAGG+TGG + chr7_2:57061644-57061663 Msa1064440:CDS 45.0%
ATATGGCCAGCTGAGGGAAA+TGG - chr7_2:57060306-57060325 None:intergenic 50.0%
CAGTTCCCTTCAGCTCAAGT+TGG + chr7_2:57060471-57060490 Msa1064440:CDS 50.0%
GGAGACCAACTTGAGCTGAA+GGG - chr7_2:57060479-57060498 None:intergenic 50.0%
GTGGAAGCAGCTGCAAAACT+AGG + chr7_2:57060651-57060670 Msa1064440:CDS 50.0%
GGATGGCACAGTTGGAGAAT+TGG - chr7_2:57060707-57060726 None:intergenic 50.0%
! CTCCTCTGGAAGTTCCTGAT+TGG + chr7_2:57060817-57060836 Msa1064440:CDS 50.0%
! AATCCTGCCGCTGCCTATTT+TGG + chr7_2:57060852-57060871 Msa1064440:CDS 50.0%
GTGTAGGACCAGTTTCAGCT+TGG + chr7_2:57060988-57061007 Msa1064440:CDS 50.0%
TTCCTCTATGTGTCCCCCAT+TGG - chr7_2:57061039-57061058 None:intergenic 50.0%
GCGCATGGGCTTGAAAAATC+AGG + chr7_2:57061173-57061192 Msa1064440:CDS 50.0%
GGCACCACAGCTGTTGATAT+TGG + chr7_2:57061313-57061332 Msa1064440:CDS 50.0%
GGAGGGATTGTGACTCATTG+TGG + chr7_2:57061350-57061369 Msa1064440:CDS 50.0%
AACACCGGCCACGTAATCAT+TGG - chr7_2:57061413-57061432 None:intergenic 50.0%
!! AACTTGGTGATGCTGCCAAG+AGG + chr7_2:57061627-57061646 Msa1064440:CDS 50.0%
TGCTGCCAAGAGGACTATAG+AGG + chr7_2:57061637-57061656 Msa1064440:CDS 50.0%
GCCAAGAGGACTATAGAGGA+AGG + chr7_2:57061641-57061660 Msa1064440:CDS 50.0%
ATATGGCCAGCTGAGGGAAA+TGG - chr7_2:57060306-57060325 None:intergenic 50.0%
CAGTTCCCTTCAGCTCAAGT+TGG + chr7_2:57060471-57060490 Msa1064440:CDS 50.0%
GGAGACCAACTTGAGCTGAA+GGG - chr7_2:57060479-57060498 None:intergenic 50.0%
GTGGAAGCAGCTGCAAAACT+AGG + chr7_2:57060651-57060670 Msa1064440:CDS 50.0%
GGATGGCACAGTTGGAGAAT+TGG - chr7_2:57060707-57060726 None:intergenic 50.0%
! CTCCTCTGGAAGTTCCTGAT+TGG + chr7_2:57060817-57060836 Msa1064440:CDS 50.0%
! AATCCTGCCGCTGCCTATTT+TGG + chr7_2:57060852-57060871 Msa1064440:CDS 50.0%
GTGTAGGACCAGTTTCAGCT+TGG + chr7_2:57060988-57061007 Msa1064440:CDS 50.0%
TTCCTCTATGTGTCCCCCAT+TGG - chr7_2:57061039-57061058 None:intergenic 50.0%
GCGCATGGGCTTGAAAAATC+AGG + chr7_2:57061173-57061192 Msa1064440:CDS 50.0%
GGCACCACAGCTGTTGATAT+TGG + chr7_2:57061313-57061332 Msa1064440:CDS 50.0%
GGAGGGATTGTGACTCATTG+TGG + chr7_2:57061350-57061369 Msa1064440:CDS 50.0%
AACACCGGCCACGTAATCAT+TGG - chr7_2:57061413-57061432 None:intergenic 50.0%
!! AACTTGGTGATGCTGCCAAG+AGG + chr7_2:57061627-57061646 Msa1064440:CDS 50.0%
TGCTGCCAAGAGGACTATAG+AGG + chr7_2:57061637-57061656 Msa1064440:CDS 50.0%
GCCAAGAGGACTATAGAGGA+AGG + chr7_2:57061641-57061660 Msa1064440:CDS 50.0%
GGGTTCATATGGCCAGCTGA+GGG - chr7_2:57060312-57060331 None:intergenic 55.0%
AGGGTTCATATGGCCAGCTG+AGG - chr7_2:57060313-57060332 None:intergenic 55.0%
GGGAGACCAACTTGAGCTGA+AGG - chr7_2:57060480-57060499 None:intergenic 55.0%
!! GCTCAAGTTGGTCTCCCTGA+CGG + chr7_2:57060483-57060502 Msa1064440:CDS 55.0%
TCACAATCCCTCCGGTTGCA+GGG - chr7_2:57061343-57061362 None:intergenic 55.0%
GGGTTCATATGGCCAGCTGA+GGG - chr7_2:57060312-57060331 None:intergenic 55.0%
AGGGTTCATATGGCCAGCTG+AGG - chr7_2:57060313-57060332 None:intergenic 55.0%
GGGAGACCAACTTGAGCTGA+AGG - chr7_2:57060480-57060499 None:intergenic 55.0%
!! GCTCAAGTTGGTCTCCCTGA+CGG + chr7_2:57060483-57060502 Msa1064440:CDS 55.0%
TCACAATCCCTCCGGTTGCA+GGG - chr7_2:57061343-57061362 None:intergenic 55.0%
GCAGCTGCTTCCACTGTCCA+CGG - chr7_2:57060645-57060664 None:intergenic 60.0%
GGTCCAAAATAGGCAGCGGC+AGG - chr7_2:57060858-57060877 None:intergenic 60.0%
GGCCAATGGGGGACACATAG+AGG + chr7_2:57061034-57061053 Msa1064440:CDS 60.0%
TTGGAACACCCTGCAACCGG+AGG + chr7_2:57061332-57061351 Msa1064440:CDS 60.0%
TGGAACACCCTGCAACCGGA+GGG + chr7_2:57061333-57061352 Msa1064440:CDS 60.0%
GTCACAATCCCTCCGGTTGC+AGG - chr7_2:57061344-57061363 None:intergenic 60.0%
GCAGCTGCTTCCACTGTCCA+CGG - chr7_2:57060645-57060664 None:intergenic 60.0%
GGTCCAAAATAGGCAGCGGC+AGG - chr7_2:57060858-57060877 None:intergenic 60.0%
GGCCAATGGGGGACACATAG+AGG + chr7_2:57061034-57061053 Msa1064440:CDS 60.0%
TTGGAACACCCTGCAACCGG+AGG + chr7_2:57061332-57061351 Msa1064440:CDS 60.0%
TGGAACACCCTGCAACCGGA+GGG + chr7_2:57061333-57061352 Msa1064440:CDS 60.0%
GTCACAATCCCTCCGGTTGC+AGG - chr7_2:57061344-57061363 None:intergenic 60.0%
Chromosome Type Strat End Strand Name
chr7_2 gene 57060258 57061751 57060258 ID=Msa1064440;Name=Msa1064440
chr7_2 mRNA 57060258 57061751 57060258 ID=Msa1064440-mRNA-1;Parent=Msa1064440;Name=Msa1064440-mRNA-1;_AED=0.23;_eAED=0.23;_QI=0|-1|0|1|-1|1|1|0|497
chr7_2 exon 57060258 57061751 57060258 ID=Msa1064440-mRNA-1:exon:10828;Parent=Msa1064440-mRNA-1
chr7_2 CDS 57060258 57061751 57060258 ID=Msa1064440-mRNA-1:cds;Parent=Msa1064440-mRNA-1
Gene Sequence

>Msa1064440

ATGGAGTCTCAACAATCCCATAACCAACTTCATGTTGTTTTTCTTCCATTTCCCTCAGCTGGCCATATGAACCCTATGATTGACACAGCAAGACTATTTGCAAAGCATGGTGTTAATGTTACCATCATCACTACACATGCCAATGCTTCAAGGTTCCAAAAATCAATAGACACTGACATCAGTTCAGGATACTCCATCAAAACTCAACTTATTCAGTTCCCTTCAGCTCAAGTTGGTCTCCCTGACGGTATTGAAAACACGAACGATGCCACTTCACTTGAAATTCTTGGTAAAATCATTCAAGGAGTAAGGATGCTTCAGGAATCTATTGAAGTTCTGTTAAAAGAAGTTCAACCAGATTGCATAGTCTCTGATATGATGTATCCGTGGACAGTGGAAGCAGCTGCAAAACTAGGTATTCCAAGAATTCATTATTACATCACAAGCCAATTCTCCAACTGTGCCATCCATTTAATGATGAAGTATAGACCTCATGATAATTTAGTTTCTGATACACAGAAATTTACAATTCCTGGTTTGCCTCATACAATTGAGATGACTCCTCTGGAAGTTCCTGATTGGTTACATGCAAAGAATCCTGCCGCTGCCTATTTTGGACCAATGCATGAATCAGAGAAAAGAAGTTATGGAACACTATACAACAGTTTTCATGAACTGGAAAGTGATTATGAAAAACTTAGTAAGACTACAATGGGGATCAAATCTTGGAGTGTAGGACCAGTTTCAGCTTGGATCAACAAGGTTAATGAGAAAAAGGCCAATGGGGGACACATAGAGGAACTTGCGAAAGAGGAAGAATGGCTAGATTGGCTTAACTCAAAGCAAAATGAGTCTGTATTGTATGTATGTTTTGGCAGCCATACTAGGTTTCCTCATGCTCAACTTGTAGAAATTGCGCATGGGCTTGAAAAATCAGGTCAAAATTTTATCTGGGTTGTAAAAAAAAATGATAAAGATGAAGATGGAGATGGTTTCCTGCAAGAATTTGAGAAAAGGATGAAAGAAAGCAAAAAGGGCTATATCATATGGAATTGGGCACCACAGCTGTTGATATTGGAACACCCTGCAACCGGAGGGATTGTGACTCATTGTGGTTGGAACTCAACTATTGAAAGCATAAATGCTGGTTTGCCAATGATTACGTGGCCGGTGTTTGCTGACCAATTTTACAATGAGAAGTTGCTTGTTGATGTTTTGAAGATAGGGATCCCTGTAGGAGCAAAAGAACATAATTTATGGGCTAACATTAATGCAGAGAAAGTGGTGAGAAGGGAAGAGATAGTTAAGGCTGTGAAGATTTTGATGGGAAGTGACCAAGAGAGCAAAGAAATGAGGATGAGAGCAAAGAAACTTGGTGATGCTGCCAAGAGGACTATAGAGGAAGGTGGTGATTCTTACAACAACTTGATTCAGTTGATTGATGAGCTGAAATCATTGAAGAAATCTAAGGCACTTGGTGAGAAATCAGATTAG

Protein sequence

>Msa1064440

MESQQSHNQLHVVFLPFPSAGHMNPMIDTARLFAKHGVNVTIITTHANASRFQKSIDTDISSGYSIKTQLIQFPSAQVGLPDGIENTNDATSLEILGKIIQGVRMLQESIEVLLKEVQPDCIVSDMMYPWTVEAAAKLGIPRIHYYITSQFSNCAIHLMMKYRPHDNLVSDTQKFTIPGLPHTIEMTPLEVPDWLHAKNPAAAYFGPMHESEKRSYGTLYNSFHELESDYEKLSKTTMGIKSWSVGPVSAWINKVNEKKANGGHIEELAKEEEWLDWLNSKQNESVLYVCFGSHTRFPHAQLVEIAHGLEKSGQNFIWVVKKNDKDEDGDGFLQEFEKRMKESKKGYIIWNWAPQLLILEHPATGGIVTHCGWNSTIESINAGLPMITWPVFADQFYNEKLLVDVLKIGIPVGAKEHNLWANINAEKVVRREEIVKAVKILMGSDQESKEMRMRAKKLGDAAKRTIEEGGDSYNNLIQLIDELKSLKKSKALGEKSD*