AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa1025630


Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa1025630 MtrunA17_Chr7g0243931 78.112 498 108 1 1 497 7 504 0.0 811
Msa1025630 MtrunA17_Chr7g0243681 77.621 496 105 2 1 495 1 491 0.0 808
Msa1025630 MtrunA17_Chr7g0243861 79.477 497 101 1 2 497 5 501 0.0 808
Msa1025630 MtrunA17_Chr7g0243951 78.313 498 106 2 1 497 1 497 0.0 806
Msa1025630 MtrunA17_Chr7g0243631 76.400 500 115 2 1 497 1 500 0.0 795
Msa1025630 MtrunA17_Chr4g0060511 74.651 501 123 2 1 497 1 501 0.0 774
Msa1025630 MtrunA17_Chr7g0243771 73.868 486 122 2 8 492 3 484 0.0 759
Msa1025630 MtrunA17_Chr7g0243801 73.225 493 123 3 1 492 1 485 0.0 755
Msa1025630 MtrunA17_Chr7g0243761 72.837 497 106 1 1 497 1 468 0.0 723
Msa1025630 MtrunA17_Chr7g0235051 73.441 497 102 1 1 497 1 467 0.0 723
Msa1025630 MtrunA17_Chr7g0243851 70.884 498 102 2 1 497 1 456 0.0 720
Msa1025630 MtrunA17_Chr7g0243781 65.795 497 158 3 1 495 1 487 0.0 669
Msa1025630 MtrunA17_Chr7g0243871 65.714 490 157 3 1 490 1 479 0.0 666
Msa1025630 MtrunA17_Chr5g0401851 53.374 489 225 2 5 491 4 491 0.0 538
Msa1025630 MtrunA17_Chr8g0355221 54.004 487 221 3 5 490 9 493 0.0 527
Msa1025630 MtrunA17_Chr7g0243811 62.750 400 136 2 23 422 1 387 3.00e-180 511
Msa1025630 MtrunA17_Chr1g0165701 52.342 491 230 4 5 495 9 495 1.10e-177 508
Msa1025630 MtrunA17_Chr5g0416741 52.905 482 221 5 8 487 10 487 5.47e-174 499
Msa1025630 MtrunA17_Chr6g0463891 51.129 487 234 4 9 493 10 494 1.17e-170 490
Msa1025630 MtrunA17_Chr7g0243611 72.903 310 70 1 126 435 1 296 4.33e-168 476
Msa1025630 MtrunA17_Chr7g0243711 87.109 256 33 0 242 497 75 330 1.47e-162 463
Msa1025630 MtrunA17_Chr7g0243711 86.076 79 11 0 1 79 1 79 2.89e-39 145
Msa1025630 MtrunA17_Chr5g0416821 48.485 495 234 5 5 493 4 483 4.35e-159 460
Msa1025630 MtrunA17_Chr4g0044501 45.621 491 249 9 1 486 1 478 1.45e-141 416
Msa1025630 MtrunA17_Chr8g0366391 45.214 491 253 7 1 486 1 480 7.13e-139 409
Msa1025630 MtrunA17_Chr4g0044511 42.116 482 265 8 7 485 36 506 1.00e-131 391
Msa1025630 MtrunA17_Chr4g0044521 43.451 481 253 7 8 486 6 469 1.71e-124 371
Msa1025630 MtrunA17_Chr4g0066261 40.873 504 272 10 1 492 1 490 1.58e-122 367
Msa1025630 MtrunA17_Chr4g0066151 42.363 491 252 8 10 490 17 486 3.04e-120 361
Msa1025630 MtrunA17_Chr4g0066221 40.434 507 269 10 1 492 1 489 4.24e-119 358
Msa1025630 MtrunA17_Chr4g0014061 39.337 483 284 3 10 492 8 481 1.47e-118 357
Msa1025630 MtrunA17_Chr4g0066201 41.582 493 250 11 10 491 17 482 7.79e-117 352
Msa1025630 MtrunA17_Chr4g0066281 41.942 484 253 9 14 492 15 475 8.16e-117 352
Msa1025630 MtrunA17_Chr7g0275681 40.249 482 266 9 11 483 12 480 7.02e-116 350
Msa1025630 MtrunA17_Chr4g0066171 40.606 495 253 11 10 492 20 485 5.80e-115 347
Msa1025630 MtrunA17_Chr7g0243921 75.000 212 48 1 2 213 31 237 7.57e-114 336
Msa1025630 MtrunA17_Chr4g0066131 40.891 494 259 9 10 492 12 483 1.18e-112 342
Msa1025630 MtrunA17_Chr8g0350881 40.816 490 272 7 10 492 11 489 2.53e-112 341
Msa1025630 MtrunA17_Chr8g0374901 40.530 491 270 8 9 492 12 487 1.07e-111 339
Msa1025630 MtrunA17_Chr4g0011051 37.988 487 292 7 9 487 7 491 1.84e-110 336
Msa1025630 MtrunA17_Chr8g0374971 39.592 490 278 5 10 492 11 489 3.01e-110 335
Msa1025630 MtrunA17_Chr5g0419771 39.078 499 274 9 6 487 31 516 1.46e-109 335
Msa1025630 MtrunA17_Chr7g0265041 39.718 496 278 12 1 483 1 488 2.05e-109 334
Msa1025630 MtrunA17_Chr5g0419761 40.408 490 277 10 10 488 8 493 1.10e-108 332
Msa1025630 MtrunA17_Chr7g0218311 40.644 497 262 11 10 492 15 492 3.46e-108 330
Msa1025630 MtrunA17_Chr7g0265141 39.880 499 268 13 1 482 1 484 8.16e-108 329
Msa1025630 MtrunA17_Chr2g0294931 40.313 511 265 11 1 492 1 490 2.77e-107 328
Msa1025630 MtrunA17_Chr4g0044481 43.943 421 198 8 11 428 27 412 2.14e-106 323
Msa1025630 MtrunA17_Chr7g0265151 38.076 499 277 13 1 483 1 483 3.44e-106 325
Msa1025630 MtrunA17_Chr1g0179901 36.614 508 290 11 1 490 7 500 4.71e-106 325
Msa1025630 MtrunA17_Chr6g0463851 39.448 507 260 12 1 484 1 483 6.43e-106 325
Msa1025630 MtrunA17_Chr8g0374941 41.309 489 267 8 9 490 949 1424 7.44e-106 344
Msa1025630 MtrunA17_Chr8g0374941 40.167 478 264 9 1 469 1 465 1.96e-97 321
Msa1025630 MtrunA17_Chr8g0374941 40.506 474 260 7 1 465 466 926 5.22e-96 317
Msa1025630 MtrunA17_Chr6g0463861 38.889 504 264 14 1 487 1 477 9.69e-106 324
Msa1025630 MtrunA17_Chr8g0374931 39.173 508 271 10 1 490 1 488 6.06e-105 322
Msa1025630 MtrunA17_Chr7g0243911 73.632 201 53 0 268 468 15 215 9.32e-105 312
Msa1025630 MtrunA17_Chr7g0265101 36.492 496 294 8 9 492 7 493 1.90e-104 321
Msa1025630 MtrunA17_Chr7g0265051 37.400 500 282 12 9 492 7 491 1.54e-103 319
Msa1025630 MtrunA17_Chr5g0428081 38.356 511 269 11 1 490 1 486 4.61e-103 317
Msa1025630 MtrunA17_Chr5g0410941 38.264 507 273 10 1 490 13 496 2.83e-101 313
Msa1025630 MtrunA17_Chr7g0265111 36.832 505 295 10 3 493 31 525 6.44e-101 313
Msa1025630 MtrunA17_Chr2g0294921 38.986 513 265 11 1 490 150 637 4.58e-100 314
Msa1025630 MtrunA17_Chr7g0231631 52.190 274 111 6 216 487 8 263 4.31e-81 253
Msa1025630 MtrunA17_Chr2g0294941 39.623 371 190 10 115 468 11 364 6.96e-72 233
Msa1025630 MtrunA17_Chr5g0440421 28.063 506 328 11 3 486 2 493 9.51e-64 215
Msa1025630 MtrunA17_Chr8g0361411 31.452 496 279 13 9 487 6 457 3.08e-61 207
Msa1025630 MtrunA17_Chr6g0454341 29.518 498 296 17 11 483 10 477 1.03e-58 201
Msa1025630 MtrunA17_Chr3g0078841 29.960 504 286 17 11 483 10 477 2.24e-58 200
Msa1025630 MtrunA17_Chr1g0207971 27.976 504 296 19 6 489 3 459 2.21e-57 197
Msa1025630 MtrunA17_Chr7g0243721 69.286 140 43 0 186 325 1 140 2.28e-57 187
Msa1025630 MtrunA17_Chr6g0454261 29.000 500 313 13 11 491 10 486 4.55e-57 197
Msa1025630 MtrunA17_Chr6g0464881 28.024 496 312 15 1 488 1 459 6.29e-57 196
Msa1025630 MtrunA17_Chr6g0464861 29.541 501 287 20 1 483 1 453 9.17e-57 195
Msa1025630 MtrunA17_Chr2g0329111 28.247 485 289 15 12 469 7 459 1.87e-56 195
Msa1025630 MtrunA17_Chr6g0464841 29.518 498 292 19 1 483 1 454 3.14e-56 194
Msa1025630 MtrunA17_Chr2g0278711 28.400 500 305 14 11 487 11 480 1.08e-55 193
Msa1025630 MtrunA17_Chr2g0307961 31.006 487 291 14 11 483 13 468 2.77e-55 192
Msa1025630 MtrunA17_Chr8g0336331 28.657 499 298 13 11 483 10 476 4.72e-55 191
Msa1025630 MtrunA17_Chr6g0464871 27.733 494 306 15 1 483 13 466 5.77e-55 191
Msa1025630 MtrunA17_Chr6g0454321 28.803 493 296 17 11 478 10 472 8.49e-55 194
Msa1025630 MtrunA17_Chr7g0217881 29.652 489 291 18 11 483 10 461 1.09e-54 190
Msa1025630 MtrunA17_Chr6g0454331 28.854 506 303 15 6 483 2 478 1.14e-54 190
Msa1025630 MtrunA17_Chr3g0098111 27.711 498 312 14 6 485 4 471 2.28e-54 189
Msa1025630 MtrunA17_Chr7g0250001 28.803 493 286 20 8 483 3 447 3.13e-54 189
Msa1025630 MtrunA17_Chr7g0231651 48.469 196 96 2 5 195 4 199 7.41e-54 180
Msa1025630 MtrunA17_Chr6g0464921 28.571 497 299 15 1 483 1 455 9.01e-54 187
Msa1025630 MtrunA17_Chr6g0454191 28.261 506 311 14 3 483 2 480 9.99e-54 188
Msa1025630 MtrunA17_Chr6g0454141 28.088 502 300 17 11 483 10 479 1.73e-53 187
Msa1025630 MtrunA17_Chr6g0454361 29.528 508 285 16 11 483 11 480 3.52e-53 186
Msa1025630 MtrunA17_Chr5g0426431 30.000 500 299 15 6 483 7 477 3.79e-53 186
Msa1025630 MtrunA17_Chr6g0454301 28.429 503 295 14 11 483 263 730 4.68e-53 191
Msa1025630 MtrunA17_Chr6g0454301 34.583 240 140 4 243 482 6 228 1.79e-33 134
Msa1025630 MtrunA17_Chr6g0454151 27.856 499 303 14 11 483 10 477 5.66e-53 186
Msa1025630 MtrunA17_Chr1g0161351 27.593 511 309 17 1 487 28 501 7.21e-53 186
Msa1025630 MtrunA17_Chr6g0454291 28.713 505 303 15 6 483 2 476 8.56e-53 185
Msa1025630 MtrunA17_Chr7g0249931 28.427 496 290 19 6 483 35 483 1.11e-52 185
Msa1025630 MtrunA17_Chr6g0454401 27.984 511 306 16 3 483 2 480 1.46e-52 185
Msa1025630 MtrunA17_Chr8g0377921 27.959 490 300 13 12 481 5 461 2.01e-52 184
Msa1025630 MtrunA17_Chr5g0448521 28.138 494 303 13 9 481 3 465 2.50e-52 184
Msa1025630 MtrunA17_Chr8g0380531 30.339 501 284 19 4 484 3 458 6.87e-52 182
Msa1025630 MtrunA17_Chr6g0453951 28.370 497 305 16 11 483 57 526 1.52e-51 183
Msa1025630 MtrunA17_Chr1g0207981 28.889 495 313 14 2 483 4 472 1.81e-51 182
Msa1025630 MtrunA17_Chr6g0462551 32.041 490 281 17 12 481 5 462 4.15e-51 181
Msa1025630 MtrunA17_Chr8g0357361 47.291 203 100 4 214 416 60 255 4.31e-51 175
Msa1025630 MtrunA17_Chr6g0454181 28.032 503 315 17 3 483 2 479 9.92e-51 180
Msa1025630 MtrunA17_Chr3g0112771 29.389 507 294 17 1 491 1 459 1.26e-50 179
Msa1025630 MtrunA17_Chr4g0050341 29.637 496 304 14 11 484 19 491 2.88e-50 179
Msa1025630 MtrunA17_Chr5g0414331 28.056 499 295 19 1 483 3 453 3.90e-50 178
Msa1025630 MtrunA17_Chr6g0454201 28.429 503 297 14 11 483 11 480 5.50e-50 178
Msa1025630 MtrunA17_Chr8g0359821 28.337 487 316 12 11 483 10 477 5.51e-50 178
Msa1025630 MtrunA17_Chr3g0092641 28.600 500 306 15 6 483 7 477 8.88e-50 177
Msa1025630 MtrunA17_Chr4g0053501 28.516 512 315 15 1 496 1 477 1.34e-49 177
Msa1025630 MtrunA17_Chr1g0173121 29.675 492 272 17 6 472 9 451 1.79e-49 176
Msa1025630 MtrunA17_Chr3g0118711 27.647 510 312 16 1 483 1 480 1.96e-49 176
Msa1025630 MtrunA17_Chr1g0159551 30.165 484 277 14 6 472 9 448 2.81e-49 175
Msa1025630 MtrunA17_Chr5g0420801 28.916 498 299 19 6 486 2 461 3.27e-49 175
Msa1025630 MtrunA17_Chr3g0118691 29.283 502 292 19 11 483 15 482 4.80e-49 175
Msa1025630 MtrunA17_Chr1g0207861 27.545 501 309 18 6 485 3 470 5.24e-49 175
Msa1025630 MtrunA17_Chr7g0249981 27.218 496 304 17 1 483 15 466 6.36e-49 175
Msa1025630 MtrunA17_Chr3g0121991 27.309 498 316 16 11 488 79 550 7.39e-49 176
Msa1025630 MtrunA17_Chr3g0118671 28.112 498 307 14 9 483 4 473 1.06e-48 174
Msa1025630 MtrunA17_Chr8g0347281 29.218 486 290 15 12 479 19 468 1.96e-48 173
Msa1025630 MtrunA17_Chr5g0414321 28.373 504 297 20 1 488 1 456 2.49e-48 173
Msa1025630 MtrunA17_Chr8g0339451 31.529 425 215 15 93 479 73 459 3.41e-48 172
Msa1025630 MtrunA17_Chr6g0453961 27.756 508 295 16 11 483 19 489 4.18e-48 173
Msa1025630 MtrunA17_Chr7g0232411 37.456 283 143 8 217 486 207 468 6.35e-48 172
Msa1025630 MtrunA17_Chr6g0454121 27.096 513 290 15 11 483 10 478 6.97e-48 172
Msa1025630 MtrunA17_Chr7g0218821 28.926 484 291 13 11 481 5 448 7.68e-48 171
Msa1025630 MtrunA17_Chr6g0454131 26.946 501 322 12 3 483 2 478 1.46e-47 171
Msa1025630 MtrunA17_Chr7g0218841 29.106 481 281 15 11 480 6 437 1.82e-47 170
Msa1025630 MtrunA17_Chr7g0232391 28.543 501 289 18 10 482 5 464 2.19e-47 171
Msa1025630 MtrunA17_Chr3g0118701 27.108 498 308 16 11 483 15 482 2.85e-47 171
Msa1025630 MtrunA17_Chr7g0218831 28.542 480 284 15 11 480 6 436 5.03e-47 169
Msa1025630 MtrunA17_Chr3g0118771 27.968 497 305 14 11 483 21 488 9.06e-47 169
Msa1025630 MtrunA17_Chr7g0275511 30.382 497 276 19 12 479 16 471 9.29e-47 169
Msa1025630 MtrunA17_Chr8g0347271 29.960 494 276 20 12 479 20 469 1.11e-46 169
Msa1025630 MtrunA17_Chr1g0207951 27.992 493 293 19 10 484 123 571 1.21e-46 174
Msa1025630 MtrunA17_Chr1g0207951 28.041 485 307 17 10 483 655 1108 8.29e-46 172
Msa1025630 MtrunA17_Chr6g0454211 27.183 504 318 14 3 483 289 766 1.41e-46 173
Msa1025630 MtrunA17_Chr6g0454211 24.444 270 158 6 129 387 2 236 1.75e-19 92.0
Msa1025630 MtrunA17_Chr8g0369341 28.770 504 302 17 6 486 2 471 1.55e-46 168
Msa1025630 MtrunA17_Chr5g0442541 26.923 494 303 17 11 481 5 463 2.96e-46 167
Msa1025630 MtrunA17_Chr8g0339601 33.051 354 170 12 155 479 11 326 3.89e-46 164
Msa1025630 MtrunA17_Chr8g0370941 28.185 518 276 19 11 476 8 481 4.79e-46 167
Msa1025630 MtrunA17_Chr6g0454351 28.827 503 278 21 11 483 12 464 6.22e-46 166
Msa1025630 MtrunA17_Chr8g0382021 27.755 490 286 19 16 480 39 485 6.50e-46 167
Msa1025630 MtrunA17_Chr8g0365811 25.800 500 331 12 1 485 485 959 8.86e-46 171
Msa1025630 MtrunA17_Chr8g0365811 27.155 464 271 18 6 438 4 431 2.02e-41 159
Msa1025630 MtrunA17_Chr3g0112761 27.755 490 295 13 11 486 8 452 1.06e-45 166
Msa1025630 MtrunA17_Chr5g0442521 28.834 489 308 15 12 481 6 473 1.11e-45 166
Msa1025630 MtrunA17_Chr7g0218791 28.454 485 291 15 11 482 5 446 1.23e-45 165
Msa1025630 MtrunA17_Chr3g0122001 27.655 499 303 17 11 483 486 952 1.33e-45 171
Msa1025630 MtrunA17_Chr3g0122001 26.347 501 320 15 11 489 6 479 6.99e-44 166
Msa1025630 MtrunA17_Chr4g0053321 28.138 494 296 15 21 492 36 492 1.45e-45 166
Msa1025630 MtrunA17_Chr7g0218811 28.125 480 289 15 11 481 15 447 2.26e-45 164
Msa1025630 MtrunA17_Chr6g0459311 27.551 490 297 15 12 479 14 467 9.52e-45 163
Msa1025630 MtrunA17_Chr5g0423981 27.328 494 279 16 11 483 10 444 1.07e-44 162
Msa1025630 MtrunA17_Chr1g0207831 26.061 495 313 19 8 484 5 464 1.17e-44 163
Msa1025630 MtrunA17_Chr6g0452771 27.092 502 305 15 11 483 10 479 1.43e-44 163
Msa1025630 MtrunA17_Chr1g0207931 26.113 494 270 14 5 484 86 498 1.87e-44 163
Msa1025630 MtrunA17_Chr6g0449931 29.000 500 296 18 11 486 6 470 2.60e-44 162
Msa1025630 MtrunA17_Chr8g0335161 27.033 492 301 15 11 479 6 462 2.75e-44 162
Msa1025630 MtrunA17_Chr8g0339461 35.762 302 149 11 192 472 183 460 3.59e-44 162
Msa1025630 MtrunA17_Chr8g0377941 27.677 495 306 17 6 483 2 461 3.74e-44 162
Msa1025630 MtrunA17_Chr3g0079731 26.733 505 300 17 12 480 7 477 6.89e-44 161
Msa1025630 MtrunA17_Chr8g0361371 26.824 507 304 15 1 480 1 467 7.03e-44 161
Msa1025630 MtrunA17_Chr8g0335141 26.800 500 303 17 12 486 10 471 1.78e-43 160
Msa1025630 MtrunA17_Chr4g0066141 47.399 173 90 1 321 492 188 360 2.43e-43 157
Msa1025630 MtrunA17_Chr4g0066141 36.181 199 107 5 39 235 8 188 1.60e-25 107
Msa1025630 MtrunA17_Chr3g0118661 27.400 500 301 16 11 482 13 478 3.10e-43 159
Msa1025630 MtrunA17_Chr6g0486251 27.328 494 301 16 8 479 3 460 3.67e-43 159
Msa1025630 MtrunA17_Chr6g0486201 27.328 494 301 16 8 479 3 460 3.67e-43 159
Msa1025630 MtrunA17_Chr8g0336691 28.685 502 298 16 10 487 12 477 8.37e-43 163
Msa1025630 MtrunA17_Chr8g0336691 37.681 276 139 8 217 479 1120 1375 2.12e-41 159
Msa1025630 MtrunA17_Chr8g0336691 35.862 290 145 8 201 487 665 916 4.16e-37 146
Msa1025630 MtrunA17_Chr5g0442561 26.273 491 315 16 12 481 6 470 9.20e-43 158
Msa1025630 MtrunA17_Chr8g0336651 37.288 295 142 8 204 479 969 1239 1.05e-42 162
Msa1025630 MtrunA17_Chr8g0336651 36.996 273 129 6 217 487 547 778 1.10e-41 159
Msa1025630 MtrunA17_Chr8g0336651 34.420 276 146 8 217 479 207 460 4.74e-36 142
Msa1025630 MtrunA17_Chr5g0412101 26.984 504 317 16 1 485 1 472 1.19e-42 157
Msa1025630 MtrunA17_Chr7g0232341 35.315 286 150 8 217 488 207 471 1.69e-42 157
Msa1025630 MtrunA17_Chr5g0431361 26.423 492 313 13 3 485 4 455 1.72e-42 157
Msa1025630 MtrunA17_Chr5g0442601 28.427 496 302 20 12 481 405 873 2.01e-42 161
Msa1025630 MtrunA17_Chr5g0442601 28.525 305 168 12 121 410 64 333 5.59e-25 108
Msa1025630 MtrunA17_Chr6g0462531 29.234 496 286 20 12 479 5 463 2.39e-42 157
Msa1025630 MtrunA17_Chr8g0339631 29.577 426 235 15 93 487 81 472 2.89e-42 157
Msa1025630 MtrunA17_Chr5g0442581 27.711 498 303 20 12 481 6 474 3.29e-42 157
Msa1025630 MtrunA17_Chr6g0462571 28.571 490 295 15 12 481 5 459 4.08e-42 156
Msa1025630 MtrunA17_Chr6g0454271 33.893 298 174 8 190 483 8 286 6.51e-42 151
Msa1025630 MtrunA17_Chr7g0243731 81.250 80 15 0 340 419 1 80 9.17e-42 144
Msa1025630 MtrunA17_Chr6g0454251 27.431 401 256 12 11 388 7 395 2.40e-41 152
Msa1025630 MtrunA17_Chr6g0462521 29.939 491 275 20 12 479 5 449 2.94e-41 154
Msa1025630 MtrunA17_Chr5g0393591 26.181 508 275 17 11 496 17 446 3.28e-41 153
Msa1025630 MtrunA17_Chr5g0412131 26.735 490 314 14 11 485 12 471 3.83e-41 153
Msa1025630 MtrunA17_Chr8g0373301 33.754 317 159 11 190 485 182 468 5.03e-41 153
Msa1025630 MtrunA17_Chr5g0412111 26.210 496 308 17 11 485 5 463 5.07e-41 153
Msa1025630 MtrunA17_Chr7g0232331 35.563 284 148 9 217 486 207 469 7.05e-41 152
Msa1025630 MtrunA17_Chr5g0442491 28.240 517 274 22 12 481 6 472 1.14e-40 152
Msa1025630 MtrunA17_Chr8g0334831 26.535 505 299 16 12 480 7 475 3.02e-40 151
Msa1025630 MtrunA17_Chr5g0431441 25.314 478 308 13 11 476 18 458 3.31e-40 151
Msa1025630 MtrunA17_Chr5g0409591 25.483 518 295 15 12 478 5 482 5.44e-40 150
Msa1025630 MtrunA17_Chr8g0339441 40.455 220 104 6 275 479 218 425 6.12e-40 149
Msa1025630 MtrunA17_Chr5g0403641 26.707 498 282 17 9 479 57 498 6.28e-40 151
Msa1025630 MtrunA17_Chr5g0429711 27.178 482 309 17 12 483 12 461 1.51e-39 149
Msa1025630 MtrunA17_Chr5g0431421 25.720 486 311 13 8 485 7 450 1.64e-39 149
Msa1025630 MtrunA17_Chr7g0232401 30.711 394 210 16 108 485 123 469 3.29e-39 148
Msa1025630 MtrunA17_Chr7g0232311 35.018 277 144 6 217 480 207 460 8.61e-39 147
Msa1025630 MtrunA17_Chr5g0442511 32.432 296 170 9 203 484 215 494 8.84e-39 147
Msa1025630 MtrunA17_Chr2g0278741 26.793 474 296 15 1 459 87 524 9.73e-39 148
Msa1025630 MtrunA17_Chr1g0153451 35.507 276 142 7 217 479 207 459 1.33e-38 146
Msa1025630 MtrunA17_Chr5g0431401 25.207 484 316 12 8 485 7 450 1.41e-38 146
Msa1025630 MtrunA17_Chr8g0334851 33.133 332 170 12 180 488 172 474 1.77e-38 146
Msa1025630 MtrunA17_Chr2g0278721 27.637 474 286 17 4 459 8 442 5.43e-38 148
Msa1025630 MtrunA17_Chr2g0278721 25.690 471 296 17 10 459 516 953 3.65e-28 119
Msa1025630 MtrunA17_Chr8g0336741 27.439 492 301 15 9 479 11 467 6.68e-38 144
Msa1025630 MtrunA17_Chr8g0334861 35.252 278 145 7 217 480 204 460 6.71e-38 144
Msa1025630 MtrunA17_Chr6g0462541 40.367 218 107 5 271 481 260 461 1.09e-37 144
Msa1025630 MtrunA17_Chr4g0032331 26.316 513 291 22 1 485 1 454 1.35e-37 143
Msa1025630 MtrunA17_Chr1g0153461 37.391 230 112 6 273 486 2 215 1.48e-37 137
Msa1025630 MtrunA17_Chr3g0106231 25.684 475 296 15 11 476 18 444 2.26e-37 143
Msa1025630 MtrunA17_Chr8g0336731 34.657 277 146 8 217 480 233 487 3.33e-37 143
Msa1025630 MtrunA17_Chr6g0454221 35.685 241 137 5 243 482 6 229 4.47e-37 138
Msa1025630 MtrunA17_Chr2g0302961 25.600 500 312 17 8 483 2 465 7.08e-37 141
Msa1025630 MtrunA17_Chr4g0072771 27.490 502 282 17 9 485 23 467 7.58e-37 141
Msa1025630 MtrunA17_Chr7g0241781 27.233 459 266 16 9 459 7 405 1.29e-36 140
Msa1025630 MtrunA17_Chr3g0118751 25.403 496 290 14 11 483 6 444 2.98e-36 139
Msa1025630 MtrunA17_Chr5g0431371 25.052 479 317 12 11 485 10 450 4.70e-36 139
Msa1025630 MtrunA17_Chr1g0196851 26.940 464 279 15 8 452 46 468 6.11e-36 139
Msa1025630 MtrunA17_Chr5g0401721 26.775 493 315 15 9 483 6 470 8.21e-36 139
Msa1025630 MtrunA17_Chr7g0241801 26.978 493 266 16 9 495 7 411 2.01e-35 137
Msa1025630 MtrunA17_Chr5g0429681 25.311 482 319 15 12 481 45 497 2.58e-35 137
Msa1025630 MtrunA17_Chr4g0069611 25.714 490 315 15 10 491 14 462 5.58e-35 136
Msa1025630 MtrunA17_Chr7g0249961 34.703 219 125 5 265 483 59 259 7.65e-35 131
Msa1025630 MtrunA17_Chr5g0432731 30.450 289 168 7 204 486 38 299 1.14e-34 132
Msa1025630 MtrunA17_Chr5g0426401 30.241 291 181 6 176 462 16 288 3.71e-34 130
Msa1025630 MtrunA17_Chr3g0118721 32.013 303 150 8 182 483 42 289 9.98e-34 129
Msa1025630 MtrunA17_Chr4g0042931 28.063 506 296 20 6 485 2 465 1.46e-33 132
Msa1025630 MtrunA17_Chr2g0302991 26.008 496 312 19 8 483 2 462 1.52e-33 132
Msa1025630 MtrunA17_Chr3g0106251 32.567 261 146 7 219 476 53 286 1.86e-33 129
Msa1025630 MtrunA17_Chr4g0072761 25.600 500 288 17 7 480 11 452 2.21e-33 131
Msa1025630 MtrunA17_Chr6g0454171 28.662 314 185 8 175 483 30 309 2.22e-33 128
Msa1025630 MtrunA17_Chr8g0336251 25.380 461 312 12 6 457 2 439 7.82e-33 130
Msa1025630 MtrunA17_Chr8g0336321 25.376 465 307 12 6 457 2 439 1.13e-32 130
Msa1025630 MtrunA17_Chr3g0079711 37.629 194 96 5 301 480 3 185 1.90e-32 122
Msa1025630 MtrunA17_Chr4g0029131 25.607 453 276 14 7 442 8 416 3.33e-32 130
Msa1025630 MtrunA17_Chr6g0482061 28.513 491 305 20 1 470 1 466 4.69e-32 128
Msa1025630 MtrunA17_Chr4g0040691 25.316 474 290 14 6 458 3 433 5.04e-32 128
Msa1025630 MtrunA17_Chr6g0466831 25.546 458 299 14 10 459 17 440 2.93e-31 125
Msa1025630 MtrunA17_Chr6g0466841 24.508 457 305 13 10 459 17 440 3.88e-31 125
Msa1025630 MtrunA17_Chr6g0464091 27.404 416 266 13 10 411 17 410 9.26e-31 124
Msa1025630 MtrunA17_Chr4g0040711 24.792 480 285 15 6 458 3 433 6.02e-30 122
Msa1025630 MtrunA17_Chr2g0302851 26.124 467 285 16 10 459 15 438 6.24e-30 122
Msa1025630 MtrunA17_Chr8g0355011 25.936 374 206 8 121 483 48 361 6.62e-30 120
Msa1025630 MtrunA17_Chr5g0448551 25.776 419 256 16 12 410 8 391 7.15e-30 121
Msa1025630 MtrunA17_Chr4g0042891 26.148 501 314 18 6 485 2 467 4.06e-29 119
Msa1025630 MtrunA17_Chr6g0454371 34.973 183 102 4 301 483 5 170 1.17e-28 111
Msa1025630 MtrunA17_Chr8g0367221 27.251 411 257 15 10 402 797 1183 7.65e-28 118
Msa1025630 MtrunA17_Chr8g0367221 25.542 415 258 14 10 402 11 396 1.85e-23 104
Msa1025630 MtrunA17_Chr8g0367221 30.806 211 128 8 277 485 1548 1742 1.75e-16 83.2
Msa1025630 MtrunA17_Chr4g0029151 22.414 464 299 13 7 452 16 436 9.73e-28 115
Msa1025630 MtrunA17_Chr2g0283041 24.056 503 304 18 8 483 4 455 3.39e-27 114
Msa1025630 MtrunA17_Chr4g0039881 25.270 463 270 17 21 458 2 413 2.60e-26 111
Msa1025630 MtrunA17_Chr7g0232351 39.130 184 87 6 217 387 207 378 3.96e-26 109
Msa1025630 MtrunA17_Chr2g0319761 24.576 472 313 13 10 472 7 444 9.14e-26 109
Msa1025630 MtrunA17_Chr3g0092031 34.426 183 106 5 277 459 6 174 2.26e-25 103
Msa1025630 MtrunA17_Chr2g0319801 24.678 466 305 11 5 458 2 433 2.27e-25 108
Msa1025630 MtrunA17_Chr8g0337381 39.286 140 71 3 348 486 2 128 8.44e-25 99.8
Msa1025630 MtrunA17_Chr1g0207881 23.542 480 261 18 10 484 7 385 3.31e-24 104
Msa1025630 MtrunA17_Chr8g0336261 36.913 149 78 2 301 449 5 137 3.86e-24 97.8
Msa1025630 MtrunA17_Chr2g0319731 24.788 472 305 12 1 458 15 450 6.80e-24 104
Msa1025630 MtrunA17_Chr2g0319791 23.427 461 307 12 10 458 7 433 9.26e-24 103
Msa1025630 MtrunA17_Chr6g0454231 28.782 271 130 9 217 483 7 218 3.24e-23 102
Msa1025630 MtrunA17_Chr7g0250021 26.124 356 203 16 6 339 7 324 5.03e-23 99.8
Msa1025630 MtrunA17_Chr5g0431431 30.631 222 117 7 219 438 157 343 6.86e-23 100
Msa1025630 MtrunA17_Chr2g0319751 24.459 462 301 12 10 458 484 910 7.80e-23 102
Msa1025630 MtrunA17_Chr2g0319751 23.427 461 283 12 10 458 7 409 1.84e-22 101
Msa1025630 MtrunA17_Chr5g0427571 27.935 247 145 7 222 457 49 273 2.07e-21 94.7
Msa1025630 MtrunA17_Chr4g0029161 24.169 451 257 17 7 442 8 388 2.17e-21 96.7
Msa1025630 MtrunA17_Chr6g0477011 25.407 307 207 6 10 312 15 303 4.45e-16 79.0
Msa1025630 MtrunA17_Chr4g0066231 48.052 77 40 0 386 462 1 77 7.89e-16 72.4
Msa1025630 MtrunA17_Chr7g0272701 31.746 126 83 2 102 224 27 152 2.56e-13 67.8
Msa1025630 MtrunA17_Chr6g0454391 37.209 86 41 1 359 444 8 80 8.83e-12 62.4
Msa1025630 MtrunA17_Chr5g0426411 29.375 160 102 6 8 163 9 161 9.60e-12 63.5
Msa1025630 MtrunA17_Chr8g0336271 24.590 244 145 9 11 229 10 239 8.86e-11 62.8
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa1025630 AT2G15490.3 40.733 491 271 8 6 487 2 481 8.66e-130 386
Msa1025630 AT2G15490.1 40.486 494 271 8 6 487 2 484 4.07e-129 384
Msa1025630 AT2G15480.2 40.120 501 276 10 3 487 2 494 4.79e-127 379
Msa1025630 AT2G15480.1 39.879 494 277 8 3 487 2 484 5.38e-127 379
Msa1025630 AT2G36770.1 40.845 497 280 8 2 490 5 495 2.17e-126 377
Msa1025630 AT4G34131.1 41.582 493 265 11 3 485 2 481 8.09e-126 375
Msa1025630 AT2G36800.1 41.393 488 267 10 10 486 11 490 4.88e-123 369
Msa1025630 AT2G36780.1 39.596 495 289 7 2 490 5 495 9.85e-122 365
Msa1025630 AT4G34135.1 41.093 494 271 10 1 485 1 483 1.68e-121 365
Msa1025630 AT2G36750.1 40.286 489 277 9 10 490 9 490 8.62e-119 358
Msa1025630 AT2G36790.1 41.189 488 273 8 10 489 12 493 3.20e-118 357
Msa1025630 AT2G36760.1 38.956 498 290 8 2 491 5 496 4.05e-118 356
Msa1025630 AT4G34138.1 38.866 494 275 9 8 490 8 485 3.17e-111 338
Msa1025630 AT3G53160.1 37.090 488 289 10 6 483 3 482 6.01e-104 320
Msa1025630 AT3G53150.1 37.251 502 294 8 1 483 10 509 1.32e-102 317
Msa1025630 AT4G34135.2 38.788 330 191 5 1 322 1 327 1.45e-75 241
Msa1025630 AT5G14860.1 33.136 507 283 19 1 483 1 475 1.42e-67 225
Msa1025630 AT2G16890.2 31.944 504 289 17 11 494 9 478 4.37e-64 216
Msa1025630 AT1G22400.1 31.373 510 308 16 1 490 1 488 6.21e-64 216
Msa1025630 AT1G10400.1 32.720 489 284 15 9 483 5 462 1.89e-62 211
Msa1025630 AT1G22380.1 31.579 475 280 15 11 464 13 463 2.25e-62 211
Msa1025630 AT1G22340.1 31.102 508 292 19 1 480 1 478 3.80e-59 203
Msa1025630 AT1G22360.1 29.020 510 302 14 1 483 1 477 1.22e-58 201
Msa1025630 AT2G16890.3 32.037 437 251 14 11 428 9 418 6.36e-58 198
Msa1025630 AT5G03490.1 30.041 486 287 16 11 484 19 463 1.03e-56 196
Msa1025630 AT1G78270.1 30.333 511 285 18 6 483 8 480 8.23e-56 194
Msa1025630 AT1G73880.1 28.942 501 312 17 2 490 5 473 3.24e-55 192
Msa1025630 AT1G22360.2 29.773 440 264 11 1 414 1 421 3.44e-55 192
Msa1025630 AT1G22370.2 30.211 427 265 13 6 414 8 419 9.65e-55 191
Msa1025630 AT1G51210.1 29.412 459 269 18 11 459 20 433 1.84e-51 181
Msa1025630 AT2G31750.1 27.607 489 296 16 11 483 8 454 5.45e-50 177
Msa1025630 AT2G31750.2 27.607 489 296 16 11 483 8 454 6.54e-50 178
Msa1025630 AT1G05675.1 28.125 480 299 13 11 480 6 449 1.33e-49 176
Msa1025630 AT5G12890.1 26.148 501 327 13 3 482 2 480 7.12e-49 175
Msa1025630 AT3G02100.1 28.429 503 294 18 3 485 5 461 7.17e-49 175
Msa1025630 AT4G15490.1 27.600 500 294 17 11 483 8 466 1.43e-48 174
Msa1025630 AT1G24100.1 29.098 488 291 18 11 483 11 458 3.35e-48 173
Msa1025630 AT4G15480.1 27.000 500 318 15 1 483 9 478 7.75e-48 172
Msa1025630 AT1G06000.1 28.747 487 270 15 11 483 10 433 8.74e-48 171
Msa1025630 AT5G05870.1 27.755 490 306 13 5 483 2 454 2.75e-47 171
Msa1025630 AT4G01070.1 30.512 508 280 21 11 488 8 472 4.21e-47 170
Msa1025630 AT1G01420.2 29.142 501 291 19 1 476 1 462 1.54e-46 169
Msa1025630 AT3G11340.1 29.039 489 283 16 12 486 9 447 1.54e-46 168
Msa1025630 AT4G15500.1 26.984 504 295 21 11 487 9 466 1.86e-46 168
Msa1025630 AT5G26310.1 28.320 512 279 20 11 484 7 468 2.10e-46 168
Msa1025630 AT1G01420.1 29.352 494 285 19 8 476 5 459 6.11e-46 167
Msa1025630 AT1G05680.1 27.651 481 300 14 11 480 6 449 8.97e-46 166
Msa1025630 AT2G43820.1 27.310 487 305 16 7 485 3 448 1.75e-45 165
Msa1025630 AT3G50740.1 27.930 512 291 19 11 486 7 476 2.47e-45 166
Msa1025630 AT2G18570.1 26.946 501 295 21 8 478 2 461 3.06e-45 165
Msa1025630 AT2G31790.1 26.694 487 299 14 11 480 8 453 5.20e-45 164
Msa1025630 AT5G05860.1 27.572 486 292 16 4 476 2 440 6.98e-45 164
Msa1025630 AT2G30150.2 26.559 497 290 13 11 486 13 455 7.74e-45 164
Msa1025630 AT2G28080.1 27.500 480 311 13 15 485 22 473 9.26e-45 164
Msa1025630 AT5G05880.1 27.200 500 290 14 8 486 5 451 1.05e-44 163
Msa1025630 AT2G43840.1 27.629 485 296 17 11 484 7 447 1.12e-44 163
Msa1025630 AT2G43840.2 27.423 485 297 17 11 484 7 447 3.09e-44 162
Msa1025630 AT2G29730.1 26.166 493 319 16 10 487 4 466 3.63e-44 162
Msa1025630 AT2G36970.1 26.163 516 316 16 1 490 1 477 3.23e-43 160
Msa1025630 AT4G15550.1 27.181 493 305 17 11 482 13 472 3.37e-43 159
Msa1025630 AT5G05900.1 27.789 493 285 18 8 481 5 445 3.42e-43 159
Msa1025630 AT2G30150.1 26.166 493 289 13 15 486 1 439 3.55e-43 159
Msa1025630 AT3G16520.3 34.545 275 146 8 214 480 208 456 1.12e-42 158
Msa1025630 AT3G21760.1 26.916 509 308 16 9 483 2 480 1.49e-42 158
Msa1025630 AT3G21560.1 26.613 496 306 19 11 483 12 472 1.55e-42 158
Msa1025630 AT5G66690.1 26.448 518 285 17 11 486 7 470 3.67e-42 157
Msa1025630 AT4G36770.1 27.935 494 273 18 9 469 2 445 4.07e-42 156
Msa1025630 AT3G21800.1 25.933 509 309 17 8 483 2 475 1.42e-41 155
Msa1025630 AT4G14090.1 26.494 502 289 18 6 482 8 454 2.77e-41 154
Msa1025630 AT3G46660.1 28.398 493 286 16 12 486 15 458 4.61e-41 153
Msa1025630 AT5G59590.1 25.749 501 302 16 1 483 1 449 4.87e-41 153
Msa1025630 AT3G46700.1 27.143 490 290 16 11 485 9 446 7.25e-41 152
Msa1025630 AT3G46680.1 25.615 488 297 16 11 481 9 447 1.80e-40 151
Msa1025630 AT4G15260.1 28.158 380 213 9 132 483 7 354 2.43e-40 149
Msa1025630 AT2G30140.2 26.061 495 288 14 8 480 9 447 2.55e-40 151
Msa1025630 AT3G16520.2 34.601 263 138 8 214 468 208 444 2.66e-40 151
Msa1025630 AT3G16520.1 34.601 263 138 8 214 468 208 444 2.79e-40 151
Msa1025630 AT3G21790.1 26.275 510 308 17 9 483 2 478 2.96e-40 152
Msa1025630 AT3G55700.1 27.475 495 291 17 11 486 8 453 3.35e-40 151
Msa1025630 AT2G30140.1 26.263 495 288 14 8 480 9 448 5.51e-40 150
Msa1025630 AT5G05890.1 25.641 507 299 14 5 486 2 455 5.68e-40 150
Msa1025630 AT3G21780.1 24.040 495 328 15 9 483 2 468 8.31e-40 150
Msa1025630 AT2G23250.1 28.602 472 284 17 21 483 8 435 1.66e-39 149
Msa1025630 AT2G29740.1 26.758 512 308 18 1 483 1 474 2.04e-39 149
Msa1025630 AT4G15280.2 26.355 535 287 21 1 483 26 505 2.12e-39 150
Msa1025630 AT1G07240.1 25.852 499 314 14 12 483 6 475 2.22e-39 149
Msa1025630 AT5G59580.1 25.714 490 302 16 11 486 9 450 6.03e-39 147
Msa1025630 AT4G15280.1 26.565 527 280 21 9 483 2 473 7.57e-39 147
Msa1025630 AT5G38010.1 25.692 506 300 15 1 483 1 453 1.09e-38 147
Msa1025630 AT1G01390.1 29.259 499 288 19 8 480 5 464 1.43e-38 147
Msa1025630 AT1G07260.1 25.595 504 310 18 9 483 4 471 1.55e-38 147
Msa1025630 AT3G46670.1 26.962 497 288 17 11 486 9 451 1.70e-38 146
Msa1025630 AT1G01390.2 29.735 491 280 19 8 472 22 473 1.82e-38 147
Msa1025630 AT1G07250.1 27.606 518 283 22 9 483 4 472 6.20e-38 145
Msa1025630 AT2G23260.1 27.310 487 301 21 9 483 8 453 7.99e-38 144
Msa1025630 AT1G05530.1 25.709 494 306 15 9 483 3 454 8.69e-38 144
Msa1025630 AT2G18560.1 34.112 214 121 5 275 478 168 371 1.42e-37 142
Msa1025630 AT3G55710.1 27.755 490 306 15 11 489 8 460 6.04e-37 142
Msa1025630 AT3G46650.1 26.105 475 283 15 11 476 10 425 8.47e-37 141
Msa1025630 AT2G26480.1 26.327 490 290 17 9 480 6 442 1.56e-36 140
Msa1025630 AT1G22370.1 32.922 243 154 6 177 414 11 249 3.56e-36 136
Msa1025630 AT2G15490.2 31.746 189 121 2 6 186 2 190 6.10e-36 135
Msa1025630 AT2G15490.2 32.540 126 78 3 363 487 151 270 6.70e-12 66.6
Msa1025630 AT2G29710.1 25.100 498 306 17 12 483 6 462 8.36e-35 136
Msa1025630 AT5G49690.1 24.449 499 308 16 10 491 9 455 4.44e-34 134
Msa1025630 AT5G65550.1 27.443 481 282 20 9 460 7 449 5.22e-34 134
Msa1025630 AT3G21750.1 24.847 491 329 14 9 483 2 468 6.01e-34 134
Msa1025630 AT3G46690.1 25.255 491 303 12 11 485 9 451 7.23e-34 133
Msa1025630 AT5G38040.1 25.895 475 295 13 21 483 20 449 7.49e-34 133
Msa1025630 AT3G46720.1 25.859 495 286 15 11 485 9 442 2.10e-33 132
Msa1025630 AT1G05560.1 25.202 496 299 16 11 483 5 451 2.46e-32 129
Msa1025630 AT1G05560.2 25.202 496 299 16 11 483 55 501 3.21e-32 129
Msa1025630 AT2G29750.1 26.052 499 310 20 11 483 8 473 4.66e-32 129
Msa1025630 AT1G30530.1 25.714 490 296 18 11 483 12 450 4.72e-31 125
Msa1025630 AT5G17050.1 23.529 493 309 16 11 483 12 456 1.31e-29 121
Msa1025630 AT2G16890.4 30.841 321 182 12 11 312 9 308 1.03e-28 116
Msa1025630 AT2G16890.1 30.841 321 182 12 11 312 9 308 1.03e-28 116
Msa1025630 AT5G17030.1 25.049 507 297 21 4 483 5 455 2.34e-28 117
Msa1025630 AT3G29630.2 25.667 487 290 16 8 490 3 421 6.85e-28 115
Msa1025630 AT3G29630.1 25.205 488 317 15 8 490 3 447 1.00e-27 115
Msa1025630 AT4G27570.1 24.946 461 269 15 9 447 5 410 1.56e-27 115
Msa1025630 AT3G22250.1 24.540 489 289 18 12 467 9 450 3.73e-27 114
Msa1025630 AT5G17040.1 23.361 488 306 17 11 483 5 439 4.31e-27 114
Msa1025630 AT5G17040.2 28.413 271 164 7 214 483 96 337 1.90e-26 110
Msa1025630 AT2G22590.1 24.792 480 286 16 8 458 12 445 2.02e-26 112
Msa1025630 AT4G27560.1 24.396 455 279 14 9 447 5 410 2.79e-26 111
Msa1025630 AT1G50580.1 26.170 470 270 19 8 457 3 415 2.62e-24 105
Msa1025630 AT1G64910.1 23.614 415 272 12 10 416 5 382 8.95e-23 101
Msa1025630 AT5G53990.1 24.359 468 270 18 10 454 5 411 1.25e-21 97.8
Msa1025630 AT5G54010.1 24.740 481 272 22 8 464 3 417 5.99e-21 95.9
Msa1025630 AT1G64920.1 22.754 501 306 20 8 486 3 444 5.54e-20 92.8
Msa1025630 AT5G37950.1 25.574 305 190 9 94 387 65 343 5.68e-20 91.7
Msa1025630 AT2G22930.1 23.093 485 312 18 10 484 5 438 3.80e-19 90.1
Msa1025630 AT5G37950.2 25.246 305 185 9 94 387 65 337 5.89e-19 88.6
Msa1025630 AT4G09500.1 23.799 458 271 18 9 458 4 391 1.10e-18 88.6
Msa1025630 AT4G09500.2 23.729 472 279 18 9 458 4 416 2.63e-18 87.8
Msa1025630 AT5G54060.1 20.766 496 331 16 8 480 10 466 8.80e-16 80.1
Msa1025630 AT4G01070.2 26.849 365 202 17 11 341 8 341 2.63e-14 74.7

Find 99 sgRNAs with CRISPR-Local

Find 254 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
AATCCTGCCGCTGCCTATTT+TGG 0.139831 7_1:+56403107 Msa1025630:CDS
GAGCAAAAGAACATAATTTA+TGG 0.225380 7_1:+56403750 Msa1025630:CDS
TCCTCATTTCTTTGCTCTCT+TGG 0.225932 7_1:-56403847 None:intergenic
GCAACTTCTCATTGTAAAAT+TGG 0.243211 7_1:-56403694 None:intergenic
TTTCTTCCATTTCCCTCAGC+TGG 0.257813 7_1:+56402552 Msa1025630:CDS
GCCACTTCACTTGAAATTCT+TGG 0.268252 7_1:+56402780 Msa1025630:CDS
GTCTATACTTCATCATTAAA+TGG 0.271841 7_1:-56402980 None:intergenic
CAACAAGGTTAATGAGAAAA+AGG 0.298342 7_1:+56403268 Msa1025630:CDS
GGCACCACAGCTGTTGATAT+TGG 0.309956 7_1:+56403568 Msa1025630:CDS
AGGGCTATATCATATGGAAT+TGG 0.320112 7_1:+56403546 Msa1025630:CDS
AAGGATGAAAGAAAGCAAAA+AGG 0.321576 7_1:+56403526 Msa1025630:CDS
AGTCTTGCTGTGTCAATCAT+AGG 0.326235 7_1:-56402585 None:intergenic
GTCACAATCCCTCCGGTTGC+AGG 0.329054 7_1:-56403596 None:intergenic
GTGATGTAATAATGAATTCT+TGG 0.333100 7_1:-56402933 None:intergenic
AAACAACATGAAGTTGGTTA+TGG 0.334994 7_1:-56402530 None:intergenic
GGATGGCACAGTTGGAGAAT+TGG 0.354123 7_1:-56402959 None:intergenic
TTCATGCATTGGTCCAAAAT+AGG 0.360513 7_1:-56403120 None:intergenic
ACACAGAAATTTACAATTCA+AGG 0.375937 7_1:+56403026 Msa1025630:CDS
AAACTTAGTAAGACTACAAT+GGG 0.383326 7_1:+56403206 Msa1025630:CDS
GAAATCATTGAAGAAATCTA+AGG 0.391534 7_1:+56403961 Msa1025630:CDS
AACAACATGAAGTTGGTTAT+GGG 0.392319 7_1:-56402529 None:intergenic
AGCAAAAGAACATAATTTAT+GGG 0.402653 7_1:+56403751 Msa1025630:CDS
TTCTTCCATTTCCCTCAGCT+GGG 0.403670 7_1:+56402553 Msa1025630:CDS
TTCTTTGCATGTAACCAATC+AGG 0.407903 7_1:-56403086 None:intergenic
TTGTTGATCCAAGCTGAAAC+TGG 0.411564 7_1:-56403251 None:intergenic
TGCAGAGAAAGTGGTGAGAA+GGG 0.417082 7_1:+56403784 Msa1025630:CDS
TCAAGGAGTAAGGATGCTTC+AGG 0.425756 7_1:+56402812 Msa1025630:CDS
TCTGTATTGTATGTATGTTT+TGG 0.426684 7_1:+56403365 Msa1025630:CDS
CTACACATGCCAATGCTTCA+AGG 0.435971 7_1:+56402643 Msa1025630:CDS
CTACAATGGGGATCAAATCT+TGG 0.436907 7_1:+56403219 Msa1025630:CDS
GAGCATGAGGAAACCTAGTA+TGG 0.437301 7_1:-56403391 None:intergenic
ATATGCCCAGCTGAGGGAAA+TGG 0.438806 7_1:-56402558 None:intergenic
AAGAGGAAGAATGGCTAGAT+TGG 0.439920 7_1:+56403321 Msa1025630:CDS
ACCTTCCTCTATAGTCCTCT+TGG 0.448985 7_1:-56403897 None:intergenic
GGGCTATATCATATGGAATT+GGG 0.452750 7_1:+56403547 Msa1025630:CDS
TCCTGCAAGAATTTGAGAAA+AGG 0.458681 7_1:+56403507 Msa1025630:CDS
CTCCTCTGGAAGTTCCTGAT+TGG 0.459643 7_1:+56403072 Msa1025630:CDS
ATAGACACTGACATCAGTTC+AGG 0.460139 7_1:+56402678 Msa1025630:CDS
GTAAAATCATTCAAGGAGTA+AGG 0.462825 7_1:+56402802 Msa1025630:CDS
GAATCAGAGAAAAGAAGTTA+TGG 0.476056 7_1:+56403140 Msa1025630:CDS
ATGCAGAGAAAGTGGTGAGA+AGG 0.478166 7_1:+56403783 Msa1025630:CDS
CATAGAGGAACTTGCGAAAG+AGG 0.483596 7_1:+56403304 Msa1025630:CDS
ATTCTTGGTAAAATCATTCA+AGG 0.484152 7_1:+56402795 Msa1025630:CDS
CATTAAATGGATGGCACAGT+TGG 0.487293 7_1:-56402967 None:intergenic
ACCAAGAATTTCAAGTGAAG+TGG 0.491909 7_1:-56402781 None:intergenic
AACACCGGCCACGTAATCAT+TGG 0.492199 7_1:-56403665 None:intergenic
TACAATTGAGATGACTCCTC+TGG 0.492446 7_1:+56403058 Msa1025630:CDS
ATATTGGAACACCCTGCAAC+CGG 0.495925 7_1:+56403584 Msa1025630:CDS
GTGGAAGCAGCTGCAAAACT+AGG 0.504983 7_1:+56402906 Msa1025630:CDS
CAGTTCCCTTCAGCTCAAGT+TGG 0.509931 7_1:+56402726 Msa1025630:CDS
ACTATTGAAAGCATAAATGC+TGG 0.513228 7_1:+56403638 Msa1025630:CDS
GAGAAGGGAAGAGATAGTTA+AGG 0.514567 7_1:+56403799 Msa1025630:CDS
ATATCAGAGACTATGCAATC+TGG 0.516846 7_1:-56402867 None:intergenic
AACTTGCGAAAGAGGAAGAA+TGG 0.527218 7_1:+56403312 Msa1025630:CDS
AGGATGAGAGCAAAGAAACT+TGG 0.527542 7_1:+56403866 Msa1025630:CDS
GCAGCTGCTTCCACTGTCCA+CGG 0.535127 7_1:-56402897 None:intergenic
GGGAGACCAACTTGAGCTGA+AGG 0.537436 7_1:-56402732 None:intergenic
TAACATTAATGCAGAGAAAG+TGG 0.537539 7_1:+56403775 Msa1025630:CDS
GTCTTGCTGTGTCAATCATA+GGG 0.544513 7_1:-56402584 None:intergenic
TCACAATCCCTCCGGTTGCA+GGG 0.545569 7_1:-56403595 None:intergenic
GGTCCAAAATAGGCAGCGGC+AGG 0.551932 7_1:-56403110 None:intergenic
TTTGCCAATGATTACGTGGC+CGG 0.556848 7_1:+56403661 Msa1025630:CDS
CAACTTGTAGAAATTGCGCA+TGG 0.559449 7_1:+56403413 Msa1025630:CDS
ATACTTCATCATTAAATGGA+TGG 0.562120 7_1:-56402976 None:intergenic
GGGATCAAATCTTGGAGTGT+AGG 0.562776 7_1:+56403227 Msa1025630:CDS
ACCAAGAGAGCAAAGAAATG+AGG 0.564369 7_1:+56403846 Msa1025630:CDS
GATAAAGATGAAGATGGAGA+TGG 0.566747 7_1:+56403482 Msa1025630:CDS
TTGAAGAAATCTAAGGCACT+TGG 0.574510 7_1:+56403968 Msa1025630:CDS
GGAGTCATCTCAATTGTATG+AGG 0.575171 7_1:-56403053 None:intergenic
GTGTAGGACCAGTTTCAGCT+TGG 0.580002 7_1:+56403243 Msa1025630:CDS
GGATTGTGACTCATTGTGGT+TGG 0.583232 7_1:+56403609 Msa1025630:CDS
AACTTGTAGAAATTGCGCAT+GGG 0.583832 7_1:+56403414 Msa1025630:CDS
ATTTCTACAAGTTGAGCATG+AGG 0.596842 7_1:-56403404 None:intergenic
GCTCAAGTTGGTCTCCCTGA+CGG 0.597767 7_1:+56402738 Msa1025630:CDS
ATTGGCATGTGTAGTGATGA+TGG 0.600742 7_1:-56402634 None:intergenic
AAAACTTAGTAAGACTACAA+TGG 0.601608 7_1:+56403205 Msa1025630:CDS
GCAAGACTATTTGCAAAGCA+TGG 0.602004 7_1:+56402600 Msa1025630:CDS
AGGGTTCATATGCCCAGCTG+AGG 0.606316 7_1:-56402565 None:intergenic
TGCTGCCAAGAGGACTATAG+AGG 0.613396 7_1:+56403892 Msa1025630:CDS
ACAATGAGTCACAATCCCTC+CGG 0.620558 7_1:-56403603 None:intergenic
GGAGACCAACTTGAGCTGAA+GGG 0.621494 7_1:-56402731 None:intergenic
CATTGGTCCAAAATAGGCAG+CGG 0.626587 7_1:-56403114 None:intergenic
GGGTTCATATGCCCAGCTGA+GGG 0.630744 7_1:-56402564 None:intergenic
GCCAAGAGGACTATAGAGGA+AGG 0.631460 7_1:+56403896 Msa1025630:CDS
TAAAATTGGTCAGCAAACAC+CGG 0.633866 7_1:-56403680 None:intergenic
CTGGTTTGCCAATGATTACG+TGG 0.638379 7_1:+56403657 Msa1025630:CDS
AGTTTCAGCTTGGATCAACA+AGG 0.639613 7_1:+56403253 Msa1025630:CDS
TTGGAACACCCTGCAACCGG+AGG 0.640760 7_1:+56403587 Msa1025630:CDS
TTGAAGATAGGGATCCCTGT+AGG 0.641117 7_1:+56403728 Msa1025630:CDS
GGAGGGATTGTGACTCATTG+TGG 0.643212 7_1:+56403605 Msa1025630:CDS
TCAGAAACTAAATTATCATG+AGG 0.644747 7_1:-56403002 None:intergenic
TGGAACACCCTGCAACCGGA+GGG 0.662971 7_1:+56403588 Msa1025630:CDS
TGTTCCAATATCAACAGCTG+TGG 0.667359 7_1:-56403572 None:intergenic
AACTTGGTGATGCTGCCAAG+AGG 0.668809 7_1:+56403882 Msa1025630:CDS
AACCAATCAGGAACTTCCAG+AGG 0.675298 7_1:-56403074 None:intergenic
TCTCTGATATGATGTATCCG+TGG 0.682925 7_1:+56402880 Msa1025630:CDS
AAGAGGACTATAGAGGAAGG+TGG 0.683468 7_1:+56403899 Msa1025630:CDS
TATGATGTATCCGTGGACAG+TGG 0.722561 7_1:+56402887 Msa1025630:CDS
AACTTAGTAAGACTACAATG+GGG 0.812594 7_1:+56403207 Msa1025630:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! AAAAATGATAAAGATGAAGA+TGG + chr7_1:56403476-56403495 Msa1025630:CDS 20.0%
!! AGCAAAAGAACATAATTTAT+GGG + chr7_1:56403751-56403770 Msa1025630:CDS 20.0%
!! AAAAATGATAAAGATGAAGA+TGG + chr7_1:56403476-56403495 Msa1025630:CDS 20.0%
!! AGCAAAAGAACATAATTTAT+GGG + chr7_1:56403751-56403770 Msa1025630:CDS 20.0%
! ATTCTTGGTAAAATCATTCA+AGG + chr7_1:56402795-56402814 Msa1025630:CDS 25.0%
! GTGATGTAATAATGAATTCT+TGG - chr7_1:56402936-56402955 None:intergenic 25.0%
! ATACTTCATCATTAAATGGA+TGG - chr7_1:56402979-56402998 None:intergenic 25.0%
! GTCTATACTTCATCATTAAA+TGG - chr7_1:56402983-56403002 None:intergenic 25.0%
! TCAGAAACTAAATTATCATG+AGG - chr7_1:56403005-56403024 None:intergenic 25.0%
! ACACAGAAATTTACAATTCA+AGG + chr7_1:56403026-56403045 Msa1025630:CDS 25.0%
! AAAACTTAGTAAGACTACAA+TGG + chr7_1:56403205-56403224 Msa1025630:CDS 25.0%
! AAACTTAGTAAGACTACAAT+GGG + chr7_1:56403206-56403225 Msa1025630:CDS 25.0%
!! TCTGTATTGTATGTATGTTT+TGG + chr7_1:56403365-56403384 Msa1025630:CDS 25.0%
!! AATCAGGTCAAAATTTTATC+TGG + chr7_1:56403444-56403463 Msa1025630:CDS 25.0%
!! ATCAGGTCAAAATTTTATCT+GGG + chr7_1:56403445-56403464 Msa1025630:CDS 25.0%
!!! TTGTTGATGTTTTGAAGATA+GGG + chr7_1:56403717-56403736 Msa1025630:CDS 25.0%
! GAGCAAAAGAACATAATTTA+TGG + chr7_1:56403750-56403769 Msa1025630:CDS 25.0%
! GAAATCATTGAAGAAATCTA+AGG + chr7_1:56403961-56403980 Msa1025630:CDS 25.0%
! ATTCTTGGTAAAATCATTCA+AGG + chr7_1:56402795-56402814 Msa1025630:CDS 25.0%
! GTGATGTAATAATGAATTCT+TGG - chr7_1:56402936-56402955 None:intergenic 25.0%
! ATACTTCATCATTAAATGGA+TGG - chr7_1:56402979-56402998 None:intergenic 25.0%
! GTCTATACTTCATCATTAAA+TGG - chr7_1:56402983-56403002 None:intergenic 25.0%
! TCAGAAACTAAATTATCATG+AGG - chr7_1:56403005-56403024 None:intergenic 25.0%
! ACACAGAAATTTACAATTCA+AGG + chr7_1:56403026-56403045 Msa1025630:CDS 25.0%
! AAAACTTAGTAAGACTACAA+TGG + chr7_1:56403205-56403224 Msa1025630:CDS 25.0%
! AAACTTAGTAAGACTACAAT+GGG + chr7_1:56403206-56403225 Msa1025630:CDS 25.0%
!! TCTGTATTGTATGTATGTTT+TGG + chr7_1:56403365-56403384 Msa1025630:CDS 25.0%
!! AATCAGGTCAAAATTTTATC+TGG + chr7_1:56403444-56403463 Msa1025630:CDS 25.0%
!! ATCAGGTCAAAATTTTATCT+GGG + chr7_1:56403445-56403464 Msa1025630:CDS 25.0%
!!! TTGTTGATGTTTTGAAGATA+GGG + chr7_1:56403717-56403736 Msa1025630:CDS 25.0%
! GAGCAAAAGAACATAATTTA+TGG + chr7_1:56403750-56403769 Msa1025630:CDS 25.0%
! GAAATCATTGAAGAAATCTA+AGG + chr7_1:56403961-56403980 Msa1025630:CDS 25.0%
! AACAACATGAAGTTGGTTAT+GGG - chr7_1:56402532-56402551 None:intergenic 30.0%
! AAACAACATGAAGTTGGTTA+TGG - chr7_1:56402533-56402552 None:intergenic 30.0%
GAAGAAAAACAACATGAAGT+TGG - chr7_1:56402539-56402558 None:intergenic 30.0%
!!! TGTCAGTGTCTATTGATTTT+TGG - chr7_1:56402671-56402690 None:intergenic 30.0%
!! CTGAATAAGTTGAGTTTTGA+TGG - chr7_1:56402709-56402728 None:intergenic 30.0%
GTAAAATCATTCAAGGAGTA+AGG + chr7_1:56402802-56402821 Msa1025630:CDS 30.0%
GAATCAGAGAAAAGAAGTTA+TGG + chr7_1:56403140-56403159 Msa1025630:CDS 30.0%
! ATACAACAGTTTTCATGAAC+TGG + chr7_1:56403169-56403188 Msa1025630:CDS 30.0%
AACTTAGTAAGACTACAATG+GGG + chr7_1:56403207-56403226 Msa1025630:CDS 30.0%
CAACAAGGTTAATGAGAAAA+AGG + chr7_1:56403268-56403287 Msa1025630:CDS 30.0%
TTAATGAGAAAAAGGCCAAT+GGG + chr7_1:56403276-56403295 Msa1025630:CDS 30.0%
AAGGATGAAAGAAAGCAAAA+AGG + chr7_1:56403526-56403545 Msa1025630:CDS 30.0%
AGGATGAAAGAAAGCAAAAA+GGG + chr7_1:56403527-56403546 Msa1025630:CDS 30.0%
! ACTATTGAAAGCATAAATGC+TGG + chr7_1:56403638-56403657 Msa1025630:CDS 30.0%
GCAACTTCTCATTGTAAAAT+TGG - chr7_1:56403697-56403716 None:intergenic 30.0%
!!! CTTGTTGATGTTTTGAAGAT+AGG + chr7_1:56403716-56403735 Msa1025630:CDS 30.0%
TAACATTAATGCAGAGAAAG+TGG + chr7_1:56403775-56403794 Msa1025630:CDS 30.0%
! AACAACATGAAGTTGGTTAT+GGG - chr7_1:56402532-56402551 None:intergenic 30.0%
! AAACAACATGAAGTTGGTTA+TGG - chr7_1:56402533-56402552 None:intergenic 30.0%
GAAGAAAAACAACATGAAGT+TGG - chr7_1:56402539-56402558 None:intergenic 30.0%
!!! TGTCAGTGTCTATTGATTTT+TGG - chr7_1:56402671-56402690 None:intergenic 30.0%
!! CTGAATAAGTTGAGTTTTGA+TGG - chr7_1:56402709-56402728 None:intergenic 30.0%
GTAAAATCATTCAAGGAGTA+AGG + chr7_1:56402802-56402821 Msa1025630:CDS 30.0%
GAATCAGAGAAAAGAAGTTA+TGG + chr7_1:56403140-56403159 Msa1025630:CDS 30.0%
! ATACAACAGTTTTCATGAAC+TGG + chr7_1:56403169-56403188 Msa1025630:CDS 30.0%
AACTTAGTAAGACTACAATG+GGG + chr7_1:56403207-56403226 Msa1025630:CDS 30.0%
CAACAAGGTTAATGAGAAAA+AGG + chr7_1:56403268-56403287 Msa1025630:CDS 30.0%
TTAATGAGAAAAAGGCCAAT+GGG + chr7_1:56403276-56403295 Msa1025630:CDS 30.0%
AAGGATGAAAGAAAGCAAAA+AGG + chr7_1:56403526-56403545 Msa1025630:CDS 30.0%
AGGATGAAAGAAAGCAAAAA+GGG + chr7_1:56403527-56403546 Msa1025630:CDS 30.0%
! ACTATTGAAAGCATAAATGC+TGG + chr7_1:56403638-56403657 Msa1025630:CDS 30.0%
GCAACTTCTCATTGTAAAAT+TGG - chr7_1:56403697-56403716 None:intergenic 30.0%
!!! CTTGTTGATGTTTTGAAGAT+AGG + chr7_1:56403716-56403735 Msa1025630:CDS 30.0%
TAACATTAATGCAGAGAAAG+TGG + chr7_1:56403775-56403794 Msa1025630:CDS 30.0%
!!! TTTTTGGAACCTTGAAGCAT+TGG - chr7_1:56402655-56402674 None:intergenic 35.0%
! ACCAAGAATTTCAAGTGAAG+TGG - chr7_1:56402784-56402803 None:intergenic 35.0%
ATATCAGAGACTATGCAATC+TGG - chr7_1:56402870-56402889 None:intergenic 35.0%
TTCTTTGCATGTAACCAATC+AGG - chr7_1:56403089-56403108 None:intergenic 35.0%
! TTCATGCATTGGTCCAAAAT+AGG - chr7_1:56403123-56403142 None:intergenic 35.0%
! CTTTTCTCTGATTCATGCAT+TGG - chr7_1:56403134-56403153 None:intergenic 35.0%
GTTAATGAGAAAAAGGCCAA+TGG + chr7_1:56403275-56403294 Msa1025630:CDS 35.0%
TAATGAGAAAAAGGCCAATG+GGG + chr7_1:56403277-56403296 Msa1025630:CDS 35.0%
! ATTTCTACAAGTTGAGCATG+AGG - chr7_1:56403407-56403426 None:intergenic 35.0%
AACTTGTAGAAATTGCGCAT+GGG + chr7_1:56403414-56403433 Msa1025630:CDS 35.0%
GATAAAGATGAAGATGGAGA+TGG + chr7_1:56403482-56403501 Msa1025630:CDS 35.0%
TCCTGCAAGAATTTGAGAAA+AGG + chr7_1:56403507-56403526 Msa1025630:CDS 35.0%
! TCCTTTTCTCAAATTCTTGC+AGG - chr7_1:56403511-56403530 None:intergenic 35.0%
GCAAAAAGGGCTATATCATA+TGG + chr7_1:56403540-56403559 Msa1025630:CDS 35.0%
AGGGCTATATCATATGGAAT+TGG + chr7_1:56403546-56403565 Msa1025630:CDS 35.0%
GGGCTATATCATATGGAATT+GGG + chr7_1:56403547-56403566 Msa1025630:CDS 35.0%
TAAAATTGGTCAGCAAACAC+CGG - chr7_1:56403683-56403702 None:intergenic 35.0%
! TATGTTCTTTTGCTCCTACA+GGG - chr7_1:56403745-56403764 None:intergenic 35.0%
! TTATGTTCTTTTGCTCCTAC+AGG - chr7_1:56403746-56403765 None:intergenic 35.0%
! TAAGGCTGTGAAGATTTTGA+TGG + chr7_1:56403817-56403836 Msa1025630:CDS 35.0%
!! AAGGCTGTGAAGATTTTGAT+GGG + chr7_1:56403818-56403837 Msa1025630:CDS 35.0%
! TTGAAGAAATCTAAGGCACT+TGG + chr7_1:56403968-56403987 Msa1025630:CDS 35.0%
!!! TTTTTGGAACCTTGAAGCAT+TGG - chr7_1:56402655-56402674 None:intergenic 35.0%
! ACCAAGAATTTCAAGTGAAG+TGG - chr7_1:56402784-56402803 None:intergenic 35.0%
ATATCAGAGACTATGCAATC+TGG - chr7_1:56402870-56402889 None:intergenic 35.0%
TTCTTTGCATGTAACCAATC+AGG - chr7_1:56403089-56403108 None:intergenic 35.0%
! TTCATGCATTGGTCCAAAAT+AGG - chr7_1:56403123-56403142 None:intergenic 35.0%
! CTTTTCTCTGATTCATGCAT+TGG - chr7_1:56403134-56403153 None:intergenic 35.0%
GTTAATGAGAAAAAGGCCAA+TGG + chr7_1:56403275-56403294 Msa1025630:CDS 35.0%
TAATGAGAAAAAGGCCAATG+GGG + chr7_1:56403277-56403296 Msa1025630:CDS 35.0%
! ATTTCTACAAGTTGAGCATG+AGG - chr7_1:56403407-56403426 None:intergenic 35.0%
AACTTGTAGAAATTGCGCAT+GGG + chr7_1:56403414-56403433 Msa1025630:CDS 35.0%
GATAAAGATGAAGATGGAGA+TGG + chr7_1:56403482-56403501 Msa1025630:CDS 35.0%
TCCTGCAAGAATTTGAGAAA+AGG + chr7_1:56403507-56403526 Msa1025630:CDS 35.0%
! TCCTTTTCTCAAATTCTTGC+AGG - chr7_1:56403511-56403530 None:intergenic 35.0%
GCAAAAAGGGCTATATCATA+TGG + chr7_1:56403540-56403559 Msa1025630:CDS 35.0%
AGGGCTATATCATATGGAAT+TGG + chr7_1:56403546-56403565 Msa1025630:CDS 35.0%
GGGCTATATCATATGGAATT+GGG + chr7_1:56403547-56403566 Msa1025630:CDS 35.0%
TAAAATTGGTCAGCAAACAC+CGG - chr7_1:56403683-56403702 None:intergenic 35.0%
! TATGTTCTTTTGCTCCTACA+GGG - chr7_1:56403745-56403764 None:intergenic 35.0%
! TTATGTTCTTTTGCTCCTAC+AGG - chr7_1:56403746-56403765 None:intergenic 35.0%
! TAAGGCTGTGAAGATTTTGA+TGG + chr7_1:56403817-56403836 Msa1025630:CDS 35.0%
!! AAGGCTGTGAAGATTTTGAT+GGG + chr7_1:56403818-56403837 Msa1025630:CDS 35.0%
! TTGAAGAAATCTAAGGCACT+TGG + chr7_1:56403968-56403987 Msa1025630:CDS 35.0%
! GTCTTGCTGTGTCAATCATA+GGG - chr7_1:56402587-56402606 None:intergenic 40.0%
! AGTCTTGCTGTGTCAATCAT+AGG - chr7_1:56402588-56402607 None:intergenic 40.0%
GCAAGACTATTTGCAAAGCA+TGG + chr7_1:56402600-56402619 Msa1025630:CDS 40.0%
ATTGGCATGTGTAGTGATGA+TGG - chr7_1:56402637-56402656 None:intergenic 40.0%
ATAGACACTGACATCAGTTC+AGG + chr7_1:56402678-56402697 Msa1025630:CDS 40.0%
! TCGTGTTTTCAATACCGTCA+GGG - chr7_1:56402755-56402774 None:intergenic 40.0%
! TTCGTGTTTTCAATACCGTC+AGG - chr7_1:56402756-56402775 None:intergenic 40.0%
GCCACTTCACTTGAAATTCT+TGG + chr7_1:56402780-56402799 Msa1025630:CDS 40.0%
TCTCTGATATGATGTATCCG+TGG + chr7_1:56402880-56402899 Msa1025630:CDS 40.0%
CATTAAATGGATGGCACAGT+TGG - chr7_1:56402970-56402989 None:intergenic 40.0%
GGAGTCATCTCAATTGTATG+AGG - chr7_1:56403056-56403075 None:intergenic 40.0%
TACAATTGAGATGACTCCTC+TGG + chr7_1:56403058-56403077 Msa1025630:CDS 40.0%
CTACAATGGGGATCAAATCT+TGG + chr7_1:56403219-56403238 Msa1025630:CDS 40.0%
TTGTTGATCCAAGCTGAAAC+TGG - chr7_1:56403254-56403273 None:intergenic 40.0%
AGTTTCAGCTTGGATCAACA+AGG + chr7_1:56403253-56403272 Msa1025630:CDS 40.0%
AATGAGAAAAAGGCCAATGG+GGG + chr7_1:56403278-56403297 Msa1025630:CDS 40.0%
AACTTGCGAAAGAGGAAGAA+TGG + chr7_1:56403312-56403331 Msa1025630:CDS 40.0%
AAGAGGAAGAATGGCTAGAT+TGG + chr7_1:56403321-56403340 Msa1025630:CDS 40.0%
!!! TATGTTTTGGCAGCCATACT+AGG + chr7_1:56403378-56403397 Msa1025630:CDS 40.0%
CAACTTGTAGAAATTGCGCA+TGG + chr7_1:56403413-56403432 Msa1025630:CDS 40.0%
TGTTCCAATATCAACAGCTG+TGG - chr7_1:56403575-56403594 None:intergenic 40.0%
GAGAAGGGAAGAGATAGTTA+AGG + chr7_1:56403799-56403818 Msa1025630:CDS 40.0%
ACCAAGAGAGCAAAGAAATG+AGG + chr7_1:56403846-56403865 Msa1025630:CDS 40.0%
TCCTCATTTCTTTGCTCTCT+TGG - chr7_1:56403850-56403869 None:intergenic 40.0%
AGGATGAGAGCAAAGAAACT+TGG + chr7_1:56403866-56403885 Msa1025630:CDS 40.0%
! GTCTTGCTGTGTCAATCATA+GGG - chr7_1:56402587-56402606 None:intergenic 40.0%
! AGTCTTGCTGTGTCAATCAT+AGG - chr7_1:56402588-56402607 None:intergenic 40.0%
GCAAGACTATTTGCAAAGCA+TGG + chr7_1:56402600-56402619 Msa1025630:CDS 40.0%
ATTGGCATGTGTAGTGATGA+TGG - chr7_1:56402637-56402656 None:intergenic 40.0%
ATAGACACTGACATCAGTTC+AGG + chr7_1:56402678-56402697 Msa1025630:CDS 40.0%
! TCGTGTTTTCAATACCGTCA+GGG - chr7_1:56402755-56402774 None:intergenic 40.0%
! TTCGTGTTTTCAATACCGTC+AGG - chr7_1:56402756-56402775 None:intergenic 40.0%
GCCACTTCACTTGAAATTCT+TGG + chr7_1:56402780-56402799 Msa1025630:CDS 40.0%
TCTCTGATATGATGTATCCG+TGG + chr7_1:56402880-56402899 Msa1025630:CDS 40.0%
CATTAAATGGATGGCACAGT+TGG - chr7_1:56402970-56402989 None:intergenic 40.0%
GGAGTCATCTCAATTGTATG+AGG - chr7_1:56403056-56403075 None:intergenic 40.0%
TACAATTGAGATGACTCCTC+TGG + chr7_1:56403058-56403077 Msa1025630:CDS 40.0%
CTACAATGGGGATCAAATCT+TGG + chr7_1:56403219-56403238 Msa1025630:CDS 40.0%
TTGTTGATCCAAGCTGAAAC+TGG - chr7_1:56403254-56403273 None:intergenic 40.0%
AGTTTCAGCTTGGATCAACA+AGG + chr7_1:56403253-56403272 Msa1025630:CDS 40.0%
AATGAGAAAAAGGCCAATGG+GGG + chr7_1:56403278-56403297 Msa1025630:CDS 40.0%
AACTTGCGAAAGAGGAAGAA+TGG + chr7_1:56403312-56403331 Msa1025630:CDS 40.0%
AAGAGGAAGAATGGCTAGAT+TGG + chr7_1:56403321-56403340 Msa1025630:CDS 40.0%
!!! TATGTTTTGGCAGCCATACT+AGG + chr7_1:56403378-56403397 Msa1025630:CDS 40.0%
CAACTTGTAGAAATTGCGCA+TGG + chr7_1:56403413-56403432 Msa1025630:CDS 40.0%
TGTTCCAATATCAACAGCTG+TGG - chr7_1:56403575-56403594 None:intergenic 40.0%
GAGAAGGGAAGAGATAGTTA+AGG + chr7_1:56403799-56403818 Msa1025630:CDS 40.0%
ACCAAGAGAGCAAAGAAATG+AGG + chr7_1:56403846-56403865 Msa1025630:CDS 40.0%
TCCTCATTTCTTTGCTCTCT+TGG - chr7_1:56403850-56403869 None:intergenic 40.0%
AGGATGAGAGCAAAGAAACT+TGG + chr7_1:56403866-56403885 Msa1025630:CDS 40.0%
TTTCTTCCATTTCCCTCAGC+TGG + chr7_1:56402552-56402571 Msa1025630:CDS 45.0%
TTCTTCCATTTCCCTCAGCT+GGG + chr7_1:56402553-56402572 Msa1025630:CDS 45.0%
CTACACATGCCAATGCTTCA+AGG + chr7_1:56402643-56402662 Msa1025630:CDS 45.0%
TCAAGGAGTAAGGATGCTTC+AGG + chr7_1:56402812-56402831 Msa1025630:CDS 45.0%
TATGATGTATCCGTGGACAG+TGG + chr7_1:56402887-56402906 Msa1025630:CDS 45.0%
AACCAATCAGGAACTTCCAG+AGG - chr7_1:56403077-56403096 None:intergenic 45.0%
CATTGGTCCAAAATAGGCAG+CGG - chr7_1:56403117-56403136 None:intergenic 45.0%
GGGATCAAATCTTGGAGTGT+AGG + chr7_1:56403227-56403246 Msa1025630:CDS 45.0%
CATAGAGGAACTTGCGAAAG+AGG + chr7_1:56403304-56403323 Msa1025630:CDS 45.0%
GAGCATGAGGAAACCTAGTA+TGG - chr7_1:56403394-56403413 None:intergenic 45.0%
ATATTGGAACACCCTGCAAC+CGG + chr7_1:56403584-56403603 Msa1025630:CDS 45.0%
ACAATGAGTCACAATCCCTC+CGG - chr7_1:56403606-56403625 None:intergenic 45.0%
GGATTGTGACTCATTGTGGT+TGG + chr7_1:56403609-56403628 Msa1025630:CDS 45.0%
! CTGGTTTGCCAATGATTACG+TGG + chr7_1:56403657-56403676 Msa1025630:CDS 45.0%
TTTGCCAATGATTACGTGGC+CGG + chr7_1:56403661-56403680 Msa1025630:CDS 45.0%
TTGAAGATAGGGATCCCTGT+AGG + chr7_1:56403728-56403747 Msa1025630:CDS 45.0%
ATGCAGAGAAAGTGGTGAGA+AGG + chr7_1:56403783-56403802 Msa1025630:CDS 45.0%
TGCAGAGAAAGTGGTGAGAA+GGG + chr7_1:56403784-56403803 Msa1025630:CDS 45.0%
ACCTTCCTCTATAGTCCTCT+TGG - chr7_1:56403900-56403919 None:intergenic 45.0%
AAGAGGACTATAGAGGAAGG+TGG + chr7_1:56403899-56403918 Msa1025630:CDS 45.0%
TTTCTTCCATTTCCCTCAGC+TGG + chr7_1:56402552-56402571 Msa1025630:CDS 45.0%
TTCTTCCATTTCCCTCAGCT+GGG + chr7_1:56402553-56402572 Msa1025630:CDS 45.0%
CTACACATGCCAATGCTTCA+AGG + chr7_1:56402643-56402662 Msa1025630:CDS 45.0%
TCAAGGAGTAAGGATGCTTC+AGG + chr7_1:56402812-56402831 Msa1025630:CDS 45.0%
TATGATGTATCCGTGGACAG+TGG + chr7_1:56402887-56402906 Msa1025630:CDS 45.0%
AACCAATCAGGAACTTCCAG+AGG - chr7_1:56403077-56403096 None:intergenic 45.0%
CATTGGTCCAAAATAGGCAG+CGG - chr7_1:56403117-56403136 None:intergenic 45.0%
GGGATCAAATCTTGGAGTGT+AGG + chr7_1:56403227-56403246 Msa1025630:CDS 45.0%
CATAGAGGAACTTGCGAAAG+AGG + chr7_1:56403304-56403323 Msa1025630:CDS 45.0%
GAGCATGAGGAAACCTAGTA+TGG - chr7_1:56403394-56403413 None:intergenic 45.0%
ATATTGGAACACCCTGCAAC+CGG + chr7_1:56403584-56403603 Msa1025630:CDS 45.0%
ACAATGAGTCACAATCCCTC+CGG - chr7_1:56403606-56403625 None:intergenic 45.0%
GGATTGTGACTCATTGTGGT+TGG + chr7_1:56403609-56403628 Msa1025630:CDS 45.0%
! CTGGTTTGCCAATGATTACG+TGG + chr7_1:56403657-56403676 Msa1025630:CDS 45.0%
TTTGCCAATGATTACGTGGC+CGG + chr7_1:56403661-56403680 Msa1025630:CDS 45.0%
TTGAAGATAGGGATCCCTGT+AGG + chr7_1:56403728-56403747 Msa1025630:CDS 45.0%
ATGCAGAGAAAGTGGTGAGA+AGG + chr7_1:56403783-56403802 Msa1025630:CDS 45.0%
TGCAGAGAAAGTGGTGAGAA+GGG + chr7_1:56403784-56403803 Msa1025630:CDS 45.0%
ACCTTCCTCTATAGTCCTCT+TGG - chr7_1:56403900-56403919 None:intergenic 45.0%
AAGAGGACTATAGAGGAAGG+TGG + chr7_1:56403899-56403918 Msa1025630:CDS 45.0%
ATATGCCCAGCTGAGGGAAA+TGG - chr7_1:56402561-56402580 None:intergenic 50.0%
CAGTTCCCTTCAGCTCAAGT+TGG + chr7_1:56402726-56402745 Msa1025630:CDS 50.0%
GGAGACCAACTTGAGCTGAA+GGG - chr7_1:56402734-56402753 None:intergenic 50.0%
GTGGAAGCAGCTGCAAAACT+AGG + chr7_1:56402906-56402925 Msa1025630:CDS 50.0%
GGATGGCACAGTTGGAGAAT+TGG - chr7_1:56402962-56402981 None:intergenic 50.0%
! CTCCTCTGGAAGTTCCTGAT+TGG + chr7_1:56403072-56403091 Msa1025630:CDS 50.0%
! AATCCTGCCGCTGCCTATTT+TGG + chr7_1:56403107-56403126 Msa1025630:CDS 50.0%
GTGTAGGACCAGTTTCAGCT+TGG + chr7_1:56403243-56403262 Msa1025630:CDS 50.0%
TTCCTCTATGTGTCCCCCAT+TGG - chr7_1:56403294-56403313 None:intergenic 50.0%
GCGCATGGGCTTGAAAAATC+AGG + chr7_1:56403428-56403447 Msa1025630:CDS 50.0%
GGCACCACAGCTGTTGATAT+TGG + chr7_1:56403568-56403587 Msa1025630:CDS 50.0%
GGAGGGATTGTGACTCATTG+TGG + chr7_1:56403605-56403624 Msa1025630:CDS 50.0%
AACACCGGCCACGTAATCAT+TGG - chr7_1:56403668-56403687 None:intergenic 50.0%
!! AACTTGGTGATGCTGCCAAG+AGG + chr7_1:56403882-56403901 Msa1025630:CDS 50.0%
TGCTGCCAAGAGGACTATAG+AGG + chr7_1:56403892-56403911 Msa1025630:CDS 50.0%
GCCAAGAGGACTATAGAGGA+AGG + chr7_1:56403896-56403915 Msa1025630:CDS 50.0%
ATATGCCCAGCTGAGGGAAA+TGG - chr7_1:56402561-56402580 None:intergenic 50.0%
CAGTTCCCTTCAGCTCAAGT+TGG + chr7_1:56402726-56402745 Msa1025630:CDS 50.0%
GGAGACCAACTTGAGCTGAA+GGG - chr7_1:56402734-56402753 None:intergenic 50.0%
GTGGAAGCAGCTGCAAAACT+AGG + chr7_1:56402906-56402925 Msa1025630:CDS 50.0%
GGATGGCACAGTTGGAGAAT+TGG - chr7_1:56402962-56402981 None:intergenic 50.0%
! CTCCTCTGGAAGTTCCTGAT+TGG + chr7_1:56403072-56403091 Msa1025630:CDS 50.0%
! AATCCTGCCGCTGCCTATTT+TGG + chr7_1:56403107-56403126 Msa1025630:CDS 50.0%
GTGTAGGACCAGTTTCAGCT+TGG + chr7_1:56403243-56403262 Msa1025630:CDS 50.0%
TTCCTCTATGTGTCCCCCAT+TGG - chr7_1:56403294-56403313 None:intergenic 50.0%
GCGCATGGGCTTGAAAAATC+AGG + chr7_1:56403428-56403447 Msa1025630:CDS 50.0%
GGCACCACAGCTGTTGATAT+TGG + chr7_1:56403568-56403587 Msa1025630:CDS 50.0%
GGAGGGATTGTGACTCATTG+TGG + chr7_1:56403605-56403624 Msa1025630:CDS 50.0%
AACACCGGCCACGTAATCAT+TGG - chr7_1:56403668-56403687 None:intergenic 50.0%
!! AACTTGGTGATGCTGCCAAG+AGG + chr7_1:56403882-56403901 Msa1025630:CDS 50.0%
TGCTGCCAAGAGGACTATAG+AGG + chr7_1:56403892-56403911 Msa1025630:CDS 50.0%
GCCAAGAGGACTATAGAGGA+AGG + chr7_1:56403896-56403915 Msa1025630:CDS 50.0%
GGGTTCATATGCCCAGCTGA+GGG - chr7_1:56402567-56402586 None:intergenic 55.0%
AGGGTTCATATGCCCAGCTG+AGG - chr7_1:56402568-56402587 None:intergenic 55.0%
GGGAGACCAACTTGAGCTGA+AGG - chr7_1:56402735-56402754 None:intergenic 55.0%
!! GCTCAAGTTGGTCTCCCTGA+CGG + chr7_1:56402738-56402757 Msa1025630:CDS 55.0%
TCACAATCCCTCCGGTTGCA+GGG - chr7_1:56403598-56403617 None:intergenic 55.0%
GGGTTCATATGCCCAGCTGA+GGG - chr7_1:56402567-56402586 None:intergenic 55.0%
AGGGTTCATATGCCCAGCTG+AGG - chr7_1:56402568-56402587 None:intergenic 55.0%
GGGAGACCAACTTGAGCTGA+AGG - chr7_1:56402735-56402754 None:intergenic 55.0%
!! GCTCAAGTTGGTCTCCCTGA+CGG + chr7_1:56402738-56402757 Msa1025630:CDS 55.0%
TCACAATCCCTCCGGTTGCA+GGG - chr7_1:56403598-56403617 None:intergenic 55.0%
GCAGCTGCTTCCACTGTCCA+CGG - chr7_1:56402900-56402919 None:intergenic 60.0%
GGTCCAAAATAGGCAGCGGC+AGG - chr7_1:56403113-56403132 None:intergenic 60.0%
GGCCAATGGGGGACACATAG+AGG + chr7_1:56403289-56403308 Msa1025630:CDS 60.0%
TTGGAACACCCTGCAACCGG+AGG + chr7_1:56403587-56403606 Msa1025630:CDS 60.0%
TGGAACACCCTGCAACCGGA+GGG + chr7_1:56403588-56403607 Msa1025630:CDS 60.0%
GTCACAATCCCTCCGGTTGC+AGG - chr7_1:56403599-56403618 None:intergenic 60.0%
GCAGCTGCTTCCACTGTCCA+CGG - chr7_1:56402900-56402919 None:intergenic 60.0%
GGTCCAAAATAGGCAGCGGC+AGG - chr7_1:56403113-56403132 None:intergenic 60.0%
GGCCAATGGGGGACACATAG+AGG + chr7_1:56403289-56403308 Msa1025630:CDS 60.0%
TTGGAACACCCTGCAACCGG+AGG + chr7_1:56403587-56403606 Msa1025630:CDS 60.0%
TGGAACACCCTGCAACCGGA+GGG + chr7_1:56403588-56403607 Msa1025630:CDS 60.0%
GTCACAATCCCTCCGGTTGC+AGG - chr7_1:56403599-56403618 None:intergenic 60.0%
Chromosome Type Strat End Strand Name
chr7_1 gene 56402513 56404006 56402513 ID=Msa1025630;Name=Msa1025630
chr7_1 mRNA 56402513 56404006 56402513 ID=Msa1025630-mRNA-1;Parent=Msa1025630;Name=Msa1025630-mRNA-1;_AED=0.29;_eAED=0.29;_QI=0|-1|0|1|-1|1|1|0|497
chr7_1 exon 56402513 56404006 56402513 ID=Msa1025630-mRNA-1:exon:11297;Parent=Msa1025630-mRNA-1
chr7_1 CDS 56402513 56404006 56402513 ID=Msa1025630-mRNA-1:cds;Parent=Msa1025630-mRNA-1
Gene Sequence

>Msa1025630

ATGGAGTCTCAACAATCCCATAACCAACTTCATGTTGTTTTTCTTCCATTTCCCTCAGCTGGGCATATGAACCCTATGATTGACACAGCAAGACTATTTGCAAAGCATGGTGTTAATGTTACCATCATCACTACACATGCCAATGCTTCAAGGTTCCAAAAATCAATAGACACTGACATCAGTTCAGGATACTCCATCAAAACTCAACTTATTCAGTTCCCTTCAGCTCAAGTTGGTCTCCCTGACGGTATTGAAAACACGAACGATGCCACTTCACTTGAAATTCTTGGTAAAATCATTCAAGGAGTAAGGATGCTTCAGGAATCTATTGAAGTTCTGTTAAAAGAAGTTCAACCAGATTGCATAGTCTCTGATATGATGTATCCGTGGACAGTGGAAGCAGCTGCAAAACTAGGTATTCCAAGAATTCATTATTACATCACAAGCCAATTCTCCAACTGTGCCATCCATTTAATGATGAAGTATAGACCTCATGATAATTTAGTTTCTGATACACAGAAATTTACAATTCAAGGTTTGCCTCATACAATTGAGATGACTCCTCTGGAAGTTCCTGATTGGTTACATGCAAAGAATCCTGCCGCTGCCTATTTTGGACCAATGCATGAATCAGAGAAAAGAAGTTATGGAACACTATACAACAGTTTTCATGAACTGGAAAGTGATTATGAAAAACTTAGTAAGACTACAATGGGGATCAAATCTTGGAGTGTAGGACCAGTTTCAGCTTGGATCAACAAGGTTAATGAGAAAAAGGCCAATGGGGGACACATAGAGGAACTTGCGAAAGAGGAAGAATGGCTAGATTGGCTTAACTCAAAGCAAAATGAGTCTGTATTGTATGTATGTTTTGGCAGCCATACTAGGTTTCCTCATGCTCAACTTGTAGAAATTGCGCATGGGCTTGAAAAATCAGGTCAAAATTTTATCTGGGTTGTAAAAAAAAATGATAAAGATGAAGATGGAGATGGTTTCCTGCAAGAATTTGAGAAAAGGATGAAAGAAAGCAAAAAGGGCTATATCATATGGAATTGGGCACCACAGCTGTTGATATTGGAACACCCTGCAACCGGAGGGATTGTGACTCATTGTGGTTGGAACTCAACTATTGAAAGCATAAATGCTGGTTTGCCAATGATTACGTGGCCGGTGTTTGCTGACCAATTTTACAATGAGAAGTTGCTTGTTGATGTTTTGAAGATAGGGATCCCTGTAGGAGCAAAAGAACATAATTTATGGGCTAACATTAATGCAGAGAAAGTGGTGAGAAGGGAAGAGATAGTTAAGGCTGTGAAGATTTTGATGGGAAGTGACCAAGAGAGCAAAGAAATGAGGATGAGAGCAAAGAAACTTGGTGATGCTGCCAAGAGGACTATAGAGGAAGGTGGTGATTCTTACAACAACTTGATTCAGTTGATTGATGAGCTGAAATCATTGAAGAAATCTAAGGCACTTGGTGAGAAATCAGATTAG

Protein sequence

>Msa1025630

MESQQSHNQLHVVFLPFPSAGHMNPMIDTARLFAKHGVNVTIITTHANASRFQKSIDTDISSGYSIKTQLIQFPSAQVGLPDGIENTNDATSLEILGKIIQGVRMLQESIEVLLKEVQPDCIVSDMMYPWTVEAAAKLGIPRIHYYITSQFSNCAIHLMMKYRPHDNLVSDTQKFTIQGLPHTIEMTPLEVPDWLHAKNPAAAYFGPMHESEKRSYGTLYNSFHELESDYEKLSKTTMGIKSWSVGPVSAWINKVNEKKANGGHIEELAKEEEWLDWLNSKQNESVLYVCFGSHTRFPHAQLVEIAHGLEKSGQNFIWVVKKNDKDEDGDGFLQEFEKRMKESKKGYIIWNWAPQLLILEHPATGGIVTHCGWNSTIESINAGLPMITWPVFADQFYNEKLLVDVLKIGIPVGAKEHNLWANINAEKVVRREEIVKAVKILMGSDQESKEMRMRAKKLGDAAKRTIEEGGDSYNNLIQLIDELKSLKKSKALGEKSD*