Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1400210 | XP_003591383.1 | 91.781 | 365 | 7 | 1 | 1 | 342 | 1 | 365 | 0.0 | 683 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1400210 | G7ICW3 | 91.781 | 365 | 7 | 1 | 1 | 342 | 1 | 365 | 0.0 | 683 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0033960 | Msa1400210 | 0.900808 | 5.057153e-78 | -8.615850e-47 |
| Msa0034020 | Msa1400210 | 0.952021 | 5.925337e-110 | -8.615850e-47 |
| Msa0128040 | Msa1400210 | 0.809056 | 2.284543e-50 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1400210 | MtrunA17_Chr1g0194501 | 91.781 | 365 | 7 | 1 | 1 | 342 | 1 | 365 | 0.0 | 683 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1400210 | AT3G62370.1 | 62.953 | 359 | 110 | 3 | 4 | 341 | 3 | 359 | 1.18e-171 | 481 |
Find 113 sgRNAs with CRISPR-Local
Find 522 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| GCTATTCCGGGACGGCTTTA+TGG | 0.170463 | tig0022428:+33253 | Msa1400210:CDS |
| CTGTTTGATACACTATTTAA+AGG | 0.204813 | tig0022428:-37765 | None:intergenic |
| CGAGTTTATATAAGTGGATT+TGG | 0.212359 | tig0022428:-30513 | None:intergenic |
| CTCTAGGCCTTTGAGGACTA+TGG | 0.252101 | tig0022428:+36822 | Msa1400210:CDS |
| TTCTTTCTGCTTCAAGTTGA+TGG | 0.258059 | tig0022428:+30974 | Msa1400210:CDS |
| GTTGCACTTATGTTTCAAAT+TGG | 0.278592 | tig0022428:+31827 | Msa1400210:CDS |
| GGCACTGGTCCTTCAGGTTC+TGG | 0.288724 | tig0022428:+33490 | Msa1400210:CDS |
| TTCAATTGGAAATGCTATTC+CGG | 0.289510 | tig0022428:+33240 | Msa1400210:CDS |
| GAGAACCCTTATGCAGAAAA+TGG | 0.296262 | tig0022428:+36772 | Msa1400210:CDS |
| TTGGATGGCACTGGTCCTTC+AGG | 0.301058 | tig0022428:+33484 | Msa1400210:CDS |
| TTCATACAGGTTTGGCCATT+TGG | 0.305048 | tig0022428:+33426 | Msa1400210:intron |
| GTTCAATAGTCCAAGTATAA+TGG | 0.308197 | tig0022428:+37932 | Msa1400210:three_prime_UTR |
| TGTATCAAACAGCTTGAGTT+TGG | 0.320319 | tig0022428:+37776 | Msa1400210:three_prime_UTR |
| AAGTGTAAAGAGAATGTAAA+AGG | 0.325253 | tig0022428:+30309 | Msa1400210:five_prime_UTR |
| CCCGGTGTTATTACACTTGA+TGG | 0.331253 | tig0022428:+30740 | Msa1400210:CDS |
| GTCAACTTCATGACCTTTGC+AGG | 0.335113 | tig0022428:-33206 | None:intergenic |
| CATTTACGATTGTACTATAT+AGG | 0.336446 | tig0022428:+37811 | Msa1400210:three_prime_UTR |
| GGTGATTATGCCTACTCTAA+TGG | 0.343433 | tig0022428:+30995 | Msa1400210:CDS |
| TGTCTGTGTTTGTGAGTTAT+CGG | 0.344354 | tig0022428:+37701 | Msa1400210:CDS |
| GCAAGATGTCTGTCGGATTC+TGG | 0.349571 | tig0022428:+37497 | Msa1400210:CDS |
| ACTACTCTGTTAACTGTGAT+TGG | 0.350378 | tig0022428:+37557 | Msa1400210:CDS |
| TCAATTGGAAATGCTATTCC+GGG | 0.355065 | tig0022428:+33241 | Msa1400210:CDS |
| GTATCTGCAGTGTGGATTCC+AGG | 0.373410 | tig0022428:-33461 | None:intergenic |
| GGTAAGCCATGGCACGGTTC+CGG | 0.376073 | tig0022428:+37532 | Msa1400210:CDS |
| GGTCCATGGAGCTGTGAAAC+CGG | 0.385078 | tig0022428:+30686 | Msa1400210:CDS |
| ATTTCCATCTCTATTGTCAA+TGG | 0.406014 | tig0022428:-33284 | None:intergenic |
| TTGAATTCTCTAGGCCTTTG+AGG | 0.408768 | tig0022428:+36815 | Msa1400210:CDS |
| AAGGTTCTCCATTGGAGTAA+AGG | 0.412113 | tig0022428:-37746 | None:intergenic |
| TTGTGTCTTGTTGCTAACTA+AGG | 0.417284 | tig0022428:-30286 | None:intergenic |
| AATAACACCGGGTTGAAATT+CGG | 0.421139 | tig0022428:-30729 | None:intergenic |
| GTATCAAACAGCTTGAGTTT+GGG | 0.423240 | tig0022428:+37777 | Msa1400210:three_prime_UTR |
| TGGAGTAAAGGCTACACTCT+TGG | 0.432096 | tig0022428:-37734 | None:intergenic |
| GGAGTAAAGGCTACACTCTT+GGG | 0.441900 | tig0022428:-37733 | None:intergenic |
| GTGATTATGCCTACTCTAAT+GGG | 0.442592 | tig0022428:+30996 | Msa1400210:CDS |
| GCAACTTACATTATGATAAG+AGG | 0.443186 | tig0022428:-31858 | None:intergenic |
| GAATCCACACTGCAGATACT+TGG | 0.443373 | tig0022428:+33465 | Msa1400210:CDS |
| GACTATGGATCATCTGCAAC+AGG | 0.447825 | tig0022428:+36837 | Msa1400210:CDS |
| TTGATGGTCATGCCGATGAT+TGG | 0.452530 | tig0022428:+30756 | Msa1400210:CDS |
| ATTTGGTTGATCTTTATGCC+TGG | 0.456544 | tig0022428:+33443 | Msa1400210:CDS |
| CTACTCTGTTAACTGTGATT+GGG | 0.458444 | tig0022428:+37558 | Msa1400210:CDS |
| TGCCATGGCTTACCATCTAC+TGG | 0.461844 | tig0022428:-37523 | None:intergenic |
| TTTCCATCTCTATTGTCAAT+GGG | 0.463067 | tig0022428:-33283 | None:intergenic |
| TTCCGGGACGGCTTTATGGC+GGG | 0.467885 | tig0022428:+33257 | Msa1400210:CDS |
| GGATTCTGGTATCCAGTAGA+TGG | 0.471064 | tig0022428:+37511 | Msa1400210:CDS |
| GTCTGTGTTTGTGAGTTATC+GGG | 0.479240 | tig0022428:+37702 | Msa1400210:CDS |
| ACTATTTAAAGGTTCTCCAT+TGG | 0.483409 | tig0022428:-37754 | None:intergenic |
| ATTTGATAGATCGCGATTTG+TGG | 0.483667 | tig0022428:-30479 | None:intergenic |
| GTGGCAAGGTAGATCACAAA+TGG | 0.484756 | tig0022428:+30240 | Msa1400210:five_prime_UTR |
| GTTTATTCACACGAAGAGTC+GGG | 0.494402 | tig0022428:+30665 | Msa1400210:CDS |
| AGATGGAACTCCATTATACT+TGG | 0.495141 | tig0022428:-37942 | None:intergenic |
| AAGGAAAATGCAACAAGTGC+TGG | 0.498184 | tig0022428:+30328 | Msa1400210:five_prime_UTR |
| GAGATGGAAATGGCGGTGAC+AGG | 0.505100 | tig0022428:+33296 | Msa1400210:CDS |
| ATTGACAATAGAGATGGAAA+TGG | 0.512303 | tig0022428:+33286 | Msa1400210:CDS |
| GAGTGTAGCCTTTACTCCAA+TGG | 0.521817 | tig0022428:+37738 | Msa1400210:CDS |
| CTGCTCTGAGATATATCAAT+CGG | 0.523134 | tig0022428:-37583 | None:intergenic |
| CACACGAAGAGTCGGGTCCA+TGG | 0.523429 | tig0022428:+30672 | Msa1400210:CDS |
| TTTGTTGATTGAACTTGAAG+TGG | 0.523706 | tig0022428:+30409 | Msa1400210:five_prime_UTR |
| TGTTTATTCACACGAAGAGT+CGG | 0.527511 | tig0022428:+30664 | Msa1400210:CDS |
| CAGGATGTGCAATTCACCAT+TGG | 0.528409 | tig0022428:+37466 | Msa1400210:intron |
| ATCAATGTCCTTCCAATCAT+CGG | 0.529350 | tig0022428:-30768 | None:intergenic |
| GTCCATGGAGCTGTGAAACC+GGG | 0.530304 | tig0022428:+30687 | Msa1400210:CDS |
| AGCAAGAAGAAGAGAGAAGT+GGG | 0.530565 | tig0022428:-30795 | None:intergenic |
| GATGATTGGAAGGACATTGA+TGG | 0.532585 | tig0022428:+30770 | Msa1400210:CDS |
| GACCCGGTTTCACAGCTCCA+TGG | 0.533933 | tig0022428:-30689 | None:intergenic |
| AGGCATAAAGATCAACCAAA+TGG | 0.542098 | tig0022428:-33441 | None:intergenic |
| GTTGATTGAACTTGAAGTGG+TGG | 0.542845 | tig0022428:+30412 | Msa1400210:five_prime_UTR |
| TTCCCGCCATAAAGCCGTCC+CGG | 0.550538 | tig0022428:-33259 | None:intergenic |
| TTCGTGTGAATAAACATCAT+AGG | 0.556825 | tig0022428:-30657 | None:intergenic |
| TTGAAACATAAGTGCAACAG+AGG | 0.557620 | tig0022428:-31822 | None:intergenic |
| ACTCAGCATCAAGTAGCTCA+TGG | 0.557960 | tig0022428:+37629 | Msa1400210:CDS |
| GATGCTGAAAATGAATTCAA+TGG | 0.562672 | tig0022428:+30827 | Msa1400210:CDS |
| TGCAGATACTTGGATGGCAC+TGG | 0.565255 | tig0022428:+33475 | Msa1400210:CDS |
| ATTCCGGGACGGCTTTATGG+CGG | 0.565691 | tig0022428:+33256 | Msa1400210:CDS |
| ATGATTGGAAGGACATTGAT+GGG | 0.569537 | tig0022428:+30771 | Msa1400210:CDS |
| CTTAATTGTTGTAAGATGGG+TGG | 0.570771 | tig0022428:+33148 | Msa1400210:intron |
| CTCAACATGAATCTCTGACC+CGG | 0.580275 | tig0022428:-30705 | None:intergenic |
| GATGTGCAATTCACCATTGG+CGG | 0.581517 | tig0022428:+37469 | Msa1400210:CDS |
| TGCACAAATAAGACCTGCAA+AGG | 0.582257 | tig0022428:+33193 | Msa1400210:CDS |
| CAAAGAAAGAAATACCTTCA+CGG | 0.582329 | tig0022428:-30861 | None:intergenic |
| CTTATGTTTCAAATTGGAGA+TGG | 0.582716 | tig0022428:+31833 | Msa1400210:CDS |
| CCACACTGCAGATACTTGGA+TGG | 0.585406 | tig0022428:+33469 | Msa1400210:CDS |
| TTCATTGAGTGGCAAGTCAG+TGG | 0.585865 | tig0022428:+37606 | Msa1400210:CDS |
| TGCAACAACTAAGCACAAGA+TGG | 0.588619 | tig0022428:-37959 | None:intergenic |
| AATCCCATTGACAATAGAGA+TGG | 0.588744 | tig0022428:+33280 | Msa1400210:CDS |
| GAGCAAGAAGAAGAGAGAAG+TGG | 0.590725 | tig0022428:-30796 | None:intergenic |
| CATCTTGCTTGATCCGCCAA+TGG | 0.594402 | tig0022428:-37482 | None:intergenic |
| CCATCAAGTGTAATAACACC+GGG | 0.594542 | tig0022428:-30740 | None:intergenic |
| ACCATCAAGTGTAATAACAC+CGG | 0.597071 | tig0022428:-30741 | None:intergenic |
| TTGTTGCAGAGTGTGCATGA+TGG | 0.598722 | tig0022428:+30941 | Msa1400210:intron |
| ACAGTTAACAGAGTAGTGTC+CGG | 0.602771 | tig0022428:-37551 | None:intergenic |
| GCAGGTCTTATTTGTGCACG+AGG | 0.611952 | tig0022428:-33188 | None:intergenic |
| GGATCAAGCAAGATGTCTGT+CGG | 0.616205 | tig0022428:+37490 | Msa1400210:CDS |
| TTGGAAATGCTATTCCGGGA+CGG | 0.622396 | tig0022428:+33245 | Msa1400210:CDS |
| TAGTGTCCGGAACCGTGCCA+TGG | 0.623740 | tig0022428:-37538 | None:intergenic |
| TGGTCATGCCGATGATTGGA+AGG | 0.627013 | tig0022428:+30760 | Msa1400210:CDS |
| GATGATTATGATGCATGAAG+TGG | 0.632238 | tig0022428:+30221 | None:intergenic |
| ATCCAGTAGATGGTAAGCCA+TGG | 0.634636 | tig0022428:+37521 | Msa1400210:CDS |
| GTTGAGTCCGAATTTCAACC+CGG | 0.640532 | tig0022428:+30722 | Msa1400210:CDS |
| TAGATCACAAATGGAATACG+TGG | 0.642073 | tig0022428:+30249 | Msa1400210:five_prime_UTR |
| AGATGATCCATAGTCCTCAA+AGG | 0.643096 | tig0022428:-36829 | None:intergenic |
| GACAATAGAGATGGAAATGG+CGG | 0.643121 | tig0022428:+33289 | Msa1400210:CDS |
| TCTCAGAGCAGTTCATTGAG+TGG | 0.649577 | tig0022428:+37595 | Msa1400210:CDS |
| GAAGCAGAAAGAAAATATCA+CGG | 0.656787 | tig0022428:-30964 | None:intergenic |
| GTAGATGGTAAGCCATGGCA+CGG | 0.658775 | tig0022428:+37526 | Msa1400210:CDS |
| CACATCTTACCCATTAGAGT+AGG | 0.661936 | tig0022428:-31005 | None:intergenic |
| AGATCACAAATGGAATACGT+GGG | 0.665653 | tig0022428:+30250 | Msa1400210:five_prime_UTR |
| TGAAACATAAGTGCAACAGA+GGG | 0.672670 | tig0022428:-31821 | None:intergenic |
| TTGTGCATACCAGAACCTGA+AGG | 0.682415 | tig0022428:-33499 | None:intergenic |
| CCATCCAAGTATCTGCAGTG+TGG | 0.694075 | tig0022428:-33469 | None:intergenic |
| GATCACAAATGGAATACGTG+GGG | 0.698603 | tig0022428:+30251 | Msa1400210:five_prime_UTR |
| TTGTAAGATGGGTGGCTGTG+AGG | 0.702871 | tig0022428:+33156 | Msa1400210:intron |
| TTATGATGCATGAAGTGGCA+AGG | 0.708279 | tig0022428:+30226 | Msa1400210:five_prime_UTR |
| GCTGAAAATGAATTCAATGG+CGG | 0.714687 | tig0022428:+30830 | Msa1400210:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | TTTTTTTAATTCTTTTAATG+AGG | - | tig0022428:32850-32869 | None:intergenic | 10.0% |
| !! | AAAATAAATTAAAATCAGTT+AGG | + | tig0022428:32866-32885 | Msa1400210:intron | 10.0% |
| !! | AAATAAATTAAAATCAGTTA+GGG | + | tig0022428:32867-32886 | Msa1400210:intron | 10.0% |
| !!! | ACATAACATTTTTTTTTTTA+TGG | + | tig0022428:35892-35911 | Msa1400210:intron | 10.0% |
| !!! | TTTTATGTTAAAGTATATTA+TGG | + | tig0022428:36582-36601 | Msa1400210:intron | 10.0% |
| !! | TCAAATAGAATTAAAAAATA+GGG | - | tig0022428:37870-37889 | None:intergenic | 10.0% |
| !! | TTCAAATAGAATTAAAAAAT+AGG | - | tig0022428:37871-37890 | None:intergenic | 10.0% |
| !!! | ATTTTTCTTTTTTAAAAAAC+TGG | + | tig0022428:38009-38028 | Msa1400210:three_prime_UTR | 10.0% |
| !!! | TTTAAGTTGTTTGATTTTTT+CGG | + | tig0022428:31104-31123 | Msa1400210:intron | 15.0% |
| !! | AAAATGTTGAATATATAAAG+AGG | + | tig0022428:31332-31351 | Msa1400210:intron | 15.0% |
| !!! | AAGTAATGATATTTTTATTG+AGG | + | tig0022428:31648-31667 | Msa1400210:intron | 15.0% |
| !!! | AGTAATGATATTTTTATTGA+GGG | + | tig0022428:31649-31668 | Msa1400210:intron | 15.0% |
| !! | ATTATTAAAACAACATAGAT+TGG | + | tig0022428:32031-32050 | Msa1400210:intron | 15.0% |
| !!! | TTTGACTTTATTTAATCTTT+TGG | + | tig0022428:32469-32488 | Msa1400210:intron | 15.0% |
| !!! | ATTTTTGTATAATCTGTTTT+AGG | + | tig0022428:32601-32620 | Msa1400210:intron | 15.0% |
| !!! | AAATAAGTTGAAACAATTTA+TGG | + | tig0022428:32691-32710 | Msa1400210:intron | 15.0% |
| !! | AATAAATTAAAATCAGTTAG+GGG | + | tig0022428:32868-32887 | Msa1400210:intron | 15.0% |
| !!! | AAAATGTATAAAACATTTTC+AGG | - | tig0022428:33871-33890 | None:intergenic | 15.0% |
| !!! | TGTTGTCTAATTTTTATTTT+AGG | + | tig0022428:35359-35378 | Msa1400210:intron | 15.0% |
| !!! | GTTGTCTAATTTTTATTTTA+GGG | + | tig0022428:35360-35379 | Msa1400210:intron | 15.0% |
| !! | AAAACATATTGTACATATAT+TGG | - | tig0022428:35802-35821 | None:intergenic | 15.0% |
| !!! | CAATTTTAATATCATATATG+GGG | - | tig0022428:36627-36646 | None:intergenic | 15.0% |
| !!! | CCAATTTTAATATCATATAT+GGG | - | tig0022428:36628-36647 | None:intergenic | 15.0% |
| !! | TTATTAATCATAATGAATTC+TGG | + | tig0022428:37022-37041 | Msa1400210:intron | 15.0% |
| !!! | ATTTTGTATTTCTGATATTA+TGG | + | tig0022428:37084-37103 | Msa1400210:intron | 15.0% |
| !! | TAAAAACGAGTTTATATAAG+TGG | - | tig0022428:30522-30541 | None:intergenic | 20.0% |
| !!! | TATTTAGTGGCTTAAAATTT+TGG | + | tig0022428:31364-31383 | Msa1400210:intron | 20.0% |
| !!! | ATTTAGTGGCTTAAAATTTT+GGG | + | tig0022428:31365-31384 | Msa1400210:intron | 20.0% |
| !! | ATATGATACTCTTAATAAGT+TGG | + | tig0022428:31737-31756 | Msa1400210:intron | 20.0% |
| !!! | TTCATGTTTTTCAAATCTAA+GGG | + | tig0022428:32253-32272 | Msa1400210:intron | 20.0% |
| !! | AGAATTTCTCTAACTTATTT+AGG | - | tig0022428:32771-32790 | None:intergenic | 20.0% |
| !! | AATAAGTTAGAGAAATTCTT+AGG | + | tig0022428:32772-32791 | Msa1400210:intron | 20.0% |
| !!! | TAATTATTTTAATGAGGTGT+TGG | + | tig0022428:32983-33002 | Msa1400210:intron | 20.0% |
| !!! | AATTATTTTAATGAGGTGTT+GGG | + | tig0022428:32984-33003 | Msa1400210:intron | 20.0% |
| !! | AAAGTTCTTTAGACTTAAAA+AGG | - | tig0022428:33687-33706 | None:intergenic | 20.0% |
| !!! | ATAACTATGCCTTTTATTTA+AGG | + | tig0022428:33798-33817 | Msa1400210:intron | 20.0% |
| !!! | TAACTATGCCTTTTATTTAA+GGG | + | tig0022428:33799-33818 | Msa1400210:intron | 20.0% |
| !! | ATAGAAAAGCAAAATGATAA+TGG | - | tig0022428:33894-33913 | None:intergenic | 20.0% |
| !!! | ATTTCTCTTATAGTTTTTCT+AGG | - | tig0022428:34204-34223 | None:intergenic | 20.0% |
| !!! | ATATGTCATTGTTTCTTATA+TGG | - | tig0022428:34365-34384 | None:intergenic | 20.0% |
| !! | AGGAAAAGATGAATTAATTA+AGG | + | tig0022428:34657-34676 | Msa1400210:intron | 20.0% |
| !! | TGTAAATTCATTATTCACAT+AGG | - | tig0022428:35065-35084 | None:intergenic | 20.0% |
| !!! | GATTTTGTGCATATAATTAT+TGG | + | tig0022428:35091-35110 | Msa1400210:intron | 20.0% |
| !!! | ATATGAAAGTATGAAACAAT+GGG | - | tig0022428:35166-35185 | None:intergenic | 20.0% |
| !! | AGCTTATATATCCAATTATA+TGG | - | tig0022428:35267-35286 | None:intergenic | 20.0% |
| !!! | TTTTCTTTTTGAACAGTAAA+AGG | - | tig0022428:35496-35515 | None:intergenic | 20.0% |
| !!! | CTGATTTTAGAATGAAATAT+TGG | + | tig0022428:35573-35592 | Msa1400210:intron | 20.0% |
| !!! | TTTTAGAATGAAATATTGGT+TGG | + | tig0022428:35577-35596 | Msa1400210:intron | 20.0% |
| !! | ATTGTTTACCTAATTCTATA+TGG | - | tig0022428:35635-35654 | None:intergenic | 20.0% |
| !! | GTATGAATATCATTAAGAAT+CGG | - | tig0022428:35696-35715 | None:intergenic | 20.0% |
| !! | TATGTTGAAAGATATTTCTT+TGG | - | tig0022428:35718-35737 | None:intergenic | 20.0% |
| !!! | TATATGTACAATATGTTTTC+TGG | + | tig0022428:35803-35822 | Msa1400210:intron | 20.0% |
| !! | ATTATAAAAGGAAATTCTTG+TGG | - | tig0022428:36267-36286 | None:intergenic | 20.0% |
| !! | CCCATATATGATATTAAAAT+TGG | + | tig0022428:36625-36644 | Msa1400210:intron | 20.0% |
| !!! | GCCAATTTTAATATCATATA+TGG | - | tig0022428:36629-36648 | None:intergenic | 20.0% |
| !!! | CATATTTTTTTGAATTCTCT+AGG | + | tig0022428:36806-36825 | Msa1400210:CDS | 20.0% |
| !! | AACTCAGTTAATTCAAAATA+GGG | - | tig0022428:36947-36966 | None:intergenic | 20.0% |
| !! | ATTATATTTGAGAGAACTTA+TGG | - | tig0022428:37305-37324 | None:intergenic | 20.0% |
| ! | AAGTGTAAAGAGAATGTAAA+AGG | + | tig0022428:30309-30328 | Msa1400210:five_prime_UTR | 25.0% |
| ! | ACTTGAATGTGAATAACAAA+AGG | - | tig0022428:30888-30907 | None:intergenic | 25.0% |
| !!! | TTTTTCGGTAATCATGTTAT+CGG | + | tig0022428:31119-31138 | Msa1400210:intron | 25.0% |
| !! | TTTTAAGCCACTAAATATAC+CGG | - | tig0022428:31361-31380 | None:intergenic | 25.0% |
| ! | TCTCAATGATTGATATTGTT+TGG | + | tig0022428:31470-31489 | Msa1400210:intron | 25.0% |
| ! | TATTCATAACAAATCATGAG+TGG | + | tig0022428:31494-31513 | Msa1400210:intron | 25.0% |
| !! | ATATCAACTCTTGATTTTAG+CGG | + | tig0022428:31522-31541 | Msa1400210:intron | 25.0% |
| ! | TACTTGGATCAATATAATAG+TGG | + | tig0022428:31564-31583 | Msa1400210:intron | 25.0% |
| !! | TACAAAAACACTCTCTAAAA+AGG | - | tig0022428:31988-32007 | None:intergenic | 25.0% |
| !!! | CTTCATGTTTTTCAAATCTA+AGG | + | tig0022428:32252-32271 | Msa1400210:intron | 25.0% |
| !!! | TCATGTTTTTCAAATCTAAG+GGG | + | tig0022428:32254-32273 | Msa1400210:intron | 25.0% |
| ! | AATAAGCTAAAAACAACTGA+TGG | - | tig0022428:32391-32410 | None:intergenic | 25.0% |
| !!! | TGTTTTTATATGCTATCATG+AGG | + | tig0022428:32659-32678 | Msa1400210:intron | 25.0% |
| !!! | AATTCTTTTAATGAGGTGTT+GGG | - | tig0022428:32843-32862 | None:intergenic | 25.0% |
| !! | TAATTCTTTTAATGAGGTGT+TGG | - | tig0022428:32844-32863 | None:intergenic | 25.0% |
| ! | TTGTCTTAATTGTTGTAAGA+TGG | + | tig0022428:33144-33163 | Msa1400210:intron | 25.0% |
| ! | TGTCTTAATTGTTGTAAGAT+GGG | + | tig0022428:33145-33164 | Msa1400210:intron | 25.0% |
| ! | ACAATTTATGATGACTATAG+TGG | + | tig0022428:33360-33379 | Msa1400210:intron | 25.0% |
| ! | ACAAATGTAACATCTTTAGT+TGG | + | tig0022428:33518-33537 | Msa1400210:intron | 25.0% |
| !! | AATAAAAGGCATAGTTATCA+AGG | - | tig0022428:33796-33815 | None:intergenic | 25.0% |
| ! | AAAGTAAAACAGAAAATACG+AGG | - | tig0022428:33938-33957 | None:intergenic | 25.0% |
| ! | TGATATCTTTCATTAGAGAT+AGG | + | tig0022428:33973-33992 | Msa1400210:intron | 25.0% |
| ! | TAATTAGTTGGATAGAGATA+TGG | + | tig0022428:34245-34264 | Msa1400210:intron | 25.0% |
| !! | AAATTTTAAATTGGGTGTGT+GGG | - | tig0022428:34547-34566 | None:intergenic | 25.0% |
| !! | AGTGGCACAAATTTTAAATT+GGG | - | tig0022428:34555-34574 | None:intergenic | 25.0% |
| !! | AAGTGGCACAAATTTTAAAT+TGG | - | tig0022428:34556-34575 | None:intergenic | 25.0% |
| ! | TTATCATCTTTATCCAAGTT+AGG | - | tig0022428:34761-34780 | None:intergenic | 25.0% |
| !! | AATTCCTTTATTTGTCTCAA+TGG | + | tig0022428:34894-34913 | Msa1400210:intron | 25.0% |
| !! | ATTCCTTTATTTGTCTCAAT+GGG | + | tig0022428:34895-34914 | Msa1400210:intron | 25.0% |
| !! | GTTTTGCAAAGATATAGAAA+AGG | - | tig0022428:35010-35029 | None:intergenic | 25.0% |
| ! | GCTGTTAATGTTTATGAATT+GGG | + | tig0022428:35126-35145 | Msa1400210:intron | 25.0% |
| !! | CATATGAAAGTATGAAACAA+TGG | - | tig0022428:35167-35186 | None:intergenic | 25.0% |
| ! | TACTTTCATATGATTTGAAG+TGG | + | tig0022428:35175-35194 | Msa1400210:intron | 25.0% |
| !! | ACTTTCATATGATTTGAAGT+GGG | + | tig0022428:35176-35195 | Msa1400210:intron | 25.0% |
| ! | GGAAATTATCAACAAATGAA+GGG | - | tig0022428:35334-35353 | None:intergenic | 25.0% |
| ! | AGGAAATTATCAACAAATGA+AGG | - | tig0022428:35335-35354 | None:intergenic | 25.0% |
| !!! | TCATTTGTTGATAATTTCCT+AGG | + | tig0022428:35335-35354 | Msa1400210:intron | 25.0% |
| ! | TAAAAATTAGACAACAACCT+AGG | - | tig0022428:35355-35374 | None:intergenic | 25.0% |
| ! | AAGATAGTTAAAATCAGCTT+CGG | - | tig0022428:35547-35566 | None:intergenic | 25.0% |
| !!! | TTTCATTCTAAAATCAGCTT+CGG | - | tig0022428:35570-35589 | None:intergenic | 25.0% |
| ! | TTTACCTAATTCTATATGGA+GGG | - | tig0022428:35631-35650 | None:intergenic | 25.0% |
| !!! | AAGTGGTATTTTTAAAACGT+TGG | - | tig0022428:35835-35854 | None:intergenic | 25.0% |
| !!! | TTTTAAAAATACCACTTTGC+TGG | + | tig0022428:35838-35857 | Msa1400210:intron | 25.0% |
| ! | TTTAAAAATACCACTTTGCT+GGG | + | tig0022428:35839-35858 | Msa1400210:intron | 25.0% |
| ! | TATGCTTAACATTCAATTCA+TGG | - | tig0022428:36028-36047 | None:intergenic | 25.0% |
| ! | TATAAATTATTGAAAGCAGC+AGG | - | tig0022428:36131-36150 | None:intergenic | 25.0% |
| !! | TTTATGGATCACTAAACTTT+TGG | - | tig0022428:36206-36225 | None:intergenic | 25.0% |
| ! | TCCAGAATAACTAAATGATA+GGG | - | tig0022428:36695-36714 | None:intergenic | 25.0% |
| ! | ATCCAGAATAACTAAATGAT+AGG | - | tig0022428:36696-36715 | None:intergenic | 25.0% |
| !! | TTTTTCCATTTTCTGCATAA+GGG | - | tig0022428:36780-36799 | None:intergenic | 25.0% |
| !!! | TTTTTTCCATTTTCTGCATA+AGG | - | tig0022428:36781-36800 | None:intergenic | 25.0% |
| ! | TTATGCAGAAAATGGAAAAA+AGG | + | tig0022428:36780-36799 | Msa1400210:CDS | 25.0% |
| ! | TATGCAGAAAATGGAAAAAA+GGG | + | tig0022428:36781-36800 | Msa1400210:CDS | 25.0% |
| ! | GAACTCAGTTAATTCAAAAT+AGG | - | tig0022428:36948-36967 | None:intergenic | 25.0% |
| !! | TTTTGAATTAACTGAGTTCT+TGG | + | tig0022428:36949-36968 | Msa1400210:intron | 25.0% |
| !!! | TGCGGTTTTTTTTATTTTTG+TGG | + | tig0022428:37254-37273 | Msa1400210:intron | 25.0% |
| ! | CTGTTTGATACACTATTTAA+AGG | - | tig0022428:37768-37787 | None:intergenic | 25.0% |
| ! | CATTTACGATTGTACTATAT+AGG | + | tig0022428:37811-37830 | Msa1400210:three_prime_UTR | 25.0% |
| ! | TTTGTTGATTGAACTTGAAG+TGG | + | tig0022428:30409-30428 | Msa1400210:five_prime_UTR | 30.0% |
| ! | CGAGTTTATATAAGTGGATT+TGG | - | tig0022428:30516-30535 | None:intergenic | 30.0% |
| TTCGTGTGAATAAACATCAT+AGG | - | tig0022428:30660-30679 | None:intergenic | 30.0% | |
| ! | TGAATTCATTTTCAGCATCA+GGG | - | tig0022428:30826-30845 | None:intergenic | 30.0% |
| ! | TTGAATTCATTTTCAGCATC+AGG | - | tig0022428:30827-30846 | None:intergenic | 30.0% |
| GATGCTGAAAATGAATTCAA+TGG | + | tig0022428:30827-30846 | Msa1400210:CDS | 30.0% | |
| CAAAGAAAGAAATACCTTCA+CGG | - | tig0022428:30864-30883 | None:intergenic | 30.0% | |
| GAAGCAGAAAGAAAATATCA+CGG | - | tig0022428:30967-30986 | None:intergenic | 30.0% | |
| AGCTCAATAAATCAAACTCA+TGG | - | tig0022428:31066-31085 | None:intergenic | 30.0% | |
| ! | ACCTATTTGATGACTAATCT+TGG | + | tig0022428:31154-31173 | Msa1400210:intron | 30.0% |
| ! | ACCAAGATTAGTCATCAAAT+AGG | - | tig0022428:31158-31177 | None:intergenic | 30.0% |
| ! | ATTTGATGACTAATCTTGGT+CGG | + | tig0022428:31158-31177 | Msa1400210:intron | 30.0% |
| TGAATATATAAAGAGGTGAC+CGG | + | tig0022428:31339-31358 | Msa1400210:intron | 30.0% | |
| TATCAACAACGGATATTACT+GGG | - | tig0022428:31446-31465 | None:intergenic | 30.0% | |
| TTATCAACAACGGATATTAC+TGG | - | tig0022428:31447-31466 | None:intergenic | 30.0% | |
| !! | CAATTTTGTTTCGTTCTACT+TGG | + | tig0022428:31548-31567 | Msa1400210:intron | 30.0% |
| !! | AGTTGGTGCTTTTAAAAAGT+TGG | + | tig0022428:31754-31773 | Msa1400210:intron | 30.0% |
| GTTGCACTTATGTTTCAAAT+TGG | + | tig0022428:31827-31846 | Msa1400210:CDS | 30.0% | |
| CTTATGTTTCAAATTGGAGA+TGG | + | tig0022428:31833-31852 | Msa1400210:CDS | 30.0% | |
| GCAACTTACATTATGATAAG+AGG | - | tig0022428:31861-31880 | None:intergenic | 30.0% | |
| ACTCAACAATGTATTCTTTG+AGG | + | tig0022428:31884-31903 | Msa1400210:intron | 30.0% | |
| CTCAACAATGTATTCTTTGA+GGG | + | tig0022428:31885-31904 | Msa1400210:intron | 30.0% | |
| !!! | AAGGAGGATATTTTAGGTTT+TGG | - | tig0022428:32081-32100 | None:intergenic | 30.0% |
| ! | GTATTGAAGGAGGATATTTT+AGG | - | tig0022428:32087-32106 | None:intergenic | 30.0% |
| AACTCAAAATGTATTGAAGG+AGG | - | tig0022428:32097-32116 | None:intergenic | 30.0% | |
| !!! | ATTTTGAGTTCCCTCAAATT+AGG | + | tig0022428:32107-32126 | Msa1400210:intron | 30.0% |
| !!! | TTTTGAGTTCCCTCAAATTA+GGG | + | tig0022428:32108-32127 | Msa1400210:intron | 30.0% |
| !! | AAGTTTTTGGGAATTTAGGA+GGG | - | tig0022428:32227-32246 | None:intergenic | 30.0% |
| !! | GATGAAGTTTTTGGGAATTT+AGG | - | tig0022428:32231-32250 | None:intergenic | 30.0% |
| GCATTTGGATAAACAACTTA+GGG | + | tig0022428:32276-32295 | Msa1400210:intron | 30.0% | |
| AAGTTATCTTGAAGAGCTTA+TGG | - | tig0022428:32415-32434 | None:intergenic | 30.0% | |
| ! | TGATTACCATAAGCACTTTT+TGG | - | tig0022428:32580-32599 | None:intergenic | 30.0% |
| AAATTAAAATCAGTTAGGGG+TGG | + | tig0022428:32871-32890 | Msa1400210:intron | 30.0% | |
| AGAGATCTTTCATAAAGATC+AGG | - | tig0022428:33102-33121 | None:intergenic | 30.0% | |
| ! | GACATTATGCACTTTTCAAT+TGG | + | tig0022428:33226-33245 | Msa1400210:CDS | 30.0% |
| TTCAATTGGAAATGCTATTC+CGG | + | tig0022428:33240-33259 | Msa1400210:CDS | 30.0% | |
| TTTCCATCTCTATTGTCAAT+GGG | - | tig0022428:33286-33305 | None:intergenic | 30.0% | |
| ATTTCCATCTCTATTGTCAA+TGG | - | tig0022428:33287-33306 | None:intergenic | 30.0% | |
| ATTGACAATAGAGATGGAAA+TGG | + | tig0022428:33286-33305 | Msa1400210:CDS | 30.0% | |
| CTCCTTAACTTTAACCATAT+CGG | + | tig0022428:33334-33353 | Msa1400210:intron | 30.0% | |
| TTTCCTATAATCGTTCATAC+AGG | + | tig0022428:33413-33432 | Msa1400210:intron | 30.0% | |
| AAACCTGTATGAACGATTAT+AGG | - | tig0022428:33419-33438 | None:intergenic | 30.0% | |
| TATAATCGTTCATACAGGTT+TGG | + | tig0022428:33418-33437 | Msa1400210:intron | 30.0% | |
| !! | TATGCCTTTTATTTAAGGGT+TGG | + | tig0022428:33803-33822 | Msa1400210:intron | 30.0% |
| !!! | AACATTTTCAGGTGAGAAAT+GGG | - | tig0022428:33860-33879 | None:intergenic | 30.0% |
| !!! | AAACATTTTCAGGTGAGAAA+TGG | - | tig0022428:33861-33880 | None:intergenic | 30.0% |
| ATCTAATCTACTTCCTACTA+GGG | - | tig0022428:34147-34166 | None:intergenic | 30.0% | |
| AGATCTAGCGATTAATTAGT+TGG | + | tig0022428:34233-34252 | Msa1400210:intron | 30.0% | |
| !!! | ATTGTTTTAAACCTTGCATG+AGG | + | tig0022428:34383-34402 | Msa1400210:intron | 30.0% |
| ! | AATTTTAAATTGGGTGTGTG+GGG | - | tig0022428:34546-34565 | None:intergenic | 30.0% |
| ! | CAAATTTTAAATTGGGTGTG+TGG | - | tig0022428:34548-34567 | None:intergenic | 30.0% |
| ! | TGCTTAATCATTTTGTGAAG+TGG | - | tig0022428:34573-34592 | None:intergenic | 30.0% |
| CAAAATGATTAAGCAGTGAT+TGG | + | tig0022428:34578-34597 | Msa1400210:intron | 30.0% | |
| ! | AATTAAGGCATCTGTATAGA+AGG | + | tig0022428:34672-34691 | Msa1400210:intron | 30.0% |
| ! | ATTAAGGCATCTGTATAGAA+GGG | + | tig0022428:34673-34692 | Msa1400210:intron | 30.0% |
| CAATTTATTAGTGCCTAACT+TGG | + | tig0022428:34745-34764 | Msa1400210:intron | 30.0% | |
| AATCCCATTGAGACAAATAA+AGG | - | tig0022428:34901-34920 | None:intergenic | 30.0% | |
| ATATAGAAAAGGACACAATC+TGG | - | tig0022428:34999-35018 | None:intergenic | 30.0% | |
| CGCTGTTAATGTTTATGAAT+TGG | + | tig0022428:35125-35144 | Msa1400210:intron | 30.0% | |
| ! | CTTTCATATGATTTGAAGTG+GGG | + | tig0022428:35177-35196 | Msa1400210:intron | 30.0% |
| TAGGGATATACATTAAGCAT+TGG | + | tig0022428:35378-35397 | Msa1400210:intron | 30.0% | |
| CATTAACTGAGAACAGAAAA+AGG | - | tig0022428:35405-35424 | None:intergenic | 30.0% | |
| TCGGAAGATAGTTAATTGAT+AGG | - | tig0022428:35528-35547 | None:intergenic | 30.0% | |
| AATTCTATATGGAGGGATTT+CGG | - | tig0022428:35624-35643 | None:intergenic | 30.0% | |
| AAATCCCTCCATATAGAATT+AGG | + | tig0022428:35624-35643 | Msa1400210:intron | 30.0% | |
| GTTTACCTAATTCTATATGG+AGG | - | tig0022428:35632-35651 | None:intergenic | 30.0% | |
| !!! | TGGTATTTTTAAAACGTTGG+TGG | - | tig0022428:35832-35851 | None:intergenic | 30.0% |
| TTAAAAATACCACTTTGCTG+GGG | + | tig0022428:35840-35859 | Msa1400210:intron | 30.0% | |
| ATTACATTAACCTACCTAGT+TGG | - | tig0022428:36171-36190 | None:intergenic | 30.0% | |
| TCCATCAAGGATGAAAAAAT+GGG | - | tig0022428:36303-36322 | None:intergenic | 30.0% | |
| ATCCATCAAGGATGAAAAAA+TGG | - | tig0022428:36304-36323 | None:intergenic | 30.0% | |
| TGTTTCAACGTATCTAATAC+TGG | + | tig0022428:36338-36357 | Msa1400210:intron | 30.0% | |
| GTTTCAACGTATCTAATACT+GGG | + | tig0022428:36339-36358 | Msa1400210:intron | 30.0% | |
| ! | TGTAAGAGAGCTCTAATTTA+GGG | + | tig0022428:36413-36432 | Msa1400210:intron | 30.0% |
| TATGTAGAGGACAAAAGTAA+GGG | + | tig0022428:36548-36567 | Msa1400210:intron | 30.0% | |
| ACCCTATCATTTAGTTATTC+TGG | + | tig0022428:36691-36710 | Msa1400210:intron | 30.0% | |
| !! | CTCTATAACAGGTTTTGTAA+AGG | + | tig0022428:36747-36766 | Msa1400210:intron | 30.0% |
| CTCTTCTAAATGCATCATAA+AGG | - | tig0022428:36877-36896 | None:intergenic | 30.0% | |
| AATAGGGATTCAAACATAAG+AGG | - | tig0022428:36931-36950 | None:intergenic | 30.0% | |
| AAATCCTTCTAGATAACTCA+TGG | + | tig0022428:36978-36997 | Msa1400210:intron | 30.0% | |
| !! | ATCATAATGAATTCTGGTTC+TGG | + | tig0022428:37028-37047 | Msa1400210:intron | 30.0% |
| TGTAGTTTAGTATGTGACTT+GGG | - | tig0022428:37064-37083 | None:intergenic | 30.0% | |
| TTGTAGTTTAGTATGTGACT+TGG | - | tig0022428:37065-37084 | None:intergenic | 30.0% | |
| !! | GCTATTTTGTCAAACAGTTT+TGG | + | tig0022428:37113-37132 | Msa1400210:intron | 30.0% |
| TTGGATAAGATATCTTCTAC+CGG | + | tig0022428:37138-37157 | Msa1400210:intron | 30.0% | |
| TTGCAATACCTTCTTTACAA+AGG | + | tig0022428:37167-37186 | Msa1400210:intron | 30.0% | |
| !! | GCGGAGAAATATTTTTATGA+AGG | - | tig0022428:37200-37219 | None:intergenic | 30.0% |
| !!! | GTTTGGTTGTTTTAGCTATT+GGG | - | tig0022428:37227-37246 | None:intergenic | 30.0% |
| !!! | AGTTTGGTTGTTTTAGCTAT+TGG | - | tig0022428:37228-37247 | None:intergenic | 30.0% |
| !! | AACAACCAAACTTTAAAGTG+CGG | + | tig0022428:37236-37255 | Msa1400210:intron | 30.0% |
| !! | AAAAACCGCACTTTAAAGTT+TGG | - | tig0022428:37244-37263 | None:intergenic | 30.0% |
| CATGCAAATTTATACCTTAC+AGG | + | tig0022428:37447-37466 | Msa1400210:intron | 30.0% | |
| ACTATTTAAAGGTTCTCCAT+TGG | - | tig0022428:37757-37776 | None:intergenic | 30.0% | |
| GTTCAATAGTCCAAGTATAA+TGG | + | tig0022428:37932-37951 | Msa1400210:three_prime_UTR | 30.0% | |
| TAGATCACAAATGGAATACG+TGG | + | tig0022428:30249-30268 | Msa1400210:five_prime_UTR | 35.0% | |
| AGATCACAAATGGAATACGT+GGG | + | tig0022428:30250-30269 | Msa1400210:five_prime_UTR | 35.0% | |
| ! | TTGTGTCTTGTTGCTAACTA+AGG | - | tig0022428:30289-30308 | None:intergenic | 35.0% |
| !! | AACAAGTGCTGGTGAAAAAA+AGG | + | tig0022428:30339-30358 | Msa1400210:five_prime_UTR | 35.0% |
| ATTTGATAGATCGCGATTTG+TGG | - | tig0022428:30482-30501 | None:intergenic | 35.0% | |
| TGTTTATTCACACGAAGAGT+CGG | + | tig0022428:30664-30683 | Msa1400210:CDS | 35.0% | |
| ! | AATAACACCGGGTTGAAATT+CGG | - | tig0022428:30732-30751 | None:intergenic | 35.0% |
| ACCATCAAGTGTAATAACAC+CGG | - | tig0022428:30744-30763 | None:intergenic | 35.0% | |
| ATCAATGTCCTTCCAATCAT+CGG | - | tig0022428:30771-30790 | None:intergenic | 35.0% | |
| ATGATTGGAAGGACATTGAT+GGG | + | tig0022428:30771-30790 | Msa1400210:CDS | 35.0% | |
| GCTGAAAATGAATTCAATGG+CGG | + | tig0022428:30830-30849 | Msa1400210:CDS | 35.0% | |
| !! | TTCTTTCTGCTTCAAGTTGA+TGG | + | tig0022428:30974-30993 | Msa1400210:CDS | 35.0% |
| GTGATTATGCCTACTCTAAT+GGG | + | tig0022428:30996-31015 | Msa1400210:CDS | 35.0% | |
| ! | TTTGATGACTAATCTTGGTC+GGG | + | tig0022428:31159-31178 | Msa1400210:intron | 35.0% |
| ATGGAAAAAACGTGGTTAAG+CGG | - | tig0022428:31225-31244 | None:intergenic | 35.0% | |
| TAAAACAAGTTCGAGACTTG+TGG | - | tig0022428:31248-31267 | None:intergenic | 35.0% | |
| !! | ACAAGTCTCGAACTTGTTTT+AGG | + | tig0022428:31247-31266 | Msa1400210:intron | 35.0% |
| !!! | CAAGTCTCGAACTTGTTTTA+GGG | + | tig0022428:31248-31267 | Msa1400210:intron | 35.0% |
| ATTGAGACGCTTATCAACAA+CGG | - | tig0022428:31457-31476 | None:intergenic | 35.0% | |
| ACTCTTATATCCCATCATGT+TGG | - | tig0022428:31676-31695 | None:intergenic | 35.0% | |
| TGAAACATAAGTGCAACAGA+GGG | - | tig0022428:31824-31843 | None:intergenic | 35.0% | |
| TTGAAACATAAGTGCAACAG+AGG | - | tig0022428:31825-31844 | None:intergenic | 35.0% | |
| !!! | TTTTAGGTTTTGGAGGACTT+GGG | - | tig0022428:32071-32090 | None:intergenic | 35.0% |
| !!! | ATTTTAGGTTTTGGAGGACT+TGG | - | tig0022428:32072-32091 | None:intergenic | 35.0% |
| !!! | GAGGATATTTTAGGTTTTGG+AGG | - | tig0022428:32078-32097 | None:intergenic | 35.0% |
| GGGAACTCAAAATGTATTGA+AGG | - | tig0022428:32100-32119 | None:intergenic | 35.0% | |
| ! | TTTGAGTTCCCTCAAATTAG+GGG | + | tig0022428:32109-32128 | Msa1400210:intron | 35.0% |
| ACAAAATCCCCCTAATTTGA+GGG | - | tig0022428:32120-32139 | None:intergenic | 35.0% | |
| TACAAAATCCCCCTAATTTG+AGG | - | tig0022428:32121-32140 | None:intergenic | 35.0% | |
| TGTAAGGTATGAAGGGATTT+GGG | - | tig0022428:32178-32197 | None:intergenic | 35.0% | |
| ! | GAGAAAGTGTAAGGTATGAA+GGG | - | tig0022428:32185-32204 | None:intergenic | 35.0% |
| ! | AAAAGGAAGGAGAAAGTGTA+AGG | - | tig0022428:32194-32213 | None:intergenic | 35.0% |
| !! | AGTTTTTGGGAATTTAGGAG+GGG | - | tig0022428:32226-32245 | None:intergenic | 35.0% |
| !! | GAAGTTTTTGGGAATTTAGG+AGG | - | tig0022428:32228-32247 | None:intergenic | 35.0% |
| ! | CATGAAGCGATGAAGTTTTT+GGG | - | tig0022428:32239-32258 | None:intergenic | 35.0% |
| ! | ACATGAAGCGATGAAGTTTT+TGG | - | tig0022428:32240-32259 | None:intergenic | 35.0% |
| !! | TTTCAAATCTAAGGGGCATT+TGG | + | tig0022428:32261-32280 | Msa1400210:intron | 35.0% |
| GGCATTTGGATAAACAACTT+AGG | + | tig0022428:32275-32294 | Msa1400210:intron | 35.0% | |
| TGACTGTTTGAGAGAGTTTA+TGG | + | tig0022428:32347-32366 | Msa1400210:intron | 35.0% | |
| !! | ACACTTCCAAAAAGTGCTTA+TGG | + | tig0022428:32571-32590 | Msa1400210:intron | 35.0% |
| AGGTGTAAGAATGACATGTT+AGG | - | tig0022428:32808-32827 | None:intergenic | 35.0% | |
| !!! | ATGAGGTGTTGGGTTTTAAT+TGG | - | tig0022428:32994-33013 | None:intergenic | 35.0% |
| TGCTGATCAGTTAAAGAAAG+TGG | + | tig0022428:32897-32916 | Msa1400210:intron | 35.0% | |
| GCTGATCAGTTAAAGAAAGT+GGG | + | tig0022428:32898-32917 | Msa1400210:intron | 35.0% | |
| CTGATCAGTTAAAGAAAGTG+GGG | + | tig0022428:32899-32918 | Msa1400210:intron | 35.0% | |
| AAGAAGAGAGAGAAAACATC+AGG | + | tig0022428:32923-32942 | Msa1400210:intron | 35.0% | |
| !!! | ATGAGGTGTTGGGTTTTAAT+TGG | + | tig0022428:32994-33013 | Msa1400210:intron | 35.0% |
| CTTAATTGTTGTAAGATGGG+TGG | + | tig0022428:33148-33167 | Msa1400210:intron | 35.0% | |
| TCAATTGGAAATGCTATTCC+GGG | + | tig0022428:33241-33260 | Msa1400210:CDS | 35.0% | |
| AATCCCATTGACAATAGAGA+TGG | + | tig0022428:33280-33299 | Msa1400210:CDS | 35.0% | |
| AGCCGATATGGTTAAAGTTA+AGG | - | tig0022428:33339-33358 | None:intergenic | 35.0% | |
| TCATAAATTGTCAGCCGATA+TGG | - | tig0022428:33351-33370 | None:intergenic | 35.0% | |
| AGGCATAAAGATCAACCAAA+TGG | - | tig0022428:33444-33463 | None:intergenic | 35.0% | |
| ATTTGGTTGATCTTTATGCC+TGG | + | tig0022428:33443-33462 | Msa1400210:CDS | 35.0% | |
| AACGAGATTAAAACAGCAAG+TGG | + | tig0022428:33580-33599 | Msa1400210:intron | 35.0% | |
| TCATGAAGCAAACTACTTGA+TGG | - | tig0022428:33648-33667 | None:intergenic | 35.0% | |
| !! | AAGTAGTTTGCTTCATGACT+TGG | + | tig0022428:33650-33669 | Msa1400210:intron | 35.0% |
| TGCACCAACCCTTAAATAAA+AGG | - | tig0022428:33810-33829 | None:intergenic | 35.0% | |
| CGAGGTAGATAAGTGTTAAA+AGG | - | tig0022428:33920-33939 | None:intergenic | 35.0% | |
| TTAGAGATAGGATGTTGTGT+TGG | + | tig0022428:33985-34004 | Msa1400210:intron | 35.0% | |
| AAATGACAACCTTAGAGAGA+AGG | + | tig0022428:34040-34059 | Msa1400210:intron | 35.0% | |
| AGCACCTATCATAGAAAAGA+TGG | + | tig0022428:34070-34089 | Msa1400210:intron | 35.0% | |
| ACCTATCATAGAAAAGATGG+TGG | + | tig0022428:34073-34092 | Msa1400210:intron | 35.0% | |
| ! | TCCACCATCTTTTCTATGAT+AGG | - | tig0022428:34077-34096 | None:intergenic | 35.0% |
| !! | TAGAAAAGATGGTGGAAACT+CGG | + | tig0022428:34081-34100 | Msa1400210:intron | 35.0% |
| ACACTTATAGATTCCCTAGT+AGG | + | tig0022428:34131-34150 | Msa1400210:intron | 35.0% | |
| CATCTAATCTACTTCCTACT+AGG | - | tig0022428:34148-34167 | None:intergenic | 35.0% | |
| CTAGTAGGAAGTAGATTAGA+TGG | + | tig0022428:34146-34165 | Msa1400210:intron | 35.0% | |
| TAGGAAGTAGATTAGATGGA+GGG | + | tig0022428:34150-34169 | Msa1400210:intron | 35.0% | |
| ! | ATTTGATAGAACGTGTCGTT+TGG | + | tig0022428:34269-34288 | Msa1400210:intron | 35.0% |
| ATAATTGACATCCTCATGCA+AGG | - | tig0022428:34397-34416 | None:intergenic | 35.0% | |
| ATTTGACATGGCTAAGCTAA+AGG | - | tig0022428:34426-34445 | None:intergenic | 35.0% | |
| TAAGATTGCTTCTTCCACAT+TGG | + | tig0022428:34634-34653 | Msa1400210:intron | 35.0% | |
| ! | ATTCATCTTTTCCTCCAATG+TGG | - | tig0022428:34651-34670 | None:intergenic | 35.0% |
| ! | TTAAGGCATCTGTATAGAAG+GGG | + | tig0022428:34674-34693 | Msa1400210:intron | 35.0% |
| TATAGAAGGGGACAAATAGA+TGG | + | tig0022428:34686-34705 | Msa1400210:intron | 35.0% | |
| AGATCGACAAACACATTTGT+TGG | + | tig0022428:34813-34832 | Msa1400210:intron | 35.0% | |
| GATCGACAAACACATTTGTT+GGG | + | tig0022428:34814-34833 | Msa1400210:intron | 35.0% | |
| ACTTCTTATGTTGAGAATCC+TGG | - | tig0022428:34848-34867 | None:intergenic | 35.0% | |
| TTCTGTTTGTGGTCAAAATG+CGG | + | tig0022428:34936-34955 | Msa1400210:intron | 35.0% | |
| AATGTGAGACGTATCTTCTT+TGG | - | tig0022428:35240-35259 | None:intergenic | 35.0% | |
| TCACATTGCGACCATATAAT+TGG | + | tig0022428:35253-35272 | Msa1400210:intron | 35.0% | |
| TAAGCTATAACCCTACAATG+TGG | + | tig0022428:35281-35300 | Msa1400210:intron | 35.0% | |
| AAGCTATAACCCTACAATGT+GGG | + | tig0022428:35282-35301 | Msa1400210:intron | 35.0% | |
| GATGTTTAACCCACATTGTA+GGG | - | tig0022428:35294-35313 | None:intergenic | 35.0% | |
| AGATGTTTAACCCACATTGT+AGG | - | tig0022428:35295-35314 | None:intergenic | 35.0% | |
| ATTCTATATGGAGGGATTTC+GGG | - | tig0022428:35623-35642 | None:intergenic | 35.0% | |
| !!! | GTGGAAGATGTTTGTTTTTG+CGG | + | tig0022428:35862-35881 | Msa1400210:intron | 35.0% |
| !!! | TGGAAGATGTTTGTTTTTGC+GGG | + | tig0022428:35863-35882 | Msa1400210:intron | 35.0% |
| CTGAGGACATAAATGATGTA+TGG | - | tig0022428:36071-36090 | None:intergenic | 35.0% | |
| CATACATCATTTATGTCCTC+AGG | + | tig0022428:36069-36088 | Msa1400210:intron | 35.0% | |
| ! | TAATTAGTGCTGTTCCAACT+AGG | + | tig0022428:36154-36173 | Msa1400210:intron | 35.0% |
| ! | CTAAACTTTTGGCACTTAGT+GGG | - | tig0022428:36195-36214 | None:intergenic | 35.0% |
| ! | ACTAAACTTTTGGCACTTAG+TGG | - | tig0022428:36196-36215 | None:intergenic | 35.0% |
| ! | ATCCATAAAAGAAGCATGAC+TGG | + | tig0022428:36217-36236 | Msa1400210:intron | 35.0% |
| ! | AACCAGTCATGCTTCTTTTA+TGG | - | tig0022428:36222-36241 | None:intergenic | 35.0% |
| !! | CATGACTGGTTTGTTTCTTA+TGG | + | tig0022428:36231-36250 | Msa1400210:intron | 35.0% |
| !!! | ACCCATTTTTTCATCCTTGA+TGG | + | tig0022428:36299-36318 | Msa1400210:intron | 35.0% |
| ! | TAACTTTTACTCGACTCCAA+TGG | + | tig0022428:36363-36382 | Msa1400210:intron | 35.0% |
| ! | GTGTAAGAGAGCTCTAATTT+AGG | + | tig0022428:36412-36431 | Msa1400210:intron | 35.0% |
| TTGACGATACATGTATGTAG+AGG | + | tig0022428:36535-36554 | Msa1400210:intron | 35.0% | |
| GTATGTAGAGGACAAAAGTA+AGG | + | tig0022428:36547-36566 | Msa1400210:intron | 35.0% | |
| CTCACATGATTCTCTATAAC+AGG | + | tig0022428:36736-36755 | Msa1400210:intron | 35.0% | |
| TAGTCCATGAGTTATCTAGA+AGG | - | tig0022428:36985-37004 | None:intergenic | 35.0% | |
| GTAGTTTAGTATGTGACTTG+GGG | - | tig0022428:37063-37082 | None:intergenic | 35.0% | |
| !!! | TTGTCAAACAGTTTTGGCTT+TGG | + | tig0022428:37119-37138 | Msa1400210:intron | 35.0% |
| !! | GAAGGTATTGCAAAACAAAC+CGG | - | tig0022428:37160-37179 | None:intergenic | 35.0% |
| GCAAGTTTCCTTTGTAAAGA+AGG | - | tig0022428:37178-37197 | None:intergenic | 35.0% | |
| ! | TTTTGTGGATGTAGTTGAAG+TGG | + | tig0022428:37269-37288 | Msa1400210:intron | 35.0% |
| ! | AACACGCATGAATGTCATTT+AGG | + | tig0022428:37404-37423 | Msa1400210:intron | 35.0% |
| ACTACTCTGTTAACTGTGAT+TGG | + | tig0022428:37557-37576 | Msa1400210:CDS | 35.0% | |
| CTACTCTGTTAACTGTGATT+GGG | + | tig0022428:37558-37577 | Msa1400210:CDS | 35.0% | |
| !! | CTGCTCTGAGATATATCAAT+CGG | - | tig0022428:37586-37605 | None:intergenic | 35.0% |
| TGTCTGTGTTTGTGAGTTAT+CGG | + | tig0022428:37701-37720 | Msa1400210:CDS | 35.0% | |
| TGTATCAAACAGCTTGAGTT+TGG | + | tig0022428:37776-37795 | Msa1400210:three_prime_UTR | 35.0% | |
| GTATCAAACAGCTTGAGTTT+GGG | + | tig0022428:37777-37796 | Msa1400210:three_prime_UTR | 35.0% | |
| AGATGGAACTCCATTATACT+TGG | - | tig0022428:37945-37964 | None:intergenic | 35.0% | |
| ! | AACGTGCAATTTCTTTTCAC+AGG | + | tig0022428:37981-38000 | Msa1400210:three_prime_UTR | 35.0% |
| ! | ACGTGCAATTTCTTTTCACA+GGG | + | tig0022428:37982-38001 | Msa1400210:three_prime_UTR | 35.0% |
| TTATGATGCATGAAGTGGCA+AGG | + | tig0022428:30226-30245 | Msa1400210:five_prime_UTR | 40.0% | |
| GATCACAAATGGAATACGTG+GGG | + | tig0022428:30251-30270 | Msa1400210:five_prime_UTR | 40.0% | |
| AAGGAAAATGCAACAAGTGC+TGG | + | tig0022428:30328-30347 | Msa1400210:five_prime_UTR | 40.0% | |
| GTTGATTGAACTTGAAGTGG+TGG | + | tig0022428:30412-30431 | Msa1400210:five_prime_UTR | 40.0% | |
| GTTTATTCACACGAAGAGTC+GGG | + | tig0022428:30665-30684 | Msa1400210:CDS | 40.0% | |
| CCATCAAGTGTAATAACACC+GGG | - | tig0022428:30743-30762 | None:intergenic | 40.0% | |
| GATGATTGGAAGGACATTGA+TGG | + | tig0022428:30770-30789 | Msa1400210:CDS | 40.0% | |
| AGCAAGAAGAAGAGAGAAGT+GGG | - | tig0022428:30798-30817 | None:intergenic | 40.0% | |
| GGTGATTATGCCTACTCTAA+TGG | + | tig0022428:30995-31014 | Msa1400210:CDS | 40.0% | |
| CACATCTTACCCATTAGAGT+AGG | - | tig0022428:31008-31027 | None:intergenic | 40.0% | |
| ! | TTGATGACTAATCTTGGTCG+GGG | + | tig0022428:31160-31179 | Msa1400210:intron | 40.0% |
| TGGAAAAAACGTGGTTAAGC+GGG | - | tig0022428:31224-31243 | None:intergenic | 40.0% | |
| ACTTGTGGATGGAAAAAACG+TGG | - | tig0022428:31233-31252 | None:intergenic | 40.0% | |
| CTCAAACTTGATCCCAGTAT+TGG | - | tig0022428:31282-31301 | None:intergenic | 40.0% | |
| ATACTGGGATCAAGTTTGAG+TGG | + | tig0022428:31282-31301 | Msa1400210:intron | 40.0% | |
| TTATTGAGGGTCCAACATGA+TGG | + | tig0022428:31662-31681 | Msa1400210:intron | 40.0% | |
| TATTGAGGGTCCAACATGAT+GGG | + | tig0022428:31663-31682 | Msa1400210:intron | 40.0% | |
| TATTTGCGAGTTTGGATGGT+AGG | + | tig0022428:31910-31929 | Msa1400210:intron | 40.0% | |
| ATTTGCGAGTTTGGATGGTA+GGG | + | tig0022428:31911-31930 | Msa1400210:intron | 40.0% | |
| TTGAGTTCCCTCAAATTAGG+GGG | + | tig0022428:32110-32129 | Msa1400210:intron | 40.0% | |
| GTGTAAGGTATGAAGGGATT+TGG | - | tig0022428:32179-32198 | None:intergenic | 40.0% | |
| ! | GGAGAAAGTGTAAGGTATGA+AGG | - | tig0022428:32186-32205 | None:intergenic | 40.0% |
| GGGGAATTTGAGAAAAAGGA+AGG | - | tig0022428:32207-32226 | None:intergenic | 40.0% | |
| AGGAGGGGAATTTGAGAAAA+AGG | - | tig0022428:32211-32230 | None:intergenic | 40.0% | |
| TAAACAACTTAGGGCCTGTT+TGG | + | tig0022428:32285-32304 | Msa1400210:intron | 40.0% | |
| TCATATACGTCCATCCAAAC+AGG | - | tig0022428:32302-32321 | None:intergenic | 40.0% | |
| !!! | GTGTTGGGTTTTAATTGGCT+AGG | - | tig0022428:32999-33018 | None:intergenic | 40.0% |
| TTAAAATCAGTTAGGGGTGG+TGG | + | tig0022428:32874-32893 | Msa1400210:intron | 40.0% | |
| !!! | GTGTTGGGTTTTAATTGGCT+GGG | + | tig0022428:32999-33018 | Msa1400210:intron | 40.0% |
| TGCACAAATAAGACCTGCAA+AGG | + | tig0022428:33193-33212 | Msa1400210:CDS | 40.0% | |
| GACAATAGAGATGGAAATGG+CGG | + | tig0022428:33289-33308 | Msa1400210:CDS | 40.0% | |
| !!! | GAGCTATTTTTCATGAGACG+TGG | + | tig0022428:33382-33401 | Msa1400210:intron | 40.0% |
| TTCATACAGGTTTGGCCATT+TGG | + | tig0022428:33426-33445 | Msa1400210:intron | 40.0% | |
| GTCTGTAGCAATAGTGAATC+CGG | + | tig0022428:33727-33746 | Msa1400210:intron | 40.0% | |
| GAGTGAAGTCATTCAAGCAA+TGG | - | tig0022428:33753-33772 | None:intergenic | 40.0% | |
| ACAACCTTAGAGAGAAGGTT+GGG | + | tig0022428:34045-34064 | Msa1400210:intron | 40.0% | |
| GTAGGAAGTAGATTAGATGG+AGG | + | tig0022428:34149-34168 | Msa1400210:intron | 40.0% | |
| GAGGGTAGTCAAATCATTAG+AGG | + | tig0022428:34168-34187 | Msa1400210:intron | 40.0% | |
| ! | AAGCATTTTCCCACTAAGTG+GGG | - | tig0022428:34308-34327 | None:intergenic | 40.0% |
| ! | CAAGCATTTTCCCACTAAGT+GGG | - | tig0022428:34309-34328 | None:intergenic | 40.0% |
| AGCTTAGCCATGTCAAATCA+AGG | + | tig0022428:34428-34447 | Msa1400210:intron | 40.0% | |
| ! | ACGCAAACCTTGATTTGACA+TGG | - | tig0022428:34438-34457 | None:intergenic | 40.0% |
| ! | ATGTTGAGAATCCTGGTTTG+TGG | - | tig0022428:34841-34860 | None:intergenic | 40.0% |
| CAATCACTTCGTTCTGTTTG+TGG | + | tig0022428:34925-34944 | Msa1400210:intron | 40.0% | |
| !! | CAATCTGGTTTGGCATAATG+AGG | - | tig0022428:34984-35003 | None:intergenic | 40.0% |
| GAAAAGGACACAATCTGGTT+TGG | - | tig0022428:34994-35013 | None:intergenic | 40.0% | |
| ! | TATTGGTTGGTGTAGTGTAG+TGG | + | tig0022428:35590-35609 | Msa1400210:intron | 40.0% |
| !!! | GGAAGATGTTTGTTTTTGCG+GGG | + | tig0022428:35864-35883 | Msa1400210:intron | 40.0% |
| GAGAGACTCAATATCCATCA+AGG | - | tig0022428:36316-36335 | None:intergenic | 40.0% | |
| TTTACTCGACTCCAATGGAA+TGG | + | tig0022428:36368-36387 | Msa1400210:intron | 40.0% | |
| TTACTCGACTCCAATGGAAT+GGG | + | tig0022428:36369-36388 | Msa1400210:intron | 40.0% | |
| ATGCAGAAAGCTCGCATTTA+AGG | - | tig0022428:36665-36684 | None:intergenic | 40.0% | |
| GAGAACCCTTATGCAGAAAA+TGG | + | tig0022428:36772-36791 | Msa1400210:CDS | 40.0% | |
| TTGAATTCTCTAGGCCTTTG+AGG | + | tig0022428:36815-36834 | Msa1400210:CDS | 40.0% | |
| AGATGATCCATAGTCCTCAA+AGG | - | tig0022428:36832-36851 | None:intergenic | 40.0% | |
| !!! | GTTGTTTTAGCTATTGGGCA+TGG | - | tig0022428:37222-37241 | None:intergenic | 40.0% |
| ACAGTTAACAGAGTAGTGTC+CGG | - | tig0022428:37554-37573 | None:intergenic | 40.0% | |
| GTCTGTGTTTGTGAGTTATC+GGG | + | tig0022428:37702-37721 | Msa1400210:CDS | 40.0% | |
| AAGGTTCTCCATTGGAGTAA+AGG | - | tig0022428:37749-37768 | None:intergenic | 40.0% | |
| TGCAACAACTAAGCACAAGA+TGG | - | tig0022428:37962-37981 | None:intergenic | 40.0% | |
| ! | CGTGCAATTTCTTTTCACAG+GGG | + | tig0022428:37983-38002 | Msa1400210:three_prime_UTR | 40.0% |
| ! | GTGCAATTTCTTTTCACAGG+GGG | + | tig0022428:37984-38003 | Msa1400210:three_prime_UTR | 40.0% |
| GTGGCAAGGTAGATCACAAA+TGG | + | tig0022428:30240-30259 | Msa1400210:five_prime_UTR | 45.0% | |
| ! | GTGCTTGACTTTTCTGAGCT+TGG | - | tig0022428:30458-30477 | None:intergenic | 45.0% |
| CTCAACATGAATCTCTGACC+CGG | - | tig0022428:30708-30727 | None:intergenic | 45.0% | |
| GTTGAGTCCGAATTTCAACC+CGG | + | tig0022428:30722-30741 | Msa1400210:CDS | 45.0% | |
| !! | CCCGGTGTTATTACACTTGA+TGG | + | tig0022428:30740-30759 | Msa1400210:CDS | 45.0% |
| ! | TTGATGGTCATGCCGATGAT+TGG | + | tig0022428:30756-30775 | Msa1400210:CDS | 45.0% |
| GAGCAAGAAGAAGAGAGAAG+TGG | - | tig0022428:30799-30818 | None:intergenic | 45.0% | |
| TTGTTGCAGAGTGTGCATGA+TGG | + | tig0022428:30941-30960 | Msa1400210:intron | 45.0% | |
| GGAAAAAACGTGGTTAAGCG+GGG | - | tig0022428:31223-31242 | None:intergenic | 45.0% | |
| ACAAGTTCGAGACTTGTGGA+TGG | - | tig0022428:31244-31263 | None:intergenic | 45.0% | |
| ! | CTTGATCCCAGTATTGGACT+CGG | - | tig0022428:31276-31295 | None:intergenic | 45.0% |
| GAGGTGACCGGTATATTTAG+TGG | + | tig0022428:31351-31370 | Msa1400210:intron | 45.0% | |
| AATGCTCCAAAACCACAGGA+AGG | - | tig0022428:31405-31424 | None:intergenic | 45.0% | |
| GGTTAATGCTCCAAAACCAC+AGG | - | tig0022428:31409-31428 | None:intergenic | 45.0% | |
| CAACGGATATTACTGGGAGT+CGG | - | tig0022428:31440-31459 | None:intergenic | 45.0% | |
| TGAGGGTCTATTTGCGAGTT+TGG | + | tig0022428:31902-31921 | Msa1400210:intron | 45.0% | |
| GGTCTATTTGCGAGTTTGGA+TGG | + | tig0022428:31906-31925 | Msa1400210:intron | 45.0% | |
| TTTGCGAGTTTGGATGGTAG+GGG | + | tig0022428:31912-31931 | Msa1400210:intron | 45.0% | |
| AGGTATGAAGGGATTTGGGA+GGG | - | tig0022428:32174-32193 | None:intergenic | 45.0% | |
| AAGGTATGAAGGGATTTGGG+AGG | - | tig0022428:32175-32194 | None:intergenic | 45.0% | |
| !!! | GGTGTTGGGTTTTAATTGGC+TGG | + | tig0022428:32998-33017 | Msa1400210:intron | 45.0% |
| GGGTGTAAGAATGACGTGTT+AGG | + | tig0022428:33019-33038 | Msa1400210:intron | 45.0% | |
| GTCAACTTCATGACCTTTGC+AGG | - | tig0022428:33209-33228 | None:intergenic | 45.0% | |
| TTGGAAATGCTATTCCGGGA+CGG | + | tig0022428:33245-33264 | Msa1400210:CDS | 45.0% | |
| GAATCCACACTGCAGATACT+TGG | + | tig0022428:33465-33484 | Msa1400210:CDS | 45.0% | |
| TTGTGCATACCAGAACCTGA+AGG | - | tig0022428:33502-33521 | None:intergenic | 45.0% | |
| GAAGTCATTCAAGCAATGGC+CGG | - | tig0022428:33749-33768 | None:intergenic | 45.0% | |
| AGGATGTTGTGTTGGATGTG+TGG | + | tig0022428:33993-34012 | Msa1400210:intron | 45.0% | |
| GACAACCTTAGAGAGAAGGT+TGG | + | tig0022428:34044-34063 | Msa1400210:intron | 45.0% | |
| CAACCTTAGAGAGAAGGTTG+GGG | + | tig0022428:34046-34065 | Msa1400210:intron | 45.0% | |
| AAACTCGGCTTAGGTGGTTT+GGG | + | tig0022428:34096-34115 | Msa1400210:intron | 45.0% | |
| ! | ATTTTCCCACTAAGTGGGGT+CGG | - | tig0022428:34304-34323 | None:intergenic | 45.0% |
| ! | CCAAGCATTTTCCCACTAAG+TGG | - | tig0022428:34310-34329 | None:intergenic | 45.0% |
| CCACTTAGTGGGAAAATGCT+TGG | + | tig0022428:34307-34326 | Msa1400210:intron | 45.0% | |
| GATTGCTTCTTCCACATTGG+AGG | + | tig0022428:34637-34656 | Msa1400210:intron | 45.0% | |
| AGAAGGGGACAAATAGATGG+AGG | + | tig0022428:34689-34708 | Msa1400210:intron | 45.0% | |
| GAAGGGGACAAATAGATGGA+GGG | + | tig0022428:34690-34709 | Msa1400210:intron | 45.0% | |
| ! | ATTTGTTGGGACCACAAACC+AGG | + | tig0022428:34827-34846 | Msa1400210:intron | 45.0% |
| GCGGCATTTCTGCACAAAAT+AGG | + | tig0022428:34955-34974 | Msa1400210:intron | 45.0% | |
| ATTCTAGTGCACAGAACGAC+TGG | + | tig0022428:35425-35444 | Msa1400210:intron | 45.0% | |
| AGCAGCTTTACAGTTCACTC+AGG | + | tig0022428:35466-35485 | Msa1400210:intron | 45.0% | |
| AAAATACCACTTTGCTGGGG+TGG | + | tig0022428:35843-35862 | Msa1400210:intron | 45.0% | |
| !!! | AGATGTTTGTTTTTGCGGGG+TGG | + | tig0022428:35867-35886 | Msa1400210:intron | 45.0% |
| !!! | GATGTTTGTTTTTGCGGGGT+GGG | + | tig0022428:35868-35887 | Msa1400210:intron | 45.0% |
| ! | TAGTGCTGTTCCAACTAGGT+AGG | + | tig0022428:36158-36177 | Msa1400210:intron | 45.0% |
| TACTCGACTCCAATGGAATG+GGG | + | tig0022428:36370-36389 | Msa1400210:intron | 45.0% | |
| AGCTCATTTCCCCATTCCAT+TGG | - | tig0022428:36382-36401 | None:intergenic | 45.0% | |
| !! | CATTTAAGGTGCTGCGACTA+AGG | - | tig0022428:36651-36670 | None:intergenic | 45.0% |
| GACTATGGATCATCTGCAAC+AGG | + | tig0022428:36837-36856 | Msa1400210:CDS | 45.0% | |
| !!! | GTTTTAGCTATTGGGCATGG+CGG | - | tig0022428:37219-37238 | None:intergenic | 45.0% |
| TGTGGATGTAGTTGAAGTGG+AGG | + | tig0022428:37272-37291 | Msa1400210:intron | 45.0% | |
| GTGGATGTAGTTGAAGTGGA+GGG | + | tig0022428:37273-37292 | Msa1400210:intron | 45.0% | |
| TGCGTGTTTGCATCATGTGT+TGG | - | tig0022428:37392-37411 | None:intergenic | 45.0% | |
| GGTGAATTGCACATCCTGTA+AGG | - | tig0022428:37464-37483 | None:intergenic | 45.0% | |
| CAGGATGTGCAATTCACCAT+TGG | + | tig0022428:37466-37485 | Msa1400210:intron | 45.0% | |
| GATGTGCAATTCACCATTGG+CGG | + | tig0022428:37469-37488 | Msa1400210:CDS | 45.0% | |
| GGATCAAGCAAGATGTCTGT+CGG | + | tig0022428:37490-37509 | Msa1400210:CDS | 45.0% | |
| GGATTCTGGTATCCAGTAGA+TGG | + | tig0022428:37511-37530 | Msa1400210:CDS | 45.0% | |
| ATCCAGTAGATGGTAAGCCA+TGG | + | tig0022428:37521-37540 | Msa1400210:CDS | 45.0% | |
| TCTCAGAGCAGTTCATTGAG+TGG | + | tig0022428:37595-37614 | Msa1400210:CDS | 45.0% | |
| TTCATTGAGTGGCAAGTCAG+TGG | + | tig0022428:37606-37625 | Msa1400210:CDS | 45.0% | |
| ACTCAGCATCAAGTAGCTCA+TGG | + | tig0022428:37629-37648 | Msa1400210:CDS | 45.0% | |
| GGAGTAAAGGCTACACTCTT+GGG | - | tig0022428:37736-37755 | None:intergenic | 45.0% | |
| TGGAGTAAAGGCTACACTCT+TGG | - | tig0022428:37737-37756 | None:intergenic | 45.0% | |
| GAGTGTAGCCTTTACTCCAA+TGG | + | tig0022428:37738-37757 | Msa1400210:CDS | 45.0% | |
| !!! | ATTTTTTAATTATTTTAATG+AGG | + | tig0022428:32977-32996 | Msa1400210:intron | 5.0% |
| !! | TTATATGATTAAAATAAAAA+AGG | + | tig0022428:33551-33570 | Msa1400210:intron | 5.0% |
| !!! | TTTTCTAAAATAATTATAAA+AGG | - | tig0022428:36279-36298 | None:intergenic | 5.0% |
| TGGTCATGCCGATGATTGGA+AGG | + | tig0022428:30760-30779 | Msa1400210:CDS | 50.0% | |
| TGGCGGAAAAATGACCGTGA+AGG | + | tig0022428:30847-30866 | Msa1400210:CDS | 50.0% | |
| TAGGGATCCGAGTCCAATAC+TGG | + | tig0022428:31266-31285 | Msa1400210:intron | 50.0% | |
| AGGGATCCGAGTCCAATACT+GGG | + | tig0022428:31267-31286 | Msa1400210:intron | 50.0% | |
| ! | TTGCGTCCTTCCTGTGGTTT+TGG | + | tig0022428:31396-31415 | Msa1400210:intron | 50.0% |
| TTACTGGGAGTCGGTAGCAA+CGG | - | tig0022428:31431-31450 | None:intergenic | 50.0% | |
| ATTTGGGAGGGGAGAGCTTT+CGG | - | tig0022428:32162-32181 | None:intergenic | 50.0% | |
| GGTATGAAGGGATTTGGGAG+GGG | - | tig0022428:32173-32192 | None:intergenic | 50.0% | |
| CAACTTAGGGCCTGTTTGGA+TGG | + | tig0022428:32289-32308 | Msa1400210:intron | 50.0% | |
| TTGTAAGATGGGTGGCTGTG+AGG | + | tig0022428:33156-33175 | Msa1400210:intron | 50.0% | |
| !! | GCAGGTCTTATTTGTGCACG+AGG | - | tig0022428:33191-33210 | None:intergenic | 50.0% |
| GTATCTGCAGTGTGGATTCC+AGG | - | tig0022428:33464-33483 | None:intergenic | 50.0% | |
| CCATCCAAGTATCTGCAGTG+TGG | - | tig0022428:33472-33491 | None:intergenic | 50.0% | |
| CCACACTGCAGATACTTGGA+TGG | + | tig0022428:33469-33488 | Msa1400210:CDS | 50.0% | |
| TGCAGATACTTGGATGGCAC+TGG | + | tig0022428:33475-33494 | Msa1400210:CDS | 50.0% | |
| !! | CAGCAAGTGGAAGTATCAGC+AGG | + | tig0022428:33593-33612 | Msa1400210:intron | 50.0% |
| CTACCCCAACCTTCTCTCTA+AGG | - | tig0022428:34052-34071 | None:intergenic | 50.0% | |
| !! | AGATGGTGGAAACTCGGCTT+AGG | + | tig0022428:34087-34106 | Msa1400210:intron | 50.0% |
| GAAACTCGGCTTAGGTGGTT+TGG | + | tig0022428:34095-34114 | Msa1400210:intron | 50.0% | |
| AGTGCACAGAACGACTGGAA+AGG | + | tig0022428:35430-35449 | Msa1400210:intron | 50.0% | |
| !! | AGAACGACTGGAAAGGTGCT+TGG | + | tig0022428:35437-35456 | Msa1400210:intron | 50.0% |
| TGCTGCTGACATGTTTCCTG+AGG | - | tig0022428:36088-36107 | None:intergenic | 50.0% | |
| ! | CTCTAGGCCTTTGAGGACTA+TGG | + | tig0022428:36822-36841 | Msa1400210:CDS | 50.0% |
| CATCTTGCTTGATCCGCCAA+TGG | - | tig0022428:37485-37504 | None:intergenic | 50.0% | |
| GCAAGATGTCTGTCGGATTC+TGG | + | tig0022428:37497-37516 | Msa1400210:CDS | 50.0% | |
| TGCCATGGCTTACCATCTAC+TGG | - | tig0022428:37526-37545 | None:intergenic | 50.0% | |
| GTAGATGGTAAGCCATGGCA+CGG | + | tig0022428:37526-37545 | Msa1400210:CDS | 50.0% | |
| GGTCCATGGAGCTGTGAAAC+CGG | + | tig0022428:30686-30705 | Msa1400210:CDS | 55.0% | |
| GTCCATGGAGCTGTGAAACC+GGG | + | tig0022428:30687-30706 | Msa1400210:CDS | 55.0% | |
| TGGTCGGGGAAACTCCTTAC+TGG | + | tig0022428:31174-31193 | Msa1400210:intron | 55.0% | |
| GGTCGGGGAAACTCCTTACT+GGG | + | tig0022428:31175-31194 | Msa1400210:intron | 55.0% | |
| AAGCGGGGAGACCTCATGAA+AGG | - | tig0022428:31208-31227 | None:intergenic | 55.0% | |
| GAGATGTTGCGTCCTTCCTG+TGG | + | tig0022428:31390-31409 | Msa1400210:intron | 55.0% | |
| TACTGGGAGTCGGTAGCAAC+GGG | - | tig0022428:31430-31449 | None:intergenic | 55.0% | |
| TTTGGATGGTAGGGGACGAG+AGG | + | tig0022428:31920-31939 | Msa1400210:intron | 55.0% | |
| TTGGATGGTAGGGGACGAGA+GGG | + | tig0022428:31921-31940 | Msa1400210:intron | 55.0% | |
| TTTGGGAGGGGAGAGCTTTC+GGG | - | tig0022428:32161-32180 | None:intergenic | 55.0% | |
| GCTATTCCGGGACGGCTTTA+TGG | + | tig0022428:33253-33272 | Msa1400210:CDS | 55.0% | |
| ! | ATTCCGGGACGGCTTTATGG+CGG | + | tig0022428:33256-33275 | Msa1400210:CDS | 55.0% |
| GAGATGGAAATGGCGGTGAC+AGG | + | tig0022428:33296-33315 | Msa1400210:CDS | 55.0% | |
| !! | TTGGATGGCACTGGTCCTTC+AGG | + | tig0022428:33484-33503 | Msa1400210:CDS | 55.0% |
| TGGTGGAAACTCGGCTTAGG+TGG | + | tig0022428:34090-34109 | Msa1400210:intron | 55.0% | |
| ATGTAGCCGACCCCACTTAG+TGG | + | tig0022428:34295-34314 | Msa1400210:intron | 55.0% | |
| TGTAGCCGACCCCACTTAGT+GGG | + | tig0022428:34296-34315 | Msa1400210:intron | 55.0% | |
| !! | ACGACTGGAAAGGTGCTTGG+TGG | + | tig0022428:35440-35459 | Msa1400210:intron | 55.0% |
| CATCTTCCACCCCAGCAAAG+TGG | - | tig0022428:35852-35871 | None:intergenic | 55.0% | |
| CACACGAAGAGTCGGGTCCA+TGG | + | tig0022428:30672-30691 | Msa1400210:CDS | 60.0% | |
| GACCCGGTTTCACAGCTCCA+TGG | - | tig0022428:30692-30711 | None:intergenic | 60.0% | |
| GGGGAAACTCCTTACTGGGC+TGG | + | tig0022428:31179-31198 | Msa1400210:intron | 60.0% | |
| GAAAGGTGGCCAGCCCAGTA+AGG | - | tig0022428:31191-31210 | None:intergenic | 60.0% | |
| !! | TGGGCTGGCCACCTTTCATG+AGG | + | tig0022428:31194-31213 | Msa1400210:intron | 60.0% |
| CGGGGAGACCTCATGAAAGG+TGG | - | tig0022428:31205-31224 | None:intergenic | 60.0% | |
| TGGTAGGGGACGAGAGGGTT+TGG | + | tig0022428:31926-31945 | Msa1400210:intron | 60.0% | |
| GGTAGGGGACGAGAGGGTTT+GGG | + | tig0022428:31927-31946 | Msa1400210:intron | 60.0% | |
| GACGAGAGGGTTTGGGTGGA+GGG | + | tig0022428:31934-31953 | Msa1400210:intron | 60.0% | |
| ACGAGAGGGTTTGGGTGGAG+GGG | + | tig0022428:31935-31954 | Msa1400210:intron | 60.0% | |
| ! | TTCCGGGACGGCTTTATGGC+GGG | + | tig0022428:33257-33276 | Msa1400210:CDS | 60.0% |
| TTCCCGCCATAAAGCCGTCC+CGG | - | tig0022428:33262-33281 | None:intergenic | 60.0% | |
| !! | GGCACTGGTCCTTCAGGTTC+TGG | + | tig0022428:33490-33509 | Msa1400210:CDS | 60.0% |
| GGTAAGCCATGGCACGGTTC+CGG | + | tig0022428:37532-37551 | Msa1400210:CDS | 60.0% | |
| TAGTGTCCGGAACCGTGCCA+TGG | - | tig0022428:37541-37560 | None:intergenic | 60.0% | |
| AGGGGACGAGAGGGTTTGGG+TGG | + | tig0022428:31930-31949 | Msa1400210:intron | 65.0% | |
| GGACGAGAGGGTTTGGGTGG+AGG | + | tig0022428:31933-31952 | Msa1400210:intron | 65.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| tig0022428 | gene | 30224 | 38038 | 30224 | ID=Msa1400210;Name=Msa1400210 |
| tig0022428 | mRNA | 30224 | 38038 | 30224 | ID=Msa1400210-mRNA-1;Parent=Msa1400210;Name=Msa1400210-mRNA-1;_AED=0.19;_eAED=0.19;_QI=387|0.83|1|1|1|1|7|267|342 |
| tig0022428 | exon | 30224 | 30868 | 30224 | ID=Msa1400210-mRNA-1:exon:17654;Parent=Msa1400210-mRNA-1 |
| tig0022428 | exon | 30950 | 31017 | 30950 | ID=Msa1400210-mRNA-1:exon:17655;Parent=Msa1400210-mRNA-1 |
| tig0022428 | exon | 31805 | 31871 | 31805 | ID=Msa1400210-mRNA-1:exon:17656;Parent=Msa1400210-mRNA-1 |
| tig0022428 | exon | 33163 | 33317 | 33163 | ID=Msa1400210-mRNA-1:exon:17657;Parent=Msa1400210-mRNA-1 |
| tig0022428 | exon | 33435 | 33511 | 33435 | ID=Msa1400210-mRNA-1:exon:17658;Parent=Msa1400210-mRNA-1 |
| tig0022428 | exon | 36758 | 36858 | 36758 | ID=Msa1400210-mRNA-1:exon:17659;Parent=Msa1400210-mRNA-1 |
| tig0022428 | exon | 37469 | 38038 | 37469 | ID=Msa1400210-mRNA-1:exon:17660;Parent=Msa1400210-mRNA-1 |
| tig0022428 | five_prime_UTR | 30224 | 30610 | 30224 | ID=Msa1400210-mRNA-1:five_prime_utr;Parent=Msa1400210-mRNA-1 |
| tig0022428 | CDS | 30611 | 30868 | 30611 | ID=Msa1400210-mRNA-1:cds;Parent=Msa1400210-mRNA-1 |
| tig0022428 | CDS | 30950 | 31017 | 30950 | ID=Msa1400210-mRNA-1:cds;Parent=Msa1400210-mRNA-1 |
| tig0022428 | CDS | 31805 | 31871 | 31805 | ID=Msa1400210-mRNA-1:cds;Parent=Msa1400210-mRNA-1 |
| tig0022428 | CDS | 33163 | 33317 | 33163 | ID=Msa1400210-mRNA-1:cds;Parent=Msa1400210-mRNA-1 |
| tig0022428 | CDS | 33435 | 33511 | 33435 | ID=Msa1400210-mRNA-1:cds;Parent=Msa1400210-mRNA-1 |
| tig0022428 | CDS | 36758 | 36858 | 36758 | ID=Msa1400210-mRNA-1:cds;Parent=Msa1400210-mRNA-1 |
| tig0022428 | CDS | 37469 | 37771 | 37469 | ID=Msa1400210-mRNA-1:cds;Parent=Msa1400210-mRNA-1 |
| tig0022428 | three_prime_UTR | 37772 | 38038 | 37772 | ID=Msa1400210-mRNA-1:three_prime_utr;Parent=Msa1400210-mRNA-1 |
| Gene Sequence |
| Protein sequence |
