AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa1400990

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa1400990 MtrunA17_Chr7g0274521 99.123 684 6 0 1 684 1 684 0.0 1398
Msa1400990 MtrunA17_Chr1g0190281 71.922 666 142 6 27 684 1 629 0.0 941
Msa1400990 MtrunA17_Chr1g0169341 55.694 641 245 13 29 646 5 629 0.0 670
Msa1400990 MtrunA17_Chr2g0288551 44.745 628 256 9 32 648 26 573 2.23e-175 513
Msa1400990 MtrunA17_Chr1g0169571 48.315 356 174 3 29 383 6 352 8.14e-109 341
Msa1400990 MtrunA17_Chr1g0169571 52.976 168 74 3 496 660 404 569 1.31e-44 168
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa1400990 AT3G04470.1 74.482 627 130 11 27 648 1 602 0.0 898
Msa1400990 AT1G04780.1 54.038 681 243 16 29 663 7 663 0.0 681
Msa1400990 AT3G24210.1 54.487 624 235 14 29 644 5 587 0.0 624
Msa1400990 AT1G62050.1 51.807 332 150 3 33 361 18 342 1.41e-116 363
Msa1400990 AT1G62050.1 50.323 155 66 1 500 643 444 598 5.00e-39 153
Msa1400990 AT1G11740.1 51.961 306 140 2 33 338 17 315 1.38e-104 332
Msa1400990 AT1G11740.1 50.617 162 61 3 500 643 365 525 4.49e-40 156

Find 218 sgRNAs with CRISPR-Local

Find 624 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
AGCTCTGTAATTCCGTTTAT+TGG 0.141693 tig0022499:+2370 Msa1400990:CDS
TTTCGAATTCTCAAGTTATT+TGG 0.156951 tig0022499:+1678 Msa1400990:five_prime_UTR
TTCACCTTGCCGTGCGTCTT+AGG 0.188029 tig0022499:+2110 Msa1400990:CDS
CTTCTTATGTTTCTTACTTT+TGG 0.208116 tig0022499:-4709 None:intergenic
GATGGAGAAAGTATGATAAA+TGG 0.236784 tig0022499:+2871 Msa1400990:CDS
AAACATCAAAGAAAACTTCT+AGG 0.244238 tig0022499:+3145 Msa1400990:CDS
AACCTTTGGCTTGGGCTAAA+TGG 0.249992 tig0022499:+2269 Msa1400990:CDS
GACCGAGAGTGAGTATAAAA+AGG 0.256596 tig0022499:+3311 Msa1400990:CDS
TCCCCATAGTTCCTACTATC+AGG 0.267052 tig0022499:+4415 Msa1400990:CDS
CTTCTGATACTTATCGAATA+TGG 0.280746 tig0022499:+2404 Msa1400990:CDS
TCTTCCCAACACCAACAAAA+TGG 0.281649 tig0022499:-1715 None:intergenic
TTTAGTTACATTCCTTTCAT+TGG 0.284043 tig0022499:+5152 Msa1400990:three_prime_UTR
AGTGAGTAGAGCAGCATTAA+TGG 0.287445 tig0022499:+1250 Msa1400990:five_prime_UTR
ATCTCTGGTTGCTACCTTCT+GGG 0.299862 tig0022499:-3173 None:intergenic
ATTTGATTTCTTCATTTCAT+TGG 0.309845 tig0022499:+1583 Msa1400990:five_prime_UTR
AATCTCTGGTTGCTACCTTC+TGG 0.313191 tig0022499:-3174 None:intergenic
TGGATGATTGTTCTTGGTTA+GGG 0.315434 tig0022499:-1322 None:intergenic
AGCTTATTCCTCATTTATCT+TGG 0.315637 tig0022499:+2716 Msa1400990:CDS
ATGGATGATTGTTCTTGGTT+AGG 0.326281 tig0022499:-1323 None:intergenic
ATATTACAGTGTGGCATCTC+TGG 0.331434 tig0022499:+4797 Msa1400990:three_prime_UTR
CCCCTCTGACTCCTTGGATT+TGG 0.333083 tig0022499:-4526 None:intergenic
TTAGTTACATTCCTTTCATT+GGG 0.337092 tig0022499:+5153 Msa1400990:three_prime_UTR
AGACAGAGATGGTTGGGAAT+TGG 0.337475 tig0022499:+2752 Msa1400990:CDS
CACCCTGATAGTAGGAACTA+TGG 0.343827 tig0022499:-4418 None:intergenic
GAGAGATGGATGATTGTTCT+TGG 0.343990 tig0022499:-1328 None:intergenic
ATGGAGAAAGTATGATAAAT+GGG 0.345852 tig0022499:+2872 Msa1400990:CDS
ATTGTTATTAGCTATTAAAA+AGG 0.353035 tig0022499:+4943 Msa1400990:three_prime_UTR
TTTGCTTGCTCTTTCTCATA+AGG 0.366873 tig0022499:+2567 Msa1400990:CDS
CTCTGACAGTCACAGATATA+AGG 0.374610 tig0022499:+4602 Msa1400990:CDS
CTGCCTCAGCTTGCTAAGGC+TGG 0.376005 tig0022499:+1986 Msa1400990:CDS
GCATACCTGCAGACTACAAA+TGG 0.384261 tig0022499:+4643 Msa1400990:CDS
TCACCTTGCCGTGCGTCTTA+GGG 0.392208 tig0022499:+2111 Msa1400990:CDS
TCAAAGAAAACTTCTAGGTT+TGG 0.392251 tig0022499:+3150 Msa1400990:CDS
AAAGAGAAGAAGAGCTGGTT+TGG 0.397445 tig0022499:+3069 Msa1400990:CDS
TGCACGCCACTATCAACCTT+TGG 0.398920 tig0022499:+2255 Msa1400990:CDS
GTGAAATCAAGACGGGTTCC+AGG 0.400134 tig0022499:+2814 Msa1400990:CDS
CGCGGACCCCTCTGACTCCT+TGG 0.402033 tig0022499:-4532 None:intergenic
TGTTCATCATTTCAATTGCT+TGG 0.402167 tig0022499:+5040 Msa1400990:three_prime_UTR
AAGCCGCCAGTGGCTAAATC+TGG 0.402963 tig0022499:+4729 Msa1400990:CDS
ATTGGCTTCAAAATTCTCAT+TGG 0.403045 tig0022499:-3037 None:intergenic
GCCACTATCAACCTTTGGCT+TGG 0.405757 tig0022499:+2260 Msa1400990:CDS
TACAACTCCATTTGCTTCCA+TGG 0.407797 tig0022499:-1816 None:intergenic
GGGGTTGATGGTCAAGAAAA+TGG 0.410732 tig0022499:+3003 Msa1400990:CDS
ATTAGATTCTGCACTAAGAA+TGG 0.414337 tig0022499:+2945 Msa1400990:CDS
CAGCCTTAGCAAGCTGAGGC+AGG 0.425876 tig0022499:-1985 None:intergenic
TTAGATTCTGCACTAAGAAT+GGG 0.427745 tig0022499:+2946 Msa1400990:CDS
TATCCAATTATTTAATCAAA+AGG 0.430849 tig0022499:+5251 Msa1400990:three_prime_UTR
CCACTATCAACCTTTGGCTT+GGG 0.432807 tig0022499:+2261 Msa1400990:CDS
ATAGGTGTAGATACAGATAT+TGG 0.436746 tig0022499:-5087 None:intergenic
AAGAGGGAAAAGAGAGAGGT+AGG 0.438577 tig0022499:+1863 Msa1400990:CDS
GGTCCGCGTCATGGATTTCA+TGG 0.439804 tig0022499:+4547 Msa1400990:CDS
GACAAGGGGAACATTATGTT+GGG 0.441834 tig0022499:+1753 Msa1400990:five_prime_UTR
TTATTCCTCATTTATCTTGG+AGG 0.444172 tig0022499:+2719 Msa1400990:CDS
TGGTTAGGGTTGTTGTTGAT+CGG 0.444381 tig0022499:-1308 None:intergenic
ATCTAATTGCATTCTTTCCT+CGG 0.444640 tig0022499:-2929 None:intergenic
GAGACATCAAGGAGACTTCA+TGG 0.446826 tig0022499:-2651 None:intergenic
CTCTAGTGCAAACCGCCTCT+TGG 0.446843 tig0022499:-2210 None:intergenic
TGGGCAACTTCAGCTTCTGT+TGG 0.450855 tig0022499:-2631 None:intergenic
TGTCTCTGCTGAGATATTGA+TGG 0.453651 tig0022499:+2138 Msa1400990:CDS
GATGAAGAGCATGGGGTTGA+TGG 0.454083 tig0022499:+2991 Msa1400990:CDS
GGGGCTATGCGTCCAATAAA+CGG 0.458878 tig0022499:-2382 None:intergenic
TGAAAAGAAACGACGAATGA+AGG 0.461496 tig0022499:+4677 Msa1400990:CDS
TGAGGAGCTTCAGCCAATAG+AGG 0.465572 tig0022499:+4461 Msa1400990:CDS
AAGAGAAGACAGAGATGGTT+GGG 0.468938 tig0022499:+2746 Msa1400990:CDS
CTTCCCAACACCAACAAAAT+GGG 0.471570 tig0022499:-1714 None:intergenic
TGCCCTGCCTCAGCTTGCTA+AGG 0.472258 tig0022499:+1982 Msa1400990:CDS
TGAATAACCATGGAAGCAAA+TGG 0.473903 tig0022499:+1809 Msa1400990:exon
AGTAATTGGATTACCTTGAC+AGG 0.475426 tig0022499:-3480 None:intergenic
CTTCTCTTTAACCACACCAT+TGG 0.475514 tig0022499:-3055 None:intergenic
TACACACAGTCCTGCTCACT+TGG 0.476501 tig0022499:+1916 Msa1400990:CDS
GAAGTACCTGAGCTGAGCTT+AGG 0.480883 tig0022499:-1390 None:intergenic
AGAAGAAGAGCTGGTTTGGT+TGG 0.486081 tig0022499:+3073 Msa1400990:CDS
CATGGATGAAAGGAGGCCGC+GGG 0.488594 tig0022499:+4565 Msa1400990:CDS
AGAAGGTAGCAACCAGAGAT+TGG 0.488917 tig0022499:+3176 Msa1400990:CDS
ACTTTACATTTCAACGTTGG+AGG 0.495739 tig0022499:+4881 Msa1400990:three_prime_UTR
ATCCTGAAAATGTGCAGGGC+TGG 0.496055 tig0022499:-4502 None:intergenic
GAAAGCAAGTGAGAGAGAGA+TGG 0.496341 tig0022499:-1342 None:intergenic
TAAGATGAAATGAGATCTAA+AGG 0.501587 tig0022499:-1280 None:intergenic
TTGGCATCCTGAAAATGTGC+AGG 0.504120 tig0022499:-4507 None:intergenic
GCTGAGATATTGATGGCTGC+TGG 0.504685 tig0022499:+2145 Msa1400990:CDS
GGTGTTGAAAACTCCTCTAT+TGG 0.505364 tig0022499:-4474 None:intergenic
ATACTATTCTTCTATGTCCT+CGG 0.506001 tig0022499:-4772 None:intergenic
TCCACCCATTTGTAGTCTGC+AGG 0.506940 tig0022499:-4648 None:intergenic
GTGACAAGCACCCTGATAGT+AGG 0.507381 tig0022499:-4426 None:intergenic
GAGTTGCTGAAGCAACAATA+CGG 0.509998 tig0022499:-2306 None:intergenic
ACCCTGATAGTAGGAACTAT+GGG 0.510092 tig0022499:-4417 None:intergenic
CTTGCAACTGCCAAGTGAGC+AGG 0.510515 tig0022499:-1926 None:intergenic
AGTCAGAGGGGTCCGCGTCA+TGG 0.512417 tig0022499:+4538 Msa1400990:CDS
CCCAAGCCAAAGGTTGATAG+TGG 0.513722 tig0022499:-2261 None:intergenic
GAAGGAAGTTACAAATGCCT+TGG 0.513831 tig0022499:+2591 Msa1400990:CDS
CGTGCTGATATGACCCTAGC+TGG 0.519065 tig0022499:+2445 Msa1400990:CDS
CGGTGTAGGAGCTGCGAAGA+GGG 0.520624 tig0022499:+1847 Msa1400990:CDS
TGATGGCTGCTGGTGCGGAT+TGG 0.520775 tig0022499:+2155 Msa1400990:CDS
CTTTACATTTCAACGTTGGA+GGG 0.521584 tig0022499:+4882 Msa1400990:three_prime_UTR
AAAATGTTTGGTCTGATCGT+TGG 0.521844 tig0022499:-2486 None:intergenic
TCAGGCGTCAACCACAATAC+AGG 0.522118 tig0022499:-3342 None:intergenic
AGTTGCTGAAGCAACAATAC+GGG 0.522431 tig0022499:-2305 None:intergenic
TCATGGATGAAAGGAGGCCG+CGG 0.523051 tig0022499:+4564 Msa1400990:CDS
TGCTCTTTCTCATAAGGAGA+AGG 0.524103 tig0022499:+2573 Msa1400990:CDS
GAGTTTCTGAAGGATGATAG+TGG 0.526156 tig0022499:+3219 Msa1400990:CDS
GTTTACAGAACGAGCATGGT+TGG 0.527407 tig0022499:+2179 Msa1400990:CDS
CGTTGAAATGTAAAGTCAGC+TGG 0.531555 tig0022499:-4874 None:intergenic
TGAATCTTAAAACTCATGAA+TGG 0.533740 tig0022499:-1607 None:intergenic
ACAAATGCCTTGGAAGGGGC+TGG 0.535652 tig0022499:+2601 Msa1400990:CDS
GGACAAGGGGAACATTATGT+TGG 0.535811 tig0022499:+1752 Msa1400990:five_prime_UTR
TGAAGTGGCGTCTCTCTAGC+AGG 0.536381 tig0022499:-2091 None:intergenic
TTGTGTACCAGCCCCTTCCA+AGG 0.538938 tig0022499:-2608 None:intergenic
AGAGGTAGGAGATAAATCCA+TGG 0.539128 tig0022499:+1877 Msa1400990:CDS
TCTGTGACTGTCAGAGTCGC+TGG 0.539332 tig0022499:-4595 None:intergenic
CAAGAGAAGACAGAGATGGT+TGG 0.541147 tig0022499:+2745 Msa1400990:CDS
TGGTTAAAGAGAAGAAGAGC+TGG 0.545487 tig0022499:+3064 Msa1400990:CDS
ACTTCTAGGTTTGGCCCAGA+AGG 0.545633 tig0022499:+3159 Msa1400990:CDS
CAAACTTTACCAACACAGAC+AGG 0.545640 tig0022499:-5217 None:intergenic
CCATCTCCAGATTTAGCCAC+TGG 0.545865 tig0022499:-4735 None:intergenic
TATTACAGTGTGGCATCTCT+GGG 0.546255 tig0022499:+4798 Msa1400990:three_prime_UTR
GGATGAAAGGAGGCCGCGGG+GGG 0.547702 tig0022499:+4568 Msa1400990:CDS
AGCCTTAGCAAGCTGAGGCA+GGG 0.548264 tig0022499:-1984 None:intergenic
CATATTTGTCTGAGACATCA+AGG 0.550491 tig0022499:-2662 None:intergenic
ATCTAGAAATTGAAAGGACA+AGG 0.552008 tig0022499:+1737 Msa1400990:five_prime_UTR
GGGAAGATCTAGAAATTGAA+AGG 0.553007 tig0022499:+1731 Msa1400990:five_prime_UTR
GAAATGAGATCTAAAGGTGG+TGG 0.553336 tig0022499:-1274 None:intergenic
CATACCTGCAGACTACAAAT+GGG 0.560618 tig0022499:+4644 Msa1400990:CDS
TAGGGTTGTTGTTGATCGGA+CGG 0.561432 tig0022499:-1304 None:intergenic
CATATTCGATAAGTATCAGA+AGG 0.561679 tig0022499:-2403 None:intergenic
ATAGTTGCATTGCGTTTGCA+TGG 0.566512 tig0022499:+5274 Msa1400990:three_prime_UTR
CACCAACCTAAGCTCAGCTC+AGG 0.567112 tig0022499:+1384 Msa1400990:five_prime_UTR
CCCCATAGTTCCTACTATCA+GGG 0.568271 tig0022499:+4416 Msa1400990:CDS
ATATTTAGTCAAATCCTCCA+TGG 0.568458 tig0022499:-1894 None:intergenic
TCAGCTTGCTAAGGCTGGTG+AGG 0.570063 tig0022499:+1991 Msa1400990:CDS
GAAGTTACAAATGCCTTGGA+AGG 0.570245 tig0022499:+2595 Msa1400990:CDS
AGACGCACGGCAAGGTGAAG+TGG 0.570931 tig0022499:-2106 None:intergenic
TGATAGTGGAGACACCAAGA+AGG 0.572604 tig0022499:+3233 Msa1400990:CDS
AGTTACAAATGCCTTGGAAG+GGG 0.572755 tig0022499:+2597 Msa1400990:CDS
AATGGAGTTGTACATGATAA+CGG 0.575756 tig0022499:+1827 Msa1400990:CDS
GATATTGATGGCTGCTGGTG+CGG 0.579629 tig0022499:+2150 Msa1400990:CDS
TTTGCTAAAATGTCAAGTAG+AGG 0.583134 tig0022499:-3393 None:intergenic
AAGTTACAAATGCCTTGGAA+GGG 0.583456 tig0022499:+2596 Msa1400990:CDS
TCATGGATTTCATGGATGAA+AGG 0.583566 tig0022499:+4555 Msa1400990:CDS
CTGACTTTACATTTCAACGT+TGG 0.583804 tig0022499:+4878 Msa1400990:three_prime_UTR
TGACGCCTCCAAGATAAATG+AGG 0.587195 tig0022499:-2724 None:intergenic
CCAGTGGCTAAATCTGGAGA+TGG 0.587770 tig0022499:+4735 Msa1400990:CDS
ACCAGGTATTGATGTTACTC+AGG 0.588660 tig0022499:+2690 Msa1400990:CDS
GCAGACCATCAAAACCAGCT+AGG 0.589389 tig0022499:-2459 None:intergenic
ACTATCATCCTTCAGAAACT+CGG 0.589398 tig0022499:-3217 None:intergenic
TGGAGTTTACAGAACGAGCA+TGG 0.589521 tig0022499:+2175 Msa1400990:CDS
CACCATTTAGCCCAAGCCAA+AGG 0.589547 tig0022499:-2271 None:intergenic
AAATCGATGATCATCGACAT+AGG 0.590060 tig0022499:-5105 None:intergenic
TGCCAAATCCAAGGAGTCAG+AGG 0.590771 tig0022499:+4524 Msa1400990:CDS
TTATGACATGCTTAATGTGA+TGG 0.591587 tig0022499:+2786 Msa1400990:CDS
TTCAAAGGACCTGTCTGTGT+TGG 0.592622 tig0022499:+5208 Msa1400990:three_prime_UTR
TACCTGAGCTGAGCTTAGGT+TGG 0.595456 tig0022499:-1386 None:intergenic
TCTTCATCTGTCATAGCACC+TGG 0.595571 tig0022499:-2832 None:intergenic
AAGTAGAGGCAGAAGTTCGT+CGG 0.598695 tig0022499:-3379 None:intergenic
TGCTGAACTTCGAGCTGATG+AGG 0.602314 tig0022499:+2039 Msa1400990:CDS
GACGTGACCATGCTGCTCTT+AGG 0.602494 tig0022499:+1948 Msa1400990:CDS
GATAGCATCCGAGTTTCTGA+AGG 0.602685 tig0022499:+3209 Msa1400990:CDS
GCCAAATCCAAGGAGTCAGA+GGG 0.603764 tig0022499:+4525 Msa1400990:CDS
CAGACCATCAAAACCAGCTA+GGG 0.604694 tig0022499:-2458 None:intergenic
AACTCAAGATTGAATAACCA+TGG 0.604913 tig0022499:+1799 Msa1400990:exon
TGGAGAGGGTTATACTTCAG+AGG 0.609321 tig0022499:+2516 Msa1400990:CDS
GTTGTACATGATAACGGTGT+AGG 0.610004 tig0022499:+1833 Msa1400990:CDS
TTGACAACTAAGCTTCCTCA+AGG 0.610439 tig0022499:+3450 Msa1400990:CDS
GCCTGAGTAACATCAATACC+TGG 0.611696 tig0022499:-2691 None:intergenic
CTTGTGAAGATGAAGAGCAT+GGG 0.612831 tig0022499:+2983 Msa1400990:CDS
TGGAGACACCAAGAAGGGAA+AGG 0.612892 tig0022499:+3239 Msa1400990:CDS
AGAGGCGGTTTGCACTAGAG+AGG 0.614004 tig0022499:+2213 Msa1400990:CDS
AGGGTTTAAGACCTGTATTG+TGG 0.615301 tig0022499:+3331 Msa1400990:CDS
TGGATGAAAGGAGGCCGCGG+GGG 0.616484 tig0022499:+4567 Msa1400990:CDS
AGACATCAAGGAGACTTCAT+GGG 0.617069 tig0022499:-2650 None:intergenic
TAGTCTGCAGGTATGCTGAA+AGG 0.618074 tig0022499:-4636 None:intergenic
CAGACAAATATGTACAGACC+AGG 0.624798 tig0022499:+2673 Msa1400990:CDS
CTAGAAATTGAAAGGACAAG+GGG 0.626901 tig0022499:+1739 Msa1400990:five_prime_UTR
TCTAGAAATTGAAAGGACAA+GGG 0.628469 tig0022499:+1738 Msa1400990:five_prime_UTR
GCGTCAAGAGAAGACAGAGA+TGG 0.634117 tig0022499:+2741 Msa1400990:CDS
TTGGAGTGCTCTCCAAGAGG+CGG 0.635863 tig0022499:+2198 Msa1400990:CDS
TGCGAAGAGGGAAAAGAGAG+AGG 0.636314 tig0022499:+1859 Msa1400990:CDS
TGGAGAAAGTATGATAAATG+GGG 0.636930 tig0022499:+2873 Msa1400990:CDS
AAATGTGCAGGGCTGGAAAG+TGG 0.638368 tig0022499:-4495 None:intergenic
GGTAATTTAACACTGCCACA+TGG 0.639682 tig0022499:+2541 Msa1400990:CDS
ATGGATGAAAGGAGGCCGCG+GGG 0.640437 tig0022499:+4566 Msa1400990:CDS
ATATTCGATAAGTATCAGAA+GGG 0.640475 tig0022499:-2402 None:intergenic
GCTTGTGAAGATGAAGAGCA+TGG 0.641106 tig0022499:+2982 Msa1400990:CDS
GACATGATCCCTAAGACGCA+CGG 0.642844 tig0022499:-2119 None:intergenic
ACCTGCAGACTACAAATGGG+TGG 0.645216 tig0022499:+4647 Msa1400990:CDS
GGTGAGTGTGAAATCAAGAC+GGG 0.645852 tig0022499:+2807 Msa1400990:CDS
TAGATTCTGCACTAAGAATG+GGG 0.645940 tig0022499:+2947 Msa1400990:CDS
GATCCCTAAGACGCACGGCA+AGG 0.647323 tig0022499:-2114 None:intergenic
GAGGGTTATACTTCAGAGGA+CGG 0.647892 tig0022499:+2520 Msa1400990:CDS
TCTCCAGATTTAGCCACTGG+CGG 0.652510 tig0022499:-4732 None:intergenic
CTGAAGTATAACCCTCTCCA+AGG 0.653686 tig0022499:-2513 None:intergenic
GATGAAATGAGATCTAAAGG+TGG 0.654093 tig0022499:-1277 None:intergenic
TGGATTTCATGGATGAAAGG+AGG 0.654440 tig0022499:+4558 Msa1400990:CDS
ACTTATCGAATATGGAAGCG+TGG 0.655889 tig0022499:+2412 Msa1400990:CDS
TCACCAGCCTTAGCAAGCTG+AGG 0.656276 tig0022499:-1989 None:intergenic
ACAAGGGGAACATTATGTTG+GGG 0.656400 tig0022499:+1754 Msa1400990:five_prime_UTR
GATAGTGGAGACACCAAGAA+GGG 0.657063 tig0022499:+3234 Msa1400990:CDS
CCCAACACCAACAAAATGGG+AGG 0.658973 tig0022499:-1711 None:intergenic
CAAGGGGAACATTATGTTGG+GGG 0.661917 tig0022499:+1755 Msa1400990:five_prime_UTR
CAACAATTTCAAGATGACAG+TGG 0.669566 tig0022499:-4980 None:intergenic
CATCCATGAAATCCATGACG+CGG 0.674845 tig0022499:-4550 None:intergenic
CGATGATGTACTGACTGCCG+AGG 0.679874 tig0022499:+2912 Msa1400990:CDS
TATTCGATAAGTATCAGAAG+GGG 0.683749 tig0022499:-2401 None:intergenic
CAGCTAGGGTCATATCAGCA+CGG 0.684228 tig0022499:-2444 None:intergenic
TGGCATCCTGAAAATGTGCA+GGG 0.686298 tig0022499:-4506 None:intergenic
TTGACAGGAAAAGTTCCTTG+AGG 0.686960 tig0022499:-3465 None:intergenic
ACGGTGTAGGAGCTGCGAAG+AGG 0.687879 tig0022499:+1846 Msa1400990:CDS
CAACAGTGATGATCCTCCAG+AGG 0.688662 tig0022499:+3116 Msa1400990:CDS
GAAACATAAGAAGCCGCCAG+TGG 0.688809 tig0022499:+4719 Msa1400990:CDS
GTTGCTGAAGCAACAATACG+GGG 0.689609 tig0022499:-2304 None:intergenic
TGGTGAGTGTGAAATCAAGA+CGG 0.693259 tig0022499:+2806 Msa1400990:CDS
TGGTTGGAGTGCTCTCCAAG+AGG 0.710548 tig0022499:+2195 Msa1400990:CDS
CCCTGATAGTAGGAACTATG+GGG 0.713342 tig0022499:-4416 None:intergenic
GGTAGGAGATAAATCCATGG+AGG 0.721140 tig0022499:+1880 Msa1400990:CDS
CAATGCGCCTAAGAGCAGCA+TGG 0.725145 tig0022499:-1955 None:intergenic
TTGTGAAGATGAAGAGCATG+GGG 0.728753 tig0022499:+2984 Msa1400990:CDS
AGAGCAAGCAAAGAACCATG+TGG 0.731679 tig0022499:-2556 None:intergenic
CCAAATCCAAGGAGTCAGAG+GGG 0.750244 tig0022499:+4526 Msa1400990:CDS
ATAGTATTAATATTACAGTG+TGG 0.761040 tig0022499:+4788 Msa1400990:exon

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!!! TTTTAATAGCTAATAACAAT+TGG - tig0022499:4943-4962 None:intergenic 15.0%
!!! ATTGTTATTAGCTATTAAAA+AGG + tig0022499:4943-4962 Msa1400990:three_prime_UTR 15.0%
!! TATCCAATTATTTAATCAAA+AGG + tig0022499:5251-5270 Msa1400990:three_prime_UTR 15.0%
!!! TATCCTTTTGATTAAATAAT+TGG - tig0022499:5257-5276 None:intergenic 15.0%
!!! TTTTAATAGCTAATAACAAT+TGG - tig0022499:4943-4962 None:intergenic 15.0%
!!! ATTGTTATTAGCTATTAAAA+AGG + tig0022499:4943-4962 Msa1400990:three_prime_UTR 15.0%
!! TATCCAATTATTTAATCAAA+AGG + tig0022499:5251-5270 Msa1400990:three_prime_UTR 15.0%
!!! TATCCTTTTGATTAAATAAT+TGG - tig0022499:5257-5276 None:intergenic 15.0%
!!! ATTTGATTTCTTCATTTCAT+TGG + tig0022499:1583-1602 Msa1400990:five_prime_UTR 20.0%
!!! TCGAATTTTACTTCAAAATT+TGG + tig0022499:1647-1666 Msa1400990:five_prime_UTR 20.0%
!!! CGAATTTTACTTCAAAATTT+GGG + tig0022499:1648-1667 Msa1400990:five_prime_UTR 20.0%
!!! GAATTTTACTTCAAAATTTG+GGG + tig0022499:1649-1668 Msa1400990:five_prime_UTR 20.0%
!!! AATTTTACTTCAAAATTTGG+GGG + tig0022499:1650-1669 Msa1400990:five_prime_UTR 20.0%
!! ATTAAAAAGAAGAAGAAGAA+AGG + tig0022499:3270-3289 Msa1400990:CDS 20.0%
!! ATCAAATTATATCTAAGTGT+TGG + tig0022499:4102-4121 Msa1400990:intron 20.0%
!! ATCATTATAAAGAACTAGAA+TGG - tig0022499:4194-4213 None:intergenic 20.0%
!!! TAATGACATTTGATTTTGAA+TGG + tig0022499:4359-4378 Msa1400990:intron 20.0%
!! ATAGTATTAATATTACAGTG+TGG + tig0022499:4788-4807 Msa1400990:exon 20.0%
!!! ATTTGATTTCTTCATTTCAT+TGG + tig0022499:1583-1602 Msa1400990:five_prime_UTR 20.0%
!!! TCGAATTTTACTTCAAAATT+TGG + tig0022499:1647-1666 Msa1400990:five_prime_UTR 20.0%
!!! CGAATTTTACTTCAAAATTT+GGG + tig0022499:1648-1667 Msa1400990:five_prime_UTR 20.0%
!!! GAATTTTACTTCAAAATTTG+GGG + tig0022499:1649-1668 Msa1400990:five_prime_UTR 20.0%
!!! AATTTTACTTCAAAATTTGG+GGG + tig0022499:1650-1669 Msa1400990:five_prime_UTR 20.0%
!! ATTAAAAAGAAGAAGAAGAA+AGG + tig0022499:3270-3289 Msa1400990:CDS 20.0%
!! ATCAAATTATATCTAAGTGT+TGG + tig0022499:4102-4121 Msa1400990:intron 20.0%
!! ATCATTATAAAGAACTAGAA+TGG - tig0022499:4194-4213 None:intergenic 20.0%
!!! TAATGACATTTGATTTTGAA+TGG + tig0022499:4359-4378 Msa1400990:intron 20.0%
!! ATAGTATTAATATTACAGTG+TGG + tig0022499:4788-4807 Msa1400990:exon 20.0%
! TAAGATGAAATGAGATCTAA+AGG - tig0022499:1283-1302 None:intergenic 25.0%
!! AGTAAAGATAAGTTGAAGAT+CGG - tig0022499:1427-1446 None:intergenic 25.0%
! TGAATCTTAAAACTCATGAA+TGG - tig0022499:1610-1629 None:intergenic 25.0%
! TTTCGAATTCTCAAGTTATT+TGG + tig0022499:1678-1697 Msa1400990:five_prime_UTR 25.0%
!! TCGTATTCGTGATTTTTATA+TGG + tig0022499:2327-2346 Msa1400990:CDS 25.0%
! ATATTCGATAAGTATCAGAA+GGG - tig0022499:2405-2424 None:intergenic 25.0%
!! ATGGAGAAAGTATGATAAAT+GGG + tig0022499:2872-2891 Msa1400990:CDS 25.0%
!!! TTTGATGTTTTTAAATCCTC+TGG - tig0022499:3135-3154 None:intergenic 25.0%
! AAACATCAAAGAAAACTTCT+AGG + tig0022499:3145-3164 Msa1400990:CDS 25.0%
!!! ACTTGACATTTTAGCAAATA+AGG + tig0022499:3398-3417 Msa1400990:CDS 25.0%
! GTAACTTTGGTTATAGTAAT+TGG - tig0022499:3497-3516 None:intergenic 25.0%
! AAGTATCATGTGATGATTAT+AGG - tig0022499:3782-3801 None:intergenic 25.0%
! GTCATTATAAAGAACAGTAA+TGG - tig0022499:4346-4365 None:intergenic 25.0%
!!! TGTCACTTTTACAAAATTTG+AGG + tig0022499:4443-4462 Msa1400990:CDS 25.0%
!! CTTCTTATGTTTCTTACTTT+TGG - tig0022499:4712-4731 None:intergenic 25.0%
! TTTAGTTACATTCCTTTCAT+TGG + tig0022499:5152-5171 Msa1400990:three_prime_UTR 25.0%
! TTAGTTACATTCCTTTCATT+GGG + tig0022499:5153-5172 Msa1400990:three_prime_UTR 25.0%
!!! ATTGGGATTTTTGTTTCATT+AGG + tig0022499:5170-5189 Msa1400990:three_prime_UTR 25.0%
!!! ATTTTGTGTGTTGTTTTCAA+AGG + tig0022499:5193-5212 Msa1400990:three_prime_UTR 25.0%
! TAAGATGAAATGAGATCTAA+AGG - tig0022499:1283-1302 None:intergenic 25.0%
!! AGTAAAGATAAGTTGAAGAT+CGG - tig0022499:1427-1446 None:intergenic 25.0%
! TGAATCTTAAAACTCATGAA+TGG - tig0022499:1610-1629 None:intergenic 25.0%
! TTTCGAATTCTCAAGTTATT+TGG + tig0022499:1678-1697 Msa1400990:five_prime_UTR 25.0%
!! TCGTATTCGTGATTTTTATA+TGG + tig0022499:2327-2346 Msa1400990:CDS 25.0%
! ATATTCGATAAGTATCAGAA+GGG - tig0022499:2405-2424 None:intergenic 25.0%
!! ATGGAGAAAGTATGATAAAT+GGG + tig0022499:2872-2891 Msa1400990:CDS 25.0%
!!! TTTGATGTTTTTAAATCCTC+TGG - tig0022499:3135-3154 None:intergenic 25.0%
! AAACATCAAAGAAAACTTCT+AGG + tig0022499:3145-3164 Msa1400990:CDS 25.0%
!!! ACTTGACATTTTAGCAAATA+AGG + tig0022499:3398-3417 Msa1400990:CDS 25.0%
! GTAACTTTGGTTATAGTAAT+TGG - tig0022499:3497-3516 None:intergenic 25.0%
! AAGTATCATGTGATGATTAT+AGG - tig0022499:3782-3801 None:intergenic 25.0%
! GTCATTATAAAGAACAGTAA+TGG - tig0022499:4346-4365 None:intergenic 25.0%
!!! TGTCACTTTTACAAAATTTG+AGG + tig0022499:4443-4462 Msa1400990:CDS 25.0%
!! CTTCTTATGTTTCTTACTTT+TGG - tig0022499:4712-4731 None:intergenic 25.0%
! TTTAGTTACATTCCTTTCAT+TGG + tig0022499:5152-5171 Msa1400990:three_prime_UTR 25.0%
! TTAGTTACATTCCTTTCATT+GGG + tig0022499:5153-5172 Msa1400990:three_prime_UTR 25.0%
!!! ATTGGGATTTTTGTTTCATT+AGG + tig0022499:5170-5189 Msa1400990:three_prime_UTR 25.0%
!!! ATTTTGTGTGTTGTTTTCAA+AGG + tig0022499:5193-5212 Msa1400990:three_prime_UTR 25.0%
ATCAAATCTGCAAACAGAAA+AGG - tig0022499:1570-1589 None:intergenic 30.0%
ATCTAGAAATTGAAAGGACA+AGG + tig0022499:1737-1756 Msa1400990:five_prime_UTR 30.0%
TCTAGAAATTGAAAGGACAA+GGG + tig0022499:1738-1757 Msa1400990:five_prime_UTR 30.0%
AACTCAAGATTGAATAACCA+TGG + tig0022499:1799-1818 Msa1400990:exon 30.0%
AATGGAGTTGTACATGATAA+CGG + tig0022499:1827-1846 Msa1400990:CDS 30.0%
ATATTTAGTCAAATCCTCCA+TGG - tig0022499:1897-1916 None:intergenic 30.0%
TATTCGATAAGTATCAGAAG+GGG - tig0022499:2404-2423 None:intergenic 30.0%
CATATTCGATAAGTATCAGA+AGG - tig0022499:2406-2425 None:intergenic 30.0%
CTTCTGATACTTATCGAATA+TGG + tig0022499:2404-2423 Msa1400990:CDS 30.0%
AGCTTATTCCTCATTTATCT+TGG + tig0022499:2716-2735 Msa1400990:CDS 30.0%
TTATTCCTCATTTATCTTGG+AGG + tig0022499:2719-2738 Msa1400990:CDS 30.0%
TTATGACATGCTTAATGTGA+TGG + tig0022499:2786-2805 Msa1400990:CDS 30.0%
! GATGGAGAAAGTATGATAAA+TGG + tig0022499:2871-2890 Msa1400990:CDS 30.0%
! TGGAGAAAGTATGATAAATG+GGG + tig0022499:2873-2892 Msa1400990:CDS 30.0%
ATCTAATTGCATTCTTTCCT+CGG - tig0022499:2932-2951 None:intergenic 30.0%
ATTAGATTCTGCACTAAGAA+TGG + tig0022499:2945-2964 Msa1400990:CDS 30.0%
TTAGATTCTGCACTAAGAAT+GGG + tig0022499:2946-2965 Msa1400990:CDS 30.0%
! ATTGGCTTCAAAATTCTCAT+TGG - tig0022499:3040-3059 None:intergenic 30.0%
!!! AATGAGAATTTTGAAGCCAA+TGG + tig0022499:3039-3058 Msa1400990:CDS 30.0%
TCAAAGAAAACTTCTAGGTT+TGG + tig0022499:3150-3169 Msa1400990:CDS 30.0%
TTTGCTAAAATGTCAAGTAG+AGG - tig0022499:3396-3415 None:intergenic 30.0%
GCATAAAAAGTTCGTAACTT+TGG - tig0022499:3510-3529 None:intergenic 30.0%
ACCTGATAAACATCTGAATT+TGG + tig0022499:3634-3653 Msa1400990:intron 30.0%
ATGTGTCTGTTTCAATTATC+TGG + tig0022499:3698-3717 Msa1400990:intron 30.0%
CATAAGGCAAAATGAATAGA+AGG - tig0022499:3946-3965 None:intergenic 30.0%
ATCTATGATAAGTCAAATCC+AGG - tig0022499:4012-4031 None:intergenic 30.0%
ATGATCTTAGTCATACAACT+GGG - tig0022499:4044-4063 None:intergenic 30.0%
TATGACTAAGATCATCAATC+TGG + tig0022499:4049-4068 Msa1400990:intron 30.0%
ATCCATTCCTGTTCTTTATA+AGG + tig0022499:4265-4284 Msa1400990:intron 30.0%
ATACTATTCTTCTATGTCCT+CGG - tig0022499:4775-4794 None:intergenic 30.0%
TGTTCATCATTTCAATTGCT+TGG + tig0022499:5040-5059 Msa1400990:three_prime_UTR 30.0%
ATAGGTGTAGATACAGATAT+TGG - tig0022499:5090-5109 None:intergenic 30.0%
! CGATTTTACATTTTCTTGAG+TGG + tig0022499:5122-5141 Msa1400990:three_prime_UTR 30.0%
GAAACAAAAATCCCAATGAA+AGG - tig0022499:5167-5186 None:intergenic 30.0%
ATCAAATCTGCAAACAGAAA+AGG - tig0022499:1570-1589 None:intergenic 30.0%
ATCTAGAAATTGAAAGGACA+AGG + tig0022499:1737-1756 Msa1400990:five_prime_UTR 30.0%
TCTAGAAATTGAAAGGACAA+GGG + tig0022499:1738-1757 Msa1400990:five_prime_UTR 30.0%
AACTCAAGATTGAATAACCA+TGG + tig0022499:1799-1818 Msa1400990:exon 30.0%
AATGGAGTTGTACATGATAA+CGG + tig0022499:1827-1846 Msa1400990:CDS 30.0%
ATATTTAGTCAAATCCTCCA+TGG - tig0022499:1897-1916 None:intergenic 30.0%
TATTCGATAAGTATCAGAAG+GGG - tig0022499:2404-2423 None:intergenic 30.0%
CATATTCGATAAGTATCAGA+AGG - tig0022499:2406-2425 None:intergenic 30.0%
CTTCTGATACTTATCGAATA+TGG + tig0022499:2404-2423 Msa1400990:CDS 30.0%
AGCTTATTCCTCATTTATCT+TGG + tig0022499:2716-2735 Msa1400990:CDS 30.0%
TTATTCCTCATTTATCTTGG+AGG + tig0022499:2719-2738 Msa1400990:CDS 30.0%
TTATGACATGCTTAATGTGA+TGG + tig0022499:2786-2805 Msa1400990:CDS 30.0%
! GATGGAGAAAGTATGATAAA+TGG + tig0022499:2871-2890 Msa1400990:CDS 30.0%
! TGGAGAAAGTATGATAAATG+GGG + tig0022499:2873-2892 Msa1400990:CDS 30.0%
ATCTAATTGCATTCTTTCCT+CGG - tig0022499:2932-2951 None:intergenic 30.0%
ATTAGATTCTGCACTAAGAA+TGG + tig0022499:2945-2964 Msa1400990:CDS 30.0%
TTAGATTCTGCACTAAGAAT+GGG + tig0022499:2946-2965 Msa1400990:CDS 30.0%
! ATTGGCTTCAAAATTCTCAT+TGG - tig0022499:3040-3059 None:intergenic 30.0%
!!! AATGAGAATTTTGAAGCCAA+TGG + tig0022499:3039-3058 Msa1400990:CDS 30.0%
TCAAAGAAAACTTCTAGGTT+TGG + tig0022499:3150-3169 Msa1400990:CDS 30.0%
TTTGCTAAAATGTCAAGTAG+AGG - tig0022499:3396-3415 None:intergenic 30.0%
GCATAAAAAGTTCGTAACTT+TGG - tig0022499:3510-3529 None:intergenic 30.0%
ACCTGATAAACATCTGAATT+TGG + tig0022499:3634-3653 Msa1400990:intron 30.0%
ATGTGTCTGTTTCAATTATC+TGG + tig0022499:3698-3717 Msa1400990:intron 30.0%
CATAAGGCAAAATGAATAGA+AGG - tig0022499:3946-3965 None:intergenic 30.0%
ATCTATGATAAGTCAAATCC+AGG - tig0022499:4012-4031 None:intergenic 30.0%
ATGATCTTAGTCATACAACT+GGG - tig0022499:4044-4063 None:intergenic 30.0%
TATGACTAAGATCATCAATC+TGG + tig0022499:4049-4068 Msa1400990:intron 30.0%
ATCCATTCCTGTTCTTTATA+AGG + tig0022499:4265-4284 Msa1400990:intron 30.0%
ATACTATTCTTCTATGTCCT+CGG - tig0022499:4775-4794 None:intergenic 30.0%
TGTTCATCATTTCAATTGCT+TGG + tig0022499:5040-5059 Msa1400990:three_prime_UTR 30.0%
ATAGGTGTAGATACAGATAT+TGG - tig0022499:5090-5109 None:intergenic 30.0%
! CGATTTTACATTTTCTTGAG+TGG + tig0022499:5122-5141 Msa1400990:three_prime_UTR 30.0%
GAAACAAAAATCCCAATGAA+AGG - tig0022499:5167-5186 None:intergenic 30.0%
GATGAAATGAGATCTAAAGG+TGG - tig0022499:1280-1299 None:intergenic 35.0%
TGGATGATTGTTCTTGGTTA+GGG - tig0022499:1325-1344 None:intergenic 35.0%
ATGGATGATTGTTCTTGGTT+AGG - tig0022499:1326-1345 None:intergenic 35.0%
! AAAATCACCTCCCATTTTGT+TGG + tig0022499:1704-1723 Msa1400990:five_prime_UTR 35.0%
GGGAAGATCTAGAAATTGAA+AGG + tig0022499:1731-1750 Msa1400990:five_prime_UTR 35.0%
CTAGAAATTGAAAGGACAAG+GGG + tig0022499:1739-1758 Msa1400990:five_prime_UTR 35.0%
TGAATAACCATGGAAGCAAA+TGG + tig0022499:1809-1828 Msa1400990:exon 35.0%
AGCTCTGTAATTCCGTTTAT+TGG + tig0022499:2370-2389 Msa1400990:CDS 35.0%
AAAATGTTTGGTCTGATCGT+TGG - tig0022499:2489-2508 None:intergenic 35.0%
! GACCAAACATTTTTGTTCCT+TGG + tig0022499:2496-2515 Msa1400990:CDS 35.0%
CTCCAAGGAACAAAAATGTT+TGG - tig0022499:2501-2520 None:intergenic 35.0%
! AACATTTTTGTTCCTTGGAG+AGG + tig0022499:2501-2520 Msa1400990:CDS 35.0%
! ACATTTTTGTTCCTTGGAGA+GGG + tig0022499:2502-2521 Msa1400990:CDS 35.0%
TTTGCTTGCTCTTTCTCATA+AGG + tig0022499:2567-2586 Msa1400990:CDS 35.0%
AAGTTACAAATGCCTTGGAA+GGG + tig0022499:2596-2615 Msa1400990:CDS 35.0%
! CATATTTGTCTGAGACATCA+AGG - tig0022499:2665-2684 None:intergenic 35.0%
TAGATTCTGCACTAAGAATG+GGG + tig0022499:2947-2966 Msa1400990:CDS 35.0%
!! GATGTTTTTAAATCCTCTGG+AGG - tig0022499:3132-3151 None:intergenic 35.0%
ACTATCATCCTTCAGAAACT+CGG - tig0022499:3220-3239 None:intergenic 35.0%
! GTTTTTATCCTTTCCCTTCT+TGG - tig0022499:3250-3269 None:intergenic 35.0%
ACCGAGAGTGAGTATAAAAA+GGG + tig0022499:3312-3331 Msa1400990:CDS 35.0%
! ACCCTTTTTATACTCACTCT+CGG - tig0022499:3316-3335 None:intergenic 35.0%
AGTAATTGGATTACCTTGAC+AGG - tig0022499:3483-3502 None:intergenic 35.0%
GCCAAATTCAGATGTTTATC+AGG - tig0022499:3638-3657 None:intergenic 35.0%
TGAAGAAGAGCAGTAAATCT+TGG - tig0022499:3873-3892 None:intergenic 35.0%
AGATGACCTGATAAACTTGT+CGG + tig0022499:3892-3911 Msa1400990:intron 35.0%
GAAAAACCGACAAGTTTATC+AGG - tig0022499:3901-3920 None:intergenic 35.0%
AACTGACAGAACTCTTCATA+AGG - tig0022499:3962-3981 None:intergenic 35.0%
TTATGAAGAGTTCTGTCAGT+TGG + tig0022499:3961-3980 Msa1400990:intron 35.0%
AATTGGGTGATTATTACACC+TGG + tig0022499:3991-4010 Msa1400990:intron 35.0%
TGATCTTAGTCATACAACTG+GGG - tig0022499:4043-4062 None:intergenic 35.0%
GATGATCTTAGTCATACAAC+TGG - tig0022499:4045-4064 None:intergenic 35.0%
ACTAAGATCATCAATCTGGT+TGG + tig0022499:4053-4072 Msa1400990:intron 35.0%
CTCCTTATAAAGAACAGGAA+TGG - tig0022499:4270-4289 None:intergenic 35.0%
TCAAGCTCCTTATAAAGAAC+AGG - tig0022499:4275-4294 None:intergenic 35.0%
TCATGGATTTCATGGATGAA+AGG + tig0022499:4555-4574 Msa1400990:CDS 35.0%
! CATTCGTCGTTTCTTTTCAT+TGG - tig0022499:4676-4695 None:intergenic 35.0%
TGAAAAGAAACGACGAATGA+AGG + tig0022499:4677-4696 Msa1400990:CDS 35.0%
CTGACTTTACATTTCAACGT+TGG + tig0022499:4878-4897 Msa1400990:three_prime_UTR 35.0%
ACTTTACATTTCAACGTTGG+AGG + tig0022499:4881-4900 Msa1400990:three_prime_UTR 35.0%
CTTTACATTTCAACGTTGGA+GGG + tig0022499:4882-4901 Msa1400990:three_prime_UTR 35.0%
GATGACAGTGGAAAAAATGA+AGG - tig0022499:4971-4990 None:intergenic 35.0%
CAACAATTTCAAGATGACAG+TGG - tig0022499:4983-5002 None:intergenic 35.0%
AAATCGATGATCATCGACAT+AGG - tig0022499:5108-5127 None:intergenic 35.0%
GATGAAATGAGATCTAAAGG+TGG - tig0022499:1280-1299 None:intergenic 35.0%
TGGATGATTGTTCTTGGTTA+GGG - tig0022499:1325-1344 None:intergenic 35.0%
ATGGATGATTGTTCTTGGTT+AGG - tig0022499:1326-1345 None:intergenic 35.0%
! AAAATCACCTCCCATTTTGT+TGG + tig0022499:1704-1723 Msa1400990:five_prime_UTR 35.0%
GGGAAGATCTAGAAATTGAA+AGG + tig0022499:1731-1750 Msa1400990:five_prime_UTR 35.0%
CTAGAAATTGAAAGGACAAG+GGG + tig0022499:1739-1758 Msa1400990:five_prime_UTR 35.0%
TGAATAACCATGGAAGCAAA+TGG + tig0022499:1809-1828 Msa1400990:exon 35.0%
AGCTCTGTAATTCCGTTTAT+TGG + tig0022499:2370-2389 Msa1400990:CDS 35.0%
AAAATGTTTGGTCTGATCGT+TGG - tig0022499:2489-2508 None:intergenic 35.0%
! GACCAAACATTTTTGTTCCT+TGG + tig0022499:2496-2515 Msa1400990:CDS 35.0%
CTCCAAGGAACAAAAATGTT+TGG - tig0022499:2501-2520 None:intergenic 35.0%
! AACATTTTTGTTCCTTGGAG+AGG + tig0022499:2501-2520 Msa1400990:CDS 35.0%
! ACATTTTTGTTCCTTGGAGA+GGG + tig0022499:2502-2521 Msa1400990:CDS 35.0%
TTTGCTTGCTCTTTCTCATA+AGG + tig0022499:2567-2586 Msa1400990:CDS 35.0%
AAGTTACAAATGCCTTGGAA+GGG + tig0022499:2596-2615 Msa1400990:CDS 35.0%
! CATATTTGTCTGAGACATCA+AGG - tig0022499:2665-2684 None:intergenic 35.0%
TAGATTCTGCACTAAGAATG+GGG + tig0022499:2947-2966 Msa1400990:CDS 35.0%
!! GATGTTTTTAAATCCTCTGG+AGG - tig0022499:3132-3151 None:intergenic 35.0%
ACTATCATCCTTCAGAAACT+CGG - tig0022499:3220-3239 None:intergenic 35.0%
! GTTTTTATCCTTTCCCTTCT+TGG - tig0022499:3250-3269 None:intergenic 35.0%
ACCGAGAGTGAGTATAAAAA+GGG + tig0022499:3312-3331 Msa1400990:CDS 35.0%
! ACCCTTTTTATACTCACTCT+CGG - tig0022499:3316-3335 None:intergenic 35.0%
AGTAATTGGATTACCTTGAC+AGG - tig0022499:3483-3502 None:intergenic 35.0%
GCCAAATTCAGATGTTTATC+AGG - tig0022499:3638-3657 None:intergenic 35.0%
TGAAGAAGAGCAGTAAATCT+TGG - tig0022499:3873-3892 None:intergenic 35.0%
AGATGACCTGATAAACTTGT+CGG + tig0022499:3892-3911 Msa1400990:intron 35.0%
GAAAAACCGACAAGTTTATC+AGG - tig0022499:3901-3920 None:intergenic 35.0%
AACTGACAGAACTCTTCATA+AGG - tig0022499:3962-3981 None:intergenic 35.0%
TTATGAAGAGTTCTGTCAGT+TGG + tig0022499:3961-3980 Msa1400990:intron 35.0%
AATTGGGTGATTATTACACC+TGG + tig0022499:3991-4010 Msa1400990:intron 35.0%
TGATCTTAGTCATACAACTG+GGG - tig0022499:4043-4062 None:intergenic 35.0%
GATGATCTTAGTCATACAAC+TGG - tig0022499:4045-4064 None:intergenic 35.0%
ACTAAGATCATCAATCTGGT+TGG + tig0022499:4053-4072 Msa1400990:intron 35.0%
CTCCTTATAAAGAACAGGAA+TGG - tig0022499:4270-4289 None:intergenic 35.0%
TCAAGCTCCTTATAAAGAAC+AGG - tig0022499:4275-4294 None:intergenic 35.0%
TCATGGATTTCATGGATGAA+AGG + tig0022499:4555-4574 Msa1400990:CDS 35.0%
! CATTCGTCGTTTCTTTTCAT+TGG - tig0022499:4676-4695 None:intergenic 35.0%
TGAAAAGAAACGACGAATGA+AGG + tig0022499:4677-4696 Msa1400990:CDS 35.0%
CTGACTTTACATTTCAACGT+TGG + tig0022499:4878-4897 Msa1400990:three_prime_UTR 35.0%
ACTTTACATTTCAACGTTGG+AGG + tig0022499:4881-4900 Msa1400990:three_prime_UTR 35.0%
CTTTACATTTCAACGTTGGA+GGG + tig0022499:4882-4901 Msa1400990:three_prime_UTR 35.0%
GATGACAGTGGAAAAAATGA+AGG - tig0022499:4971-4990 None:intergenic 35.0%
CAACAATTTCAAGATGACAG+TGG - tig0022499:4983-5002 None:intergenic 35.0%
AAATCGATGATCATCGACAT+AGG - tig0022499:5108-5127 None:intergenic 35.0%
AGTGAGTAGAGCAGCATTAA+TGG + tig0022499:1250-1269 Msa1400990:five_prime_UTR 40.0%
GAAATGAGATCTAAAGGTGG+TGG - tig0022499:1277-1296 None:intergenic 40.0%
! TGGTTAGGGTTGTTGTTGAT+CGG - tig0022499:1311-1330 None:intergenic 40.0%
GAGAGATGGATGATTGTTCT+TGG - tig0022499:1331-1350 None:intergenic 40.0%
CTTCCCAACACCAACAAAAT+GGG - tig0022499:1717-1736 None:intergenic 40.0%
TCTTCCCAACACCAACAAAA+TGG - tig0022499:1718-1737 None:intergenic 40.0%
GACAAGGGGAACATTATGTT+GGG + tig0022499:1753-1772 Msa1400990:five_prime_UTR 40.0%
ACAAGGGGAACATTATGTTG+GGG + tig0022499:1754-1773 Msa1400990:five_prime_UTR 40.0%
TACAACTCCATTTGCTTCCA+TGG - tig0022499:1819-1838 None:intergenic 40.0%
!! GTTGTACATGATAACGGTGT+AGG + tig0022499:1833-1852 Msa1400990:CDS 40.0%
AGAGGTAGGAGATAAATCCA+TGG + tig0022499:1877-1896 Msa1400990:CDS 40.0%
TGTCTCTGCTGAGATATTGA+TGG + tig0022499:2138-2157 Msa1400990:CDS 40.0%
AGTTGCTGAAGCAACAATAC+GGG - tig0022499:2308-2327 None:intergenic 40.0%
GAGTTGCTGAAGCAACAATA+CGG - tig0022499:2309-2328 None:intergenic 40.0%
ACTTATCGAATATGGAAGCG+TGG + tig0022499:2412-2431 Msa1400990:CDS 40.0%
GGTAATTTAACACTGCCACA+TGG + tig0022499:2541-2560 Msa1400990:CDS 40.0%
TGCTCTTTCTCATAAGGAGA+AGG + tig0022499:2573-2592 Msa1400990:CDS 40.0%
GAAGGAAGTTACAAATGCCT+TGG + tig0022499:2591-2610 Msa1400990:CDS 40.0%
GAAGTTACAAATGCCTTGGA+AGG + tig0022499:2595-2614 Msa1400990:CDS 40.0%
AGTTACAAATGCCTTGGAAG+GGG + tig0022499:2597-2616 Msa1400990:CDS 40.0%
AGACATCAAGGAGACTTCAT+GGG - tig0022499:2653-2672 None:intergenic 40.0%
CAGACAAATATGTACAGACC+AGG + tig0022499:2673-2692 Msa1400990:CDS 40.0%
!! ACCAGGTATTGATGTTACTC+AGG + tig0022499:2690-2709 Msa1400990:CDS 40.0%
AAGAGAAGACAGAGATGGTT+GGG + tig0022499:2746-2765 Msa1400990:CDS 40.0%
TGGTGAGTGTGAAATCAAGA+CGG + tig0022499:2806-2825 Msa1400990:CDS 40.0%
! AGATGAAGAGCTTTTTGCTG+TGG + tig0022499:2846-2865 Msa1400990:CDS 40.0%
! CTTGTGAAGATGAAGAGCAT+GGG + tig0022499:2983-3002 Msa1400990:CDS 40.0%
! TTGTGAAGATGAAGAGCATG+GGG + tig0022499:2984-3003 Msa1400990:CDS 40.0%
!!! GAATTTTGAAGCCAATGGTG+TGG + tig0022499:3044-3063 Msa1400990:CDS 40.0%
CTTCTCTTTAACCACACCAT+TGG - tig0022499:3058-3077 None:intergenic 40.0%
TGGTTAAAGAGAAGAAGAGC+TGG + tig0022499:3064-3083 Msa1400990:CDS 40.0%
AAAGAGAAGAAGAGCTGGTT+TGG + tig0022499:3069-3088 Msa1400990:CDS 40.0%
! TCTTTTGATCAGCCAATCTC+TGG - tig0022499:3191-3210 None:intergenic 40.0%
! GAGTTTCTGAAGGATGATAG+TGG + tig0022499:3219-3238 Msa1400990:CDS 40.0%
GACCGAGAGTGAGTATAAAA+AGG + tig0022499:3311-3330 Msa1400990:CDS 40.0%
! AGGGTTTAAGACCTGTATTG+TGG + tig0022499:3331-3350 Msa1400990:CDS 40.0%
!!! GAAGTTCGTCGGTTTTCAAT+GGG - tig0022499:3371-3390 None:intergenic 40.0%
!!! AGAAGTTCGTCGGTTTTCAA+TGG - tig0022499:3372-3391 None:intergenic 40.0%
TTGACAACTAAGCTTCCTCA+AGG + tig0022499:3450-3469 Msa1400990:CDS 40.0%
TTGACAGGAAAAGTTCCTTG+AGG - tig0022499:3468-3487 None:intergenic 40.0%
! TCAAGGAACTTTTCCTGTCA+AGG + tig0022499:3467-3486 Msa1400990:CDS 40.0%
TTACCTGTAGTTGCCTTCTA+TGG + tig0022499:3571-3590 Msa1400990:intron 40.0%
TACCTGTAGTTGCCTTCTAT+GGG + tig0022499:3572-3591 Msa1400990:intron 40.0%
CAAAATGAATAGAAGGCAGG+GGG - tig0022499:3939-3958 None:intergenic 40.0%
GCAAAATGAATAGAAGGCAG+GGG - tig0022499:3940-3959 None:intergenic 40.0%
GGCAAAATGAATAGAAGGCA+GGG - tig0022499:3941-3960 None:intergenic 40.0%
AGGCAAAATGAATAGAAGGC+AGG - tig0022499:3942-3961 None:intergenic 40.0%
TGTCAGTTGGCAGAGAAAAT+TGG + tig0022499:3974-3993 Msa1400990:intron 40.0%
GTCAGTTGGCAGAGAAAATT+GGG + tig0022499:3975-3994 Msa1400990:intron 40.0%
AATAATCTCTTGTGCTGCAC+AGG + tig0022499:4386-4405 Msa1400990:intron 40.0%
ACCCTGATAGTAGGAACTAT+GGG - tig0022499:4420-4439 None:intergenic 40.0%
! GGTGTTGAAAACTCCTCTAT+TGG - tig0022499:4477-4496 None:intergenic 40.0%
!! TTTTCAGGATGCCAAATCCA+AGG + tig0022499:4515-4534 Msa1400990:CDS 40.0%
TGGATTTCATGGATGAAAGG+AGG + tig0022499:4558-4577 Msa1400990:CDS 40.0%
CTCTGACAGTCACAGATATA+AGG + tig0022499:4602-4621 Msa1400990:CDS 40.0%
CATACCTGCAGACTACAAAT+GGG + tig0022499:4644-4663 Msa1400990:CDS 40.0%
ATATTACAGTGTGGCATCTC+TGG + tig0022499:4797-4816 Msa1400990:three_prime_UTR 40.0%
TATTACAGTGTGGCATCTCT+GGG + tig0022499:4798-4817 Msa1400990:three_prime_UTR 40.0%
GTGCACAAAGAAAAAGACTC+TGG - tig0022499:4850-4869 None:intergenic 40.0%
CGTTGAAATGTAAAGTCAGC+TGG - tig0022499:4877-4896 None:intergenic 40.0%
CAAACTTTACCAACACAGAC+AGG - tig0022499:5220-5239 None:intergenic 40.0%
ATAGTTGCATTGCGTTTGCA+TGG + tig0022499:5274-5293 Msa1400990:three_prime_UTR 40.0%
AGTGAGTAGAGCAGCATTAA+TGG + tig0022499:1250-1269 Msa1400990:five_prime_UTR 40.0%
GAAATGAGATCTAAAGGTGG+TGG - tig0022499:1277-1296 None:intergenic 40.0%
! TGGTTAGGGTTGTTGTTGAT+CGG - tig0022499:1311-1330 None:intergenic 40.0%
GAGAGATGGATGATTGTTCT+TGG - tig0022499:1331-1350 None:intergenic 40.0%
CTTCCCAACACCAACAAAAT+GGG - tig0022499:1717-1736 None:intergenic 40.0%
TCTTCCCAACACCAACAAAA+TGG - tig0022499:1718-1737 None:intergenic 40.0%
GACAAGGGGAACATTATGTT+GGG + tig0022499:1753-1772 Msa1400990:five_prime_UTR 40.0%
ACAAGGGGAACATTATGTTG+GGG + tig0022499:1754-1773 Msa1400990:five_prime_UTR 40.0%
TACAACTCCATTTGCTTCCA+TGG - tig0022499:1819-1838 None:intergenic 40.0%
!! GTTGTACATGATAACGGTGT+AGG + tig0022499:1833-1852 Msa1400990:CDS 40.0%
AGAGGTAGGAGATAAATCCA+TGG + tig0022499:1877-1896 Msa1400990:CDS 40.0%
TGTCTCTGCTGAGATATTGA+TGG + tig0022499:2138-2157 Msa1400990:CDS 40.0%
AGTTGCTGAAGCAACAATAC+GGG - tig0022499:2308-2327 None:intergenic 40.0%
GAGTTGCTGAAGCAACAATA+CGG - tig0022499:2309-2328 None:intergenic 40.0%
ACTTATCGAATATGGAAGCG+TGG + tig0022499:2412-2431 Msa1400990:CDS 40.0%
GGTAATTTAACACTGCCACA+TGG + tig0022499:2541-2560 Msa1400990:CDS 40.0%
TGCTCTTTCTCATAAGGAGA+AGG + tig0022499:2573-2592 Msa1400990:CDS 40.0%
GAAGGAAGTTACAAATGCCT+TGG + tig0022499:2591-2610 Msa1400990:CDS 40.0%
GAAGTTACAAATGCCTTGGA+AGG + tig0022499:2595-2614 Msa1400990:CDS 40.0%
AGTTACAAATGCCTTGGAAG+GGG + tig0022499:2597-2616 Msa1400990:CDS 40.0%
AGACATCAAGGAGACTTCAT+GGG - tig0022499:2653-2672 None:intergenic 40.0%
CAGACAAATATGTACAGACC+AGG + tig0022499:2673-2692 Msa1400990:CDS 40.0%
!! ACCAGGTATTGATGTTACTC+AGG + tig0022499:2690-2709 Msa1400990:CDS 40.0%
AAGAGAAGACAGAGATGGTT+GGG + tig0022499:2746-2765 Msa1400990:CDS 40.0%
TGGTGAGTGTGAAATCAAGA+CGG + tig0022499:2806-2825 Msa1400990:CDS 40.0%
! AGATGAAGAGCTTTTTGCTG+TGG + tig0022499:2846-2865 Msa1400990:CDS 40.0%
! CTTGTGAAGATGAAGAGCAT+GGG + tig0022499:2983-3002 Msa1400990:CDS 40.0%
! TTGTGAAGATGAAGAGCATG+GGG + tig0022499:2984-3003 Msa1400990:CDS 40.0%
!!! GAATTTTGAAGCCAATGGTG+TGG + tig0022499:3044-3063 Msa1400990:CDS 40.0%
CTTCTCTTTAACCACACCAT+TGG - tig0022499:3058-3077 None:intergenic 40.0%
TGGTTAAAGAGAAGAAGAGC+TGG + tig0022499:3064-3083 Msa1400990:CDS 40.0%
AAAGAGAAGAAGAGCTGGTT+TGG + tig0022499:3069-3088 Msa1400990:CDS 40.0%
! TCTTTTGATCAGCCAATCTC+TGG - tig0022499:3191-3210 None:intergenic 40.0%
! GAGTTTCTGAAGGATGATAG+TGG + tig0022499:3219-3238 Msa1400990:CDS 40.0%
GACCGAGAGTGAGTATAAAA+AGG + tig0022499:3311-3330 Msa1400990:CDS 40.0%
! AGGGTTTAAGACCTGTATTG+TGG + tig0022499:3331-3350 Msa1400990:CDS 40.0%
!!! GAAGTTCGTCGGTTTTCAAT+GGG - tig0022499:3371-3390 None:intergenic 40.0%
!!! AGAAGTTCGTCGGTTTTCAA+TGG - tig0022499:3372-3391 None:intergenic 40.0%
TTGACAACTAAGCTTCCTCA+AGG + tig0022499:3450-3469 Msa1400990:CDS 40.0%
TTGACAGGAAAAGTTCCTTG+AGG - tig0022499:3468-3487 None:intergenic 40.0%
! TCAAGGAACTTTTCCTGTCA+AGG + tig0022499:3467-3486 Msa1400990:CDS 40.0%
TTACCTGTAGTTGCCTTCTA+TGG + tig0022499:3571-3590 Msa1400990:intron 40.0%
TACCTGTAGTTGCCTTCTAT+GGG + tig0022499:3572-3591 Msa1400990:intron 40.0%
CAAAATGAATAGAAGGCAGG+GGG - tig0022499:3939-3958 None:intergenic 40.0%
GCAAAATGAATAGAAGGCAG+GGG - tig0022499:3940-3959 None:intergenic 40.0%
GGCAAAATGAATAGAAGGCA+GGG - tig0022499:3941-3960 None:intergenic 40.0%
AGGCAAAATGAATAGAAGGC+AGG - tig0022499:3942-3961 None:intergenic 40.0%
TGTCAGTTGGCAGAGAAAAT+TGG + tig0022499:3974-3993 Msa1400990:intron 40.0%
GTCAGTTGGCAGAGAAAATT+GGG + tig0022499:3975-3994 Msa1400990:intron 40.0%
AATAATCTCTTGTGCTGCAC+AGG + tig0022499:4386-4405 Msa1400990:intron 40.0%
ACCCTGATAGTAGGAACTAT+GGG - tig0022499:4420-4439 None:intergenic 40.0%
! GGTGTTGAAAACTCCTCTAT+TGG - tig0022499:4477-4496 None:intergenic 40.0%
!! TTTTCAGGATGCCAAATCCA+AGG + tig0022499:4515-4534 Msa1400990:CDS 40.0%
TGGATTTCATGGATGAAAGG+AGG + tig0022499:4558-4577 Msa1400990:CDS 40.0%
CTCTGACAGTCACAGATATA+AGG + tig0022499:4602-4621 Msa1400990:CDS 40.0%
CATACCTGCAGACTACAAAT+GGG + tig0022499:4644-4663 Msa1400990:CDS 40.0%
ATATTACAGTGTGGCATCTC+TGG + tig0022499:4797-4816 Msa1400990:three_prime_UTR 40.0%
TATTACAGTGTGGCATCTCT+GGG + tig0022499:4798-4817 Msa1400990:three_prime_UTR 40.0%
GTGCACAAAGAAAAAGACTC+TGG - tig0022499:4850-4869 None:intergenic 40.0%
CGTTGAAATGTAAAGTCAGC+TGG - tig0022499:4877-4896 None:intergenic 40.0%
CAAACTTTACCAACACAGAC+AGG - tig0022499:5220-5239 None:intergenic 40.0%
ATAGTTGCATTGCGTTTGCA+TGG + tig0022499:5274-5293 Msa1400990:three_prime_UTR 40.0%
! TAGGGTTGTTGTTGATCGGA+CGG - tig0022499:1307-1326 None:intergenic 45.0%
GAAAGCAAGTGAGAGAGAGA+TGG - tig0022499:1345-1364 None:intergenic 45.0%
! ACCTCCCATTTTGTTGGTGT+TGG + tig0022499:1710-1729 Msa1400990:five_prime_UTR 45.0%
!! CCTCCCATTTTGTTGGTGTT+GGG + tig0022499:1711-1730 Msa1400990:five_prime_UTR 45.0%
GGACAAGGGGAACATTATGT+TGG + tig0022499:1752-1771 Msa1400990:five_prime_UTR 45.0%
CAAGGGGAACATTATGTTGG+GGG + tig0022499:1755-1774 Msa1400990:five_prime_UTR 45.0%
AAGAGGGAAAAGAGAGAGGT+AGG + tig0022499:1863-1882 Msa1400990:CDS 45.0%
GGTAGGAGATAAATCCATGG+AGG + tig0022499:1880-1899 Msa1400990:CDS 45.0%
TGGAGTTTACAGAACGAGCA+TGG + tig0022499:2175-2194 Msa1400990:CDS 45.0%
GTTTACAGAACGAGCATGGT+TGG + tig0022499:2179-2198 Msa1400990:CDS 45.0%
! CCACTATCAACCTTTGGCTT+GGG + tig0022499:2261-2280 Msa1400990:CDS 45.0%
!! AACCTTTGGCTTGGGCTAAA+TGG + tig0022499:2269-2288 Msa1400990:CDS 45.0%
GTTGCTGAAGCAACAATACG+GGG - tig0022499:2307-2326 None:intergenic 45.0%
!!! ATGACCCTAGCTGGTTTTGA+TGG + tig0022499:2454-2473 Msa1400990:CDS 45.0%
CAGACCATCAAAACCAGCTA+GGG - tig0022499:2461-2480 None:intergenic 45.0%
CTGAAGTATAACCCTCTCCA+AGG - tig0022499:2516-2535 None:intergenic 45.0%
TGGAGAGGGTTATACTTCAG+AGG + tig0022499:2516-2535 Msa1400990:CDS 45.0%
GAGGGTTATACTTCAGAGGA+CGG + tig0022499:2520-2539 Msa1400990:CDS 45.0%
AGAGCAAGCAAAGAACCATG+TGG - tig0022499:2559-2578 None:intergenic 45.0%
GAGACATCAAGGAGACTTCA+TGG - tig0022499:2654-2673 None:intergenic 45.0%
GCCTGAGTAACATCAATACC+TGG - tig0022499:2694-2713 None:intergenic 45.0%
TGACGCCTCCAAGATAAATG+AGG - tig0022499:2727-2746 None:intergenic 45.0%
CAAGAGAAGACAGAGATGGT+TGG + tig0022499:2745-2764 Msa1400990:CDS 45.0%
AGACAGAGATGGTTGGGAAT+TGG + tig0022499:2752-2771 Msa1400990:CDS 45.0%
GGTGAGTGTGAAATCAAGAC+GGG + tig0022499:2807-2826 Msa1400990:CDS 45.0%
TCTTCATCTGTCATAGCACC+TGG - tig0022499:2835-2854 None:intergenic 45.0%
!! TGAAGAGCTTTTTGCTGTGG+AGG + tig0022499:2849-2868 Msa1400990:CDS 45.0%
GCTTGTGAAGATGAAGAGCA+TGG + tig0022499:2982-3001 Msa1400990:CDS 45.0%
!! GGGGTTGATGGTCAAGAAAA+TGG + tig0022499:3003-3022 Msa1400990:CDS 45.0%
!! AGAAGAAGAGCTGGTTTGGT+TGG + tig0022499:3073-3092 Msa1400990:CDS 45.0%
ATCTCTGGTTGCTACCTTCT+GGG - tig0022499:3176-3195 None:intergenic 45.0%
AATCTCTGGTTGCTACCTTC+TGG - tig0022499:3177-3196 None:intergenic 45.0%
AGAAGGTAGCAACCAGAGAT+TGG + tig0022499:3176-3195 Msa1400990:CDS 45.0%
GATAGCATCCGAGTTTCTGA+AGG + tig0022499:3209-3228 Msa1400990:CDS 45.0%
!! TGATAGTGGAGACACCAAGA+AGG + tig0022499:3233-3252 Msa1400990:CDS 45.0%
!! GATAGTGGAGACACCAAGAA+GGG + tig0022499:3234-3253 Msa1400990:CDS 45.0%
! TCGGTTTTCAATGGGAAGTC+AGG - tig0022499:3363-3382 None:intergenic 45.0%
AAGTAGAGGCAGAAGTTCGT+CGG - tig0022499:3382-3401 None:intergenic 45.0%
AGTTGTGAAACCTAAGCGAC+TGG - tig0022499:3660-3679 None:intergenic 45.0%
! ATGTGTCACTCTTTGTGCTG+TGG + tig0022499:4156-4175 Msa1400990:intron 45.0%
! ATGTGTCACTCTTTGTGCTG+TGG + tig0022499:4156-4175 Msa1400990:intron 45.0%
TCCCCATAGTTCCTACTATC+AGG + tig0022499:4415-4434 Msa1400990:CDS 45.0%
CCCTGATAGTAGGAACTATG+GGG - tig0022499:4419-4438 None:intergenic 45.0%
CCCCATAGTTCCTACTATCA+GGG + tig0022499:4416-4435 Msa1400990:CDS 45.0%
CACCCTGATAGTAGGAACTA+TGG - tig0022499:4421-4440 None:intergenic 45.0%
TGGCATCCTGAAAATGTGCA+GGG - tig0022499:4509-4528 None:intergenic 45.0%
TTGGCATCCTGAAAATGTGC+AGG - tig0022499:4510-4529 None:intergenic 45.0%
CATCCATGAAATCCATGACG+CGG - tig0022499:4553-4572 None:intergenic 45.0%
TAGTCTGCAGGTATGCTGAA+AGG - tig0022499:4639-4658 None:intergenic 45.0%
GCATACCTGCAGACTACAAA+TGG + tig0022499:4643-4662 Msa1400990:CDS 45.0%
TTCAAAGGACCTGTCTGTGT+TGG + tig0022499:5208-5227 Msa1400990:three_prime_UTR 45.0%
! TAGGGTTGTTGTTGATCGGA+CGG - tig0022499:1307-1326 None:intergenic 45.0%
GAAAGCAAGTGAGAGAGAGA+TGG - tig0022499:1345-1364 None:intergenic 45.0%
! ACCTCCCATTTTGTTGGTGT+TGG + tig0022499:1710-1729 Msa1400990:five_prime_UTR 45.0%
!! CCTCCCATTTTGTTGGTGTT+GGG + tig0022499:1711-1730 Msa1400990:five_prime_UTR 45.0%
GGACAAGGGGAACATTATGT+TGG + tig0022499:1752-1771 Msa1400990:five_prime_UTR 45.0%
CAAGGGGAACATTATGTTGG+GGG + tig0022499:1755-1774 Msa1400990:five_prime_UTR 45.0%
AAGAGGGAAAAGAGAGAGGT+AGG + tig0022499:1863-1882 Msa1400990:CDS 45.0%
GGTAGGAGATAAATCCATGG+AGG + tig0022499:1880-1899 Msa1400990:CDS 45.0%
TGGAGTTTACAGAACGAGCA+TGG + tig0022499:2175-2194 Msa1400990:CDS 45.0%
GTTTACAGAACGAGCATGGT+TGG + tig0022499:2179-2198 Msa1400990:CDS 45.0%
! CCACTATCAACCTTTGGCTT+GGG + tig0022499:2261-2280 Msa1400990:CDS 45.0%
!! AACCTTTGGCTTGGGCTAAA+TGG + tig0022499:2269-2288 Msa1400990:CDS 45.0%
GTTGCTGAAGCAACAATACG+GGG - tig0022499:2307-2326 None:intergenic 45.0%
!!! ATGACCCTAGCTGGTTTTGA+TGG + tig0022499:2454-2473 Msa1400990:CDS 45.0%
CAGACCATCAAAACCAGCTA+GGG - tig0022499:2461-2480 None:intergenic 45.0%
CTGAAGTATAACCCTCTCCA+AGG - tig0022499:2516-2535 None:intergenic 45.0%
TGGAGAGGGTTATACTTCAG+AGG + tig0022499:2516-2535 Msa1400990:CDS 45.0%
GAGGGTTATACTTCAGAGGA+CGG + tig0022499:2520-2539 Msa1400990:CDS 45.0%
AGAGCAAGCAAAGAACCATG+TGG - tig0022499:2559-2578 None:intergenic 45.0%
GAGACATCAAGGAGACTTCA+TGG - tig0022499:2654-2673 None:intergenic 45.0%
GCCTGAGTAACATCAATACC+TGG - tig0022499:2694-2713 None:intergenic 45.0%
TGACGCCTCCAAGATAAATG+AGG - tig0022499:2727-2746 None:intergenic 45.0%
CAAGAGAAGACAGAGATGGT+TGG + tig0022499:2745-2764 Msa1400990:CDS 45.0%
AGACAGAGATGGTTGGGAAT+TGG + tig0022499:2752-2771 Msa1400990:CDS 45.0%
GGTGAGTGTGAAATCAAGAC+GGG + tig0022499:2807-2826 Msa1400990:CDS 45.0%
TCTTCATCTGTCATAGCACC+TGG - tig0022499:2835-2854 None:intergenic 45.0%
!! TGAAGAGCTTTTTGCTGTGG+AGG + tig0022499:2849-2868 Msa1400990:CDS 45.0%
GCTTGTGAAGATGAAGAGCA+TGG + tig0022499:2982-3001 Msa1400990:CDS 45.0%
!! GGGGTTGATGGTCAAGAAAA+TGG + tig0022499:3003-3022 Msa1400990:CDS 45.0%
!! AGAAGAAGAGCTGGTTTGGT+TGG + tig0022499:3073-3092 Msa1400990:CDS 45.0%
ATCTCTGGTTGCTACCTTCT+GGG - tig0022499:3176-3195 None:intergenic 45.0%
AATCTCTGGTTGCTACCTTC+TGG - tig0022499:3177-3196 None:intergenic 45.0%
AGAAGGTAGCAACCAGAGAT+TGG + tig0022499:3176-3195 Msa1400990:CDS 45.0%
GATAGCATCCGAGTTTCTGA+AGG + tig0022499:3209-3228 Msa1400990:CDS 45.0%
!! TGATAGTGGAGACACCAAGA+AGG + tig0022499:3233-3252 Msa1400990:CDS 45.0%
!! GATAGTGGAGACACCAAGAA+GGG + tig0022499:3234-3253 Msa1400990:CDS 45.0%
! TCGGTTTTCAATGGGAAGTC+AGG - tig0022499:3363-3382 None:intergenic 45.0%
AAGTAGAGGCAGAAGTTCGT+CGG - tig0022499:3382-3401 None:intergenic 45.0%
AGTTGTGAAACCTAAGCGAC+TGG - tig0022499:3660-3679 None:intergenic 45.0%
! ATGTGTCACTCTTTGTGCTG+TGG + tig0022499:4156-4175 Msa1400990:intron 45.0%
! ATGTGTCACTCTTTGTGCTG+TGG + tig0022499:4156-4175 Msa1400990:intron 45.0%
TCCCCATAGTTCCTACTATC+AGG + tig0022499:4415-4434 Msa1400990:CDS 45.0%
CCCTGATAGTAGGAACTATG+GGG - tig0022499:4419-4438 None:intergenic 45.0%
CCCCATAGTTCCTACTATCA+GGG + tig0022499:4416-4435 Msa1400990:CDS 45.0%
CACCCTGATAGTAGGAACTA+TGG - tig0022499:4421-4440 None:intergenic 45.0%
TGGCATCCTGAAAATGTGCA+GGG - tig0022499:4509-4528 None:intergenic 45.0%
TTGGCATCCTGAAAATGTGC+AGG - tig0022499:4510-4529 None:intergenic 45.0%
CATCCATGAAATCCATGACG+CGG - tig0022499:4553-4572 None:intergenic 45.0%
TAGTCTGCAGGTATGCTGAA+AGG - tig0022499:4639-4658 None:intergenic 45.0%
GCATACCTGCAGACTACAAA+TGG + tig0022499:4643-4662 Msa1400990:CDS 45.0%
TTCAAAGGACCTGTCTGTGT+TGG + tig0022499:5208-5227 Msa1400990:three_prime_UTR 45.0%
TACCTGAGCTGAGCTTAGGT+TGG - tig0022499:1389-1408 None:intergenic 50.0%
! GAAGTACCTGAGCTGAGCTT+AGG - tig0022499:1393-1412 None:intergenic 50.0%
CCCAACACCAACAAAATGGG+AGG - tig0022499:1714-1733 None:intergenic 50.0%
TGCGAAGAGGGAAAAGAGAG+AGG + tig0022499:1859-1878 Msa1400990:CDS 50.0%
TACACACAGTCCTGCTCACT+TGG + tig0022499:1916-1935 Msa1400990:CDS 50.0%
TGCTGAACTTCGAGCTGATG+AGG + tig0022499:2039-2058 Msa1400990:CDS 50.0%
GACATGATCCCTAAGACGCA+CGG - tig0022499:2122-2141 None:intergenic 50.0%
! GCTGAGATATTGATGGCTGC+TGG + tig0022499:2145-2164 Msa1400990:CDS 50.0%
! GATATTGATGGCTGCTGGTG+CGG + tig0022499:2150-2169 Msa1400990:CDS 50.0%
TGCACGCCACTATCAACCTT+TGG + tig0022499:2255-2274 Msa1400990:CDS 50.0%
GCCACTATCAACCTTTGGCT+TGG + tig0022499:2260-2279 Msa1400990:CDS 50.0%
!! CCCAAGCCAAAGGTTGATAG+TGG - tig0022499:2264-2283 None:intergenic 50.0%
CACCATTTAGCCCAAGCCAA+AGG - tig0022499:2274-2293 None:intergenic 50.0%
GGGGCTATGCGTCCAATAAA+CGG - tig0022499:2385-2404 None:intergenic 50.0%
CAGCTAGGGTCATATCAGCA+CGG - tig0022499:2447-2466 None:intergenic 50.0%
GCAGACCATCAAAACCAGCT+AGG - tig0022499:2462-2481 None:intergenic 50.0%
TGGGCAACTTCAGCTTCTGT+TGG - tig0022499:2634-2653 None:intergenic 50.0%
GCGTCAAGAGAAGACAGAGA+TGG + tig0022499:2741-2760 Msa1400990:CDS 50.0%
! GTGAAATCAAGACGGGTTCC+AGG + tig0022499:2814-2833 Msa1400990:CDS 50.0%
!! GAGCTTTTTGCTGTGGAGGA+TGG + tig0022499:2853-2872 Msa1400990:CDS 50.0%
! GATGAAGAGCATGGGGTTGA+TGG + tig0022499:2991-3010 Msa1400990:CDS 50.0%
CAACAGTGATGATCCTCCAG+AGG + tig0022499:3116-3135 Msa1400990:CDS 50.0%
ACTTCTAGGTTTGGCCCAGA+AGG + tig0022499:3159-3178 Msa1400990:CDS 50.0%
TGGAGACACCAAGAAGGGAA+AGG + tig0022499:3239-3258 Msa1400990:CDS 50.0%
TCAGGCGTCAACCACAATAC+AGG - tig0022499:3345-3364 None:intergenic 50.0%
TGCCCATAGAAGGCAACTAC+AGG - tig0022499:3577-3596 None:intergenic 50.0%
CTGAATTTGGCCAGTCGCTT+AGG + tig0022499:3647-3666 Msa1400990:intron 50.0%
AATGAATAGAAGGCAGGGGG+CGG - tig0022499:3936-3955 None:intergenic 50.0%
! GTGTGTCACTCTTTGTGCTG+TGG + tig0022499:4232-4251 Msa1400990:intron 50.0%
GTGACAAGCACCCTGATAGT+AGG - tig0022499:4429-4448 None:intergenic 50.0%
TGAGGAGCTTCAGCCAATAG+AGG + tig0022499:4461-4480 Msa1400990:CDS 50.0%
AAATGTGCAGGGCTGGAAAG+TGG - tig0022499:4498-4517 None:intergenic 50.0%
! TTCCAGCCCTGCACATTTTC+AGG + tig0022499:4500-4519 Msa1400990:CDS 50.0%
ATCCTGAAAATGTGCAGGGC+TGG - tig0022499:4505-4524 None:intergenic 50.0%
TGCCAAATCCAAGGAGTCAG+AGG + tig0022499:4524-4543 Msa1400990:CDS 50.0%
GCCAAATCCAAGGAGTCAGA+GGG + tig0022499:4525-4544 Msa1400990:CDS 50.0%
CCAAATCCAAGGAGTCAGAG+GGG + tig0022499:4526-4545 Msa1400990:CDS 50.0%
ACCTGCAGACTACAAATGGG+TGG + tig0022499:4647-4666 Msa1400990:CDS 50.0%
TCCACCCATTTGTAGTCTGC+AGG - tig0022499:4651-4670 None:intergenic 50.0%
GAAACATAAGAAGCCGCCAG+TGG + tig0022499:4719-4738 Msa1400990:CDS 50.0%
TCTCCAGATTTAGCCACTGG+CGG - tig0022499:4735-4754 None:intergenic 50.0%
CCATCTCCAGATTTAGCCAC+TGG - tig0022499:4738-4757 None:intergenic 50.0%
CCAGTGGCTAAATCTGGAGA+TGG + tig0022499:4735-4754 Msa1400990:CDS 50.0%
TACCTGAGCTGAGCTTAGGT+TGG - tig0022499:1389-1408 None:intergenic 50.0%
! GAAGTACCTGAGCTGAGCTT+AGG - tig0022499:1393-1412 None:intergenic 50.0%
CCCAACACCAACAAAATGGG+AGG - tig0022499:1714-1733 None:intergenic 50.0%
TGCGAAGAGGGAAAAGAGAG+AGG + tig0022499:1859-1878 Msa1400990:CDS 50.0%
TACACACAGTCCTGCTCACT+TGG + tig0022499:1916-1935 Msa1400990:CDS 50.0%
TGCTGAACTTCGAGCTGATG+AGG + tig0022499:2039-2058 Msa1400990:CDS 50.0%
GACATGATCCCTAAGACGCA+CGG - tig0022499:2122-2141 None:intergenic 50.0%
! GCTGAGATATTGATGGCTGC+TGG + tig0022499:2145-2164 Msa1400990:CDS 50.0%
! GATATTGATGGCTGCTGGTG+CGG + tig0022499:2150-2169 Msa1400990:CDS 50.0%
TGCACGCCACTATCAACCTT+TGG + tig0022499:2255-2274 Msa1400990:CDS 50.0%
GCCACTATCAACCTTTGGCT+TGG + tig0022499:2260-2279 Msa1400990:CDS 50.0%
!! CCCAAGCCAAAGGTTGATAG+TGG - tig0022499:2264-2283 None:intergenic 50.0%
CACCATTTAGCCCAAGCCAA+AGG - tig0022499:2274-2293 None:intergenic 50.0%
GGGGCTATGCGTCCAATAAA+CGG - tig0022499:2385-2404 None:intergenic 50.0%
CAGCTAGGGTCATATCAGCA+CGG - tig0022499:2447-2466 None:intergenic 50.0%
GCAGACCATCAAAACCAGCT+AGG - tig0022499:2462-2481 None:intergenic 50.0%
TGGGCAACTTCAGCTTCTGT+TGG - tig0022499:2634-2653 None:intergenic 50.0%
GCGTCAAGAGAAGACAGAGA+TGG + tig0022499:2741-2760 Msa1400990:CDS 50.0%
! GTGAAATCAAGACGGGTTCC+AGG + tig0022499:2814-2833 Msa1400990:CDS 50.0%
!! GAGCTTTTTGCTGTGGAGGA+TGG + tig0022499:2853-2872 Msa1400990:CDS 50.0%
! GATGAAGAGCATGGGGTTGA+TGG + tig0022499:2991-3010 Msa1400990:CDS 50.0%
CAACAGTGATGATCCTCCAG+AGG + tig0022499:3116-3135 Msa1400990:CDS 50.0%
ACTTCTAGGTTTGGCCCAGA+AGG + tig0022499:3159-3178 Msa1400990:CDS 50.0%
TGGAGACACCAAGAAGGGAA+AGG + tig0022499:3239-3258 Msa1400990:CDS 50.0%
TCAGGCGTCAACCACAATAC+AGG - tig0022499:3345-3364 None:intergenic 50.0%
TGCCCATAGAAGGCAACTAC+AGG - tig0022499:3577-3596 None:intergenic 50.0%
CTGAATTTGGCCAGTCGCTT+AGG + tig0022499:3647-3666 Msa1400990:intron 50.0%
AATGAATAGAAGGCAGGGGG+CGG - tig0022499:3936-3955 None:intergenic 50.0%
! GTGTGTCACTCTTTGTGCTG+TGG + tig0022499:4232-4251 Msa1400990:intron 50.0%
GTGACAAGCACCCTGATAGT+AGG - tig0022499:4429-4448 None:intergenic 50.0%
TGAGGAGCTTCAGCCAATAG+AGG + tig0022499:4461-4480 Msa1400990:CDS 50.0%
AAATGTGCAGGGCTGGAAAG+TGG - tig0022499:4498-4517 None:intergenic 50.0%
! TTCCAGCCCTGCACATTTTC+AGG + tig0022499:4500-4519 Msa1400990:CDS 50.0%
ATCCTGAAAATGTGCAGGGC+TGG - tig0022499:4505-4524 None:intergenic 50.0%
TGCCAAATCCAAGGAGTCAG+AGG + tig0022499:4524-4543 Msa1400990:CDS 50.0%
GCCAAATCCAAGGAGTCAGA+GGG + tig0022499:4525-4544 Msa1400990:CDS 50.0%
CCAAATCCAAGGAGTCAGAG+GGG + tig0022499:4526-4545 Msa1400990:CDS 50.0%
ACCTGCAGACTACAAATGGG+TGG + tig0022499:4647-4666 Msa1400990:CDS 50.0%
TCCACCCATTTGTAGTCTGC+AGG - tig0022499:4651-4670 None:intergenic 50.0%
GAAACATAAGAAGCCGCCAG+TGG + tig0022499:4719-4738 Msa1400990:CDS 50.0%
TCTCCAGATTTAGCCACTGG+CGG - tig0022499:4735-4754 None:intergenic 50.0%
CCATCTCCAGATTTAGCCAC+TGG - tig0022499:4738-4757 None:intergenic 50.0%
CCAGTGGCTAAATCTGGAGA+TGG + tig0022499:4735-4754 Msa1400990:CDS 50.0%
CACCAACCTAAGCTCAGCTC+AGG + tig0022499:1384-1403 Msa1400990:five_prime_UTR 55.0%
CTTGCAACTGCCAAGTGAGC+AGG - tig0022499:1929-1948 None:intergenic 55.0%
GACGTGACCATGCTGCTCTT+AGG + tig0022499:1948-1967 Msa1400990:CDS 55.0%
CAATGCGCCTAAGAGCAGCA+TGG - tig0022499:1958-1977 None:intergenic 55.0%
AGCCTTAGCAAGCTGAGGCA+GGG - tig0022499:1987-2006 None:intergenic 55.0%
TCACCAGCCTTAGCAAGCTG+AGG - tig0022499:1992-2011 None:intergenic 55.0%
!! TCAGCTTGCTAAGGCTGGTG+AGG + tig0022499:1991-2010 Msa1400990:CDS 55.0%
TGAAGTGGCGTCTCTCTAGC+AGG - tig0022499:2094-2113 None:intergenic 55.0%
TTCACCTTGCCGTGCGTCTT+AGG + tig0022499:2110-2129 Msa1400990:CDS 55.0%
TCACCTTGCCGTGCGTCTTA+GGG + tig0022499:2111-2130 Msa1400990:CDS 55.0%
! TGGTTGGAGTGCTCTCCAAG+AGG + tig0022499:2195-2214 Msa1400990:CDS 55.0%
! TTGGAGTGCTCTCCAAGAGG+CGG + tig0022499:2198-2217 Msa1400990:CDS 55.0%
CTCTAGTGCAAACCGCCTCT+TGG - tig0022499:2213-2232 None:intergenic 55.0%
AGAGGCGGTTTGCACTAGAG+AGG + tig0022499:2213-2232 Msa1400990:CDS 55.0%
! CGTGCTGATATGACCCTAGC+TGG + tig0022499:2445-2464 Msa1400990:CDS 55.0%
ACAAATGCCTTGGAAGGGGC+TGG + tig0022499:2601-2620 Msa1400990:CDS 55.0%
TTGTGTACCAGCCCCTTCCA+AGG - tig0022499:2611-2630 None:intergenic 55.0%
!! CGATGATGTACTGACTGCCG+AGG + tig0022499:2912-2931 Msa1400990:CDS 55.0%
GTTGCCTTCTATGGGCAGTG+CGG + tig0022499:3580-3599 Msa1400990:intron 55.0%
TTGCCTTCTATGGGCAGTGC+GGG + tig0022499:3581-3600 Msa1400990:intron 55.0%
TATCCCGCACTGCCCATAGA+AGG - tig0022499:3587-3606 None:intergenic 55.0%
ATGAATAGAAGGCAGGGGGC+GGG - tig0022499:3935-3954 None:intergenic 55.0%
CCCCTCTGACTCCTTGGATT+TGG - tig0022499:4529-4548 None:intergenic 55.0%
GGTCCGCGTCATGGATTTCA+TGG + tig0022499:4547-4566 Msa1400990:CDS 55.0%
TCATGGATGAAAGGAGGCCG+CGG + tig0022499:4564-4583 Msa1400990:CDS 55.0%
TCTGTGACTGTCAGAGTCGC+TGG - tig0022499:4598-4617 None:intergenic 55.0%
AAGCCGCCAGTGGCTAAATC+TGG + tig0022499:4729-4748 Msa1400990:CDS 55.0%
CACCAACCTAAGCTCAGCTC+AGG + tig0022499:1384-1403 Msa1400990:five_prime_UTR 55.0%
CTTGCAACTGCCAAGTGAGC+AGG - tig0022499:1929-1948 None:intergenic 55.0%
GACGTGACCATGCTGCTCTT+AGG + tig0022499:1948-1967 Msa1400990:CDS 55.0%
CAATGCGCCTAAGAGCAGCA+TGG - tig0022499:1958-1977 None:intergenic 55.0%
AGCCTTAGCAAGCTGAGGCA+GGG - tig0022499:1987-2006 None:intergenic 55.0%
TCACCAGCCTTAGCAAGCTG+AGG - tig0022499:1992-2011 None:intergenic 55.0%
!! TCAGCTTGCTAAGGCTGGTG+AGG + tig0022499:1991-2010 Msa1400990:CDS 55.0%
TGAAGTGGCGTCTCTCTAGC+AGG - tig0022499:2094-2113 None:intergenic 55.0%
TTCACCTTGCCGTGCGTCTT+AGG + tig0022499:2110-2129 Msa1400990:CDS 55.0%
TCACCTTGCCGTGCGTCTTA+GGG + tig0022499:2111-2130 Msa1400990:CDS 55.0%
! TGGTTGGAGTGCTCTCCAAG+AGG + tig0022499:2195-2214 Msa1400990:CDS 55.0%
! TTGGAGTGCTCTCCAAGAGG+CGG + tig0022499:2198-2217 Msa1400990:CDS 55.0%
CTCTAGTGCAAACCGCCTCT+TGG - tig0022499:2213-2232 None:intergenic 55.0%
AGAGGCGGTTTGCACTAGAG+AGG + tig0022499:2213-2232 Msa1400990:CDS 55.0%
! CGTGCTGATATGACCCTAGC+TGG + tig0022499:2445-2464 Msa1400990:CDS 55.0%
ACAAATGCCTTGGAAGGGGC+TGG + tig0022499:2601-2620 Msa1400990:CDS 55.0%
TTGTGTACCAGCCCCTTCCA+AGG - tig0022499:2611-2630 None:intergenic 55.0%
!! CGATGATGTACTGACTGCCG+AGG + tig0022499:2912-2931 Msa1400990:CDS 55.0%
GTTGCCTTCTATGGGCAGTG+CGG + tig0022499:3580-3599 Msa1400990:intron 55.0%
TTGCCTTCTATGGGCAGTGC+GGG + tig0022499:3581-3600 Msa1400990:intron 55.0%
TATCCCGCACTGCCCATAGA+AGG - tig0022499:3587-3606 None:intergenic 55.0%
ATGAATAGAAGGCAGGGGGC+GGG - tig0022499:3935-3954 None:intergenic 55.0%
CCCCTCTGACTCCTTGGATT+TGG - tig0022499:4529-4548 None:intergenic 55.0%
GGTCCGCGTCATGGATTTCA+TGG + tig0022499:4547-4566 Msa1400990:CDS 55.0%
TCATGGATGAAAGGAGGCCG+CGG + tig0022499:4564-4583 Msa1400990:CDS 55.0%
TCTGTGACTGTCAGAGTCGC+TGG - tig0022499:4598-4617 None:intergenic 55.0%
AAGCCGCCAGTGGCTAAATC+TGG + tig0022499:4729-4748 Msa1400990:CDS 55.0%
ACGGTGTAGGAGCTGCGAAG+AGG + tig0022499:1846-1865 Msa1400990:CDS 60.0%
CGGTGTAGGAGCTGCGAAGA+GGG + tig0022499:1847-1866 Msa1400990:CDS 60.0%
!! TGCCCTGCCTCAGCTTGCTA+AGG + tig0022499:1982-2001 Msa1400990:CDS 60.0%
CAGCCTTAGCAAGCTGAGGC+AGG - tig0022499:1988-2007 None:intergenic 60.0%
!! CTGCCTCAGCTTGCTAAGGC+TGG + tig0022499:1986-2005 Msa1400990:CDS 60.0%
AGACGCACGGCAAGGTGAAG+TGG - tig0022499:2109-2128 None:intergenic 60.0%
GATCCCTAAGACGCACGGCA+AGG - tig0022499:2117-2136 None:intergenic 60.0%
TGATGGCTGCTGGTGCGGAT+TGG + tig0022499:2155-2174 Msa1400990:CDS 60.0%
TGAATAGAAGGCAGGGGGCG+GGG - tig0022499:3934-3953 None:intergenic 60.0%
CATGGATGAAAGGAGGCCGC+GGG + tig0022499:4565-4584 Msa1400990:CDS 60.0%
ATGGATGAAAGGAGGCCGCG+GGG + tig0022499:4566-4585 Msa1400990:CDS 60.0%
ACGGTGTAGGAGCTGCGAAG+AGG + tig0022499:1846-1865 Msa1400990:CDS 60.0%
CGGTGTAGGAGCTGCGAAGA+GGG + tig0022499:1847-1866 Msa1400990:CDS 60.0%
!! TGCCCTGCCTCAGCTTGCTA+AGG + tig0022499:1982-2001 Msa1400990:CDS 60.0%
CAGCCTTAGCAAGCTGAGGC+AGG - tig0022499:1988-2007 None:intergenic 60.0%
!! CTGCCTCAGCTTGCTAAGGC+TGG + tig0022499:1986-2005 Msa1400990:CDS 60.0%
AGACGCACGGCAAGGTGAAG+TGG - tig0022499:2109-2128 None:intergenic 60.0%
GATCCCTAAGACGCACGGCA+AGG - tig0022499:2117-2136 None:intergenic 60.0%
TGATGGCTGCTGGTGCGGAT+TGG + tig0022499:2155-2174 Msa1400990:CDS 60.0%
TGAATAGAAGGCAGGGGGCG+GGG - tig0022499:3934-3953 None:intergenic 60.0%
CATGGATGAAAGGAGGCCGC+GGG + tig0022499:4565-4584 Msa1400990:CDS 60.0%
ATGGATGAAAGGAGGCCGCG+GGG + tig0022499:4566-4585 Msa1400990:CDS 60.0%
CAGGGGGCGGGGATGAAAAC+TGG - tig0022499:3923-3942 None:intergenic 65.0%
AGTCAGAGGGGTCCGCGTCA+TGG + tig0022499:4538-4557 Msa1400990:CDS 65.0%
TGGATGAAAGGAGGCCGCGG+GGG + tig0022499:4567-4586 Msa1400990:CDS 65.0%
TGGAGTGCATCGCAGCACCG+AGG + tig0022499:4755-4774 Msa1400990:CDS 65.0%
CAGGGGGCGGGGATGAAAAC+TGG - tig0022499:3923-3942 None:intergenic 65.0%
AGTCAGAGGGGTCCGCGTCA+TGG + tig0022499:4538-4557 Msa1400990:CDS 65.0%
TGGATGAAAGGAGGCCGCGG+GGG + tig0022499:4567-4586 Msa1400990:CDS 65.0%
TGGAGTGCATCGCAGCACCG+AGG + tig0022499:4755-4774 Msa1400990:CDS 65.0%
CGCGGACCCCTCTGACTCCT+TGG - tig0022499:4535-4554 None:intergenic 70.0%
GGATGAAAGGAGGCCGCGGG+GGG + tig0022499:4568-4587 Msa1400990:CDS 70.0%
CGCGGACCCCTCTGACTCCT+TGG - tig0022499:4535-4554 None:intergenic 70.0%
GGATGAAAGGAGGCCGCGGG+GGG + tig0022499:4568-4587 Msa1400990:CDS 70.0%
AGTCGCTGGACTGCCCCCCG+CGG - tig0022499:4584-4603 None:intergenic 75.0%
AGTCGCTGGACTGCCCCCCG+CGG - tig0022499:4584-4603 None:intergenic 75.0%
Chromosome Type Strat End Strand Name
tig0022499 gene 1204 5309 1204 ID=Msa1400990;Name=Msa1400990
tig0022499 mRNA 1204 5309 1204 ID=Msa1400990-mRNA-1;Parent=Msa1400990;Name=Msa1400990-mRNA-1;_AED=0.01;_eAED=0.01;_QI=437|1|1|1|0.5|0.33|3|518|684
tig0022499 exon 1204 1405 1204 ID=Msa1400990-mRNA-1:exon:18067;Parent=Msa1400990-mRNA-1
tig0022499 exon 1583 3488 1583 ID=Msa1400990-mRNA-1:exon:18068;Parent=Msa1400990-mRNA-1
tig0022499 exon 4408 5309 4408 ID=Msa1400990-mRNA-1:exon:18069;Parent=Msa1400990-mRNA-1
tig0022499 five_prime_UTR 1204 1405 1204 ID=Msa1400990-mRNA-1:five_prime_utr;Parent=Msa1400990-mRNA-1
tig0022499 five_prime_UTR 1583 1817 1583 ID=Msa1400990-mRNA-1:five_prime_utr;Parent=Msa1400990-mRNA-1
tig0022499 CDS 1818 3488 1818 ID=Msa1400990-mRNA-1:cds;Parent=Msa1400990-mRNA-1
tig0022499 CDS 4408 4791 4408 ID=Msa1400990-mRNA-1:cds;Parent=Msa1400990-mRNA-1
tig0022499 three_prime_UTR 4792 5309 4792 ID=Msa1400990-mRNA-1:three_prime_utr;Parent=Msa1400990-mRNA-1
Gene Sequence

>Msa1400990

ATGGAAGCAAATGGAGTTGTACATGATAACGGTGTAGGAGCTGCGAAGAGGGAAAAGAGAGAGGTAGGAGATAAATCCATGGAGGATTTGACTAAATATACACACAGTCCTGCTCACTTGGCAGTTGCAAGACGTGACCATGCTGCTCTTAGGCGCATTGTTACTGCCCTGCCTCAGCTTGCTAAGGCTGGTGAGGTTAAAAATGAAGCTGAATCTCTTGCTGCTGAACTTCGAGCTGATGAGGTATCGTCTGTTATTGATCGTCGTGATGTACCTGCTAGAGAGACGCCACTTCACCTTGCCGTGCGTCTTAGGGATCATGTCTCTGCTGAGATATTGATGGCTGCTGGTGCGGATTGGAGTTTACAGAACGAGCATGGTTGGAGTGCTCTCCAAGAGGCGGTTTGCACTAGAGAGGAAGCTATTGCTATGATTATTGCACGCCACTATCAACCTTTGGCTTGGGCTAAATGGTGTCGCAGACTTCCCCGTATTGTTGCTTCAGCAACTCGTATTCGTGATTTTTATATGGAGATAACTTTTCATTTTGAAAGCTCTGTAATTCCGTTTATTGGACGCATAGCCCCTTCTGATACTTATCGAATATGGAAGCGTGGTTCTAATCTCCGTGCTGATATGACCCTAGCTGGTTTTGATGGTCTGCGCATCCAACGATCAGACCAAACATTTTTGTTCCTTGGAGAGGGTTATACTTCAGAGGACGGTAATTTAACACTGCCACATGGTTCTTTGCTTGCTCTTTCTCATAAGGAGAAGGAAGTTACAAATGCCTTGGAAGGGGCTGGTACACAACCAACAGAAGCTGAAGTTGCCCATGAAGTCTCCTTGATGTCTCAGACAAATATGTACAGACCAGGTATTGATGTTACTCAGGCTGAGCTTATTCCTCATTTATCTTGGAGGCGTCAAGAGAAGACAGAGATGGTTGGGAATTGGAAAGCAAAAGTTTATGACATGCTTAATGTGATGGTGAGTGTGAAATCAAGACGGGTTCCAGGTGCTATGACAGATGAAGAGCTTTTTGCTGTGGAGGATGGAGAAAGTATGATAAATGGGGAAAACAATGATGAGTACGATGATGTACTGACTGCCGAGGAAAGAATGCAATTAGATTCTGCACTAAGAATGGGGAACTCTGACGCTGCTTGTGAAGATGAAGAGCATGGGGTTGATGGTCAAGAAAATGGTTCATCAGCTTCCAATGAGAATTTTGAAGCCAATGGTGTGGTTAAAGAGAAGAAGAGCTGGTTTGGTTGGAACAAGAAAAGTTTGAAAAGCAACAGTGATGATCCTCCAGAGGATTTAAAAACATCAAAGAAAACTTCTAGGTTTGGCCCAGAAGGTAGCAACCAGAGATTGGCTGATCAAAAGATAGCATCCGAGTTTCTGAAGGATGATAGTGGAGACACCAAGAAGGGAAAGGATAAAAACATTAAAAAGAAGAAGAAGAAAGGAGCAGTTAGCGAGACTAAGACCGAGAGTGAGTATAAAAAGGGTTTAAGACCTGTATTGTGGTTGACGCCTGACTTCCCATTGAAAACCGACGAACTTCTGCCTCTACTTGACATTTTAGCAAATAAGGTTAAAGCTATCAGAAGACTACGAGAGCTTTTGACAACTAAGCTTCCTCAAGGAACTTTTCCTGTCAAGGTTGCTATCCCCATAGTTCCTACTATCAGGGTGCTTGTCACTTTTACAAAATTTGAGGAGCTTCAGCCAATAGAGGAGTTTTCAACACCACTTTCCAGCCCTGCACATTTTCAGGATGCCAAATCCAAGGAGTCAGAGGGGTCCGCGTCATGGATTTCATGGATGAAAGGAGGCCGCGGGGGGCAGTCCAGCGACTCTGACAGTCACAGATATAAGGATGAAGCTGATCCTTTCAGCATACCTGCAGACTACAAATGGGTGGACGCCAATGAAAAGAAACGACGAATGAAGGCGAAGAAAGCCAAAAGTAAGAAACATAAGAAGCCGCCAGTGGCTAAATCTGGAGATGGAGTGCATCGCAGCACCGAGGACATAGAAGAATAG
Protein sequence

>Msa1400990

MEANGVVHDNGVGAAKREKREVGDKSMEDLTKYTHSPAHLAVARRDHAALRRIVTALPQLAKAGEVKNEAESLAAELRADEVSSVIDRRDVPARETPLHLAVRLRDHVSAEILMAAGADWSLQNEHGWSALQEAVCTREEAIAMIIARHYQPLAWAKWCRRLPRIVASATRIRDFYMEITFHFESSVIPFIGRIAPSDTYRIWKRGSNLRADMTLAGFDGLRIQRSDQTFLFLGEGYTSEDGNLTLPHGSLLALSHKEKEVTNALEGAGTQPTEAEVAHEVSLMSQTNMYRPGIDVTQAELIPHLSWRRQEKTEMVGNWKAKVYDMLNVMVSVKSRRVPGAMTDEELFAVEDGESMINGENNDEYDDVLTAEERMQLDSALRMGNSDAACEDEEHGVDGQENGSSASNENFEANGVVKEKKSWFGWNKKSLKSNSDDPPEDLKTSKKTSRFGPEGSNQRLADQKIASEFLKDDSGDTKKGKDKNIKKKKKKGAVSETKTESEYKKGLRPVLWLTPDFPLKTDELLPLLDILANKVKAIRRLRELLTTKLPQGTFPVKVAIPIVPTIRVLVTFTKFEELQPIEEFSTPLSSPAHFQDAKSKESEGSASWISWMKGGRGGQSSDSDSHRYKDEADPFSIPADYKWVDANEKKRRMKAKKAKSKKHKKPPVAKSGDGVHRSTEDIEE*