Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1402720 | XP_003601097.2 | 92.979 | 470 | 23 | 1 | 1 | 460 | 1 | 470 | 0.0 | 902 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1402720 | sp|Q7XJS0|ASHR1_ARATH | 61.895 | 475 | 167 | 2 | 1 | 461 | 1 | 475 | 0.0 | 621 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1402720 | G7J3L4 | 92.979 | 470 | 23 | 1 | 1 | 460 | 1 | 470 | 0.0 | 902 |
| Gene ID | Type | Classification |
|---|---|---|
| Msa1402720 | TR | SET |
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0370100 | Msa1402720 | 0.802289 | 6.021273e-49 | -8.615850e-47 |
| Msa0417520 | Msa1402720 | 0.841277 | 5.238727e-58 | -8.615850e-47 |
| Msa0509890 | Msa1402720 | 0.995343 | 2.494164e-215 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1402720 | MtrunA17_Chr3g0115061 | 92.979 | 470 | 23 | 1 | 1 | 460 | 1 | 470 | 0.0 | 902 |
| Msa1402720 | MtrunA17_Chr8g0375381 | 24.451 | 319 | 165 | 13 | 13 | 277 | 8 | 304 | 3.24e-13 | 71.2 |
| Msa1402720 | MtrunA17_Chr3g0128421 | 28.205 | 156 | 95 | 4 | 172 | 325 | 459 | 599 | 1.10e-11 | 67.4 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1402720 | AT2G17900.1 | 61.895 | 475 | 167 | 2 | 1 | 461 | 6 | 480 | 0.0 | 621 |
Find 135 sgRNAs with CRISPR-Local
Find 336 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| ATCTCTTTAATATTGATTTC+AGG | 0.234425 | tig0022891:+36202 | None:intergenic |
| TCTTCACTTCACTCGTTTAT+CGG | 0.237874 | tig0022891:+37412 | None:intergenic |
| ATTTAATTAACGGGTTATAT+CGG | 0.277974 | tig0022891:-37493 | Msa1402720:five_prime_UTR |
| CTCTTACTAACCCACATTCT+TGG | 0.284514 | tig0022891:+34671 | None:intergenic |
| TAAAATGTAAAACGGATAAA+AGG | 0.318191 | tig0022891:+32035 | None:intergenic |
| GGTTAAGCAGAATATGAGTT+TGG | 0.325261 | tig0022891:-37521 | Msa1402720:five_prime_UTR |
| ACTCTGGAAATTTGCTTAGA+TGG | 0.326933 | tig0022891:-32256 | Msa1402720:three_prime_UTR |
| ACTTTACCATATTTAACTTC+TGG | 0.333208 | tig0022891:+32230 | None:intergenic |
| CAAATCATTATATAACATTA+AGG | 0.333564 | tig0022891:+32140 | None:intergenic |
| TGATCTTGATATAGGTATCT+TGG | 0.355193 | tig0022891:-32538 | Msa1402720:intron |
| ATACTGAAAATTTATATGTT+GGG | 0.361187 | tig0022891:-37558 | Msa1402720:five_prime_UTR |
| ATCAATAGTTCCTTCACTAA+TGG | 0.370780 | tig0022891:+32442 | None:intergenic |
| AAGTTAAATATGGTAAAGTA+TGG | 0.374345 | tig0022891:-32226 | Msa1402720:three_prime_UTR |
| TTGGGTATAATTTAATTAAC+GGG | 0.385288 | tig0022891:-37502 | Msa1402720:five_prime_UTR |
| TAAAAGGAACTATTCTCAAA+TGG | 0.386662 | tig0022891:+32051 | None:intergenic |
| GGTTTCTTGCTCCGCACAAC+TGG | 0.393388 | tig0022891:-34871 | Msa1402720:intron |
| CCAGCTGTTCACCCTTTGCT+TGG | 0.395564 | tig0022891:-33035 | Msa1402720:CDS |
| CAAGTTAGTGGAGGCATTAG+TGG | 0.396160 | tig0022891:-36391 | Msa1402720:CDS |
| TGGTCTCCAGAAGTTAAATA+TGG | 0.398324 | tig0022891:-32236 | Msa1402720:three_prime_UTR |
| CGAGAAAATGCAATTCTAGA+AGG | 0.401251 | tig0022891:-34922 | Msa1402720:CDS |
| TTTGGGTATAATTTAATTAA+CGG | 0.402778 | tig0022891:-37503 | Msa1402720:five_prime_UTR |
| CTACTACTATTGCTACTATC+TGG | 0.403144 | tig0022891:+37635 | None:intergenic |
| GATGGCATACTTTGATAGAT+TGG | 0.406419 | tig0022891:+33609 | None:intergenic |
| TGGTTACCTGTGATTGATAA+TGG | 0.407535 | tig0022891:+35982 | None:intergenic |
| AAAAGGAACTATTCTCAAAT+GGG | 0.409119 | tig0022891:+32052 | None:intergenic |
| TGTAATCACACTCATTCATA+TGG | 0.415406 | tig0022891:-37696 | Msa1402720:five_prime_UTR |
| TGACAGTGAGTTAAGACCTC+TGG | 0.417510 | tig0022891:-36029 | Msa1402720:CDS |
| TTTAATTAACGGGTTATATC+GGG | 0.424062 | tig0022891:-37492 | Msa1402720:five_prime_UTR |
| ATACTTGTGGAAAACTTGAA+TGG | 0.426325 | tig0022891:-33001 | Msa1402720:intron |
| AATACTGAAAATTTATATGT+TGG | 0.431010 | tig0022891:-37559 | Msa1402720:five_prime_UTR |
| AATTTAAACTTTCCAGTAGC+AGG | 0.431477 | tig0022891:-32098 | Msa1402720:three_prime_UTR |
| TGCATCAAATTGATCGAGAA+AGG | 0.433641 | tig0022891:+34332 | None:intergenic |
| GTTAAGCAGAATATGAGTTT+GGG | 0.438922 | tig0022891:-37520 | Msa1402720:five_prime_UTR |
| ACCGATATCACAGCTGCTTC+TGG | 0.444577 | tig0022891:-32344 | Msa1402720:three_prime_UTR |
| GAGTTAAGACCTCTGGGAAC+AGG | 0.450124 | tig0022891:-36022 | Msa1402720:CDS |
| GAGTAATATAAAATAAATAA+AGG | 0.451846 | tig0022891:-37456 | Msa1402720:five_prime_UTR |
| CCAAGCAAAGGGTGAACAGC+TGG | 0.455085 | tig0022891:+33035 | None:intergenic |
| TTTGCAGTCATTAATGAAGC+TGG | 0.455096 | tig0022891:-33673 | Msa1402720:intron |
| GTTCTTCAATTCATAACGTC+AGG | 0.459168 | tig0022891:+37606 | None:intergenic |
| GGGGACAAACACAAGTGAAT+AGG | 0.464095 | tig0022891:+35089 | None:intergenic |
| TGCTCAAACTTTATCTTCGA+AGG | 0.464527 | tig0022891:-36726 | Msa1402720:CDS |
| CTGTGCAACATGTGCCTAAA+GGG | 0.466513 | tig0022891:-35824 | Msa1402720:CDS |
| TACTGAAAATTTATATGTTG+GGG | 0.468405 | tig0022891:-37557 | Msa1402720:five_prime_UTR |
| AGTTTCCACCATCTCAGAAA+AGG | 0.468581 | tig0022891:-37343 | Msa1402720:CDS |
| ATGATTGCACTTGTTTACTC+TGG | 0.471129 | tig0022891:-32272 | Msa1402720:three_prime_UTR |
| ATAAAGGAAGGGAAAGAAAG+TGG | 0.472255 | tig0022891:-37440 | Msa1402720:five_prime_UTR |
| CATTAATGAAGCTGGAGTAT+TGG | 0.474560 | tig0022891:-33665 | Msa1402720:CDS |
| TACAAACAAGCCACTGGAGC+TGG | 0.475092 | tig0022891:-32321 | Msa1402720:three_prime_UTR |
| ACATTAAGGCTGGCTGATGA+AGG | 0.476956 | tig0022891:+32154 | None:intergenic |
| ACCAGAAGCAGCTGTGATAT+CGG | 0.482268 | tig0022891:+32343 | None:intergenic |
| ATAGATACCTCAGTCCCTTT+AGG | 0.485587 | tig0022891:+35810 | None:intergenic |
| TTGAGTTGGAACACAAACAT+AGG | 0.489336 | tig0022891:+37139 | None:intergenic |
| CTTGCAGCTAAAATGTAAAA+CGG | 0.490916 | tig0022891:+32027 | None:intergenic |
| TTGTTTCCATTATCAATCAC+AGG | 0.492390 | tig0022891:-35988 | Msa1402720:intron |
| GGCTTGCAATATTATACTTG+TGG | 0.493062 | tig0022891:-33014 | Msa1402720:CDS |
| AATATAAAATAAATAAAGGA+AGG | 0.494622 | tig0022891:-37452 | Msa1402720:five_prime_UTR |
| CCTTAGTATATCCACTGCCT+TGG | 0.497065 | tig0022891:+32486 | None:intergenic |
| GAACACAAACATAGGGCTCT+TGG | 0.499515 | tig0022891:+37147 | None:intergenic |
| GAGTGAAGTGAAGACGGAAA+TGG | 0.501432 | tig0022891:-37403 | Msa1402720:exon |
| TTTGTAAGAGGCTTCTGCAC+GGG | 0.511710 | tig0022891:+32405 | None:intergenic |
| GATCATTCCAAGCACTGCTA+TGG | 0.511797 | tig0022891:-36421 | Msa1402720:CDS |
| TCTTAACTCACTGTCACAAA+TGG | 0.513188 | tig0022891:+36036 | None:intergenic |
| CTCATATTCTGCTTAACCTC+GGG | 0.513380 | tig0022891:+37526 | None:intergenic |
| GCATTTCAATGCCAAGAATG+TGG | 0.517194 | tig0022891:-34682 | Msa1402720:CDS |
| TAAATCATTGACCAAGGCAG+TGG | 0.519906 | tig0022891:-32497 | Msa1402720:CDS |
| AAGCACTGTGACTCGACAAA+AGG | 0.521126 | tig0022891:-35128 | Msa1402720:CDS |
| TTGTCCCCTCTGTTCTAAAG+TGG | 0.523368 | tig0022891:-35074 | Msa1402720:intron |
| GAAGGAACTATTGATGATGT+TGG | 0.529169 | tig0022891:-32434 | Msa1402720:CDS |
| CCAAGGCAGTGGATATACTA+AGG | 0.529257 | tig0022891:-32486 | Msa1402720:CDS |
| GCATCAAATTGATCGAGAAA+GGG | 0.531480 | tig0022891:+34333 | None:intergenic |
| ATAAGTTATATAGAGACAGC+TGG | 0.532422 | tig0022891:-35151 | Msa1402720:CDS |
| AGGATACTGCCACTAGAAGA+AGG | 0.532430 | tig0022891:+34586 | None:intergenic |
| AAGTACCACTTTAGAACAGA+GGG | 0.532968 | tig0022891:+35069 | None:intergenic |
| AAATATGGTAAAGTATGGAT+TGG | 0.533262 | tig0022891:-32221 | Msa1402720:three_prime_UTR |
| GTTTCCACCATCTCAGAAAA+GGG | 0.534104 | tig0022891:-37342 | Msa1402720:CDS |
| TCATTATATAACATTAAGGC+TGG | 0.534161 | tig0022891:+32144 | None:intergenic |
| TGAGTTGGAACACAAACATA+GGG | 0.536392 | tig0022891:+37140 | None:intergenic |
| TGACATCAAAGAGGAGCAGC+TGG | 0.537970 | tig0022891:-36272 | Msa1402720:CDS |
| CTGCCTACCCAATTCAGTGT+TGG | 0.538934 | tig0022891:-35877 | Msa1402720:CDS |
| TAATATTGCAAGCCAAGCAA+AGG | 0.544619 | tig0022891:+33023 | None:intergenic |
| GCTTCTAAGCCTTCTTCTAG+TGG | 0.547425 | tig0022891:-34595 | Msa1402720:CDS |
| GATTTAAACAATCAATGAAA+GGG | 0.549170 | tig0022891:-32005 | Msa1402720:three_prime_UTR |
| AAGTTTGAGCATCAACCGTA+TGG | 0.550663 | tig0022891:+36738 | None:intergenic |
| CAAAAGAAGAGTAGAATGGC+GGG | 0.553721 | tig0022891:-32375 | Msa1402720:exon |
| TAGTTGTCCATAGCAGTGCT+TGG | 0.554117 | tig0022891:+36414 | None:intergenic |
| TATGGACAACTACAAGTTAG+TGG | 0.554822 | tig0022891:-36403 | Msa1402720:CDS |
| AGATTTAAACAATCAATGAA+AGG | 0.561410 | tig0022891:-32006 | Msa1402720:three_prime_UTR |
| GACAGTGAGTTAAGACCTCT+GGG | 0.564404 | tig0022891:-36028 | Msa1402720:CDS |
| TGATTGATAATGGAAACAAC+AGG | 0.566394 | tig0022891:+35992 | None:intergenic |
| CATTTCAATGCCAAGAATGT+GGG | 0.570052 | tig0022891:-34681 | Msa1402720:CDS |
| CATACTTTGATAGATTGGTA+TGG | 0.571289 | tig0022891:+33614 | None:intergenic |
| TTGAGCATCAACCGTATGGA+TGG | 0.572598 | tig0022891:+36742 | None:intergenic |
| TATAGGTATCTTGGAGACAC+AGG | 0.573913 | tig0022891:-32529 | Msa1402720:intron |
| TTGTACACTTAATACTGCAA+TGG | 0.575595 | tig0022891:-36225 | Msa1402720:CDS |
| TTGAATGTCAAGCACTCTCA+AGG | 0.577097 | tig0022891:-36795 | Msa1402720:CDS |
| AATATTGCAAGCCAAGCAAA+GGG | 0.578542 | tig0022891:+33024 | None:intergenic |
| TCATCAAAAGAAGAGTAGAA+TGG | 0.582008 | tig0022891:-32379 | Msa1402720:exon |
| GCTGTGCAACATGTGCCTAA+AGG | 0.597001 | tig0022891:-35825 | Msa1402720:CDS |
| TTCTGGTACAAACAAGCCAC+TGG | 0.598173 | tig0022891:-32327 | Msa1402720:three_prime_UTR |
| GCTGGTGTTGTATGCACAGA+TGG | 0.598430 | tig0022891:-36254 | Msa1402720:CDS |
| CATTAAGGCTGGCTGATGAA+GGG | 0.599694 | tig0022891:+32155 | None:intergenic |
| ACTACTAAAGATTTCCACCC+AGG | 0.601540 | tig0022891:-37306 | Msa1402720:intron |
| ACTCATATTCTGCTTAACCT+CGG | 0.607813 | tig0022891:+37525 | None:intergenic |
| TGAAGTGAAGACGGAAATGG+AGG | 0.608547 | tig0022891:-37400 | Msa1402720:exon |
| GACAACGTGAGCATTTGCTA+AGG | 0.614070 | tig0022891:+37084 | None:intergenic |
| AAGGAAATTGCAAGATGACA+AGG | 0.615659 | tig0022891:-36707 | Msa1402720:intron |
| ATTCTGTGATCCAGCTCCAG+TGG | 0.617317 | tig0022891:+32311 | None:intergenic |
| ATATAAAATAAATAAAGGAA+GGG | 0.621972 | tig0022891:-37451 | Msa1402720:five_prime_UTR |
| TACAAAGACTCCATTAGTGA+AGG | 0.622523 | tig0022891:-32452 | Msa1402720:CDS |
| ACTGAAAATTTATATGTTGG+GGG | 0.624966 | tig0022891:-37556 | Msa1402720:five_prime_UTR |
| ACTACACTTATGCCTCCTGA+TGG | 0.626456 | tig0022891:-31945 | None:intergenic |
| ATGTGGGTTAGTAAGAGACA+AGG | 0.627932 | tig0022891:-34665 | Msa1402720:CDS |
| CAATTTGATGCAAACACGAG+AGG | 0.630016 | tig0022891:-34321 | Msa1402720:CDS |
| ATTTGTAAGAGGCTTCTGCA+CGG | 0.631187 | tig0022891:+32404 | None:intergenic |
| TTTAGGTTATACCAGTTGTG+CGG | 0.631225 | tig0022891:+34860 | None:intergenic |
| AGCTATTAAATCATTGACCA+AGG | 0.634421 | tig0022891:-32503 | Msa1402720:CDS |
| AATCTGTTACACCATCCATA+CGG | 0.635943 | tig0022891:-36753 | Msa1402720:CDS |
| AAACCAACACTGAATTGGGT+AGG | 0.637837 | tig0022891:+35874 | None:intergenic |
| ATAAACGAGTGAAGTGAAGA+CGG | 0.639680 | tig0022891:-37409 | Msa1402720:five_prime_UTR |
| AAAGGAACTATTCTCAAATG+GGG | 0.640781 | tig0022891:+32053 | None:intergenic |
| ATTAACGGGTTATATCGGGT+CGG | 0.642736 | tig0022891:-37488 | Msa1402720:five_prime_UTR |
| GATATACTAAGGATTACTCA+TGG | 0.643148 | tig0022891:-32475 | Msa1402720:CDS |
| GGAACTATTGATGATGTTGG+AGG | 0.643675 | tig0022891:-32431 | Msa1402720:CDS |
| TCAAAAGAAGAGTAGAATGG+CGG | 0.649801 | tig0022891:-32376 | Msa1402720:exon |
| GAGAGAGAGAGTGACCTGGG+TGG | 0.653070 | tig0022891:+37292 | None:intergenic |
| AGACATGTCTGACATCAAAG+AGG | 0.653286 | tig0022891:-36281 | Msa1402720:CDS |
| ACATGTGCCTAAAGGGACTG+AGG | 0.674349 | tig0022891:-35817 | Msa1402720:intron |
| ATGATATTCAGAAATCGGAG+TGG | 0.676289 | tig0022891:-36831 | Msa1402720:intron |
| ATAGGTATCTTGGAGACACA+GGG | 0.676601 | tig0022891:-32528 | Msa1402720:intron |
| AGTCAGATTCTACCATCAGG+AGG | 0.680431 | tig0022891:+31933 | None:intergenic |
| TAAGTACCACTTTAGAACAG+AGG | 0.686937 | tig0022891:+35068 | None:intergenic |
| CGTTATGAATTGAAGAACAG+AGG | 0.693783 | tig0022891:-37601 | Msa1402720:five_prime_UTR |
| GGACAACTACAAGTTAGTGG+AGG | 0.710755 | tig0022891:-36400 | Msa1402720:CDS |
| GGATACAATCCTGTTCCCAG+AGG | 0.760315 | tig0022891:+36013 | None:intergenic |
| AGTACCACTTTAGAACAGAG+GGG | 0.783095 | tig0022891:+35070 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | GAGTAATATAAAATAAATAA+AGG | - | tig0022891:32213-32232 | Msa1402720:three_prime_UTR | 10.0% |
| !! | AATATAAAATAAATAAAGGA+AGG | - | tig0022891:32217-32236 | Msa1402720:three_prime_UTR | 10.0% |
| !! | ATATAAAATAAATAAAGGAA+GGG | - | tig0022891:32218-32237 | Msa1402720:three_prime_UTR | 10.0% |
| !!! | ATTAATTTAAAACTATTTGA+CGG | - | tig0022891:34414-34433 | Msa1402720:intron | 10.0% |
| !!! | TTTTGTTTTTAAATTATAGA+TGG | - | tig0022891:34960-34979 | Msa1402720:intron | 10.0% |
| !! | AAAAAATTTCAAACTTATTT+AGG | - | tig0022891:37691-37710 | Msa1402720:five_prime_UTR | 10.0% |
| !! | AATACTGAAAATTTATATGT+TGG | - | tig0022891:32110-32129 | Msa1402720:three_prime_UTR | 15.0% |
| !! | ATACTGAAAATTTATATGTT+GGG | - | tig0022891:32111-32130 | Msa1402720:three_prime_UTR | 15.0% |
| !! | TTTGGGTATAATTTAATTAA+CGG | - | tig0022891:32166-32185 | Msa1402720:three_prime_UTR | 15.0% |
| !!! | TATATCAACTAATTTAAGAT+TGG | + | tig0022891:33523-33542 | None:intergenic | 15.0% |
| !!! | TGTCATTTAAAGATTATTAA+TGG | - | tig0022891:33952-33971 | Msa1402720:intron | 15.0% |
| !!! | TCAGTCTTATATTTATAAAA+AGG | + | tig0022891:34890-34909 | None:intergenic | 15.0% |
| !! | TATACTAATGAATAGATATA+CGG | - | tig0022891:35596-35615 | Msa1402720:intron | 15.0% |
| !! | AAATCAATTATTGCATAAAT+GGG | + | tig0022891:35935-35954 | None:intergenic | 15.0% |
| !! | AAAATCAATTATTGCATAAA+TGG | + | tig0022891:35936-35955 | None:intergenic | 15.0% |
| !! | CAAATCATTATATAACATTA+AGG | + | tig0022891:37532-37551 | None:intergenic | 15.0% |
| !! | TACTGAAAATTTATATGTTG+GGG | - | tig0022891:32112-32131 | Msa1402720:three_prime_UTR | 20.0% |
| !! | TTGGGTATAATTTAATTAAC+GGG | - | tig0022891:32167-32186 | Msa1402720:three_prime_UTR | 20.0% |
| !!! | ATTTAATTAACGGGTTATAT+CGG | - | tig0022891:32176-32195 | Msa1402720:three_prime_UTR | 20.0% |
| !!! | AATGAATGATGTTTTTACTT+TGG | - | tig0022891:32470-32489 | Msa1402720:CDS | 20.0% |
| !! | TATGATATGATATGTTATTG+TGG | - | tig0022891:32807-32826 | Msa1402720:intron | 20.0% |
| !!! | TTTTGATGATATTCAGAAAT+CGG | - | tig0022891:32833-32852 | Msa1402720:intron | 20.0% |
| !!! | ATGTGAACAAAATTTAGTTT+TGG | - | tig0022891:32988-33007 | Msa1402720:intron | 20.0% |
| !!! | TTATCTTAAAGTTCTTTTTG+AGG | - | tig0022891:33121-33140 | Msa1402720:intron | 20.0% |
| !! | AAATACAGTAAAGCTTAAAA+AGG | + | tig0022891:33311-33330 | None:intergenic | 20.0% |
| !!! | ATCTCTTTAATATTGATTTC+AGG | + | tig0022891:33470-33489 | None:intergenic | 20.0% |
| !!! | GTATAGTAAGACATTATTTT+CGG | + | tig0022891:33731-33750 | None:intergenic | 20.0% |
| !!! | TTTTTGTAAAAGTTTCAGTT+AGG | - | tig0022891:34352-34371 | Msa1402720:CDS | 20.0% |
| !!! | TTTTGTAAAAGTTTCAGTTA+GGG | - | tig0022891:34353-34372 | Msa1402720:CDS | 20.0% |
| !!! | AATCTGAAATATTTTCTTGT+TGG | - | tig0022891:34635-34654 | Msa1402720:CDS | 20.0% |
| !! | CATAGTAATTTCAGTAAAAT+TGG | - | tig0022891:34666-34685 | Msa1402720:CDS | 20.0% |
| !! | TAAAATTGGAATGTTATCAT+TGG | - | tig0022891:34680-34699 | Msa1402720:CDS | 20.0% |
| !! | CTTATATTTATAAAAAGGAG+AGG | + | tig0022891:34885-34904 | None:intergenic | 20.0% |
| !!! | TTTTCTTTCTTATCCTTTAA+TGG | - | tig0022891:35179-35198 | Msa1402720:intron | 20.0% |
| !! | TGATAATCTACATATAGTTA+AGG | + | tig0022891:35262-35281 | None:intergenic | 20.0% |
| !!! | TTTCTCGATCATTTTATATA+TGG | + | tig0022891:35296-35315 | None:intergenic | 20.0% |
| !! | ACACATACATATATAGAAAA+GGG | + | tig0022891:35787-35806 | None:intergenic | 20.0% |
| !!! | ATTTTAGCAAAAATCATGTA+AGG | - | tig0022891:36246-36265 | Msa1402720:CDS | 20.0% |
| !!! | TCACACAGAATTATATTTTT+AGG | - | tig0022891:36389-36408 | Msa1402720:CDS | 20.0% |
| !!! | CACACAGAATTATATTTTTA+GGG | - | tig0022891:36390-36409 | Msa1402720:CDS | 20.0% |
| !!! | ACACAGAATTATATTTTTAG+GGG | - | tig0022891:36391-36410 | Msa1402720:CDS | 20.0% |
| !! | TAATACTATTGATAAATTGC+TGG | + | tig0022891:36994-37013 | None:intergenic | 20.0% |
| !! | AAGTTAAATATGGTAAAGTA+TGG | - | tig0022891:37443-37462 | Msa1402720:five_prime_UTR | 20.0% |
| !! | TAAAATGTAAAACGGATAAA+AGG | + | tig0022891:37637-37656 | None:intergenic | 20.0% |
| !! | AGATTTAAACAATCAATGAA+AGG | - | tig0022891:37663-37682 | Msa1402720:five_prime_UTR | 20.0% |
| !! | GATTTAAACAATCAATGAAA+GGG | - | tig0022891:37664-37683 | Msa1402720:five_prime_UTR | 20.0% |
| ! | ACTGAAAATTTATATGTTGG+GGG | - | tig0022891:32113-32132 | Msa1402720:three_prime_UTR | 25.0% |
| !!! | TTTAATTAACGGGTTATATC+GGG | - | tig0022891:32177-32196 | Msa1402720:three_prime_UTR | 25.0% |
| !! | TTTCTTATCATAAGTGTTGT+CGG | - | tig0022891:32651-32670 | Msa1402720:intron | 25.0% |
| ! | ACATTGACACTTATGATAAA+AGG | + | tig0022891:32706-32725 | None:intergenic | 25.0% |
| !!! | TTTAGTTTTGGTTAATGCAT+TGG | - | tig0022891:33000-33019 | Msa1402720:intron | 25.0% |
| ! | ACTTCATAAAATTGCATTTG+AGG | - | tig0022891:33093-33112 | Msa1402720:intron | 25.0% |
| ! | CTTCATAAAATTGCATTTGA+GGG | - | tig0022891:33094-33113 | Msa1402720:intron | 25.0% |
| ! | GGAACAAAAAATAAGTTAAG+TGG | + | tig0022891:33710-33729 | None:intergenic | 25.0% |
| !! | ATTTAAAACTATTTGACGGA+TGG | - | tig0022891:34418-34437 | Msa1402720:intron | 25.0% |
| !!! | TTCAGTTAAGTTAGTTTTGA+AGG | - | tig0022891:34707-34726 | Msa1402720:intron | 25.0% |
| !!! | TCAGTTAAGTTAGTTTTGAA+GGG | - | tig0022891:34708-34727 | Msa1402720:intron | 25.0% |
| !! | AAGATTATGATGTTCCTTTT+AGG | + | tig0022891:34829-34848 | None:intergenic | 25.0% |
| ! | AAAAAAGATTGGAATGCAAA+AGG | + | tig0022891:35163-35182 | None:intergenic | 25.0% |
| ! | GGATAAGAAAGAAAAAAGAT+TGG | + | tig0022891:35174-35193 | None:intergenic | 25.0% |
| ! | AAATCAATTTCCTTTGAACA+TGG | + | tig0022891:35214-35233 | None:intergenic | 25.0% |
| ! | TAATGAATAGATATACGGAT+TGG | - | tig0022891:35601-35620 | Msa1402720:intron | 25.0% |
| !!! | GATTGGTTTATATTCTACTT+TGG | - | tig0022891:35618-35637 | Msa1402720:intron | 25.0% |
| ! | CACACATACATATATAGAAA+AGG | + | tig0022891:35788-35807 | None:intergenic | 25.0% |
| !!! | AAAAATCATGTAAGGTATTG+TGG | - | tig0022891:36254-36273 | Msa1402720:CDS | 25.0% |
| ! | AGATTAAATCCACAATGAAA+AGG | - | tig0022891:36286-36305 | Msa1402720:intron | 25.0% |
| !!! | CACAGAATTATATTTTTAGG+GGG | - | tig0022891:36392-36411 | Msa1402720:CDS | 25.0% |
| !!! | ACAGAATTATATTTTTAGGG+GGG | - | tig0022891:36393-36412 | Msa1402720:CDS | 25.0% |
| ! | TACTACAAGATGACTAAATT+GGG | + | tig0022891:36480-36499 | None:intergenic | 25.0% |
| ! | ATACTACAAGATGACTAAAT+TGG | + | tig0022891:36481-36500 | None:intergenic | 25.0% |
| !! | AATACATTGATGGTAAGTTT+CGG | + | tig0022891:36549-36568 | None:intergenic | 25.0% |
| ! | AAACTTCTCAAATACATTGA+TGG | + | tig0022891:36559-36578 | None:intergenic | 25.0% |
| !!! | AACTCTGTTTTGTTTACATA+CGG | + | tig0022891:37018-37037 | None:intergenic | 25.0% |
| !! | ATAACTCTTCTTTTTCTACT+AGG | + | tig0022891:37089-37108 | None:intergenic | 25.0% |
| ! | GAGTTTAATGATCTTGATAT+AGG | - | tig0022891:37123-37142 | Msa1402720:CDS | 25.0% |
| !!! | TTTTGATGACAATTTGTAAG+AGG | + | tig0022891:37279-37298 | None:intergenic | 25.0% |
| !! | ACTTTACCATATTTAACTTC+TGG | + | tig0022891:37442-37461 | None:intergenic | 25.0% |
| ! | AAATATGGTAAAGTATGGAT+TGG | - | tig0022891:37448-37467 | Msa1402720:five_prime_UTR | 25.0% |
| ! | TCATTATATAACATTAAGGC+TGG | + | tig0022891:37528-37547 | None:intergenic | 25.0% |
| ! | AAAAGGAACTATTCTCAAAT+GGG | + | tig0022891:37620-37639 | None:intergenic | 25.0% |
| ! | TAAAAGGAACTATTCTCAAA+TGG | + | tig0022891:37621-37640 | None:intergenic | 25.0% |
| TGTAATCACACTCATTCATA+TGG | - | tig0022891:31973-31992 | Msa1402720:three_prime_UTR | 30.0% | |
| ! | TATTCTGCGATTTTCTTCAA+GGG | + | tig0022891:32094-32113 | None:intergenic | 30.0% |
| GTTAAGCAGAATATGAGTTT+GGG | - | tig0022891:32149-32168 | Msa1402720:three_prime_UTR | 30.0% | |
| CATCATTCATTCTATAGCAT+TGG | + | tig0022891:32461-32480 | None:intergenic | 30.0% | |
| TTTGTGTTCCAACTCAAAAA+AGG | - | tig0022891:32536-32555 | Msa1402720:intron | 30.0% | |
| GACAACACTTATGATAAGAA+AGG | + | tig0022891:32652-32671 | None:intergenic | 30.0% | |
| ATCATAAGTGTCAATGTTAC+AGG | - | tig0022891:32709-32728 | Msa1402720:intron | 30.0% | |
| ! | GTGTAACAGATTTTCTCTTA+TGG | + | tig0022891:32908-32927 | None:intergenic | 30.0% |
| TTCTAACTTAAATAGCAGCA+TGG | + | tig0022891:33028-33047 | None:intergenic | 30.0% | |
| ! | TAGAAAGCTTTTTACAACCA+TGG | - | tig0022891:33167-33186 | Msa1402720:intron | 30.0% |
| AAGTTCATATCAATCATCCA+TGG | + | tig0022891:33187-33206 | None:intergenic | 30.0% | |
| TTGTACACTTAATACTGCAA+TGG | - | tig0022891:33444-33463 | Msa1402720:intron | 30.0% | |
| !!! | GATTGCAGAATTTTTTTCCA+AGG | - | tig0022891:33487-33506 | Msa1402720:intron | 30.0% |
| !! | TGATTGATAATGGAAACAAC+AGG | + | tig0022891:33680-33699 | None:intergenic | 30.0% |
| TTGTTTCCATTATCAATCAC+AGG | - | tig0022891:33681-33700 | Msa1402720:intron | 30.0% | |
| TCAAAAACCAACACTGAATT+GGG | + | tig0022891:33802-33821 | None:intergenic | 30.0% | |
| TTCAAAAACCAACACTGAAT+TGG | + | tig0022891:33803-33822 | None:intergenic | 30.0% | |
| !!! | AATTCAGTGTTGGTTTTTGA+AGG | - | tig0022891:33802-33821 | Msa1402720:intron | 30.0% |
| AACGAACTGAATATTGCAAA+TGG | + | tig0022891:33914-33933 | None:intergenic | 30.0% | |
| TATTCAGTTCGTTTGTTTAC+AGG | - | tig0022891:33921-33940 | Msa1402720:intron | 30.0% | |
| ATTCAGTTCGTTTGTTTACA+GGG | - | tig0022891:33922-33941 | Msa1402720:intron | 30.0% | |
| ATGGAAACTCAGCAAAATTT+AGG | - | tig0022891:33971-33990 | Msa1402720:intron | 30.0% | |
| CAAAATTTAGGCATAGTGTT+AGG | - | tig0022891:33983-34002 | Msa1402720:intron | 30.0% | |
| CCTACAATTACGAAACAATA+TGG | + | tig0022891:34015-34034 | None:intergenic | 30.0% | |
| CCATATTGTTTCGTAATTGT+AGG | - | tig0022891:34012-34031 | Msa1402720:intron | 30.0% | |
| ! | ATTTTCCATTGTGAATTCCA+GGG | - | tig0022891:34035-34054 | Msa1402720:intron | 30.0% |
| TTTCAAATTCAAAGAAACCC+TGG | + | tig0022891:34055-34074 | None:intergenic | 30.0% | |
| TTCTACATATCTACAAGCAT+AGG | - | tig0022891:34098-34117 | Msa1402720:intron | 30.0% | |
| ! | AGTTTTCCACAAATTTGTAG+AGG | + | tig0022891:34275-34294 | None:intergenic | 30.0% |
| TAGCATTTGTATGCCAATTT+CGG | - | tig0022891:34303-34322 | Msa1402720:intron | 30.0% | |
| AGCAAGTATTAAACTTGATG+TGG | + | tig0022891:34472-34491 | None:intergenic | 30.0% | |
| ATAAGTTATATAGAGACAGC+TGG | - | tig0022891:34518-34537 | Msa1402720:intron | 30.0% | |
| TGCAAAAATGAAACATGTGA+TGG | - | tig0022891:34777-34796 | Msa1402720:intron | 30.0% | |
| ! | GGAACATCATAATCTTTTAC+TGG | - | tig0022891:34833-34852 | Msa1402720:intron | 30.0% |
| GTTCTAGTCAGAAATGTTAA+AGG | + | tig0022891:35106-35125 | None:intergenic | 30.0% | |
| TTAACATTTCTGACTAGAAC+TGG | - | tig0022891:35106-35125 | Msa1402720:CDS | 30.0% | |
| ATGCAAAAGGAAAATTGTCA+AGG | + | tig0022891:35150-35169 | None:intergenic | 30.0% | |
| ! | TAGTTAAGGATTTGACTTCA+TGG | + | tig0022891:35248-35267 | None:intergenic | 30.0% |
| TTGCACTATACAAATCTCAA+AGG | + | tig0022891:35498-35517 | None:intergenic | 30.0% | |
| ATATCAAATGCGCTACTTAA+CGG | + | tig0022891:35572-35591 | None:intergenic | 30.0% | |
| ATGTGTAATGATGAAAACTG+AGG | + | tig0022891:35668-35687 | None:intergenic | 30.0% | |
| CATACATATATAGAAAAGGG+TGG | + | tig0022891:35784-35803 | None:intergenic | 30.0% | |
| GTTTCAAATCGTTACATCAA+AGG | - | tig0022891:35884-35903 | Msa1402720:intron | 30.0% | |
| CATACTTTGATAGATTGGTA+TGG | + | tig0022891:36058-36077 | None:intergenic | 30.0% | |
| AATCCACAATGAAAAGGTTA+AGG | - | tig0022891:36292-36311 | Msa1402720:intron | 30.0% | |
| ! | TGATGTATTTGAAACGTTCT+GGG | + | tig0022891:36344-36363 | None:intergenic | 30.0% |
| !!! | CAGAATTATATTTTTAGGGG+GGG | - | tig0022891:36394-36413 | Msa1402720:CDS | 30.0% |
| ATACTTGTGGAAAACTTGAA+TGG | - | tig0022891:36668-36687 | Msa1402720:intron | 30.0% | |
| ! | CTACTAATAAAGCATCTATG+AGG | - | tig0022891:36744-36763 | Msa1402720:CDS | 30.0% |
| ACACACAAATGTAATATGCA+GGG | + | tig0022891:36787-36806 | None:intergenic | 30.0% | |
| TGATCTTGATATAGGTATCT+TGG | - | tig0022891:37131-37150 | Msa1402720:CDS | 30.0% | |
| AGCTATTAAATCATTGACCA+AGG | - | tig0022891:37166-37185 | Msa1402720:CDS | 30.0% | |
| GATATACTAAGGATTACTCA+TGG | - | tig0022891:37194-37213 | Msa1402720:intron | 30.0% | |
| ATCAATAGTTCCTTCACTAA+TGG | + | tig0022891:37230-37249 | None:intergenic | 30.0% | |
| TCATCAAAAGAAGAGTAGAA+TGG | - | tig0022891:37290-37309 | Msa1402720:intron | 30.0% | |
| AATTTAAACTTTCCAGTAGC+AGG | - | tig0022891:37571-37590 | Msa1402720:five_prime_UTR | 30.0% | |
| AAAGGAACTATTCTCAAATG+GGG | + | tig0022891:37619-37638 | None:intergenic | 30.0% | |
| CTTGCAGCTAAAATGTAAAA+CGG | + | tig0022891:37645-37664 | None:intergenic | 30.0% | |
| CTACTACTATTGCTACTATC+TGG | + | tig0022891:32037-32056 | None:intergenic | 35.0% | |
| GTTCTTCAATTCATAACGTC+AGG | + | tig0022891:32066-32085 | None:intergenic | 35.0% | |
| CGTTATGAATTGAAGAACAG+AGG | - | tig0022891:32068-32087 | Msa1402720:three_prime_UTR | 35.0% | |
| ! | GTATTCTGCGATTTTCTTCA+AGG | + | tig0022891:32095-32114 | None:intergenic | 35.0% |
| GAAAATTTATATGTTGGGGG+CGG | - | tig0022891:32116-32135 | Msa1402720:three_prime_UTR | 35.0% | |
| ACTCATATTCTGCTTAACCT+CGG | + | tig0022891:32147-32166 | None:intergenic | 35.0% | |
| GGTTAAGCAGAATATGAGTT+TGG | - | tig0022891:32148-32167 | Msa1402720:three_prime_UTR | 35.0% | |
| ATAAAGGAAGGGAAAGAAAG+TGG | - | tig0022891:32229-32248 | Msa1402720:three_prime_UTR | 35.0% | |
| TCTTCACTTCACTCGTTTAT+CGG | + | tig0022891:32260-32279 | None:intergenic | 35.0% | |
| ATAAACGAGTGAAGTGAAGA+CGG | - | tig0022891:32260-32279 | Msa1402720:three_prime_UTR | 35.0% | |
| ! | TGAGTTGGAACACAAACATA+GGG | + | tig0022891:32532-32551 | None:intergenic | 35.0% |
| !! | TTGAGTTGGAACACAAACAT+AGG | + | tig0022891:32533-32552 | None:intergenic | 35.0% |
| ! | TGTCAAGTTGTTTGGTATTG+CGG | - | tig0022891:32604-32623 | Msa1402720:intron | 35.0% |
| AAAGGATACAAAACCTGACA+TGG | + | tig0022891:32634-32653 | None:intergenic | 35.0% | |
| ! | GTAACAATGATAGAAGCACA+AGG | - | tig0022891:32736-32755 | Msa1402720:intron | 35.0% |
| ATGATATTCAGAAATCGGAG+TGG | - | tig0022891:32838-32857 | Msa1402720:intron | 35.0% | |
| AATCTGTTACACCATCCATA+CGG | - | tig0022891:32916-32935 | Msa1402720:intron | 35.0% | |
| TGCTCAAACTTTATCTTCGA+AGG | - | tig0022891:32943-32962 | Msa1402720:intron | 35.0% | |
| AAGGAAATTGCAAGATGACA+AGG | - | tig0022891:32962-32981 | Msa1402720:intron | 35.0% | |
| TATGGACAACTACAAGTTAG+TGG | - | tig0022891:33266-33285 | Msa1402720:intron | 35.0% | |
| CACCACATACATGTTGAAAA+CGG | + | tig0022891:33338-33357 | None:intergenic | 35.0% | |
| ! | AGATTGGAAGCATAAAACCT+TGG | + | tig0022891:33507-33526 | None:intergenic | 35.0% |
| TCTTAACTCACTGTCACAAA+TGG | + | tig0022891:33636-33655 | None:intergenic | 35.0% | |
| TGGTTACCTGTGATTGATAA+TGG | + | tig0022891:33690-33709 | None:intergenic | 35.0% | |
| !!! | AGTGTTGGTTTTTGAAGGAA+GGG | - | tig0022891:33807-33826 | Msa1402720:intron | 35.0% |
| ! | GATTTTCCATTGTGAATTCC+AGG | - | tig0022891:34034-34053 | Msa1402720:intron | 35.0% |
| AAGATATCTCCACTTTGAAC+TGG | - | tig0022891:34173-34192 | Msa1402720:intron | 35.0% | |
| AGATATCTCCACTTTGAACT+GGG | - | tig0022891:34174-34193 | Msa1402720:intron | 35.0% | |
| TTCCACTTATATCCTCAAAG+AGG | + | tig0022891:34226-34245 | None:intergenic | 35.0% | |
| ATTCTGCCTCTACAAATTTG+TGG | - | tig0022891:34266-34285 | Msa1402720:intron | 35.0% | |
| TGACAACTATCATCACCTAT+TGG | + | tig0022891:34391-34410 | None:intergenic | 35.0% | |
| !! | AAGTACCACTTTAGAACAGA+GGG | + | tig0022891:34603-34622 | None:intergenic | 35.0% |
| !! | TAAGTACCACTTTAGAACAG+AGG | + | tig0022891:34604-34623 | None:intergenic | 35.0% |
| CGAGAAAATGCAATTCTAGA+AGG | - | tig0022891:34747-34766 | Msa1402720:intron | 35.0% | |
| ! | TTTAGGTTATACCAGTTGTG+CGG | + | tig0022891:34812-34831 | None:intergenic | 35.0% |
| CACAACTGGTATAACCTAAA+AGG | - | tig0022891:34812-34831 | Msa1402720:intron | 35.0% | |
| !! | CTATGAGTTTTGTAGTCTGA+TGG | - | tig0022891:34856-34875 | Msa1402720:intron | 35.0% |
| !! | AAAAGAGTGTCAGTAACACT+TGG | + | tig0022891:34940-34959 | None:intergenic | 35.0% |
| CATTTCAATGCCAAGAATGT+GGG | - | tig0022891:34988-35007 | Msa1402720:intron | 35.0% | |
| TTTCCTTTGAACATGGATCA+AGG | + | tig0022891:35207-35226 | None:intergenic | 35.0% | |
| GCATCAAATTGATCGAGAAA+GGG | + | tig0022891:35339-35358 | None:intergenic | 35.0% | |
| TGCATCAAATTGATCGAGAA+AGG | + | tig0022891:35340-35359 | None:intergenic | 35.0% | |
| ATAGTAGATAGAGAACTGCA+AGG | + | tig0022891:35395-35414 | None:intergenic | 35.0% | |
| TAGGTAAAACATGCATGCAA+AGG | + | tig0022891:35467-35486 | None:intergenic | 35.0% | |
| AATCTCAAAGGAGTTGTACT+AGG | + | tig0022891:35486-35505 | None:intergenic | 35.0% | |
| CTACTTAACGGCAAAAGATT+TGG | + | tig0022891:35560-35579 | None:intergenic | 35.0% | |
| GAAAACTGAGGAAATATGAC+CGG | + | tig0022891:35656-35675 | None:intergenic | 35.0% | |
| GACTGCAAAGGTAAAATATC+AGG | + | tig0022891:35985-36004 | None:intergenic | 35.0% | |
| AGCTTCATTAATGACTGCAA+AGG | + | tig0022891:35997-36016 | None:intergenic | 35.0% | |
| TTTGCAGTCATTAATGAAGC+TGG | - | tig0022891:35996-36015 | Msa1402720:CDS | 35.0% | |
| CATTAATGAAGCTGGAGTAT+TGG | - | tig0022891:36004-36023 | Msa1402720:CDS | 35.0% | |
| GATGGCATACTTTGATAGAT+TGG | + | tig0022891:36063-36082 | None:intergenic | 35.0% | |
| TTGAGTATAGAAGTTTGCGA+TGG | + | tig0022891:36081-36100 | None:intergenic | 35.0% | |
| !!! | TTGCTAGTTTTGCTTTTTCC+TGG | - | tig0022891:36197-36216 | Msa1402720:CDS | 35.0% |
| !! | TTCATTTTTCTAATGCGACC+AGG | + | tig0022891:36218-36237 | None:intergenic | 35.0% |
| !! | AATCATGTAAGGTATTGTGG+AGG | - | tig0022891:36257-36276 | Msa1402720:CDS | 35.0% |
| ! | CAACCTTAACCTTTTCATTG+TGG | + | tig0022891:36298-36317 | None:intergenic | 35.0% |
| AAAGGTTAAGGTTGCAAGTT+AGG | - | tig0022891:36304-36323 | Msa1402720:intron | 35.0% | |
| ! | CTGATGTATTTGAAACGTTC+TGG | + | tig0022891:36345-36364 | None:intergenic | 35.0% |
| CACAATGAATAGCTATTCAG+AGG | + | tig0022891:36517-36536 | None:intergenic | 35.0% | |
| ! | TGGATGTTTTACTTCATTGC+AGG | - | tig0022891:36604-36623 | Msa1402720:intron | 35.0% |
| AATATTGCAAGCCAAGCAAA+GGG | + | tig0022891:36648-36667 | None:intergenic | 35.0% | |
| TAATATTGCAAGCCAAGCAA+AGG | + | tig0022891:36649-36668 | None:intergenic | 35.0% | |
| GGCTTGCAATATTATACTTG+TGG | - | tig0022891:36655-36674 | Msa1402720:intron | 35.0% | |
| CACACAAATGTAATATGCAG+GGG | + | tig0022891:36786-36805 | None:intergenic | 35.0% | |
| CACACACAAATGTAATATGC+AGG | + | tig0022891:36788-36807 | None:intergenic | 35.0% | |
| ACATGCATCACATTCAAACA+AGG | - | tig0022891:36830-36849 | Msa1402720:intron | 35.0% | |
| ! | CTTTTTCTACTAGGTGACAT+TGG | + | tig0022891:37080-37099 | None:intergenic | 35.0% |
| TACAAAGACTCCATTAGTGA+AGG | - | tig0022891:37217-37236 | Msa1402720:intron | 35.0% | |
| !! | GAAGGAACTATTGATGATGT+TGG | - | tig0022891:37235-37254 | Msa1402720:intron | 35.0% |
| TCAAAAGAAGAGTAGAATGG+CGG | - | tig0022891:37293-37312 | Msa1402720:intron | 35.0% | |
| ATGATTGCACTTGTTTACTC+TGG | - | tig0022891:37397-37416 | Msa1402720:exon | 35.0% | |
| ! | ACTCTGGAAATTTGCTTAGA+TGG | - | tig0022891:37413-37432 | Msa1402720:five_prime_UTR | 35.0% |
| TGGTCTCCAGAAGTTAAATA+TGG | - | tig0022891:37433-37452 | Msa1402720:five_prime_UTR | 35.0% | |
| CTCATATTCTGCTTAACCTC+GGG | + | tig0022891:32146-32165 | None:intergenic | 40.0% | |
| !! | ATTAACGGGTTATATCGGGT+CGG | - | tig0022891:32181-32200 | Msa1402720:three_prime_UTR | 40.0% |
| AGTTTCCACCATCTCAGAAA+AGG | - | tig0022891:32326-32345 | Msa1402720:three_prime_UTR | 40.0% | |
| GTTTCCACCATCTCAGAAAA+GGG | - | tig0022891:32327-32346 | Msa1402720:three_prime_UTR | 40.0% | |
| ACTACTAAAGATTTCCACCC+AGG | - | tig0022891:32363-32382 | Msa1402720:three_prime_UTR | 40.0% | |
| !! | TTACTTTGGTGTTGCATTGC+AGG | - | tig0022891:32484-32503 | Msa1402720:CDS | 40.0% |
| !! | TACTTTGGTGTTGCATTGCA+GGG | - | tig0022891:32485-32504 | Msa1402720:CDS | 40.0% |
| !!! | CCATCACACCTTTTTTGAGT+TGG | + | tig0022891:32547-32566 | None:intergenic | 40.0% |
| ! | CCAACTCAAAAAAGGTGTGA+TGG | - | tig0022891:32544-32563 | Msa1402720:intron | 40.0% |
| TTGAATGTCAAGCACTCTCA+AGG | - | tig0022891:32874-32893 | Msa1402720:intron | 40.0% | |
| AAGTTTGAGCATCAACCGTA+TGG | + | tig0022891:32934-32953 | None:intergenic | 40.0% | |
| ! | CTCCGTTTTCAACATGTATG+TGG | - | tig0022891:33333-33352 | Msa1402720:intron | 40.0% |
| TGATGTCAGACATGTCTTGA+TGG | + | tig0022891:33385-33404 | None:intergenic | 40.0% | |
| AGACATGTCTGACATCAAAG+AGG | - | tig0022891:33388-33407 | Msa1402720:intron | 40.0% | |
| AAACCAACACTGAATTGGGT+AGG | + | tig0022891:33798-33817 | None:intergenic | 40.0% | |
| !!! | CAGTGTTGGTTTTTGAAGGA+AGG | - | tig0022891:33806-33825 | Msa1402720:intron | 40.0% |
| !! | TTTTGAAGGAAGGGTAGCAT+CGG | - | tig0022891:33816-33835 | Msa1402720:intron | 40.0% |
| ATAGATACCTCAGTCCCTTT+AGG | + | tig0022891:33862-33881 | None:intergenic | 40.0% | |
| AGAAACCCTGGAATTCACAA+TGG | + | tig0022891:34043-34062 | None:intergenic | 40.0% | |
| ! | GACCTCTTTGAGGATATAAG+TGG | - | tig0022891:34221-34240 | Msa1402720:intron | 40.0% |
| ! | AAGTTGCAACTGCCTAGTTT+TGG | + | tig0022891:34329-34348 | None:intergenic | 40.0% |
| GGGTACATCTCATATCCAAT+AGG | - | tig0022891:34373-34392 | Msa1402720:CDS | 40.0% | |
| !! | AGTACCACTTTAGAACAGAG+GGG | + | tig0022891:34602-34621 | None:intergenic | 40.0% |
| GCATTTCAATGCCAAGAATG+TGG | - | tig0022891:34987-35006 | Msa1402720:intron | 40.0% | |
| CTCTTACTAACCCACATTCT+TGG | + | tig0022891:35001-35020 | None:intergenic | 40.0% | |
| !! | ATGTGGGTTAGTAAGAGACA+AGG | - | tig0022891:35004-35023 | Msa1402720:intron | 40.0% |
| ATGGATCAAGGCTCCATTAA+AGG | + | tig0022891:35195-35214 | None:intergenic | 40.0% | |
| CAATTTGATGCAAACACGAG+AGG | - | tig0022891:35348-35367 | Msa1402720:intron | 40.0% | |
| TACCAACGGAATCAATGCTA+CGG | + | tig0022891:36126-36145 | None:intergenic | 40.0% | |
| GCAACAACTGAAACTACCAA+CGG | + | tig0022891:36140-36159 | None:intergenic | 40.0% | |
| ACAAACAGATGGAGGAATGA+TGG | - | tig0022891:36421-36440 | Msa1402720:CDS | 40.0% | |
| CAAACAGATGGAGGAATGAT+GGG | - | tig0022891:36422-36441 | Msa1402720:CDS | 40.0% | |
| CCATCACAACTAGCTAAGAA+AGG | + | tig0022891:36902-36921 | None:intergenic | 40.0% | |
| CCTTTCTTAGCTAGTTGTGA+TGG | - | tig0022891:36899-36918 | Msa1402720:intron | 40.0% | |
| ! | ACTAGGTGACATTGGTTACA+TGG | + | tig0022891:37072-37091 | None:intergenic | 40.0% |
| TATAGGTATCTTGGAGACAC+AGG | - | tig0022891:37140-37159 | Msa1402720:CDS | 40.0% | |
| ATAGGTATCTTGGAGACACA+GGG | - | tig0022891:37141-37160 | Msa1402720:CDS | 40.0% | |
| TAAATCATTGACCAAGGCAG+TGG | - | tig0022891:37172-37191 | Msa1402720:intron | 40.0% | |
| !! | GGAACTATTGATGATGTTGG+AGG | - | tig0022891:37238-37257 | Msa1402720:intron | 40.0% |
| ATTTGTAAGAGGCTTCTGCA+CGG | + | tig0022891:37268-37287 | None:intergenic | 40.0% | |
| CAAAAGAAGAGTAGAATGGC+GGG | - | tig0022891:37294-37313 | Msa1402720:intron | 40.0% | |
| !!! | CCTTTTGTTTTTCCTGCTAC+TGG | + | tig0022891:37586-37605 | None:intergenic | 40.0% |
| CCAGTAGCAGGAAAAACAAA+AGG | - | tig0022891:37583-37602 | Msa1402720:five_prime_UTR | 40.0% | |
| GAGTGAAGTGAAGACGGAAA+TGG | - | tig0022891:32266-32285 | Msa1402720:three_prime_UTR | 45.0% | |
| TGAAGTGAAGACGGAAATGG+AGG | - | tig0022891:32269-32288 | Msa1402720:three_prime_UTR | 45.0% | |
| !! | ACTTTGGTGTTGCATTGCAG+GGG | - | tig0022891:32486-32505 | Msa1402720:CDS | 45.0% |
| GAACACAAACATAGGGCTCT+TGG | + | tig0022891:32525-32544 | None:intergenic | 45.0% | |
| ! | GACAACGTGAGCATTTGCTA+AGG | + | tig0022891:32588-32607 | None:intergenic | 45.0% |
| ! | GCTCACGTTGTCAAGTTGTT+TGG | - | tig0022891:32596-32615 | Msa1402720:intron | 45.0% |
| ! | GATAGAAGCACAAGGAGTGT+TGG | - | tig0022891:32744-32763 | Msa1402720:intron | 45.0% |
| TTGAGCATCAACCGTATGGA+TGG | + | tig0022891:32930-32949 | None:intergenic | 45.0% | |
| ! | GATCATTCCAAGCACTGCTA+TGG | - | tig0022891:33248-33267 | Msa1402720:intron | 45.0% |
| TAGTTGTCCATAGCAGTGCT+TGG | + | tig0022891:33258-33277 | None:intergenic | 45.0% | |
| GGACAACTACAAGTTAGTGG+AGG | - | tig0022891:33269-33288 | Msa1402720:intron | 45.0% | |
| !! | CAAGTTAGTGGAGGCATTAG+TGG | - | tig0022891:33278-33297 | Msa1402720:intron | 45.0% |
| TGACAGTGAGTTAAGACCTC+TGG | - | tig0022891:33640-33659 | Msa1402720:CDS | 45.0% | |
| GACAGTGAGTTAAGACCTCT+GGG | - | tig0022891:33641-33660 | Msa1402720:CDS | 45.0% | |
| GAATTGGGTAGGCAGCTATA+TGG | + | tig0022891:33787-33806 | None:intergenic | 45.0% | |
| CTGTGCAACATGTGCCTAAA+GGG | - | tig0022891:33845-33864 | Msa1402720:intron | 45.0% | |
| AAAGAGGTCCCAGTTCAAAG+TGG | + | tig0022891:34185-34204 | None:intergenic | 45.0% | |
| ACTTTGAACTGGGACCTCTT+TGG | - | tig0022891:34184-34203 | Msa1402720:intron | 45.0% | |
| CTTTGAACTGGGACCTCTTT+GGG | - | tig0022891:34185-34204 | Msa1402720:intron | 45.0% | |
| TTTGAACTGGGACCTCTTTG+GGG | - | tig0022891:34186-34205 | Msa1402720:intron | 45.0% | |
| ATTATAGCCGTTCCCCAAAG+AGG | + | tig0022891:34201-34220 | None:intergenic | 45.0% | |
| CGGCTATAATGACCTCTTTG+AGG | - | tig0022891:34211-34230 | Msa1402720:intron | 45.0% | |
| AGTGGAAGTCGAACTACTAG+AGG | - | tig0022891:34239-34258 | Msa1402720:intron | 45.0% | |
| TGCCAATTTCGGCCAAAACT+AGG | - | tig0022891:34314-34333 | Msa1402720:CDS | 45.0% | |
| !!! | TGCCTAGTTTTGGCCGAAAT+TGG | + | tig0022891:34319-34338 | None:intergenic | 45.0% |
| ! | AAGCACTGTGACTCGACAAA+AGG | - | tig0022891:34541-34560 | Msa1402720:intron | 45.0% |
| GGGGACAAACACAAGTGAAT+AGG | + | tig0022891:34583-34602 | None:intergenic | 45.0% | |
| !! | TTGTCCCCTCTGTTCTAAAG+TGG | - | tig0022891:34595-34614 | Msa1402720:CDS | 45.0% |
| ! | AGAGTGTCAGTAACACTTGG+TGG | + | tig0022891:34937-34956 | None:intergenic | 45.0% |
| GCTTCTAAGCCTTCTTCTAG+TGG | - | tig0022891:35074-35093 | Msa1402720:intron | 45.0% | |
| AGGATACTGCCACTAGAAGA+AGG | + | tig0022891:35086-35105 | None:intergenic | 45.0% | |
| GAGCCTTGATCCATGTTCAA+AGG | - | tig0022891:35201-35220 | Msa1402720:intron | 45.0% | |
| ! | AACACGAGAGGCGATTTTGA+AGG | - | tig0022891:35360-35379 | Msa1402720:intron | 45.0% |
| ACTTTGGATGATCCTGCAAC+CGG | - | tig0022891:35634-35653 | Msa1402720:intron | 45.0% | |
| TATCCCCAGTACAGTGAGTT+TGG | - | tig0022891:35751-35770 | Msa1402720:intron | 45.0% | |
| ATGCCAAACTCACTGTACTG+GGG | + | tig0022891:35757-35776 | None:intergenic | 45.0% | |
| GATGCCAAACTCACTGTACT+GGG | + | tig0022891:35758-35777 | None:intergenic | 45.0% | |
| AGATGCCAAACTCACTGTAC+TGG | + | tig0022891:35759-35778 | None:intergenic | 45.0% | |
| ! | ATCGTTACATCAAAGGCACG+TGG | - | tig0022891:35891-35910 | Msa1402720:intron | 45.0% |
| !! | TTCCGTAGCATTGATTCCGT+TGG | - | tig0022891:36121-36140 | Msa1402720:intron | 45.0% |
| !! | GAGGAATGATGGGCAATGAT+GGG | - | tig0022891:36432-36451 | Msa1402720:intron | 45.0% |
| ATGATGCTGACATGCAATGC+TGG | - | tig0022891:36584-36603 | Msa1402720:intron | 45.0% | |
| CCTTAGTATATCCACTGCCT+TGG | + | tig0022891:37186-37205 | None:intergenic | 45.0% | |
| CCAAGGCAGTGGATATACTA+AGG | - | tig0022891:37183-37202 | Msa1402720:intron | 45.0% | |
| TTTGTAAGAGGCTTCTGCAC+GGG | + | tig0022891:37267-37286 | None:intergenic | 45.0% | |
| ACCAGAAGCAGCTGTGATAT+CGG | + | tig0022891:37329-37348 | None:intergenic | 45.0% | |
| TTCTGGTACAAACAAGCCAC+TGG | - | tig0022891:37342-37361 | Msa1402720:CDS | 45.0% | |
| ! | CATTAAGGCTGGCTGATGAA+GGG | + | tig0022891:37517-37536 | None:intergenic | 45.0% |
| ! | ACATTAAGGCTGGCTGATGA+AGG | + | tig0022891:37518-37537 | None:intergenic | 45.0% |
| !!! | TTTATTTATTTTATATTACT+CGG | + | tig0022891:32214-32233 | None:intergenic | 5.0% |
| !!! | CTATTTTATATAATTTTTTA+AGG | - | tig0022891:34490-34509 | Msa1402720:intron | 5.0% |
| !! | GATAAAAAAAATAAAATAAA+TGG | - | tig0022891:34910-34929 | Msa1402720:CDS | 5.0% |
| !! | AGAGCGACCCTTTTCTGAGA+TGG | + | tig0022891:32337-32356 | None:intergenic | 50.0% |
| AGAGAGAGAGAGAGTGACCT+GGG | + | tig0022891:32383-32402 | None:intergenic | 50.0% | |
| GTATTGCGGAACACCATGTC+AGG | - | tig0022891:32618-32637 | Msa1402720:intron | 50.0% | |
| GTCTTGTGTCCGACACATGT+TGG | + | tig0022891:32680-32699 | None:intergenic | 50.0% | |
| TGACATCAAAGAGGAGCAGC+TGG | - | tig0022891:33397-33416 | Msa1402720:intron | 50.0% | |
| !! | GCTGGTGTTGTATGCACAGA+TGG | - | tig0022891:33415-33434 | Msa1402720:intron | 50.0% |
| GCGCATTACATGCAAACTGC+AGG | + | tig0022891:33610-33629 | None:intergenic | 50.0% | |
| ! | GAGTTAAGACCTCTGGGAAC+AGG | - | tig0022891:33647-33666 | Msa1402720:CDS | 50.0% |
| GGATACAATCCTGTTCCCAG+AGG | + | tig0022891:33659-33678 | None:intergenic | 50.0% | |
| CTGCCTACCCAATTCAGTGT+TGG | - | tig0022891:33792-33811 | Msa1402720:intron | 50.0% | |
| GCTGTGCAACATGTGCCTAA+AGG | - | tig0022891:33844-33863 | Msa1402720:intron | 50.0% | |
| ACATGTGCCTAAAGGGACTG+AGG | - | tig0022891:33852-33871 | Msa1402720:intron | 50.0% | |
| GAGGAAATATGACCGGTTGC+AGG | + | tig0022891:35649-35668 | None:intergenic | 50.0% | |
| GGGGAAGAACAAACAGATGG+AGG | - | tig0022891:36413-36432 | Msa1402720:CDS | 50.0% | |
| !! | GGAGGAATGATGGGCAATGA+TGG | - | tig0022891:36431-36450 | Msa1402720:intron | 50.0% |
| ACCGATATCACAGCTGCTTC+TGG | - | tig0022891:37325-37344 | Msa1402720:CDS | 50.0% | |
| TACAAACAAGCCACTGGAGC+TGG | - | tig0022891:37348-37367 | Msa1402720:CDS | 50.0% | |
| ATTCTGTGATCCAGCTCCAG+TGG | + | tig0022891:37361-37380 | None:intergenic | 50.0% | |
| !!! | GCGACCCTTTTCTGAGATGG+TGG | + | tig0022891:32334-32353 | None:intergenic | 55.0% |
| GAGAGAGAGAGAGAGTGACC+TGG | + | tig0022891:32384-32403 | None:intergenic | 55.0% | |
| TGTCGGCGTCCAACATGTGT+CGG | - | tig0022891:32668-32687 | Msa1402720:intron | 55.0% | |
| ! | ACTGGGACCTCTTTGGGGAA+CGG | - | tig0022891:34191-34210 | Msa1402720:intron | 55.0% |
| GGTTTCTTGCTCCGCACAAC+TGG | - | tig0022891:34798-34817 | Msa1402720:intron | 55.0% | |
| GGGGGGGAAGAACAAACAGA+TGG | - | tig0022891:36410-36429 | Msa1402720:CDS | 55.0% | |
| CCAAGCAAAGGGTGAACAGC+TGG | + | tig0022891:36637-36656 | None:intergenic | 55.0% | |
| CCAGCTGTTCACCCTTTGCT+TGG | - | tig0022891:36634-36653 | Msa1402720:intron | 55.0% | |
| GAGAGAGAGAGTGACCTGGG+TGG | + | tig0022891:32380-32399 | None:intergenic | 60.0% | |
| TGTTGGGGGCGGATGACCCG+AGG | - | tig0022891:32127-32146 | Msa1402720:three_prime_UTR | 70.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| tig0022891 | gene | 31946 | 37745 | 31946 | ID=Msa1402720;Name=Msa1402720 |
| tig0022891 | mRNA | 31946 | 37745 | 31946 | ID=Msa1402720-mRNA-1;Parent=Msa1402720;Name=Msa1402720-mRNA-1;_AED=0.16;_eAED=0.16;_QI=339|0.92|0.92|1|0.76|0.92|14|438|467 |
| tig0022891 | exon | 31946 | 32546 | 31946 | ID=Msa1402720-mRNA-1:exon:19095;Parent=Msa1402720-mRNA-1 |
| tig0022891 | exon | 33002 | 33065 | 33002 | ID=Msa1402720-mRNA-1:exon:19094;Parent=Msa1402720-mRNA-1 |
| tig0022891 | exon | 33619 | 33688 | 33619 | ID=Msa1402720-mRNA-1:exon:19093;Parent=Msa1402720-mRNA-1 |
| tig0022891 | exon | 34310 | 34416 | 34310 | ID=Msa1402720-mRNA-1:exon:19092;Parent=Msa1402720-mRNA-1 |
| tig0022891 | exon | 34593 | 34712 | 34593 | ID=Msa1402720-mRNA-1:exon:19091;Parent=Msa1402720-mRNA-1 |
| tig0022891 | exon | 34872 | 34962 | 34872 | ID=Msa1402720-mRNA-1:exon:19090;Parent=Msa1402720-mRNA-1 |
| tig0022891 | exon | 35075 | 35179 | 35075 | ID=Msa1402720-mRNA-1:exon:19089;Parent=Msa1402720-mRNA-1 |
| tig0022891 | exon | 35818 | 35899 | 35818 | ID=Msa1402720-mRNA-1:exon:19088;Parent=Msa1402720-mRNA-1 |
| tig0022891 | exon | 35989 | 36077 | 35989 | ID=Msa1402720-mRNA-1:exon:19087;Parent=Msa1402720-mRNA-1 |
| tig0022891 | exon | 36183 | 36301 | 36183 | ID=Msa1402720-mRNA-1:exon:19086;Parent=Msa1402720-mRNA-1 |
| tig0022891 | exon | 36388 | 36442 | 36388 | ID=Msa1402720-mRNA-1:exon:19085;Parent=Msa1402720-mRNA-1 |
| tig0022891 | exon | 36708 | 36842 | 36708 | ID=Msa1402720-mRNA-1:exon:19084;Parent=Msa1402720-mRNA-1 |
| tig0022891 | exon | 37082 | 37185 | 37082 | ID=Msa1402720-mRNA-1:exon:19083;Parent=Msa1402720-mRNA-1 |
| tig0022891 | exon | 37307 | 37745 | 37307 | ID=Msa1402720-mRNA-1:exon:19082;Parent=Msa1402720-mRNA-1 |
| tig0022891 | five_prime_UTR | 37407 | 37745 | 37407 | ID=Msa1402720-mRNA-1:five_prime_utr;Parent=Msa1402720-mRNA-1 |
| tig0022891 | CDS | 37307 | 37406 | 37307 | ID=Msa1402720-mRNA-1:cds;Parent=Msa1402720-mRNA-1 |
| tig0022891 | CDS | 37082 | 37185 | 37082 | ID=Msa1402720-mRNA-1:cds;Parent=Msa1402720-mRNA-1 |
| tig0022891 | CDS | 36708 | 36842 | 36708 | ID=Msa1402720-mRNA-1:cds;Parent=Msa1402720-mRNA-1 |
| tig0022891 | CDS | 36388 | 36442 | 36388 | ID=Msa1402720-mRNA-1:cds;Parent=Msa1402720-mRNA-1 |
| tig0022891 | CDS | 36183 | 36301 | 36183 | ID=Msa1402720-mRNA-1:cds;Parent=Msa1402720-mRNA-1 |
| tig0022891 | CDS | 35989 | 36077 | 35989 | ID=Msa1402720-mRNA-1:cds;Parent=Msa1402720-mRNA-1 |
| tig0022891 | CDS | 35818 | 35899 | 35818 | ID=Msa1402720-mRNA-1:cds;Parent=Msa1402720-mRNA-1 |
| tig0022891 | CDS | 35075 | 35179 | 35075 | ID=Msa1402720-mRNA-1:cds;Parent=Msa1402720-mRNA-1 |
| tig0022891 | CDS | 34872 | 34962 | 34872 | ID=Msa1402720-mRNA-1:cds;Parent=Msa1402720-mRNA-1 |
| tig0022891 | CDS | 34593 | 34712 | 34593 | ID=Msa1402720-mRNA-1:cds;Parent=Msa1402720-mRNA-1 |
| tig0022891 | CDS | 34310 | 34416 | 34310 | ID=Msa1402720-mRNA-1:cds;Parent=Msa1402720-mRNA-1 |
| tig0022891 | CDS | 33619 | 33688 | 33619 | ID=Msa1402720-mRNA-1:cds;Parent=Msa1402720-mRNA-1 |
| tig0022891 | CDS | 33002 | 33065 | 33002 | ID=Msa1402720-mRNA-1:cds;Parent=Msa1402720-mRNA-1 |
| tig0022891 | CDS | 32384 | 32546 | 32384 | ID=Msa1402720-mRNA-1:cds;Parent=Msa1402720-mRNA-1 |
| tig0022891 | three_prime_UTR | 31946 | 32383 | 31946 | ID=Msa1402720-mRNA-1:three_prime_utr;Parent=Msa1402720-mRNA-1 |
| Gene Sequence |
| Protein sequence |
