Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1404560 | XP_003596974.1 | 96.833 | 221 | 7 | 0 | 3 | 223 | 4 | 224 | 2.77e-150 | 432 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1404560 | sp|Q9SLN8|DBR_TOBAC | 38.667 | 225 | 129 | 6 | 1 | 223 | 1 | 218 | 2.41e-43 | 151 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1404560 | G7ITY1 | 96.833 | 221 | 7 | 0 | 3 | 223 | 4 | 224 | 1.32e-150 | 432 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0047980 | Msa1404560 | 0.804527 | 2.069568e-49 | -8.615850e-47 |
| Msa1404560 | Msa1431040 | 0.829410 | 5.227851e-55 | -8.615850e-47 |
| Msa0650190 | Msa1404560 | 0.805489 | 1.302117e-49 | -8.615850e-47 |
| Msa0260830 | Msa1404560 | 0.836764 | 7.727461e-57 | -8.615850e-47 |
| Msa0281360 | Msa1404560 | 0.821548 | 3.809067e-53 | -8.615850e-47 |
| Msa0298700 | Msa1404560 | 0.818613 | 1.788876e-52 | -8.615850e-47 |
| Msa1199220 | Msa1404560 | 0.807279 | 5.463577e-50 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1404560 | MtrunA17_Chr2g0322551 | 96.833 | 221 | 7 | 0 | 3 | 223 | 4 | 224 | 2.55e-154 | 432 |
| Msa1404560 | MtrunA17_Chr2g0322531 | 83.408 | 223 | 37 | 0 | 1 | 223 | 1 | 223 | 9.18e-133 | 377 |
| Msa1404560 | MtrunA17_Chr2g0322541 | 81.250 | 224 | 41 | 1 | 1 | 223 | 1 | 224 | 9.06e-129 | 369 |
| Msa1404560 | MtrunA17_Chr7g0214831 | 40.291 | 206 | 121 | 2 | 18 | 223 | 18 | 221 | 9.11e-45 | 152 |
| Msa1404560 | MtrunA17_Chr8g0337451 | 40.969 | 227 | 122 | 8 | 1 | 223 | 1 | 219 | 5.73e-43 | 147 |
| Msa1404560 | MtrunA17_Chr8g0337471 | 37.333 | 225 | 133 | 5 | 1 | 223 | 1 | 219 | 6.09e-40 | 140 |
| Msa1404560 | MtrunA17_Chr8g0335881 | 38.938 | 226 | 127 | 8 | 1 | 223 | 1 | 218 | 6.75e-39 | 134 |
| Msa1404560 | MtrunA17_Chr8g0337491 | 34.498 | 229 | 136 | 4 | 6 | 223 | 5 | 230 | 8.08e-38 | 135 |
| Msa1404560 | MtrunA17_Chr8g0337361 | 38.938 | 226 | 127 | 8 | 1 | 223 | 60 | 277 | 2.70e-37 | 134 |
| Msa1404560 | MtrunA17_Chr8g0337481 | 47.917 | 144 | 73 | 2 | 80 | 223 | 19 | 160 | 4.73e-37 | 130 |
| Msa1404560 | MtrunA17_Chr8g0337371 | 38.938 | 226 | 126 | 9 | 1 | 223 | 496 | 712 | 3.80e-35 | 131 |
| Msa1404560 | MtrunA17_Chr8g0337371 | 38.158 | 228 | 125 | 10 | 1 | 223 | 49 | 265 | 1.61e-34 | 130 |
| Msa1404560 | MtrunA17_Chr2g0307121 | 33.032 | 221 | 141 | 4 | 7 | 223 | 4 | 221 | 1.00e-34 | 126 |
| Msa1404560 | MtrunA17_Chr4g0043061 | 40.217 | 184 | 103 | 4 | 43 | 223 | 46 | 225 | 3.93e-32 | 119 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1404560 | AT1G65560.1 | 40.435 | 230 | 124 | 7 | 1 | 223 | 1 | 224 | 3.23e-42 | 146 |
| Msa1404560 | AT5G16970.1 | 38.739 | 222 | 125 | 7 | 7 | 223 | 5 | 220 | 3.06e-39 | 138 |
| Msa1404560 | AT5G17000.2 | 41.294 | 201 | 110 | 5 | 26 | 223 | 25 | 220 | 1.17e-38 | 134 |
| Msa1404560 | AT5G16990.1 | 38.756 | 209 | 119 | 6 | 19 | 223 | 15 | 218 | 1.17e-37 | 134 |
| Msa1404560 | AT5G17000.1 | 41.294 | 201 | 110 | 5 | 26 | 223 | 25 | 220 | 2.11e-37 | 133 |
| Msa1404560 | AT3G03080.1 | 39.367 | 221 | 124 | 6 | 7 | 223 | 11 | 225 | 3.19e-37 | 133 |
| Msa1404560 | AT1G26320.1 | 37.838 | 222 | 127 | 6 | 7 | 223 | 11 | 226 | 5.07e-37 | 132 |
| Msa1404560 | AT5G37940.1 | 39.437 | 213 | 114 | 7 | 19 | 223 | 23 | 228 | 6.18e-37 | 132 |
| Msa1404560 | AT5G38000.1 | 39.303 | 201 | 110 | 6 | 31 | 223 | 32 | 228 | 2.26e-35 | 128 |
| Msa1404560 | AT5G38000.3 | 39.303 | 201 | 110 | 6 | 31 | 223 | 32 | 228 | 2.32e-35 | 128 |
| Msa1404560 | AT5G37980.1 | 38.967 | 213 | 115 | 7 | 19 | 223 | 23 | 228 | 4.62e-35 | 127 |
| Msa1404560 | AT5G16960.2 | 41.667 | 180 | 100 | 4 | 47 | 223 | 44 | 221 | 1.43e-34 | 126 |
| Msa1404560 | AT5G16960.1 | 41.667 | 180 | 100 | 4 | 47 | 223 | 44 | 221 | 1.43e-34 | 126 |
| Msa1404560 | AT1G65560.2 | 47.260 | 146 | 74 | 2 | 80 | 223 | 4 | 148 | 7.27e-34 | 122 |
| Msa1404560 | AT1G26320.2 | 36.937 | 222 | 124 | 7 | 7 | 223 | 11 | 221 | 1.97e-33 | 123 |
| Msa1404560 | AT3G59845.1 | 36.199 | 221 | 135 | 5 | 6 | 223 | 6 | 223 | 1.91e-31 | 118 |
| Msa1404560 | AT3G59845.2 | 48.673 | 113 | 57 | 1 | 111 | 223 | 10 | 121 | 1.06e-27 | 105 |
| Msa1404560 | AT5G16980.1 | 52.128 | 94 | 45 | 0 | 130 | 223 | 21 | 114 | 1.06e-26 | 103 |
| Msa1404560 | AT5G16980.3 | 52.128 | 94 | 45 | 0 | 130 | 223 | 21 | 114 | 1.06e-26 | 103 |
| Msa1404560 | AT5G16980.2 | 52.128 | 94 | 45 | 0 | 130 | 223 | 87 | 180 | 2.16e-26 | 103 |
| Msa1404560 | AT5G38000.2 | 35.821 | 201 | 98 | 7 | 31 | 223 | 32 | 209 | 1.36e-24 | 99.8 |
Find 67 sgRNAs with CRISPR-Local
Find 414 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| TCTGATTATCTTGGTTCTTT+AGG | 0.147688 | tig0023071:+87190 | Msa1404560:CDS |
| TTACAATACACTTTCTAATT+TGG | 0.162459 | tig0023071:+86571 | Msa1404560:five_prime_UTR |
| GTAATACACCTACTAATTAT+TGG | 0.198021 | tig0023071:+86624 | Msa1404560:five_prime_UTR |
| AAGCTCATTAAAGAGGAATT+TGG | 0.242182 | tig0023071:+94716 | Msa1404560:CDS |
| ATTTCTTTGTCTGATTATCT+TGG | 0.289511 | tig0023071:+87181 | Msa1404560:CDS |
| CACTTAATTGCAGGAGTTCC+GGG | 0.295934 | tig0023071:+87421 | Msa1404560:intron |
| ACACTTAATTGCAGGAGTTC+CGG | 0.310462 | tig0023071:+87420 | Msa1404560:intron |
| TATTCAGCAACTGGAGCATT+TGG | 0.312141 | tig0023071:-87106 | Msa1404560:intergenic |
| AATACATTTGATCCTGGCTT+TGG | 0.334066 | tig0023071:-87481 | Msa1404560:intergenic |
| TTACAGTATTTGCAGTTGTA+AGG | 0.367660 | tig0023071:+87032 | Msa1404560:CDS |
| AGTTCCGGGGTTTGCAGCAT+GGG | 0.383168 | tig0023071:+87435 | Msa1404560:CDS |
| TATCTATTAATCCAACTATC+AGG | 0.389484 | tig0023071:+86668 | Msa1404560:five_prime_UTR |
| GTTGTCCGGGATTGAATCAT+TGG | 0.389956 | tig0023071:-86818 | Msa1404560:intergenic |
| TCCGTTGACCCTTATCTTCG+TGG | 0.403886 | tig0023071:+86868 | Msa1404560:CDS |
| CGATGGGTTCAACTACAATA+AGG | 0.420379 | tig0023071:+94745 | Msa1404560:CDS |
| ACAATACTATATTCAGCAAC+TGG | 0.430511 | tig0023071:-87115 | Msa1404560:intergenic |
| TCCGGGGTTTGCAGCATGGG+TGG | 0.432098 | tig0023071:+87438 | Msa1404560:CDS |
| TGTAGGGTCATCGGCAGTAC+TGG | 0.437208 | tig0023071:+87565 | Msa1404560:CDS |
| GAGTTCCGGGGTTTGCAGCA+TGG | 0.454566 | tig0023071:+87434 | Msa1404560:CDS |
| CAGTACTGGCTCTGATGATA+AGG | 0.456203 | tig0023071:+87579 | Msa1404560:CDS |
| TCAACTGCCAGATGGTTGTC+CGG | 0.459003 | tig0023071:-86832 | Msa1404560:intergenic |
| GTGATTCTTCCACGAAGATA+AGG | 0.461973 | tig0023071:-86877 | Msa1404560:intergenic |
| ACTTTCTGGCACCTGATAGT+TGG | 0.464038 | tig0023071:-86679 | Msa1404560:intergenic |
| TTCAATCCCGGACAACCATC+TGG | 0.469178 | tig0023071:+86825 | Msa1404560:CDS |
| TGCAGCATGGGTGGGAATAG+AGG | 0.473520 | tig0023071:+87447 | Msa1404560:CDS |
| TTTCTAGTTATTTGAGAAGA+GGG | 0.479888 | tig0023071:-87139 | Msa1404560:intergenic |
| GTATTCATATCTGCTGCATC+TGG | 0.483168 | tig0023071:+87499 | Msa1404560:CDS |
| TTAGGTGAAGCTCATTAAAG+AGG | 0.487388 | tig0023071:+94709 | Msa1404560:intron |
| CCGGGGTTTGCAGCATGGGT+GGG | 0.490309 | tig0023071:+87439 | Msa1404560:CDS |
| TTGCTAAGATCCGAGGATGT+AGG | 0.493652 | tig0023071:+87548 | Msa1404560:CDS |
| CAACTGCCAGATGGTTGTCC+GGG | 0.496423 | tig0023071:-86831 | Msa1404560:intergenic |
| TGATTCTTCCACGAAGATAA+GGG | 0.498487 | tig0023071:-86876 | Msa1404560:intergenic |
| ATGTGAGGCCAATAATTAGT+AGG | 0.506285 | tig0023071:-86632 | Msa1404560:intergenic |
| GATATGAATACATTTGATCC+TGG | 0.509392 | tig0023071:-87487 | Msa1404560:intergenic |
| GTACTAGCAGATCCAAAGCC+AGG | 0.512860 | tig0023071:+87469 | Msa1404560:CDS |
| TGCTAAGATCCGAGGATGTA+GGG | 0.515236 | tig0023071:+87549 | Msa1404560:CDS |
| TACAGTATTTGCAGTTGTAA+GGG | 0.519664 | tig0023071:+87033 | Msa1404560:CDS |
| TTCACAATATCAACTTAATG+AGG | 0.524883 | tig0023071:+86924 | Msa1404560:CDS |
| TATCTTCGTGGAAGAATCAC+TGG | 0.528184 | tig0023071:+86880 | Msa1404560:CDS |
| TCTTGCCAATGATTCAATCC+CGG | 0.534657 | tig0023071:+86813 | Msa1404560:CDS |
| GATAAGGGTCAACGGAGAGA+AGG | 0.541178 | tig0023071:-86861 | Msa1404560:intergenic |
| AAGTGAGAGAAAGCAGAGAA+TGG | 0.543823 | tig0023071:+86719 | Msa1404560:CDS |
| TGCCGATGACCCTACATCCT+CGG | 0.545063 | tig0023071:-87558 | Msa1404560:intergenic |
| GAGGAATTTGGATATGACGA+TGG | 0.547921 | tig0023071:+94728 | Msa1404560:CDS |
| ATCCGAGGATGTAGGGTCAT+CGG | 0.553113 | tig0023071:+87556 | Msa1404560:CDS |
| CAAGAGAAAGAGAGACAGTA+CGG | 0.556497 | tig0023071:-86795 | Msa1404560:intergenic |
| AGGAATTTGGATATGACGAT+GGG | 0.557883 | tig0023071:+94729 | Msa1404560:CDS |
| AGTTTGAGATGATCTGAGGT+TGG | 0.559656 | tig0023071:-86772 | Msa1404560:intergenic |
| CCCACCCATGCTGCAAACCC+CGG | 0.564167 | tig0023071:-87439 | Msa1404560:intergenic |
| AGAAAGCAGAGAATGGTACT+TGG | 0.569620 | tig0023071:+86726 | Msa1404560:CDS |
| AGAATCACTGGTACCTCAGA+AGG | 0.578814 | tig0023071:+86892 | Msa1404560:CDS |
| TGAAATGAAAAGACCTTCTG+AGG | 0.585073 | tig0023071:-86905 | Msa1404560:intergenic |
| ATCCTCGGATCTTAGCAAGC+TGG | 0.586327 | tig0023071:-87543 | Msa1404560:intergenic |
| GGTGCTGTCGGTATAAATGC+TGG | 0.589183 | tig0023071:+87520 | Msa1404560:CDS |
| AAGGATAGTAAATACAGTGA+GGG | 0.594157 | tig0023071:+87067 | Msa1404560:CDS |
| TCTGCTGCATCTGGTGCTGT+CGG | 0.598213 | tig0023071:+87508 | Msa1404560:CDS |
| TTGGCTGAATATTGTACTGA+AGG | 0.602772 | tig0023071:+86745 | Msa1404560:CDS |
| AGGATAGTAAATACAGTGAG+GGG | 0.615694 | tig0023071:+87068 | Msa1404560:CDS |
| TAGTTTGATTCTCACATGTG+AGG | 0.617829 | tig0023071:-86647 | Msa1404560:intergenic |
| GGAGAGTCTCAACTGCCAGA+TGG | 0.626678 | tig0023071:-86840 | Msa1404560:intergenic |
| ACTTAATTGCAGGAGTTCCG+GGG | 0.626738 | tig0023071:+87422 | Msa1404560:intron |
| TGTAAGGGTGATCAGATCGA+AGG | 0.628532 | tig0023071:+87048 | Msa1404560:CDS |
| TCCACGAAGATAAGGGTCAA+CGG | 0.631150 | tig0023071:-86869 | Msa1404560:intergenic |
| GAAGGATAGTAAATACAGTG+AGG | 0.633548 | tig0023071:+87066 | Msa1404560:CDS |
| ACGGAGTTTGAGATGATCTG+AGG | 0.638833 | tig0023071:-86776 | Msa1404560:intergenic |
| GGCCAGCTTGCTAAGATCCG+AGG | 0.644071 | tig0023071:+87541 | Msa1404560:CDS |
| GGATAGTAAATACAGTGAGG+GGG | 0.664890 | tig0023071:+87069 | Msa1404560:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | ATATTTTATATATTATTATT+TGG | + | tig0023071:89430-89449 | Msa1404560:intron | 0.0% |
| !!! | TATTTTATATATTATTATTT+GGG | + | tig0023071:89431-89450 | Msa1404560:intron | 0.0% |
| !! | ATATATATATATAAATTTAT+CGG | + | tig0023071:91781-91800 | Msa1404560:intron | 0.0% |
| !! | TAAAATATAAGATTTATTAG+GGG | - | tig0023071:87248-87267 | Msa1404560:intergenic | 10.0% |
| !! | AATAATCAATTATTATAAGT+CGG | + | tig0023071:88339-88358 | Msa1404560:intron | 10.0% |
| !! | TTATCATAAATAAATAAAAC+AGG | + | tig0023071:89297-89316 | Msa1404560:intron | 10.0% |
| !!! | TTTTGGATAAAATAAAATTT+TGG | - | tig0023071:89344-89363 | Msa1404560:intergenic | 10.0% |
| !! | TATTATTATGTATTATATTC+TGG | + | tig0023071:89365-89384 | Msa1404560:intron | 10.0% |
| !! | TAATATTTACAAGTTAATTA+GGG | - | tig0023071:89562-89581 | Msa1404560:intergenic | 10.0% |
| !! | ATAATATTTACAAGTTAATT+AGG | - | tig0023071:89563-89582 | Msa1404560:intergenic | 10.0% |
| !!! | AAATTTTGTCAAATTTTAAA+AGG | + | tig0023071:89994-90013 | Msa1404560:intron | 10.0% |
| !!! | ATGTTAATTGAATTTAAAAT+TGG | + | tig0023071:90372-90391 | Msa1404560:intron | 10.0% |
| !!! | TAATAACAAAAATTGTTATT+TGG | - | tig0023071:91165-91184 | Msa1404560:intergenic | 10.0% |
| !! | TAAATAGATTAACATTATAT+TGG | + | tig0023071:91408-91427 | Msa1404560:intron | 10.0% |
| !! | AATTCAAAATGTAATAATAT+TGG | - | tig0023071:91680-91699 | Msa1404560:intergenic | 10.0% |
| !! | TATATATATATAACACATTT+AGG | - | tig0023071:91712-91731 | Msa1404560:intergenic | 10.0% |
| !!! | CTTATATTTTATTATTATTG+AGG | - | tig0023071:92196-92215 | Msa1404560:intergenic | 10.0% |
| !!! | TTAAATACATATTTTATCAA+TGG | - | tig0023071:92550-92569 | Msa1404560:intergenic | 10.0% |
| !! | ATTGATAAAATATGTATTTA+AGG | + | tig0023071:92549-92568 | Msa1404560:intron | 10.0% |
| !! | TTGATAAAATATGTATTTAA+GGG | + | tig0023071:92550-92569 | Msa1404560:intron | 10.0% |
| !!! | AAAATTTAAAATTACATGTA+TGG | - | tig0023071:93804-93823 | Msa1404560:intergenic | 10.0% |
| !! | AATAATCAATTATTATAAGT+CGG | + | tig0023071:88339-88358 | Msa1404560:intron | 10.0% |
| !!! | CATTCATTTTATATATTTGT+AGG | + | tig0023071:87006-87025 | Msa1404560:intron | 15.0% |
| !! | TTGAATAGATAAATAAGTTA+AGG | + | tig0023071:88853-88872 | Msa1404560:intron | 15.0% |
| !! | TGAATAGATAAATAAGTTAA+GGG | + | tig0023071:88854-88873 | Msa1404560:intron | 15.0% |
| !! | ATCGCAAAAATAATAAAATA+AGG | - | tig0023071:88897-88916 | Msa1404560:intergenic | 15.0% |
| !!! | AATATTTTTTGCTTAAACTT+GGG | + | tig0023071:89269-89288 | Msa1404560:intron | 15.0% |
| !! | AATATTTACAAGTTAATTAG+GGG | - | tig0023071:89561-89580 | Msa1404560:intergenic | 15.0% |
| !!! | ATTTAAATCCCAAATTTTAA+GGG | - | tig0023071:89654-89673 | Msa1404560:intergenic | 15.0% |
| !!! | AATTTAAATCCCAAATTTTA+AGG | - | tig0023071:89655-89674 | Msa1404560:intergenic | 15.0% |
| !!! | AATGATCAATTAGTAAATTT+TGG | - | tig0023071:90231-90250 | Msa1404560:intergenic | 15.0% |
| !!! | TTTACTAATTGATCATTTTT+TGG | + | tig0023071:90234-90253 | Msa1404560:intron | 15.0% |
| !! | TTTGAAAACAAAATATTATG+AGG | - | tig0023071:90319-90338 | Msa1404560:intergenic | 15.0% |
| !! | AAAAAAACACAAATACAAAA+CGG | - | tig0023071:91057-91076 | Msa1404560:intergenic | 15.0% |
| !!! | TGTTTTTTTCTAATTTATAG+TGG | + | tig0023071:91068-91087 | Msa1404560:intron | 15.0% |
| !!! | GTTTTTTTCTAATTTATAGT+GGG | + | tig0023071:91069-91088 | Msa1404560:intron | 15.0% |
| !! | TGATAAAATATGTATTTAAG+GGG | + | tig0023071:92551-92570 | Msa1404560:intron | 15.0% |
| !! | AGTTTAAAGAAAAAAAAATG+TGG | - | tig0023071:93277-93296 | Msa1404560:intergenic | 15.0% |
| !!! | CGTTTTTTTTTTTATAAACT+TGG | + | tig0023071:93367-93386 | Msa1404560:intron | 15.0% |
| !!! | AAACTTATTACAACTTATTT+TGG | + | tig0023071:94682-94701 | Msa1404560:intron | 15.0% |
| !! | TTACAATACACTTTCTAATT+TGG | + | tig0023071:86571-86590 | Msa1404560:five_prime_UTR | 20.0% |
| !! | TACCAAAAAAAAAATTTGAG+AGG | - | tig0023071:86607-86626 | Msa1404560:intergenic | 20.0% |
| !!! | ATTTTATGACTTCCTTATAT+AGG | + | tig0023071:87279-87298 | Msa1404560:intron | 20.0% |
| !!! | TAAGTGTATCACATTAATTT+TGG | - | tig0023071:87407-87426 | Msa1404560:intergenic | 20.0% |
| !! | GACAAAAATTAAGAAATGAT+AGG | - | tig0023071:87608-87627 | Msa1404560:intergenic | 20.0% |
| !!! | TGATTAATCTAAAACAACAA+AGG | + | tig0023071:87767-87786 | Msa1404560:intron | 20.0% |
| !! | CAAAGGAAAAAAAAGTTATT+TGG | + | tig0023071:87784-87803 | Msa1404560:intron | 20.0% |
| !!! | AGATTACATGTTTTTTAATG+AGG | - | tig0023071:87958-87977 | Msa1404560:intergenic | 20.0% |
| !! | TATTAAAACATATTCCAACA+TGG | + | tig0023071:87980-87999 | Msa1404560:intron | 20.0% |
| !! | TTTCTTAGACAAATAAACAA+TGG | + | tig0023071:88184-88203 | Msa1404560:intron | 20.0% |
| !! | ACAATTCATAGTAAAAATCA+TGG | + | tig0023071:88218-88237 | Msa1404560:intron | 20.0% |
| !! | ACATTAAAACTTTCATCAAT+TGG | + | tig0023071:88718-88737 | Msa1404560:intron | 20.0% |
| !! | CAAGTTTAAGCAAAAAATAT+TGG | - | tig0023071:89270-89289 | Msa1404560:intergenic | 20.0% |
| !!! | CAATATTTTTTGCTTAAACT+TGG | + | tig0023071:89268-89287 | Msa1404560:intron | 20.0% |
| !!! | ATATTTTTTGCTTAAACTTG+GGG | + | tig0023071:89270-89289 | Msa1404560:intron | 20.0% |
| !!! | TCAAATCTTGCAAATATTTT+GGG | - | tig0023071:89620-89639 | Msa1404560:intergenic | 20.0% |
| !!! | ATCAAATCTTGCAAATATTT+TGG | - | tig0023071:89621-89640 | Msa1404560:intergenic | 20.0% |
| !! | TATTCTTTACCCTTAAAATT+TGG | + | tig0023071:89642-89661 | Msa1404560:intron | 20.0% |
| !! | ATTCTTTACCCTTAAAATTT+GGG | + | tig0023071:89643-89662 | Msa1404560:intron | 20.0% |
| !! | ATAAAAGAATACTTTCTCAT+AGG | - | tig0023071:89771-89790 | Msa1404560:intergenic | 20.0% |
| !!! | TATGAGAAAGTATTCTTTTA+TGG | + | tig0023071:89770-89789 | Msa1404560:intron | 20.0% |
| !! | TATTCTTGATCTTGATTTAT+GGG | + | tig0023071:89965-89984 | Msa1404560:intron | 20.0% |
| !!! | GTGAATTTTCAAAATAGTTT+AGG | - | tig0023071:90068-90087 | Msa1404560:intergenic | 20.0% |
| !!! | TCTTGCTGTAATTAAATATT+TGG | + | tig0023071:90491-90510 | Msa1404560:intron | 20.0% |
| !! | TATATAAGAACTCAGATATA+AGG | - | tig0023071:90691-90710 | Msa1404560:intergenic | 20.0% |
| !!! | TGTTTAGAATATTCTGAAAA+AGG | - | tig0023071:90995-91014 | Msa1404560:intergenic | 20.0% |
| !! | ACTTATATTAATCTCATTCA+AGG | - | tig0023071:91609-91628 | Msa1404560:intergenic | 20.0% |
| !! | CAATGATAGTTGAATTAAAA+AGG | - | tig0023071:91925-91944 | Msa1404560:intergenic | 20.0% |
| !!! | TTGCTATTCTTTAATACTTA+TGG | + | tig0023071:92144-92163 | Msa1404560:intron | 20.0% |
| !! | ACTATGTTTATAAAATTCTG+TGG | + | tig0023071:92403-92422 | Msa1404560:intron | 20.0% |
| !! | ATATTCTGCATTTACAATTA+AGG | - | tig0023071:92490-92509 | Msa1404560:intergenic | 20.0% |
| !! | ATAATGTAATATTCAACAGT+GGG | - | tig0023071:92719-92738 | Msa1404560:intergenic | 20.0% |
| !! | AATAATGTAATATTCAACAG+TGG | - | tig0023071:92720-92739 | Msa1404560:intergenic | 20.0% |
| !! | TATATATAAACAAGAGTAAG+TGG | - | tig0023071:92778-92797 | Msa1404560:intergenic | 20.0% |
| !!! | TACTCTTGTTTATATATATG+TGG | + | tig0023071:92780-92799 | Msa1404560:intron | 20.0% |
| !!! | ACTCTTGTTTATATATATGT+GGG | + | tig0023071:92781-92800 | Msa1404560:intron | 20.0% |
| !!! | AAAAAAAATGTGGATTAATG+TGG | - | tig0023071:93267-93286 | Msa1404560:intergenic | 20.0% |
| !!! | AATTTCCTATTTTGCTTTTA+TGG | + | tig0023071:93331-93350 | Msa1404560:intron | 20.0% |
| !! | AAAATCCATAAAAGCAAAAT+AGG | - | tig0023071:93339-93358 | Msa1404560:intergenic | 20.0% |
| !! | ACGAATAGTAATTACTTATA+GGG | - | tig0023071:93461-93480 | Msa1404560:intergenic | 20.0% |
| !!! | TGATTAAGTCTATGTTATTT+TGG | + | tig0023071:93580-93599 | Msa1404560:intron | 20.0% |
| !!! | GATTAAGTCTATGTTATTTT+GGG | + | tig0023071:93581-93600 | Msa1404560:intron | 20.0% |
| !!! | ACAACATTTTTTAAAATGCT+TGG | + | tig0023071:93620-93639 | Msa1404560:intron | 20.0% |
| !!! | CAACATTTTTTAAAATGCTT+GGG | + | tig0023071:93621-93640 | Msa1404560:intron | 20.0% |
| !! | CGGTATCATAATATAAATTA+TGG | + | tig0023071:93950-93969 | Msa1404560:intron | 20.0% |
| !!! | ACAACTTATTTTGGATTTTT+AGG | + | tig0023071:94691-94710 | Msa1404560:intron | 20.0% |
| ! | CAAAAAAAAAATTTGAGAGG+AGG | - | tig0023071:86604-86623 | Msa1404560:intergenic | 25.0% |
| !!! | CTCCTCTCAAATTTTTTTTT+TGG | + | tig0023071:86602-86621 | Msa1404560:five_prime_UTR | 25.0% |
| ! | GTAATACACCTACTAATTAT+TGG | + | tig0023071:86624-86643 | Msa1404560:five_prime_UTR | 25.0% |
| ! | TATCTATTAATCCAACTATC+AGG | + | tig0023071:86668-86687 | Msa1404560:five_prime_UTR | 25.0% |
| ! | CAGAAAGTAAGTAAAAACAT+GGG | + | tig0023071:86694-86713 | Msa1404560:exon | 25.0% |
| ! | TTCACAATATCAACTTAATG+AGG | + | tig0023071:86924-86943 | Msa1404560:CDS | 25.0% |
| !!! | TTTCTAGTTATTTGAGAAGA+GGG | - | tig0023071:87142-87161 | Msa1404560:intergenic | 25.0% |
| !!! | TTTTCTAGTTATTTGAGAAG+AGG | - | tig0023071:87143-87162 | Msa1404560:intergenic | 25.0% |
| ! | ATTTCTTTGTCTGATTATCT+TGG | + | tig0023071:87181-87200 | Msa1404560:CDS | 25.0% |
| ! | TCCTTATATAGGTACATAAT+CGG | + | tig0023071:87290-87309 | Msa1404560:intron | 25.0% |
| ! | TTAGAACTTCAACAAAATCA+CGG | - | tig0023071:87368-87387 | Msa1404560:intergenic | 25.0% |
| ! | TAATTTATTTCCTACCATGT+TGG | - | tig0023071:87997-88016 | Msa1404560:intergenic | 25.0% |
| ! | AAGTAAACAAGATGAAAATG+TGG | - | tig0023071:88086-88105 | Msa1404560:intergenic | 25.0% |
| !!! | ACATTTTCATCTTGTTTACT+TGG | + | tig0023071:88085-88104 | Msa1404560:intron | 25.0% |
| ! | TTTCTATCAATTGTGTTAGT+AGG | - | tig0023071:88151-88170 | Msa1404560:intergenic | 25.0% |
| ! | TTAGACAAATAAACAATGGA+AGG | + | tig0023071:88188-88207 | Msa1404560:intron | 25.0% |
| !!! | CGGTGTCATAATATAAATTA+TGG | + | tig0023071:88359-88378 | Msa1404560:intron | 25.0% |
| ! | ATATGATGAATTTGAGTGAT+TGG | + | tig0023071:88404-88423 | Msa1404560:intron | 25.0% |
| ! | TATGATGAATTTGAGTGATT+GGG | + | tig0023071:88405-88424 | Msa1404560:intron | 25.0% |
| ! | ATGACGTTTAAATAGCTAAA+CGG | - | tig0023071:88502-88521 | Msa1404560:intergenic | 25.0% |
| ! | AAATTGTGTACCTTTGAATT+AGG | - | tig0023071:88639-88658 | Msa1404560:intergenic | 25.0% |
| !! | ATAATTTGTATCTAGTGATC+TGG | + | tig0023071:88691-88710 | Msa1404560:intron | 25.0% |
| ! | AGCCAAATAGATACAATTTA+TGG | + | tig0023071:88747-88766 | Msa1404560:intron | 25.0% |
| ! | AGCCATAAATTGTATCTATT+TGG | - | tig0023071:88752-88771 | Msa1404560:intergenic | 25.0% |
| !!! | TAGAAGTTTTAATCACCAAA+GGG | - | tig0023071:88920-88939 | Msa1404560:intergenic | 25.0% |
| !!! | ATAGAAGTTTTAATCACCAA+AGG | - | tig0023071:88921-88940 | Msa1404560:intergenic | 25.0% |
| !! | TTTGGTGATTAAAACTTCTA+TGG | + | tig0023071:88920-88939 | Msa1404560:intron | 25.0% |
| !!! | CTGATTGAATTAATTTGTTG+TGG | - | tig0023071:89009-89028 | Msa1404560:intergenic | 25.0% |
| ! | AATTCAATCAGTATGAAAAC+CGG | + | tig0023071:89018-89037 | Msa1404560:intron | 25.0% |
| !!! | TGTGTCAATTCTATTTTGAT+CGG | + | tig0023071:89086-89105 | Msa1404560:intron | 25.0% |
| ! | TGATTCCTGAAATTAATCAA+GGG | + | tig0023071:89109-89128 | Msa1404560:intron | 25.0% |
| ! | GTATTATATTCTGGTCATAT+TGG | + | tig0023071:89374-89393 | Msa1404560:intron | 25.0% |
| !! | GACAAGACAAATAATTTTGA+GGG | - | tig0023071:89915-89934 | Msa1404560:intergenic | 25.0% |
| !! | TGACAAGACAAATAATTTTG+AGG | - | tig0023071:89916-89935 | Msa1404560:intergenic | 25.0% |
| ! | CTATTCTTGATCTTGATTTA+TGG | + | tig0023071:89964-89983 | Msa1404560:intron | 25.0% |
| !! | TACTATTGTGAATTTCTAGA+AGG | + | tig0023071:90129-90148 | Msa1404560:intron | 25.0% |
| !!! | TTGTCACAAATTGTTTTGAT+GGG | + | tig0023071:90292-90311 | Msa1404560:intron | 25.0% |
| ! | TTAACAGATAAACAACAAAG+AGG | - | tig0023071:90614-90633 | Msa1404560:intergenic | 25.0% |
| ! | AAACAACTTATTGAGAATTG+AGG | + | tig0023071:90643-90662 | Msa1404560:intron | 25.0% |
| ! | AAAGGATTTCACTTCTATAT+AGG | - | tig0023071:90977-90996 | Msa1404560:intergenic | 25.0% |
| !!! | TTATTCTAAGAGTTCTTTTG+TGG | + | tig0023071:91106-91125 | Msa1404560:intron | 25.0% |
| ! | TGAAATAGAGACTTATATTG+AGG | + | tig0023071:92106-92125 | Msa1404560:intron | 25.0% |
| ! | CACAAATTTGAGAAACAATT+AGG | - | tig0023071:92244-92263 | Msa1404560:intergenic | 25.0% |
| !!! | GTGGAATTTTAATTGTGAAA+AGG | + | tig0023071:92422-92441 | Msa1404560:intron | 25.0% |
| ! | AATTGTAAATGCAGAATATG+TGG | + | tig0023071:92491-92510 | Msa1404560:intron | 25.0% |
| ! | AGCAGAATTATTAACACAAT+TGG | - | tig0023071:92598-92617 | Msa1404560:intergenic | 25.0% |
| ! | GAATATGCACAATAATTTCT+TGG | + | tig0023071:93068-93087 | Msa1404560:intron | 25.0% |
| ! | ATTTATGACCTCATAAAATG+TGG | - | tig0023071:93132-93151 | Msa1404560:intergenic | 25.0% |
| !!! | AGTATGATATTGTGTTTTTG+TGG | + | tig0023071:93187-93206 | Msa1404560:intron | 25.0% |
| !!! | TTTTGTTATTGACATTCTAG+TGG | + | tig0023071:93241-93260 | Msa1404560:intron | 25.0% |
| ! | TGTCTATGTTAATCCAATTT+GGG | + | tig0023071:93300-93319 | Msa1404560:intron | 25.0% |
| ! | AAATTCAATAATCCCCAAAT+TGG | - | tig0023071:93316-93335 | Msa1404560:intergenic | 25.0% |
| ! | TGTAATTACACTCTCTTAAT+AGG | + | tig0023071:93431-93450 | Msa1404560:intron | 25.0% |
| ! | CACGAATAGTAATTACTTAT+AGG | - | tig0023071:93462-93481 | Msa1404560:intergenic | 25.0% |
| ! | CTGTAATATTGAAAACTCAT+TGG | + | tig0023071:93504-93523 | Msa1404560:intron | 25.0% |
| ! | TACTCATATATATAAGTCTG+TGG | - | tig0023071:93542-93561 | Msa1404560:intergenic | 25.0% |
| ! | ATATGATGAATTTGAGTGAT+TGG | + | tig0023071:88404-88423 | Msa1404560:intron | 25.0% |
| ! | TATGATGAATTTGAGTGATT+GGG | + | tig0023071:88405-88424 | Msa1404560:intron | 25.0% |
| ! | ATGACGTTTAAATAGCTAAA+CGG | - | tig0023071:88502-88521 | Msa1404560:intergenic | 25.0% |
| ! | AAATTGTGTACCTTTGAATT+AGG | - | tig0023071:88639-88658 | Msa1404560:intergenic | 25.0% |
| !! | ATAATTTGTATCTAGTGATC+TGG | + | tig0023071:88691-88710 | Msa1404560:intron | 25.0% |
| !! | CCATGTTTTTACTTACTTTC+TGG | - | tig0023071:86696-86715 | Msa1404560:intergenic | 30.0% |
| CCAGAAAGTAAGTAAAAACA+TGG | + | tig0023071:86693-86712 | Msa1404560:exon | 30.0% | |
| TTACAGTATTTGCAGTTGTA+AGG | + | tig0023071:87032-87051 | Msa1404560:CDS | 30.0% | |
| TACAGTATTTGCAGTTGTAA+GGG | + | tig0023071:87033-87052 | Msa1404560:CDS | 30.0% | |
| AAGGATAGTAAATACAGTGA+GGG | + | tig0023071:87067-87086 | Msa1404560:CDS | 30.0% | |
| ACAATACTATATTCAGCAAC+TGG | - | tig0023071:87118-87137 | Msa1404560:intergenic | 30.0% | |
| AGAAAAATTGACACTTCAAG+TGG | + | tig0023071:87157-87176 | Msa1404560:CDS | 30.0% | |
| GAAAAATTGACACTTCAAGT+GGG | + | tig0023071:87158-87177 | Msa1404560:CDS | 30.0% | |
| ! | TCTGATTATCTTGGTTCTTT+AGG | + | tig0023071:87190-87209 | Msa1404560:CDS | 30.0% |
| ACCGATTATGTACCTATATA+AGG | - | tig0023071:87294-87313 | Msa1404560:intergenic | 30.0% | |
| AATGTGATACACTTAATTGC+AGG | + | tig0023071:87412-87431 | Msa1404560:intron | 30.0% | |
| GATATGAATACATTTGATCC+TGG | - | tig0023071:87490-87509 | Msa1404560:intergenic | 30.0% | |
| !! | TCTTTGAAATCACTAGATCA+TGG | + | tig0023071:87628-87647 | Msa1404560:intron | 30.0% |
| CTGTCAAAAATTTAGTGACA+TGG | + | tig0023071:87816-87835 | Msa1404560:intron | 30.0% | |
| CAGTTAAGCACAAAAGAAAA+AGG | - | tig0023071:87870-87889 | Msa1404560:intergenic | 30.0% | |
| AAAACATATTCCAACATGGT+AGG | + | tig0023071:87984-88003 | Msa1404560:intron | 30.0% | |
| TCACTTTCTCATTCATTTCA+TGG | - | tig0023071:88058-88077 | Msa1404560:intergenic | 30.0% | |
| TTGATAGAAACACCTAACAA+AGG | + | tig0023071:88161-88180 | Msa1404560:intron | 30.0% | |
| TTGTCTAAGAAACCTTTGTT+AGG | - | tig0023071:88176-88195 | Msa1404560:intergenic | 30.0% | |
| ! | ATTGGGCTTTTGTAACTAAA+TGG | + | tig0023071:88422-88441 | Msa1404560:intron | 30.0% |
| AGAACAATTAACCGTCTAAT+GGG | - | tig0023071:88525-88544 | Msa1404560:intergenic | 30.0% | |
| ! | GTTAATTGTTCTGAATGTCA+TGG | + | tig0023071:88533-88552 | Msa1404560:intron | 30.0% |
| ATATCATCAGTGACAAAAGA+AGG | - | tig0023071:88668-88687 | Msa1404560:intergenic | 30.0% | |
| ! | AGTGCATCGATATTCAAATA+TGG | - | tig0023071:88789-88808 | Msa1404560:intergenic | 30.0% |
| !!! | TATTATTTTTGCGATCCCTT+TGG | + | tig0023071:88902-88921 | Msa1404560:intron | 30.0% |
| ATAACAGAATTGTAGAACAC+CGG | - | tig0023071:89040-89059 | Msa1404560:intergenic | 30.0% | |
| GTGATTCCTGAAATTAATCA+AGG | + | tig0023071:89108-89127 | Msa1404560:intron | 30.0% | |
| ATAGTCATCAGAAAGTAAAC+GGG | - | tig0023071:89245-89264 | Msa1404560:intergenic | 30.0% | |
| CATAGTCATCAGAAAGTAAA+CGG | - | tig0023071:89246-89265 | Msa1404560:intergenic | 30.0% | |
| TGAAAAAATTCTCGTTCTCT+TGG | + | tig0023071:89508-89527 | Msa1404560:intron | 30.0% | |
| !!! | CTTGTCACAAATTGTTTTGA+TGG | + | tig0023071:90291-90310 | Msa1404560:intron | 30.0% |
| GTTAAGTCATCAAAATTCAG+TGG | + | tig0023071:90812-90831 | Msa1404560:intron | 30.0% | |
| AATAAGCAATAAGTCACAAG+AGG | - | tig0023071:90898-90917 | Msa1404560:intergenic | 30.0% | |
| TTAATAACAACACACCGATA+GGG | - | tig0023071:91445-91464 | Msa1404560:intergenic | 30.0% | |
| ATTAATAACAACACACCGAT+AGG | - | tig0023071:91446-91465 | Msa1404560:intergenic | 30.0% | |
| ATTGTCTATTCTCTATCAAG+TGG | + | tig0023071:91941-91960 | Msa1404560:intron | 30.0% | |
| TTGTCTATTCTCTATCAAGT+GGG | + | tig0023071:91942-91961 | Msa1404560:intron | 30.0% | |
| TAAGTAATGTCATACCGATA+GGG | - | tig0023071:92006-92025 | Msa1404560:intergenic | 30.0% | |
| TTAAGTAATGTCATACCGAT+AGG | - | tig0023071:92007-92026 | Msa1404560:intergenic | 30.0% | |
| ! | TGAGATGAGTCTCTAAAAAT+AGG | - | tig0023071:92330-92349 | Msa1404560:intergenic | 30.0% |
| CATCATACTCTGTCATATAA+CGG | + | tig0023071:92378-92397 | Msa1404560:intron | 30.0% | |
| ! | TTAACACAATTGGTAACTCA+AGG | - | tig0023071:92588-92607 | Msa1404560:intergenic | 30.0% |
| TTGAGTTCATGAAACTCTAT+TGG | + | tig0023071:92641-92660 | Msa1404560:intron | 30.0% | |
| TTATATATATGTGGGATCAG+TGG | + | tig0023071:92789-92808 | Msa1404560:intron | 30.0% | |
| TATATATATGTGGGATCAGT+GGG | + | tig0023071:92790-92809 | Msa1404560:intron | 30.0% | |
| CTTGTGCACACTATAAAATA+TGG | + | tig0023071:92933-92952 | Msa1404560:intron | 30.0% | |
| ATCTCAATGAGCATCATAAT+TGG | + | tig0023071:93024-93043 | Msa1404560:intron | 30.0% | |
| ! | GATGCTTAAGTCAATTTTGT+TGG | + | tig0023071:93046-93065 | Msa1404560:intron | 30.0% |
| AACACAATATCATACTCGAT+AGG | - | tig0023071:93183-93202 | Msa1404560:intergenic | 30.0% | |
| GTGTCTATGTTAATCCAATT+TGG | + | tig0023071:93299-93318 | Msa1404560:intron | 30.0% | |
| GTCTATGTTAATCCAATTTG+GGG | + | tig0023071:93301-93320 | Msa1404560:intron | 30.0% | |
| ATATATAAGTCTGTGGTTAG+TGG | - | tig0023071:93535-93554 | Msa1404560:intergenic | 30.0% | |
| !!! | TCTATGTTATTTTGGGTTAG+TGG | + | tig0023071:93588-93607 | Msa1404560:intron | 30.0% |
| !!! | CTATGTTATTTTGGGTTAGT+GGG | + | tig0023071:93589-93608 | Msa1404560:intron | 30.0% |
| !!! | GTATGATTTGTTTTCCCTAT+CGG | + | tig0023071:93723-93742 | Msa1404560:intron | 30.0% |
| ! | ATTGGGCTTTTGTAACTAAA+TGG | + | tig0023071:88422-88441 | Msa1404560:intron | 30.0% |
| AGAACAATTAACCGTCTAAT+GGG | - | tig0023071:88525-88544 | Msa1404560:intergenic | 30.0% | |
| ! | GTTAATTGTTCTGAATGTCA+TGG | + | tig0023071:88533-88552 | Msa1404560:intron | 30.0% |
| ATATCATCAGTGACAAAAGA+AGG | - | tig0023071:88668-88687 | Msa1404560:intergenic | 30.0% | |
| AATTGATGTACAAGCCAAAT+CGG | - | tig0023071:94506-94525 | Msa1404560:intergenic | 30.0% | |
| AAGCTCATTAAAGAGGAATT+TGG | + | tig0023071:94716-94735 | Msa1404560:CDS | 30.0% | |
| ATGTGAGGCCAATAATTAGT+AGG | - | tig0023071:86635-86654 | Msa1404560:intergenic | 35.0% | |
| TAGTTTGATTCTCACATGTG+AGG | - | tig0023071:86650-86669 | Msa1404560:intergenic | 35.0% | |
| TTGGCTGAATATTGTACTGA+AGG | + | tig0023071:86745-86764 | Msa1404560:CDS | 35.0% | |
| TGATTCTTCCACGAAGATAA+GGG | - | tig0023071:86879-86898 | Msa1404560:intergenic | 35.0% | |
| TGAAATGAAAAGACCTTCTG+AGG | - | tig0023071:86908-86927 | Msa1404560:intergenic | 35.0% | |
| GAAGGATAGTAAATACAGTG+AGG | + | tig0023071:87066-87085 | Msa1404560:CDS | 35.0% | |
| AGGATAGTAAATACAGTGAG+GGG | + | tig0023071:87068-87087 | Msa1404560:CDS | 35.0% | |
| GTACATAATCGGTACATGTT+TGG | + | tig0023071:87301-87320 | Msa1404560:intron | 35.0% | |
| AATACATTTGATCCTGGCTT+TGG | - | tig0023071:87484-87503 | Msa1404560:intergenic | 35.0% | |
| ! | TTTTCTCCTCTGTCAAACTA+TGG | - | tig0023071:87930-87949 | Msa1404560:intergenic | 35.0% |
| ATTGTGTTAGTAGGACTATG+TGG | - | tig0023071:88142-88161 | Msa1404560:intergenic | 35.0% | |
| AAAAATCATGGCTCAAGTGA+TGG | + | tig0023071:88230-88249 | Msa1404560:intron | 35.0% | |
| ATTACATCATCTGCACTAGA+AGG | - | tig0023071:88280-88299 | Msa1404560:intergenic | 35.0% | |
| AGTGCAGATGATGTAATTGT+TGG | + | tig0023071:88283-88302 | Msa1404560:intron | 35.0% | |
| TCTCATTGGGCTTATCTAAA+TGG | - | tig0023071:88464-88483 | Msa1404560:intergenic | 35.0% | |
| ATTTAGATAAGCCCAATGAG+AGG | + | tig0023071:88463-88482 | Msa1404560:intron | 35.0% | |
| TTAAATAGCTAAACGGCTGA+GGG | - | tig0023071:88495-88514 | Msa1404560:intergenic | 35.0% | |
| TTTAAATAGCTAAACGGCTG+AGG | - | tig0023071:88496-88515 | Msa1404560:intergenic | 35.0% | |
| TTAAACGTCATCCCATTAGA+CGG | + | tig0023071:88511-88530 | Msa1404560:intron | 35.0% | |
| CAGAACAATTAACCGTCTAA+TGG | - | tig0023071:88526-88545 | Msa1404560:intergenic | 35.0% | |
| !! | CCTTTGAATTAGGTTGATGA+AGG | - | tig0023071:88629-88648 | Msa1404560:intergenic | 35.0% |
| CCTTCATCAACCTAATTCAA+AGG | + | tig0023071:88626-88645 | Msa1404560:intron | 35.0% | |
| TTATCCATCGTACTGTAACA+TGG | + | tig0023071:88812-88831 | Msa1404560:intron | 35.0% | |
| CACAAAAGGTCTAGAAATAG+TGG | - | tig0023071:88946-88965 | Msa1404560:intergenic | 35.0% | |
| !!! | CTATTTCTAGACCTTTTGTG+AGG | + | tig0023071:88946-88965 | Msa1404560:intron | 35.0% |
| TAGAATTGACACAGATCGAA+GGG | - | tig0023071:89079-89098 | Msa1404560:intergenic | 35.0% | |
| ATAGAATTGACACAGATCGA+AGG | - | tig0023071:89080-89099 | Msa1404560:intergenic | 35.0% | |
| AGAAGCCCTTGATTAATTTC+AGG | - | tig0023071:89117-89136 | Msa1404560:intergenic | 35.0% | |
| ! | GACGGGTTTCATTCAATATA+CGG | - | tig0023071:89193-89212 | Msa1404560:intergenic | 35.0% |
| GTATATTGAATGAAACCCGT+CGG | + | tig0023071:89192-89211 | Msa1404560:intron | 35.0% | |
| TATATTGAATGAAACCCGTC+GGG | + | tig0023071:89193-89212 | Msa1404560:intron | 35.0% | |
| CGTTTACTTTCTGATGACTA+TGG | + | tig0023071:89244-89263 | Msa1404560:intron | 35.0% | |
| TAAATAAAACAGGCCACGTA+CGG | + | tig0023071:89307-89326 | Msa1404560:intron | 35.0% | |
| !! | CAAAGTGTCGTAAAAGAGTA+AGG | - | tig0023071:89490-89509 | Msa1404560:intergenic | 35.0% |
| !! | ATTCAGTGGCTCTAAGTATA+AGG | + | tig0023071:90826-90845 | Msa1404560:intron | 35.0% |
| AATTGTAATCTCACCTATCG+TGG | + | tig0023071:91364-91383 | Msa1404560:intron | 35.0% | |
| ATTGTAATCTCACCTATCGT+GGG | + | tig0023071:91365-91384 | Msa1404560:intron | 35.0% | |
| CTATGTATTCTGTAACGTGA+TGG | + | tig0023071:91975-91994 | Msa1404560:intron | 35.0% | |
| AACAATTAGGTTACAAGCAG+CGG | - | tig0023071:92231-92250 | Msa1404560:intergenic | 35.0% | |
| GGCAGATATCATCAAGAATT+GGG | - | tig0023071:92529-92548 | Msa1404560:intergenic | 35.0% | |
| TGGCAGATATCATCAAGAAT+TGG | - | tig0023071:92530-92549 | Msa1404560:intergenic | 35.0% | |
| ATGCTCATGTGCAAAATATG+TGG | + | tig0023071:92618-92637 | Msa1404560:intron | 35.0% | |
| TGCAAGATCATCAACATAAG+TGG | - | tig0023071:92681-92700 | Msa1404560:intergenic | 35.0% | |
| ! | ATAGTGTGCACAAGAGTATA+TGG | - | tig0023071:92927-92946 | Msa1404560:intergenic | 35.0% |
| CCTCATAAAATGTGGAATGT+TGG | - | tig0023071:93124-93143 | Msa1404560:intergenic | 35.0% | |
| ! | CCAACATTCCACATTTTATG+AGG | + | tig0023071:93121-93140 | Msa1404560:intron | 35.0% |
| TTACTATTCGTGTACCTATG+TGG | + | tig0023071:93470-93489 | Msa1404560:intron | 35.0% | |
| CAGAAGTCATATATCCACAT+AGG | - | tig0023071:93487-93506 | Msa1404560:intergenic | 35.0% | |
| TGCAGAAATTGAATCCGATA+GGG | - | tig0023071:93740-93759 | Msa1404560:intergenic | 35.0% | |
| ! | ATTGAGTATTGTCATCCAAG+TGG | + | tig0023071:93863-93882 | Msa1404560:intron | 35.0% |
| ! | TTGAGTATTGTCATCCAAGT+GGG | + | tig0023071:93864-93883 | Msa1404560:intron | 35.0% |
| TCTCATTGGGCTTATCTAAA+TGG | - | tig0023071:88464-88483 | Msa1404560:intergenic | 35.0% | |
| ATTTAGATAAGCCCAATGAG+AGG | + | tig0023071:88463-88482 | Msa1404560:intron | 35.0% | |
| TTAAATAGCTAAACGGCTGA+GGG | - | tig0023071:88495-88514 | Msa1404560:intergenic | 35.0% | |
| TTTAAATAGCTAAACGGCTG+AGG | - | tig0023071:88496-88515 | Msa1404560:intergenic | 35.0% | |
| TTAAACGTCATCCCATTAGA+CGG | + | tig0023071:88511-88530 | Msa1404560:intron | 35.0% | |
| CAGAACAATTAACCGTCTAA+TGG | - | tig0023071:88526-88545 | Msa1404560:intergenic | 35.0% | |
| !! | CCTTTGAATTAGGTTGATGA+AGG | - | tig0023071:88629-88648 | Msa1404560:intergenic | 35.0% |
| CCTTCATCAACCTAATTCAA+AGG | + | tig0023071:88626-88645 | Msa1404560:intron | 35.0% | |
| TAAAGGGTCTATCAGAAAAC+AGG | - | tig0023071:94427-94446 | Msa1404560:intergenic | 35.0% | |
| CAAGGTTATGACAGTCTAAA+GGG | - | tig0023071:94443-94462 | Msa1404560:intergenic | 35.0% | |
| ACAAGGTTATGACAGTCTAA+AGG | - | tig0023071:94444-94463 | Msa1404560:intergenic | 35.0% | |
| GAATCATGAAACAAAGCACA+AGG | - | tig0023071:94461-94480 | Msa1404560:intergenic | 35.0% | |
| ! | GATTCCCATTTTCGTAAATC+AGG | + | tig0023071:94476-94495 | Msa1404560:intron | 35.0% |
| TGGACCTGATTTACGAAAAT+GGG | - | tig0023071:94483-94502 | Msa1404560:intergenic | 35.0% | |
| TTCATCATTCCTTCAATACG+AGG | - | tig0023071:94602-94621 | Msa1404560:intergenic | 35.0% | |
| AGGAATGATGAAATTGCTTG+AGG | + | tig0023071:94610-94629 | Msa1404560:intron | 35.0% | |
| TTAGGTGAAGCTCATTAAAG+AGG | + | tig0023071:94709-94728 | Msa1404560:intron | 35.0% | |
| AGGAATTTGGATATGACGAT+GGG | + | tig0023071:94729-94748 | Msa1404560:CDS | 35.0% | |
| AAGTGAGAGAAAGCAGAGAA+TGG | + | tig0023071:86719-86738 | Msa1404560:CDS | 40.0% | |
| AGAAAGCAGAGAATGGTACT+TGG | + | tig0023071:86726-86745 | Msa1404560:CDS | 40.0% | |
| ! | AGTTTGAGATGATCTGAGGT+TGG | - | tig0023071:86775-86794 | Msa1404560:intergenic | 40.0% |
| CAAGAGAAAGAGAGACAGTA+CGG | - | tig0023071:86798-86817 | Msa1404560:intergenic | 40.0% | |
| TCTTGCCAATGATTCAATCC+CGG | + | tig0023071:86813-86832 | Msa1404560:CDS | 40.0% | |
| GTGATTCTTCCACGAAGATA+AGG | - | tig0023071:86880-86899 | Msa1404560:intergenic | 40.0% | |
| TATCTTCGTGGAAGAATCAC+TGG | + | tig0023071:86880-86899 | Msa1404560:CDS | 40.0% | |
| GGATAGTAAATACAGTGAGG+GGG | + | tig0023071:87069-87088 | Msa1404560:CDS | 40.0% | |
| ! | TATTCAGCAACTGGAGCATT+TGG | - | tig0023071:87109-87128 | Msa1404560:intergenic | 40.0% |
| ACACTTAATTGCAGGAGTTC+CGG | + | tig0023071:87420-87439 | Msa1404560:intron | 40.0% | |
| GTATTCATATCTGCTGCATC+TGG | + | tig0023071:87499-87518 | Msa1404560:CDS | 40.0% | |
| TGCAAGGGTGAAGTAAATGT+TGG | + | tig0023071:87661-87680 | Msa1404560:intron | 40.0% | |
| GCAAGGGTGAAGTAAATGTT+GGG | + | tig0023071:87662-87681 | Msa1404560:intron | 40.0% | |
| TGTAACTAAATGGACCGTGA+TGG | + | tig0023071:88432-88451 | Msa1404560:intron | 40.0% | |
| GTAACTAAATGGACCGTGAT+GGG | + | tig0023071:88433-88452 | Msa1404560:intron | 40.0% | |
| GTTATCCCTCTCATAGTTGT+CGG | + | tig0023071:88587-88606 | Msa1404560:intron | 40.0% | |
| ATTGCCATGTTACAGTACGA+TGG | - | tig0023071:88819-88838 | Msa1404560:intergenic | 40.0% | |
| ! | ATAACCATTTTGCCTGGGTT+GGG | - | tig0023071:89161-89180 | Msa1404560:intergenic | 40.0% |
| TTTCATTCAATATACGGCGG+CGG | - | tig0023071:89187-89206 | Msa1404560:intergenic | 40.0% | |
| GGGTTTCATTCAATATACGG+CGG | - | tig0023071:89190-89209 | Msa1404560:intergenic | 40.0% | |
| ! | GAAAGTAAACGGGTTTAACC+CGG | - | tig0023071:89235-89254 | Msa1404560:intergenic | 40.0% |
| ! | GGAATTTTTATAGCCGTACG+TGG | - | tig0023071:89323-89342 | Msa1404560:intergenic | 40.0% |
| TGCATAATTGTACCCACGAT+AGG | - | tig0023071:91380-91399 | Msa1404560:intergenic | 40.0% | |
| TGGTAACAGTCATACCCTAT+CGG | + | tig0023071:91428-91447 | Msa1404560:intron | 40.0% | |
| ! | TCCCTTTGTTATGTGAGTGA+CGG | + | tig0023071:91814-91833 | Msa1404560:intron | 40.0% |
| TCCGTCACTCACATAACAAA+GGG | - | tig0023071:91818-91837 | Msa1404560:intergenic | 40.0% | |
| TAAGTAACGTCACACCGATA+GGG | - | tig0023071:91845-91864 | Msa1404560:intergenic | 40.0% | |
| TTAAGTAACGTCACACCGAT+AGG | - | tig0023071:91846-91865 | Msa1404560:intergenic | 40.0% | |
| CTGCAGAAATTGAATCCGAT+AGG | - | tig0023071:93741-93760 | Msa1404560:intergenic | 40.0% | |
| TAATCCAACAATCTCCCACT+TGG | - | tig0023071:93881-93900 | Msa1404560:intergenic | 40.0% | |
| TGTAACTAAATGGACCGTGA+TGG | + | tig0023071:88432-88451 | Msa1404560:intron | 40.0% | |
| GTAACTAAATGGACCGTGAT+GGG | + | tig0023071:88433-88452 | Msa1404560:intron | 40.0% | |
| GTTATCCCTCTCATAGTTGT+CGG | + | tig0023071:88587-88606 | Msa1404560:intron | 40.0% | |
| GTGGACCTGATTTACGAAAA+TGG | - | tig0023071:94484-94503 | Msa1404560:intergenic | 40.0% | |
| TCAATACGAGGATGAGTTAG+TGG | - | tig0023071:94590-94609 | Msa1404560:intergenic | 40.0% | |
| CTAACTCATCCTCGTATTGA+AGG | + | tig0023071:94590-94609 | Msa1404560:intron | 40.0% | |
| GAGGAATTTGGATATGACGA+TGG | + | tig0023071:94728-94747 | Msa1404560:CDS | 40.0% | |
| ! | CGATGGGTTCAACTACAATA+AGG | + | tig0023071:94745-94764 | Msa1404560:CDS | 40.0% |
| ! | ACTTTCTGGCACCTGATAGT+TGG | - | tig0023071:86682-86701 | Msa1404560:intergenic | 45.0% |
| ! | ACGGAGTTTGAGATGATCTG+AGG | - | tig0023071:86779-86798 | Msa1404560:intergenic | 45.0% |
| GTTGTCCGGGATTGAATCAT+TGG | - | tig0023071:86821-86840 | Msa1404560:intergenic | 45.0% | |
| TCCACGAAGATAAGGGTCAA+CGG | - | tig0023071:86872-86891 | Msa1404560:intergenic | 45.0% | |
| AGAATCACTGGTACCTCAGA+AGG | + | tig0023071:86892-86911 | Msa1404560:CDS | 45.0% | |
| TGTAAGGGTGATCAGATCGA+AGG | + | tig0023071:87048-87067 | Msa1404560:CDS | 45.0% | |
| CACTTAATTGCAGGAGTTCC+GGG | + | tig0023071:87421-87440 | Msa1404560:intron | 45.0% | |
| ACTTAATTGCAGGAGTTCCG+GGG | + | tig0023071:87422-87441 | Msa1404560:intron | 45.0% | |
| TTGCTAAGATCCGAGGATGT+AGG | + | tig0023071:87548-87567 | Msa1404560:CDS | 45.0% | |
| TGCTAAGATCCGAGGATGTA+GGG | + | tig0023071:87549-87568 | Msa1404560:CDS | 45.0% | |
| !! | CAGTACTGGCTCTGATGATA+AGG | + | tig0023071:87579-87598 | Msa1404560:CDS | 45.0% |
| GCACATCCATAGTTTGACAG+AGG | + | tig0023071:87921-87940 | Msa1404560:intron | 45.0% | |
| AGGACTATGTGGAAGACTTG+TGG | - | tig0023071:88131-88150 | Msa1404560:intergenic | 45.0% | |
| CTAAATGGTCCAACCCATCA+CGG | - | tig0023071:88449-88468 | Msa1404560:intergenic | 45.0% | |
| GGTGAAAACCTAGAGCTAGA+CGG | + | tig0023071:88554-88573 | Msa1404560:intron | 45.0% | |
| AAGCAAGCAAGCCTCACAAA+AGG | - | tig0023071:88960-88979 | Msa1404560:intergenic | 45.0% | |
| ! | TCGAAGGGAATGGGGTTTTA+TGG | - | tig0023071:89064-89083 | Msa1404560:intergenic | 45.0% |
| TGACACAGATCGAAGGGAAT+GGG | - | tig0023071:89073-89092 | Msa1404560:intergenic | 45.0% | |
| TTGACACAGATCGAAGGGAA+TGG | - | tig0023071:89074-89093 | Msa1404560:intergenic | 45.0% | |
| ! | GATAACCATTTTGCCTGGGT+TGG | - | tig0023071:89162-89181 | Msa1404560:intergenic | 45.0% |
| TGTTTGGTTACATGACCCGA+CGG | - | tig0023071:89211-89230 | Msa1404560:intergenic | 45.0% | |
| GGGTCATGTAACCAAACAAC+CGG | + | tig0023071:89213-89232 | Msa1404560:intron | 45.0% | |
| GGTCATGTAACCAAACAACC+GGG | + | tig0023071:89214-89233 | Msa1404560:intron | 45.0% | |
| TCTTGGTCGATGTGTCAATG+AGG | + | tig0023071:89525-89544 | Msa1404560:intron | 45.0% | |
| GTCCGTCACTCACATAACAA+AGG | - | tig0023071:91819-91838 | Msa1404560:intergenic | 45.0% | |
| !! | ACGTGATGGACATACCCTAT+CGG | + | tig0023071:91989-92008 | Msa1404560:intron | 45.0% |
| TCATCCAAGTGGGAGATTGT+TGG | + | tig0023071:93874-93893 | Msa1404560:intron | 45.0% | |
| CTAAATGGTCCAACCCATCA+CGG | - | tig0023071:88449-88468 | Msa1404560:intergenic | 45.0% | |
| GGTGAAAACCTAGAGCTAGA+CGG | + | tig0023071:88554-88573 | Msa1404560:intron | 45.0% | |
| TCCTATCAGTGCAGATAGCA+GGG | + | tig0023071:94371-94390 | Msa1404560:intron | 45.0% | |
| ! | GTAAATCAGGTCCACCGATT+TGG | + | tig0023071:94489-94508 | Msa1404560:intron | 45.0% |
| TGATGTACAAGCCAAATCGG+TGG | - | tig0023071:94503-94522 | Msa1404560:intergenic | 45.0% | |
| !! | ATAAAATATAAGATTTATTA+GGG | - | tig0023071:87249-87268 | Msa1404560:intergenic | 5.0% |
| !! | TATAAAATATAAGATTTATT+AGG | - | tig0023071:87250-87269 | Msa1404560:intergenic | 5.0% |
| !!! | AATCTTATATTTTATAAAAA+AGG | + | tig0023071:87254-87273 | Msa1404560:intron | 5.0% |
| !! | ATTATTTAATTAATCAATTA+TGG | + | tig0023071:88310-88329 | Msa1404560:intron | 5.0% |
| !!! | ATAATACATAATAATATTTT+TGG | - | tig0023071:89361-89380 | Msa1404560:intergenic | 5.0% |
| !!! | ATTTTATATATTATTATTTG+GGG | + | tig0023071:89432-89451 | Msa1404560:intron | 5.0% |
| !!! | TTGTAAATATTATATTATTT+TGG | + | tig0023071:89570-89589 | Msa1404560:intron | 5.0% |
| !! | TATATTATATTCAATATATT+TGG | - | tig0023071:90176-90195 | Msa1404560:intergenic | 5.0% |
| !! | ATTATTTAATTAATCAATTA+TGG | + | tig0023071:88310-88329 | Msa1404560:intron | 5.0% |
| TTCAATCCCGGACAACCATC+TGG | + | tig0023071:86825-86844 | Msa1404560:CDS | 50.0% | |
| TCAACTGCCAGATGGTTGTC+CGG | - | tig0023071:86835-86854 | Msa1404560:intergenic | 50.0% | |
| GATAAGGGTCAACGGAGAGA+AGG | - | tig0023071:86864-86883 | Msa1404560:intergenic | 50.0% | |
| TCCGTTGACCCTTATCTTCG+TGG | + | tig0023071:86868-86887 | Msa1404560:CDS | 50.0% | |
| GTACTAGCAGATCCAAAGCC+AGG | + | tig0023071:87469-87488 | Msa1404560:CDS | 50.0% | |
| ! | GGTGCTGTCGGTATAAATGC+TGG | + | tig0023071:87520-87539 | Msa1404560:CDS | 50.0% |
| ATCCTCGGATCTTAGCAAGC+TGG | - | tig0023071:87546-87565 | Msa1404560:intergenic | 50.0% | |
| ATCCGAGGATGTAGGGTCAT+CGG | + | tig0023071:87556-87575 | Msa1404560:CDS | 50.0% | |
| TACTTCACCCTTGCATCGCA+CGG | - | tig0023071:87656-87675 | Msa1404560:intergenic | 50.0% | |
| TGTGGAAGACTTGTGGCTGA+AGG | - | tig0023071:88124-88143 | Msa1404560:intergenic | 50.0% | |
| !! | CTAAATGGACCGTGATGGGT+TGG | + | tig0023071:88437-88456 | Msa1404560:intron | 50.0% |
| ACCTAGAGCTAGACGGAATG+AGG | + | tig0023071:88561-88580 | Msa1404560:intron | 50.0% | |
| CCTAGAGCTAGACGGAATGA+GGG | + | tig0023071:88562-88581 | Msa1404560:intron | 50.0% | |
| CAACGCCGACAACTATGAGA+GGG | - | tig0023071:88595-88614 | Msa1404560:intergenic | 50.0% | |
| ACAACGCCGACAACTATGAG+AGG | - | tig0023071:88596-88615 | Msa1404560:intergenic | 50.0% | |
| GACACAGATCGAAGGGAATG+GGG | - | tig0023071:89072-89091 | Msa1404560:intergenic | 50.0% | |
| AAGCATAACGATCCCAACCC+AGG | + | tig0023071:89146-89165 | Msa1404560:intron | 50.0% | |
| ! | GGCGGATAACCATTTTGCCT+GGG | - | tig0023071:89166-89185 | Msa1404560:intergenic | 50.0% |
| GTTTGGTTACATGACCCGAC+GGG | - | tig0023071:89210-89229 | Msa1404560:intergenic | 50.0% | |
| ACGGGTTTAACCCGGTTGTT+TGG | - | tig0023071:89227-89246 | Msa1404560:intergenic | 50.0% | |
| !! | GAGTGACGGACATACCCTAT+CGG | + | tig0023071:91828-91847 | Msa1404560:intron | 50.0% |
| !! | CTAAATGGACCGTGATGGGT+TGG | + | tig0023071:88437-88456 | Msa1404560:intron | 50.0% |
| ACCTAGAGCTAGACGGAATG+AGG | + | tig0023071:88561-88580 | Msa1404560:intron | 50.0% | |
| CCTAGAGCTAGACGGAATGA+GGG | + | tig0023071:88562-88581 | Msa1404560:intron | 50.0% | |
| CAACGCCGACAACTATGAGA+GGG | - | tig0023071:88595-88614 | Msa1404560:intergenic | 50.0% | |
| ACAACGCCGACAACTATGAG+AGG | - | tig0023071:88596-88615 | Msa1404560:intergenic | 50.0% | |
| CTCCTATCAGTGCAGATAGC+AGG | + | tig0023071:94370-94389 | Msa1404560:intron | 50.0% | |
| CCTATCAGTGCAGATAGCAG+GGG | + | tig0023071:94372-94391 | Msa1404560:intron | 50.0% | |
| CAACTGCCAGATGGTTGTCC+GGG | - | tig0023071:86834-86853 | Msa1404560:intergenic | 55.0% | |
| GGAGAGTCTCAACTGCCAGA+TGG | - | tig0023071:86843-86862 | Msa1404560:intergenic | 55.0% | |
| AGTTCCGGGGTTTGCAGCAT+GGG | + | tig0023071:87435-87454 | Msa1404560:CDS | 55.0% | |
| TGCAGCATGGGTGGGAATAG+AGG | + | tig0023071:87447-87466 | Msa1404560:CDS | 55.0% | |
| !! | TCTGCTGCATCTGGTGCTGT+CGG | + | tig0023071:87508-87527 | Msa1404560:CDS | 55.0% |
| TGCCGATGACCCTACATCCT+CGG | - | tig0023071:87561-87580 | Msa1404560:intergenic | 55.0% | |
| TGTAGGGTCATCGGCAGTAC+TGG | + | tig0023071:87565-87584 | Msa1404560:CDS | 55.0% | |
| ACTTCACCCTTGCATCGCAC+GGG | - | tig0023071:87655-87674 | Msa1404560:intergenic | 55.0% | |
| TAGCTAAACGGCTGAGGGCA+GGG | - | tig0023071:88490-88509 | Msa1404560:intergenic | 55.0% | |
| ATAGCTAAACGGCTGAGGGC+AGG | - | tig0023071:88491-88510 | Msa1404560:intergenic | 55.0% | |
| !! | CCCTCATTCCGTCTAGCTCT+AGG | - | tig0023071:88565-88584 | Msa1404560:intergenic | 55.0% |
| CGATCCCAACCCAGGCAAAA+TGG | + | tig0023071:89154-89173 | Msa1404560:intron | 55.0% | |
| ! | CGGCGGATAACCATTTTGCC+TGG | - | tig0023071:89167-89186 | Msa1404560:intergenic | 55.0% |
| CATTCAATATACGGCGGCGG+CGG | - | tig0023071:89184-89203 | Msa1404560:intergenic | 55.0% | |
| GATGAACGTCACACTCTGCG+AGG | + | tig0023071:90848-90867 | Msa1404560:intron | 55.0% | |
| TAGCTAAACGGCTGAGGGCA+GGG | - | tig0023071:88490-88509 | Msa1404560:intergenic | 55.0% | |
| ATAGCTAAACGGCTGAGGGC+AGG | - | tig0023071:88491-88510 | Msa1404560:intergenic | 55.0% | |
| !! | CCCTCATTCCGTCTAGCTCT+AGG | - | tig0023071:88565-88584 | Msa1404560:intergenic | 55.0% |
| ! | CCCCTGCTATCTGCACTGAT+AGG | - | tig0023071:94375-94394 | Msa1404560:intergenic | 55.0% |
| GAGTTCCGGGGTTTGCAGCA+TGG | + | tig0023071:87434-87453 | Msa1404560:CDS | 60.0% | |
| !! | GGCCAGCTTGCTAAGATCCG+AGG | + | tig0023071:87541-87560 | Msa1404560:CDS | 60.0% |
| TCATGGACCCGTGCGATGCA+AGG | + | tig0023071:87645-87664 | Msa1404560:intron | 60.0% | |
| CATGGACCCGTGCGATGCAA+GGG | + | tig0023071:87646-87665 | Msa1404560:intron | 60.0% | |
| GAGGGCAGGGACCTCTCATT+GGG | - | tig0023071:88477-88496 | Msa1404560:intergenic | 60.0% | |
| TGAGGGCAGGGACCTCTCAT+TGG | - | tig0023071:88478-88497 | Msa1404560:intergenic | 60.0% | |
| GAGGGCAGGGACCTCTCATT+GGG | - | tig0023071:88477-88496 | Msa1404560:intergenic | 60.0% | |
| TGAGGGCAGGGACCTCTCAT+TGG | - | tig0023071:88478-88497 | Msa1404560:intergenic | 60.0% | |
| TCCGGGGTTTGCAGCATGGG+TGG | + | tig0023071:87438-87457 | Msa1404560:CDS | 65.0% | |
| CCCACCCATGCTGCAAACCC+CGG | - | tig0023071:87442-87461 | Msa1404560:intergenic | 65.0% | |
| CCGGGGTTTGCAGCATGGGT+GGG | + | tig0023071:87439-87458 | Msa1404560:CDS | 65.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| tig0023071 | gene | 86553 | 94800 | 86553 | ID=Msa1404560;Name=Msa1404560 |
| tig0023071 | mRNA | 86553 | 94800 | 86553 | ID=Msa1404560-mRNA-1;Parent=Msa1404560;Name=Msa1404560-mRNA-1;_AED=0.00;_eAED=0.00;_QI=159|1|1|1|1|1|4|1|223 |
| tig0023071 | exon | 86553 | 86945 | 86553 | ID=Msa1404560-mRNA-1:exon:23676;Parent=Msa1404560-mRNA-1 |
| tig0023071 | exon | 87028 | 87211 | 87028 | ID=Msa1404560-mRNA-1:exon:23677;Parent=Msa1404560-mRNA-1 |
| tig0023071 | exon | 87434 | 87600 | 87434 | ID=Msa1404560-mRNA-1:exon:23678;Parent=Msa1404560-mRNA-1 |
| tig0023071 | exon | 94713 | 94800 | 94713 | ID=Msa1404560-mRNA-1:exon:23679;Parent=Msa1404560-mRNA-1 |
| tig0023071 | five_prime_UTR | 86553 | 86711 | 86553 | ID=Msa1404560-mRNA-1:five_prime_utr;Parent=Msa1404560-mRNA-1 |
| tig0023071 | CDS | 86712 | 86945 | 86712 | ID=Msa1404560-mRNA-1:cds;Parent=Msa1404560-mRNA-1 |
| tig0023071 | CDS | 87028 | 87211 | 87028 | ID=Msa1404560-mRNA-1:cds;Parent=Msa1404560-mRNA-1 |
| tig0023071 | CDS | 87434 | 87600 | 87434 | ID=Msa1404560-mRNA-1:cds;Parent=Msa1404560-mRNA-1 |
| tig0023071 | CDS | 94713 | 94799 | 94713 | ID=Msa1404560-mRNA-1:cds;Parent=Msa1404560-mRNA-1 |
| tig0023071 | three_prime_UTR | 94800 | 94800 | 94800 | ID=Msa1404560-mRNA-1:three_prime_utr;Parent=Msa1404560-mRNA-1 |
| Gene Sequence |
| Protein sequence |
