Alfalfa Gene Editing Database
Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
Msa0650190 | XP_024638446.1 | 95.410 | 305 | 10 | 1 | 1 | 301 | 1 | 305 | 0.0 | 590 |
Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|
Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|
Gene ID | Type | Classification |
---|
Gene ID | Type | Classification |
---|
Co-expression Network
Gene1 | Gene2 | correlation coefficient | p_value | FDR |
---|---|---|---|---|
Msa0013050 | Msa0650190 | -0.802287 | 6.027514e-49 | -8.615850e-47 |
Msa0014800 | Msa0650190 | 0.812256 | 4.646273e-51 | -8.615850e-47 |
Msa0023000 | Msa0650190 | 0.819218 | 1.303395e-52 | -8.615850e-47 |
Msa0030380 | Msa0650190 | 0.801652 | 8.137823e-49 | -8.615850e-47 |
Msa0065950 | Msa0650190 | 0.834529 | 2.843947e-56 | -8.615850e-47 |
Msa0071240 | Msa0650190 | 0.814044 | 1.882607e-51 | -8.615850e-47 |
Msa0084940 | Msa0650190 | 0.809905 | 1.501775e-50 | -8.615850e-47 |
Msa0091570 | Msa0650190 | 0.824629 | 7.275958e-54 | -8.615850e-47 |
Msa0092990 | Msa0650190 | 0.806885 | 6.619214e-50 | -8.615850e-47 |
Msa0095010 | Msa0650190 | 0.815096 | 1.101231e-51 | -8.615850e-47 |
Msa0095380 | Msa0650190 | 0.822524 | 2.262072e-53 | -8.615850e-47 |
Msa0096980 | Msa0650190 | 0.815218 | 1.034764e-51 | -8.615850e-47 |
Msa0105700 | Msa0650190 | 0.807755 | 4.327943e-50 | -8.615850e-47 |
Msa0115270 | Msa0650190 | 0.807090 | 5.990400e-50 | -8.615850e-47 |
Msa0115390 | Msa0650190 | 0.810569 | 1.080027e-50 | -8.615850e-47 |
Msa0118780 | Msa0650190 | 0.808816 | 2.571765e-50 | -8.615850e-47 |
Msa0119850 | Msa0650190 | 0.802213 | 6.242439e-49 | -8.615850e-47 |
Msa0120340 | Msa0650190 | 0.833398 | 5.458259e-56 | -8.615850e-47 |
Msa0607290 | Msa0650190 | -0.838164 | 3.384313e-57 | -8.615850e-47 |
Msa0607340 | Msa0650190 | -0.820309 | 7.340620e-53 | -8.615850e-47 |
Msa0609630 | Msa0650190 | 0.805920 | 1.057318e-49 | -8.615850e-47 |
Msa0618010 | Msa0650190 | 0.817446 | 3.284283e-52 | -8.615850e-47 |
Msa0623860 | Msa0650190 | 0.850186 | 1.998544e-60 | -8.615850e-47 |
Msa0625790 | Msa0650190 | 0.801767 | 7.710190e-49 | -8.615850e-47 |
Msa0626030 | Msa0650190 | 0.831239 | 1.868345e-55 | -8.615850e-47 |
Msa0627910 | Msa0650190 | 0.813416 | 2.588075e-51 | -8.615850e-47 |
Msa0647450 | Msa0650190 | -0.847196 | 1.347195e-59 | -8.615850e-47 |
Msa0650190 | Msa0663900 | 0.801431 | 9.031705e-49 | -8.615850e-47 |
Msa0650190 | Msa0663920 | 0.807027 | 6.175953e-50 | -8.615850e-47 |
Msa0650190 | Msa0669850 | 0.833614 | 4.819405e-56 | -8.615850e-47 |
Msa0650190 | Msa0670660 | 0.808071 | 3.707615e-50 | -8.615850e-47 |
Msa0650190 | Msa0670980 | 0.801801 | 7.587250e-49 | -8.615850e-47 |
Msa0650190 | Msa0673470 | 0.813432 | 2.567956e-51 | -8.615850e-47 |
Msa0650190 | Msa0684180 | -0.810115 | 1.353467e-50 | -8.615850e-47 |
Msa0650190 | Msa0692110 | 0.871324 | 7.454839e-67 | -8.615850e-47 |
Msa0650190 | Msa0692940 | 0.807128 | 5.880000e-50 | -8.615850e-47 |
Msa0650190 | Msa0711490 | 0.816291 | 5.966367e-52 | -8.615850e-47 |
Msa0650190 | Msa0712310 | 0.840372 | 9.046606e-58 | -8.615850e-47 |
Msa0650190 | Msa0713820 | 0.820914 | 5.331920e-53 | -8.615850e-47 |
Msa0650190 | Msa0722020 | 0.850816 | 1.329720e-60 | -8.615850e-47 |
Msa0650190 | Msa0726830 | 0.824439 | 8.067656e-54 | -8.615850e-47 |
Msa0650190 | Msa0734120 | 0.831228 | 1.880371e-55 | -8.615850e-47 |
Msa0650190 | Msa0743260 | 0.817194 | 3.742306e-52 | -8.615850e-47 |
Msa0650190 | Msa0747260 | 0.840431 | 8.729376e-58 | -8.615850e-47 |
Msa0650190 | Msa0751210 | 0.817312 | 3.520175e-52 | -8.615850e-47 |
Msa0650190 | Msa0752620 | 0.829732 | 4.365713e-55 | -8.615850e-47 |
Msa0650190 | Msa0755340 | 0.803784 | 2.954957e-49 | -8.615850e-47 |
Msa0650190 | Msa0756060 | 0.811255 | 7.670467e-51 | -8.615850e-47 |
Msa0650190 | Msa0756310 | 0.860277 | 2.310500e-63 | -8.615850e-47 |
Msa0650190 | Msa0756550 | 0.833349 | 5.614093e-56 | -8.615850e-47 |
Msa0650190 | Msa0763020 | 0.844183 | 8.849659e-59 | -8.615850e-47 |
Msa0650190 | Msa0763070 | 0.841678 | 4.106862e-58 | -8.615850e-47 |
Msa0650190 | Msa0765380 | 0.811351 | 7.312158e-51 | -8.615850e-47 |
Msa0650190 | Msa0766310 | 0.802437 | 5.611972e-49 | -8.615850e-47 |
Msa0650190 | Msa0769980 | 0.818289 | 2.118330e-52 | -8.615850e-47 |
Msa0650190 | Msa0771720 | 0.828175 | 1.040618e-54 | -8.615850e-47 |
Msa0650190 | Msa0775260 | 0.838322 | 3.080273e-57 | -8.615850e-47 |
Msa0650190 | Msa0784860 | 0.826880 | 2.127863e-54 | -8.615850e-47 |
Msa0650190 | Msa0785570 | 0.806709 | 7.209902e-50 | -8.615850e-47 |
Msa0650190 | Msa0787750 | 0.816158 | 6.389039e-52 | -8.615850e-47 |
Msa0650190 | Msa0792090 | 0.858057 | 1.069860e-62 | -8.615850e-47 |
Msa0650190 | Msa0794320 | 0.815899 | 7.298737e-52 | -8.615850e-47 |
Msa0650190 | Msa0795010 | 0.818427 | 1.971304e-52 | -8.615850e-47 |
Msa0650190 | Msa0795030 | 0.835214 | 1.911389e-56 | -8.615850e-47 |
Msa0650190 | Msa0797120 | 0.802613 | 5.162047e-49 | -8.615850e-47 |
Msa0650190 | Msa0801110 | 0.812541 | 4.024384e-51 | -8.615850e-47 |
Msa0650190 | Msa0805500 | 0.827385 | 1.611115e-54 | -8.615850e-47 |
Msa0650190 | Msa0813720 | 0.801547 | 8.552948e-49 | -8.615850e-47 |
Msa0650190 | Msa0830990 | 0.844116 | 9.225452e-59 | -8.615850e-47 |
Msa0650190 | Msa0831590 | 0.810113 | 1.354603e-50 | -8.615850e-47 |
Msa0650190 | Msa0833310 | 0.832969 | 6.978033e-56 | -8.615850e-47 |
Msa0650190 | Msa0835280 | 0.852052 | 5.946099e-61 | -8.615850e-47 |
Msa0650190 | Msa0835730 | 0.848628 | 5.428489e-60 | -8.615850e-47 |
Msa0650190 | Msa0835820 | 0.823213 | 1.563668e-53 | -8.615850e-47 |
Msa0650190 | Msa0847080 | 0.814736 | 1.323741e-51 | -8.615850e-47 |
Msa0650190 | Msa0852730 | 0.802491 | 5.471511e-49 | -8.615850e-47 |
Msa0650190 | Msa0853170 | 0.821320 | 4.299771e-53 | -8.615850e-47 |
Msa0650190 | Msa0855430 | 0.807821 | 4.192341e-50 | -8.615850e-47 |
Msa0650190 | Msa0863870 | 0.811900 | 5.555903e-51 | -8.615850e-47 |
Msa0650190 | Msa0869120 | 0.813119 | 3.007727e-51 | -8.615850e-47 |
Msa0650190 | Msa0874500 | 0.810515 | 1.109344e-50 | -8.615850e-47 |
Msa0650190 | Msa0877410 | 0.811708 | 6.116037e-51 | -8.615850e-47 |
Msa0650190 | Msa0899230 | 0.813853 | 2.074355e-51 | -8.615850e-47 |
Msa0650190 | Msa0900630 | 0.835282 | 1.837801e-56 | -8.615850e-47 |
Msa0650190 | Msa0926460 | 0.841083 | 5.892253e-58 | -8.615850e-47 |
Msa0650190 | Msa0927670 | 0.806802 | 6.891584e-50 | -8.615850e-47 |
Msa0650190 | Msa0930140 | 0.800895 | 1.162826e-48 | -8.615850e-47 |
Msa0650190 | Msa0930460 | -0.808644 | 2.798238e-50 | -8.615850e-47 |
Msa0650190 | Msa0933290 | 0.812648 | 3.814717e-51 | -8.615850e-47 |
Msa0650190 | Msa0960160 | 0.809867 | 1.530366e-50 | -8.615850e-47 |
Msa0650190 | Msa0965860 | 0.841354 | 5.000603e-58 | -8.615850e-47 |
Msa0650190 | Msa0974810 | 0.815545 | 8.750360e-52 | -8.615850e-47 |
Msa0650190 | Msa0992490 | -0.822124 | 2.801023e-53 | -8.615850e-47 |
Msa0650190 | Msa0999050 | -0.817588 | 3.050579e-52 | -8.615850e-47 |
Msa0650190 | Msa1000690 | 0.827935 | 1.188620e-54 | -8.615850e-47 |
Msa0650190 | Msa1012830 | 0.800300 | 1.537360e-48 | -8.615850e-47 |
Msa0650190 | Msa1015060 | 0.808629 | 2.819116e-50 | -8.615850e-47 |
Msa0650190 | Msa1023180 | 0.829914 | 3.942319e-55 | -8.615850e-47 |
Msa0650190 | Msa1026760 | 0.820570 | 6.396143e-53 | -8.615850e-47 |
Msa0650190 | Msa1026790 | 0.813461 | 2.530495e-51 | -8.615850e-47 |
Msa0650190 | Msa1039880 | 0.811658 | 6.270167e-51 | -8.615850e-47 |
Msa0650190 | Msa1043050 | 0.831884 | 1.295994e-55 | -8.615850e-47 |
Msa0650190 | Msa1047400 | 0.825346 | 4.929326e-54 | -8.615850e-47 |
Msa0650190 | Msa1060220 | 0.811795 | 5.855605e-51 | -8.615850e-47 |
Msa0650190 | Msa1072460 | -0.814636 | 1.393035e-51 | -8.615850e-47 |
Msa0650190 | Msa1092820 | 0.807154 | 5.804663e-50 | -8.615850e-47 |
Msa0650190 | Msa1109570 | 0.817828 | 2.692609e-52 | -8.615850e-47 |
Msa0650190 | Msa1116690 | 0.838648 | 2.537561e-57 | -8.615850e-47 |
Msa0650190 | Msa1126120 | -0.828958 | 6.729605e-55 | -8.615850e-47 |
Msa0650190 | Msa1136540 | 0.800076 | 1.707996e-48 | -8.615850e-47 |
Msa0650190 | Msa1143840 | 0.809399 | 1.928813e-50 | -8.615850e-47 |
Msa0650190 | Msa1143930 | -0.828452 | 8.920931e-55 | -8.615850e-47 |
Msa0650190 | Msa1150710 | 0.822219 | 2.663231e-53 | -8.615850e-47 |
Msa0650190 | Msa1151710 | 0.808318 | 3.285630e-50 | -8.615850e-47 |
Msa0650190 | Msa1171870 | 0.827151 | 1.832463e-54 | -8.615850e-47 |
Msa0650190 | Msa1172230 | 0.819009 | 1.454063e-52 | -8.615850e-47 |
Msa0650190 | Msa1175330 | 0.843464 | 1.378612e-58 | -8.615850e-47 |
Msa0650190 | Msa1183660 | 0.804074 | 2.572243e-49 | -8.615850e-47 |
Msa0650190 | Msa1190930 | 0.800121 | 1.672302e-48 | -8.615850e-47 |
Msa0650190 | Msa1199220 | 0.806140 | 9.505282e-50 | -8.615850e-47 |
Msa0650190 | Msa1204250 | 0.813934 | 1.990827e-51 | -8.615850e-47 |
Msa0650190 | Msa1217430 | -0.828793 | 7.377802e-55 | -8.615850e-47 |
Msa0650190 | Msa1217830 | 0.830623 | 2.645748e-55 | -8.615850e-47 |
Msa0650190 | Msa1219430 | 0.801809 | 7.555695e-49 | -8.615850e-47 |
Msa0650190 | Msa1235630 | 0.837632 | 4.634482e-57 | -8.615850e-47 |
Msa0650190 | Msa1247250 | 0.801412 | 9.114071e-49 | -8.615850e-47 |
Msa0650190 | Msa1259400 | 0.819042 | 1.429063e-52 | -8.615850e-47 |
Msa0650190 | Msa1267260 | 0.873278 | 1.663645e-67 | -8.615850e-47 |
Msa0650190 | Msa1269300 | 0.803173 | 3.954884e-49 | -8.615850e-47 |
Msa0650190 | Msa1275360 | 0.806659 | 7.388703e-50 | -8.615850e-47 |
Msa0650190 | Msa1277280 | 0.848472 | 5.996921e-60 | -8.615850e-47 |
Msa0650190 | Msa1290190 | 0.800504 | 1.397202e-48 | -8.615850e-47 |
Msa0650190 | Msa1300050 | 0.806570 | 7.714645e-50 | -8.615850e-47 |
Msa0650190 | Msa1300350 | -0.812289 | 4.568736e-51 | -8.615850e-47 |
Msa0650190 | Msa1302190 | -0.832545 | 8.892286e-56 | -8.615850e-47 |
Msa0650190 | Msa1303160 | 0.811962 | 5.384609e-51 | -8.615850e-47 |
Msa0650190 | Msa1306430 | 0.825311 | 5.022089e-54 | -8.615850e-47 |
Msa0650190 | Msa1315870 | 0.852231 | 5.288256e-61 | -8.615850e-47 |
Msa0650190 | Msa1333110 | 0.817083 | 3.963807e-52 | -8.615850e-47 |
Msa0650190 | Msa1335560 | 0.800336 | 1.512145e-48 | -8.615850e-47 |
Msa0650190 | Msa1343360 | 0.800380 | 1.480789e-48 | -8.615850e-47 |
Msa0650190 | Msa1348600 | 0.801884 | 7.294825e-49 | -8.615850e-47 |
Msa0650190 | Msa1348950 | 0.825994 | 3.460694e-54 | -8.615850e-47 |
Msa0650190 | Msa1359650 | -0.803955 | 2.722253e-49 | -8.615850e-47 |
Msa0650190 | Msa1368210 | 0.814361 | 1.602066e-51 | -8.615850e-47 |
Msa0650190 | Msa1369530 | 0.809543 | 1.796054e-50 | -8.615850e-47 |
Msa0650190 | Msa1370340 | 0.801877 | 7.316583e-49 | -8.615850e-47 |
Msa0650190 | Msa1382410 | 0.832191 | 1.087956e-55 | -8.615850e-47 |
Msa0650190 | Msa1393740 | 0.811313 | 7.451616e-51 | -8.615850e-47 |
Msa0650190 | Msa1397940 | 0.815202 | 1.043309e-51 | -8.615850e-47 |
Msa0650190 | Msa1403580 | -0.803918 | 2.771924e-49 | -8.615850e-47 |
Msa0650190 | Msa1403800 | 0.835580 | 1.544525e-56 | -8.615850e-47 |
Msa0650190 | Msa1404010 | 0.803996 | 2.669454e-49 | -8.615850e-47 |
Msa0650190 | Msa1404560 | 0.805489 | 1.302117e-49 | -8.615850e-47 |
Msa0650190 | Msa1416390 | 0.807151 | 5.815367e-50 | -8.615850e-47 |
Msa0650190 | Msa1420990 | 0.802683 | 4.993089e-49 | -8.615850e-47 |
Msa0650190 | Msa1423910 | 0.814513 | 1.482519e-51 | -8.615850e-47 |
Msa0650190 | Msa1441190 | 0.823108 | 1.654039e-53 | -8.615850e-47 |
Msa0650190 | Msa1443290 | -0.802204 | 6.269706e-49 | -8.615850e-47 |
Msa0650190 | Msa1446250 | 0.801532 | 8.612261e-49 | -8.615850e-47 |
Msa0650190 | Msa1448620 | 0.810688 | 1.017754e-50 | -8.615850e-47 |
Msa0650190 | Msa1448630 | 0.839883 | 1.214003e-57 | -8.615850e-47 |
Msa0650190 | Msa1451550 | 0.804811 | 1.805847e-49 | -8.615850e-47 |
Msa0650190 | Msa1452470 | 0.832757 | 7.879771e-56 | -8.615850e-47 |
Msa0650190 | Msa1452570 | 0.805642 | 1.209697e-49 | -8.615850e-47 |
Msa0650190 | Msa1465960 | 0.842327 | 2.767098e-58 | -8.615850e-47 |
Msa0136390 | Msa0650190 | 0.807199 | 5.681215e-50 | -8.615850e-47 |
Msa0137820 | Msa0650190 | 0.813391 | 2.620779e-51 | -8.615850e-47 |
Msa0140110 | Msa0650190 | 0.807870 | 4.092341e-50 | -8.615850e-47 |
Msa0143080 | Msa0650190 | 0.854356 | 1.299896e-61 | -8.615850e-47 |
Msa0145010 | Msa0650190 | 0.814066 | 1.861793e-51 | -8.615850e-47 |
Msa0152170 | Msa0650190 | 0.809240 | 2.086420e-50 | -8.615850e-47 |
Msa0162770 | Msa0650190 | -0.846335 | 2.317179e-59 | -8.615850e-47 |
Msa0173740 | Msa0650190 | 0.802786 | 4.755902e-49 | -8.615850e-47 |
Msa0175200 | Msa0650190 | 0.816419 | 5.584300e-52 | -8.615850e-47 |
Msa0178990 | Msa0650190 | 0.822103 | 2.833222e-53 | -8.615850e-47 |
Msa0187060 | Msa0650190 | 0.804245 | 2.369554e-49 | -8.615850e-47 |
Msa0194480 | Msa0650190 | 0.823564 | 1.294276e-53 | -8.615850e-47 |
Msa0194970 | Msa0650190 | 0.840028 | 1.112929e-57 | -8.615850e-47 |
Msa0199690 | Msa0650190 | 0.806342 | 8.616662e-50 | -8.615850e-47 |
Msa0220440 | Msa0650190 | 0.835436 | 1.679507e-56 | -8.615850e-47 |
Msa0224730 | Msa0650190 | 0.810068 | 1.384933e-50 | -8.615850e-47 |
Msa0226890 | Msa0650190 | 0.820676 | 6.048085e-53 | -8.615850e-47 |
Msa0236270 | Msa0650190 | 0.800372 | 1.486307e-48 | -8.615850e-47 |
Msa0236980 | Msa0650190 | 0.868229 | 7.625533e-66 | -8.615850e-47 |
Msa0372340 | Msa0650190 | 0.812508 | 4.093529e-51 | -8.615850e-47 |
Msa0380040 | Msa0650190 | 0.818657 | 1.748259e-52 | -8.615850e-47 |
Msa0387750 | Msa0650190 | 0.809009 | 2.338295e-50 | -8.615850e-47 |
Msa0391690 | Msa0650190 | 0.801172 | 1.020654e-48 | -8.615850e-47 |
Msa0392070 | Msa0650190 | 0.801323 | 9.504912e-49 | -8.615850e-47 |
Msa0405370 | Msa0650190 | 0.809051 | 2.290559e-50 | -8.615850e-47 |
Msa0415430 | Msa0650190 | 0.808496 | 3.010358e-50 | -8.615850e-47 |
Msa0419640 | Msa0650190 | -0.817582 | 3.060976e-52 | -8.615850e-47 |
Msa0440130 | Msa0650190 | -0.801707 | 7.928907e-49 | -8.615850e-47 |
Msa0442200 | Msa0650190 | 0.826493 | 2.631493e-54 | -8.615850e-47 |
Msa0449820 | Msa0650190 | 0.805623 | 1.220792e-49 | -8.615850e-47 |
Msa0469850 | Msa0650190 | 0.824814 | 6.581216e-54 | -8.615850e-47 |
Msa0471590 | Msa0650190 | 0.803821 | 2.903549e-49 | -8.615850e-47 |
Msa0244270 | Msa0650190 | 0.812919 | 3.327604e-51 | -8.615850e-47 |
Msa0269450 | Msa0650190 | 0.804312 | 2.294911e-49 | -8.615850e-47 |
Msa0280430 | Msa0650190 | 0.801425 | 9.058475e-49 | -8.615850e-47 |
Msa0281360 | Msa0650190 | 0.807930 | 3.972958e-50 | -8.615850e-47 |
Msa0284820 | Msa0650190 | 0.805722 | 1.163466e-49 | -8.615850e-47 |
Msa0298700 | Msa0650190 | 0.817024 | 4.086849e-52 | -8.615850e-47 |
Msa0299580 | Msa0650190 | 0.803422 | 3.511938e-49 | -8.615850e-47 |
Msa0307830 | Msa0650190 | -0.800584 | 1.345846e-48 | -8.615850e-47 |
Msa0314460 | Msa0650190 | 0.818779 | 1.640603e-52 | -8.615850e-47 |
Msa0328210 | Msa0650190 | 0.842984 | 1.851112e-58 | -8.615850e-47 |
Msa0337060 | Msa0650190 | 0.808752 | 2.653326e-50 | -8.615850e-47 |
Msa0342100 | Msa0650190 | 0.810184 | 1.307356e-50 | -8.615850e-47 |
Msa0347680 | Msa0650190 | 0.804141 | 2.491195e-49 | -8.615850e-47 |
Msa0485850 | Msa0650190 | 0.819643 | 1.042684e-52 | -8.615850e-47 |
Msa0488270 | Msa0650190 | 0.827936 | 1.188104e-54 | -8.615850e-47 |
Msa0493920 | Msa0650190 | 0.803303 | 3.718194e-49 | -8.615850e-47 |
Msa0500720 | Msa0650190 | 0.805520 | 1.283247e-49 | -8.615850e-47 |
Msa0505060 | Msa0650190 | 0.820124 | 8.095261e-53 | -8.615850e-47 |
Msa0519220 | Msa0650190 | 0.807445 | 5.036352e-50 | -8.615850e-47 |
Msa0524600 | Msa0650190 | 0.802972 | 4.353190e-49 | -8.615850e-47 |
Msa0534410 | Msa0650190 | 0.820510 | 6.602120e-53 | -8.615850e-47 |
Msa0534900 | Msa0650190 | 0.818877 | 1.558327e-52 | -8.615850e-47 |
Msa0535030 | Msa0650190 | 0.817099 | 3.931109e-52 | -8.615850e-47 |
Msa0535060 | Msa0650190 | 0.817294 | 3.553065e-52 | -8.615850e-47 |
Msa0545080 | Msa0650190 | 0.802480 | 5.500441e-49 | -8.615850e-47 |
Msa0553220 | Msa0650190 | -0.845766 | 3.309854e-59 | -8.615850e-47 |
Msa0560470 | Msa0650190 | 0.802812 | 4.697338e-49 | -8.615850e-47 |
Msa0570330 | Msa0650190 | 0.806960 | 6.381005e-50 | -8.615850e-47 |
Msa0585900 | Msa0650190 | 0.813778 | 2.154596e-51 | -8.615850e-47 |
Msa0588240 | Msa0650190 | 0.810537 | 1.097510e-50 | -8.615850e-47 |
Msa0590650 | Msa0650190 | 0.829489 | 5.003694e-55 | -8.615850e-47 |
Msa0590660 | Msa0650190 | 0.803677 | 3.110360e-49 | -8.615850e-47 |
Msa0590680 | Msa0650190 | 0.816341 | 5.812174e-52 | -8.615850e-47 |
Msa0591060 | Msa0650190 | 0.834537 | 2.830830e-56 | -8.615850e-47 |
Msa0591540 | Msa0650190 | 0.820616 | 6.241984e-53 | -8.615850e-47 |
Msa0591770 | Msa0650190 | 0.823656 | 1.231749e-53 | -8.615850e-47 |
Msa0599580 | Msa0650190 | 0.809639 | 1.712823e-50 | -8.615850e-47 |
PPI
Gene1 | Gene2 | Type |
---|
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
Msa0650190 | MtrunA17_Chr4g0042191 | 95.410 | 305 | 10 | 1 | 1 | 301 | 1 | 305 | 0.0 | 590 |
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
Msa0650190 | AT5G54540.1 | 34.472 | 322 | 165 | 10 | 1 | 301 | 1 | 297 | 3.40e-34 | 126 |
Find 107 sgRNAs with CRISPR-Local
Find 326 sgRNAs with CRISPR-GE
CRISPR-Local
sgRNA_sequence | on_target_score | Position | Region |
---|---|---|---|
ATGACAGCATTCCATATATT+TGG | 0.098347 | 4_3:+56981320 | None:intergenic |
ATCTTTGATCTTATCTCTTT+TGG | 0.151376 | 4_3:-56980439 | Msa0650190:three_prime_UTR |
AGGCTTCACGTCCGCGGTTT+TGG | 0.226260 | 4_3:+56982478 | None:intergenic |
GCGTCGCTAGGTCAGGCTTC+AGG | 0.268972 | 4_3:-56982583 | Msa0650190:CDS |
TAACTATTCCCAATATTATA+TGG | 0.271397 | 4_3:-56980576 | Msa0650190:three_prime_UTR |
GCCTCTGCACACGTCGGTTT+CGG | 0.293742 | 4_3:-56982459 | Msa0650190:CDS |
TTGCTTGTGACCCAAATATA+TGG | 0.322907 | 4_3:-56981331 | Msa0650190:CDS |
TTTCTTGAACGCATGGCTTT+GGG | 0.336909 | 4_3:-56980542 | Msa0650190:three_prime_UTR |
GCTAGCAACTGATTGGATAA+TGG | 0.370522 | 4_3:-56982651 | Msa0650190:exon |
GACGCCGATGCCGGCGAGCT+TGG | 0.375606 | 4_3:+56982601 | None:intergenic |
CGTCGCTAGGTCAGGCTTCA+GGG | 0.385353 | 4_3:-56982582 | Msa0650190:CDS |
TGACAGCATTCCATATATTT+GGG | 0.391615 | 4_3:+56981321 | None:intergenic |
TGCTGATGGAGGCAGTTTCA+TGG | 0.399854 | 4_3:-56980922 | Msa0650190:CDS |
TTTCATGGGATTGGCAGTTA+TGG | 0.406291 | 4_3:-56980874 | Msa0650190:CDS |
ATTGGCAGTTATGGTGATAA+TGG | 0.408540 | 4_3:-56980865 | Msa0650190:CDS |
CTAGCAACTGATTGGATAAT+GGG | 0.408637 | 4_3:-56982650 | Msa0650190:exon |
ATACTTTACCCGTTGATGTA+AGG | 0.408721 | 4_3:-56980498 | Msa0650190:three_prime_UTR |
AGCCTCAACAAGACAATCCT+TGG | 0.412702 | 4_3:+56981595 | None:intergenic |
TTCTTCGAATCACAGCTTGC+AGG | 0.414030 | 4_3:-56981275 | Msa0650190:intron |
GCAGCCAAGCTCGCCGGCAT+CGG | 0.414205 | 4_3:-56982605 | Msa0650190:CDS |
CAGCGAAGCTAGCAACTGAT+TGG | 0.414342 | 4_3:-56982658 | Msa0650190:five_prime_UTR |
ATTTGTCTTTCTCAACTGTT+GGG | 0.421154 | 4_3:+56980955 | None:intergenic |
GATTTGTCTTTCTCAACTGT+TGG | 0.425812 | 4_3:+56980954 | None:intergenic |
TGAGGCTATTTCAAATCCTT+CGG | 0.427999 | 4_3:-56981579 | Msa0650190:CDS |
GGCATCGGCGTCGCTAGGTC+AGG | 0.434066 | 4_3:-56982590 | Msa0650190:CDS |
GAAGCTGACAGTTACTGAAA+TGG | 0.440322 | 4_3:-56981012 | Msa0650190:CDS |
TTTCGGAGGATTTGAATGAC+TGG | 0.442439 | 4_3:-56982442 | Msa0650190:CDS |
GGGAGGAAGTTTCATGGGAT+TGG | 0.442750 | 4_3:-56980883 | Msa0650190:CDS |
ACATTGGCCCTTACATCAAC+GGG | 0.446350 | 4_3:+56980490 | None:intergenic |
GGTTCTGTCTCCTTCTCCCA+AGG | 0.446630 | 4_3:-56981612 | Msa0650190:CDS |
GCAACTGCAGATTCAACAAA+TGG | 0.455044 | 4_3:-56981140 | Msa0650190:intron |
TAGCTCAAGTGTTGAGGCCC+AGG | 0.460395 | 4_3:-56981522 | Msa0650190:intron |
TCGCCGGCATCGGCGTCGCT+AGG | 0.463408 | 4_3:-56982595 | Msa0650190:CDS |
TTAGGATAAAGAGCAAATAG+AGG | 0.467737 | 4_3:+56980414 | None:intergenic |
ACATTTCCTGACTGAGACTC+AGG | 0.469584 | 4_3:+56981065 | None:intergenic |
CCTACGCCGAGAATGGTGTT+TGG | 0.473022 | 4_3:-56982377 | Msa0650190:CDS |
CGAGACCACTGTTTCTCCGC+TGG | 0.479377 | 4_3:+56982542 | None:intergenic |
ATCTCATGGTAGTGAAGTCT+TGG | 0.480550 | 4_3:-56981633 | Msa0650190:CDS |
TCCCAAGGATTGTCTTGTTG+AGG | 0.484050 | 4_3:-56981597 | Msa0650190:CDS |
TCCTCCGCTTCCTTCAACGT+CGG | 0.485697 | 4_3:+56982347 | None:intergenic |
TATATTTGGGTCACAAGCAA+TGG | 0.494737 | 4_3:+56981334 | None:intergenic |
CAAAGATAAAATGTTCAGAT+TGG | 0.495605 | 4_3:+56980455 | None:intergenic |
TACTTTACCCGTTGATGTAA+GGG | 0.499567 | 4_3:-56980497 | Msa0650190:three_prime_UTR |
GGCTTTGGGAAAGTGTGGAT+TGG | 0.499673 | 4_3:-56980528 | Msa0650190:three_prime_UTR |
TTCTCAATTTGAGAATTAGC+AGG | 0.502174 | 4_3:+56981659 | None:intergenic |
TGTCGTGGGAGGAAGTTTCA+TGG | 0.507727 | 4_3:-56980889 | Msa0650190:CDS |
TGGAGAGCCTACGCCGAGAA+TGG | 0.509702 | 4_3:-56982384 | Msa0650190:CDS |
CAGCGGAGAAACAGTGGTCT+CGG | 0.510466 | 4_3:-56982541 | Msa0650190:CDS |
ACCTCTCCAAACACCATTCT+CGG | 0.512931 | 4_3:+56982371 | None:intergenic |
TGACCTAGCGACGCCGATGC+CGG | 0.514560 | 4_3:+56982592 | None:intergenic |
AAATCTTCAGCTGATGCTGA+TGG | 0.518948 | 4_3:-56980936 | Msa0650190:CDS |
GAAAAGCCTGAGTCTCAGTC+AGG | 0.524090 | 4_3:-56981071 | Msa0650190:CDS |
CATAAACAAATCACTTTCAT+CGG | 0.525463 | 4_3:+56982412 | None:intergenic |
AAGCAACTGAAAAGCATGAA+TGG | 0.528445 | 4_3:+56981544 | None:intergenic |
TTCGGAGGATTTGAATGACT+GGG | 0.534180 | 4_3:-56982441 | Msa0650190:CDS |
CACATTGGCCCTTACATCAA+CGG | 0.534331 | 4_3:+56980489 | None:intergenic |
GTTGCTTAGCTCAAGTGTTG+AGG | 0.535470 | 4_3:-56981528 | Msa0650190:CDS |
CGAGAGAAAACTCTTAAATG+TGG | 0.536644 | 4_3:+56980387 | None:intergenic |
CCCTCGTCGGCGATGAGGCG+CGG | 0.537738 | 4_3:+56982516 | None:intergenic |
AGGACGGCAGCCAAGCTCGC+CGG | 0.539761 | 4_3:-56982611 | Msa0650190:CDS |
GATTGGATAATGGGCGGTGG+CGG | 0.542192 | 4_3:-56982641 | Msa0650190:exon |
AAAGCATGAATGGCATGCTT+AGG | 0.548238 | 4_3:+56981554 | None:intergenic |
GCCTCAACAAGACAATCCTT+GGG | 0.548704 | 4_3:+56981596 | None:intergenic |
AGTGATTTGTTTATGTCGAG+TGG | 0.551557 | 4_3:-56982404 | Msa0650190:CDS |
GGTTCCGACGTTGAAGGAAG+CGG | 0.551831 | 4_3:-56982351 | Msa0650190:CDS |
TTTGAGAATTAGCAGGTGAA+AGG | 0.552733 | 4_3:+56981666 | None:intergenic |
GTCGTGGGAGGAAGTTTCAT+GGG | 0.556777 | 4_3:-56980888 | Msa0650190:CDS |
TAGGATAAAGAGCAAATAGA+GGG | 0.561174 | 4_3:+56980415 | None:intergenic |
CGCATGGCTTTGGGAAAGTG+TGG | 0.565506 | 4_3:-56980533 | Msa0650190:three_prime_UTR |
TCGAAGAAACTAGTCACTGC+AGG | 0.567121 | 4_3:+56981290 | None:intergenic |
ATGGATTATAAGAATGTCGT+GGG | 0.569424 | 4_3:-56980903 | Msa0650190:CDS |
GAAATGGAGTCTTCATGCAC+AGG | 0.574097 | 4_3:-56980650 | Msa0650190:three_prime_UTR |
CATGGATTATAAGAATGTCG+TGG | 0.578660 | 4_3:-56980904 | Msa0650190:CDS |
CAAATTGAGAACTCATCTCA+TGG | 0.582375 | 4_3:-56981647 | Msa0650190:CDS |
TGGAGAGGTTCCGACGTTGA+AGG | 0.586309 | 4_3:-56982357 | Msa0650190:CDS |
CGGTGGCGGAACGATGAGGA+CGG | 0.587249 | 4_3:-56982627 | Msa0650190:CDS |
GAAGGAAGCGGAGGAAGCCA+CGG | 0.589709 | 4_3:-56982339 | Msa0650190:CDS |
ACAAGACAATCCTTGGGAGA+AGG | 0.590276 | 4_3:+56981602 | None:intergenic |
ACCGCGCCTCATCGCCGACG+AGG | 0.591542 | 4_3:-56982517 | Msa0650190:CDS |
GTCGCTAGGTCAGGCTTCAG+GGG | 0.594901 | 4_3:-56982581 | Msa0650190:CDS |
TCTGCACACGTCGGTTTCGG+AGG | 0.596631 | 4_3:-56982456 | Msa0650190:CDS |
CGCGTGCTTCAATTCAGCCG+TGG | 0.599375 | 4_3:+56982322 | None:intergenic |
CCAAACACCATTCTCGGCGT+AGG | 0.600029 | 4_3:+56982377 | None:intergenic |
AAGGGCCAATGTGTTCGTCA+TGG | 0.603657 | 4_3:-56980479 | Msa0650190:three_prime_UTR |
CCGCGCCTCATCGCCGACGA+GGG | 0.606141 | 4_3:-56982516 | Msa0650190:intron |
GTGCAGAGGCTTCACGTCCG+CGG | 0.607881 | 4_3:+56982472 | None:intergenic |
TCCGAAACCGACGTGTGCAG+AGG | 0.608510 | 4_3:+56982458 | None:intergenic |
CGTATCCAGCGGAGAAACAG+TGG | 0.608528 | 4_3:-56982547 | Msa0650190:CDS |
GCCGAGAATGGTGTTTGGAG+AGG | 0.611441 | 4_3:-56982372 | Msa0650190:CDS |
TCTTCAGCTGATGCTGATGG+AGG | 0.613380 | 4_3:-56980933 | Msa0650190:CDS |
GTCAGGCTTCAGGGGAACCA+CGG | 0.616706 | 4_3:-56982573 | Msa0650190:CDS |
ACTGATTGGATAATGGGCGG+TGG | 0.623434 | 4_3:-56982644 | Msa0650190:exon |
CCCTGAGATAAAACCCTCGT+CGG | 0.630010 | 4_3:+56982503 | None:intergenic |
TGGGCGGTGGCGGAACGATG+AGG | 0.643041 | 4_3:-56982631 | Msa0650190:CDS |
ATGGCATGCTTAGGCACCGA+AGG | 0.649369 | 4_3:+56981563 | None:intergenic |
TTGGTCCATGACGAACACAT+TGG | 0.651624 | 4_3:+56980474 | None:intergenic |
TCCGACGTTGAAGGAAGCGG+AGG | 0.652735 | 4_3:-56982348 | Msa0650190:CDS |
TAAAACCCTCGTCGGCGATG+AGG | 0.653238 | 4_3:+56982511 | None:intergenic |
TGGAGTCTTCATGCACAGGT+CGG | 0.656975 | 4_3:-56980646 | Msa0650190:three_prime_UTR |
GATTATAAGAATGTCGTGGG+AGG | 0.659415 | 4_3:-56980900 | Msa0650190:CDS |
AGAGAGCCTAAACACTCACT+AGG | 0.661053 | 4_3:-56980830 | Msa0650190:exon |
ATCTCAGGGGACCAAAACCG+CGG | 0.669256 | 4_3:-56982489 | Msa0650190:intron |
GCAACTGATTGGATAATGGG+CGG | 0.691401 | 4_3:-56982647 | Msa0650190:exon |
AAAACGACAAGAAAGGTCGA+CGG | 0.693646 | 4_3:+56980795 | None:intergenic |
CTCCGCTGGATACGTAACCG+TGG | 0.694899 | 4_3:+56982556 | None:intergenic |
CGTGAAGCCTCTGCACACGT+CGG | 0.703926 | 4_3:-56982465 | Msa0650190:CDS |
AACCACGGTTACGTATCCAG+CGG | 0.727599 | 4_3:-56982558 | Msa0650190:CDS |
CRISPR-GE
badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
---|---|---|---|---|---|
!!! | TTGATGTTTAATTTTGATTT+AGG | - | chr4_3:56980812-56980831 | Msa0650190:three_prime_UTR | 15.0% |
!!! | TATTATTTGTTAGTTTCTTT+TGG | - | chr4_3:56980885-56980904 | Msa0650190:CDS | 15.0% |
!! | ATAAGTAAATATAACTTATC+AGG | + | chr4_3:56981276-56981295 | None:intergenic | 15.0% |
!!! | TTGATGTTTAATTTTGATTT+AGG | - | chr4_3:56980812-56980831 | Msa0650190:three_prime_UTR | 15.0% |
!!! | TATTATTTGTTAGTTTCTTT+TGG | - | chr4_3:56980885-56980904 | Msa0650190:CDS | 15.0% |
!! | ATAAGTAAATATAACTTATC+AGG | + | chr4_3:56981276-56981295 | None:intergenic | 15.0% |
!!! | TTTTGGTTGATAATAGTTTT+AGG | - | chr4_3:56980902-56980921 | Msa0650190:CDS | 20.0% |
!!! | TTTGGTTGATAATAGTTTTA+GGG | - | chr4_3:56980903-56980922 | Msa0650190:CDS | 20.0% |
!! | AGATAAAAACACAAAAAAAG+TGG | + | chr4_3:56981844-56981863 | None:intergenic | 20.0% |
!!! | AGGAAATGTTTTTGATTTTA+TGG | - | chr4_3:56981998-56982017 | Msa0650190:intron | 20.0% |
!!! | GGAAATGTTTTTGATTTTAT+GGG | - | chr4_3:56981999-56982018 | Msa0650190:intron | 20.0% |
!!! | GAATATGTTTTGAAAGAAAT+TGG | + | chr4_3:56982075-56982094 | None:intergenic | 20.0% |
!!! | TTTTCTTTTTTGAGTAGAAA+TGG | - | chr4_3:56982383-56982402 | Msa0650190:CDS | 20.0% |
!! | TAACTATTCCCAATATTATA+TGG | - | chr4_3:56982473-56982492 | Msa0650190:CDS | 20.0% |
!! | GTGAAAAACCATATAATATT+GGG | + | chr4_3:56982484-56982503 | None:intergenic | 20.0% |
!! | AGTGAAAAACCATATAATAT+TGG | + | chr4_3:56982485-56982504 | None:intergenic | 20.0% |
!!! | TTTTGGTTGATAATAGTTTT+AGG | - | chr4_3:56980902-56980921 | Msa0650190:CDS | 20.0% |
!!! | TTTGGTTGATAATAGTTTTA+GGG | - | chr4_3:56980903-56980922 | Msa0650190:CDS | 20.0% |
!! | AGATAAAAACACAAAAAAAG+TGG | + | chr4_3:56981844-56981863 | None:intergenic | 20.0% |
!!! | AGGAAATGTTTTTGATTTTA+TGG | - | chr4_3:56981998-56982017 | Msa0650190:intron | 20.0% |
!!! | GGAAATGTTTTTGATTTTAT+GGG | - | chr4_3:56981999-56982018 | Msa0650190:intron | 20.0% |
!!! | GAATATGTTTTGAAAGAAAT+TGG | + | chr4_3:56982075-56982094 | None:intergenic | 20.0% |
!!! | TTTTCTTTTTTGAGTAGAAA+TGG | - | chr4_3:56982383-56982402 | Msa0650190:CDS | 20.0% |
!! | TAACTATTCCCAATATTATA+TGG | - | chr4_3:56982473-56982492 | Msa0650190:CDS | 20.0% |
!! | GTGAAAAACCATATAATATT+GGG | + | chr4_3:56982484-56982503 | None:intergenic | 20.0% |
!! | AGTGAAAAACCATATAATAT+TGG | + | chr4_3:56982485-56982504 | None:intergenic | 20.0% |
! | CATAAACAAATCACTTTCAT+CGG | + | chr4_3:56980640-56980659 | None:intergenic | 25.0% |
! | ATTGAATTGTCGATATTATG+TGG | - | chr4_3:56981086-56981105 | Msa0650190:CDS | 25.0% |
! | TTGAATTGTCGATATTATGT+GGG | - | chr4_3:56981087-56981106 | Msa0650190:CDS | 25.0% |
! | ATATATATGCTATTCTTGAC+TGG | - | chr4_3:56981130-56981149 | Msa0650190:CDS | 25.0% |
! | GGTTAATTTCTCAGTAAATT+TGG | - | chr4_3:56981188-56981207 | Msa0650190:intron | 25.0% |
! | AACAAATCAAAATACTCAGA+TGG | + | chr4_3:56981237-56981256 | None:intergenic | 25.0% |
! | TACTTATTATGTGTTTATCC+TGG | - | chr4_3:56981289-56981308 | Msa0650190:CDS | 25.0% |
! | TATCTGAATATGTTTATGCT+TGG | - | chr4_3:56981631-56981650 | Msa0650190:CDS | 25.0% |
! | ATCTGAATATGTTTATGCTT+GGG | - | chr4_3:56981632-56981651 | Msa0650190:CDS | 25.0% |
!!! | TGTGTTTTTATCTTTTGTTC+TGG | - | chr4_3:56981851-56981870 | Msa0650190:intron | 25.0% |
! | CAAAGATAAAATGTTCAGAT+TGG | + | chr4_3:56982597-56982616 | None:intergenic | 25.0% |
!! | ATCTTTGATCTTATCTCTTT+TGG | - | chr4_3:56982610-56982629 | Msa0650190:CDS | 25.0% |
!!! | ACTCTTAAATGTGGTTTTTT+AGG | + | chr4_3:56982656-56982675 | None:intergenic | 25.0% |
! | CATAAACAAATCACTTTCAT+CGG | + | chr4_3:56980640-56980659 | None:intergenic | 25.0% |
! | ATTGAATTGTCGATATTATG+TGG | - | chr4_3:56981086-56981105 | Msa0650190:CDS | 25.0% |
! | TTGAATTGTCGATATTATGT+GGG | - | chr4_3:56981087-56981106 | Msa0650190:CDS | 25.0% |
! | ATATATATGCTATTCTTGAC+TGG | - | chr4_3:56981130-56981149 | Msa0650190:CDS | 25.0% |
! | GGTTAATTTCTCAGTAAATT+TGG | - | chr4_3:56981188-56981207 | Msa0650190:intron | 25.0% |
! | AACAAATCAAAATACTCAGA+TGG | + | chr4_3:56981237-56981256 | None:intergenic | 25.0% |
! | TACTTATTATGTGTTTATCC+TGG | - | chr4_3:56981289-56981308 | Msa0650190:CDS | 25.0% |
! | TATCTGAATATGTTTATGCT+TGG | - | chr4_3:56981631-56981650 | Msa0650190:CDS | 25.0% |
! | ATCTGAATATGTTTATGCTT+GGG | - | chr4_3:56981632-56981651 | Msa0650190:CDS | 25.0% |
!!! | TGTGTTTTTATCTTTTGTTC+TGG | - | chr4_3:56981851-56981870 | Msa0650190:intron | 25.0% |
! | CAAAGATAAAATGTTCAGAT+TGG | + | chr4_3:56982597-56982616 | None:intergenic | 25.0% |
!! | ATCTTTGATCTTATCTCTTT+TGG | - | chr4_3:56982610-56982629 | Msa0650190:CDS | 25.0% |
!!! | ACTCTTAAATGTGGTTTTTT+AGG | + | chr4_3:56982656-56982675 | None:intergenic | 25.0% |
! | CATGTTAATTTTTGCGTTAG+AGG | - | chr4_3:56980984-56981003 | Msa0650190:CDS | 30.0% |
ATATCGACAATTCAATCTGA+AGG | + | chr4_3:56981082-56981101 | None:intergenic | 30.0% | |
!!! | TATTCTTGACTGGTTTTGTA+AGG | - | chr4_3:56981140-56981159 | Msa0650190:intron | 30.0% |
TTATTATGTGTTTATCCTGG+TGG | - | chr4_3:56981292-56981311 | Msa0650190:CDS | 30.0% | |
TTCTCAATTTGAGAATTAGC+AGG | + | chr4_3:56981393-56981412 | None:intergenic | 30.0% | |
TCTAATCTAGATACGACATA+AGG | + | chr4_3:56981560-56981579 | None:intergenic | 30.0% | |
TGACAGCATTCCATATATTT+GGG | + | chr4_3:56981731-56981750 | None:intergenic | 30.0% | |
ATGACAGCATTCCATATATT+TGG | + | chr4_3:56981732-56981751 | None:intergenic | 30.0% | |
CACAAAAAAAGTGGATACAA+AGG | + | chr4_3:56981835-56981854 | None:intergenic | 30.0% | |
! | TTCTGGATTTTCATGCAAAT+TGG | - | chr4_3:56981868-56981887 | Msa0650190:intron | 30.0% |
! | TCTGGATTTTCATGCAAATT+GGG | - | chr4_3:56981869-56981888 | Msa0650190:intron | 30.0% |
ATTTGTCTTTCTCAACTGTT+GGG | + | chr4_3:56982097-56982116 | None:intergenic | 30.0% | |
! | ATGGATTATAAGAATGTCGT+GGG | - | chr4_3:56982146-56982165 | Msa0650190:intron | 30.0% |
AGCATTAAAAACGACAAGAA+AGG | + | chr4_3:56982264-56982283 | None:intergenic | 30.0% | |
TAGGATAAAGAGCAAATAGA+GGG | + | chr4_3:56982637-56982656 | None:intergenic | 30.0% | |
TTAGGATAAAGAGCAAATAG+AGG | + | chr4_3:56982638-56982657 | None:intergenic | 30.0% | |
! | CATGTTAATTTTTGCGTTAG+AGG | - | chr4_3:56980984-56981003 | Msa0650190:CDS | 30.0% |
ATATCGACAATTCAATCTGA+AGG | + | chr4_3:56981082-56981101 | None:intergenic | 30.0% | |
!!! | TATTCTTGACTGGTTTTGTA+AGG | - | chr4_3:56981140-56981159 | Msa0650190:intron | 30.0% |
TTATTATGTGTTTATCCTGG+TGG | - | chr4_3:56981292-56981311 | Msa0650190:CDS | 30.0% | |
TTCTCAATTTGAGAATTAGC+AGG | + | chr4_3:56981393-56981412 | None:intergenic | 30.0% | |
TCTAATCTAGATACGACATA+AGG | + | chr4_3:56981560-56981579 | None:intergenic | 30.0% | |
TGACAGCATTCCATATATTT+GGG | + | chr4_3:56981731-56981750 | None:intergenic | 30.0% | |
ATGACAGCATTCCATATATT+TGG | + | chr4_3:56981732-56981751 | None:intergenic | 30.0% | |
CACAAAAAAAGTGGATACAA+AGG | + | chr4_3:56981835-56981854 | None:intergenic | 30.0% | |
! | TTCTGGATTTTCATGCAAAT+TGG | - | chr4_3:56981868-56981887 | Msa0650190:intron | 30.0% |
! | TCTGGATTTTCATGCAAATT+GGG | - | chr4_3:56981869-56981888 | Msa0650190:intron | 30.0% |
ATTTGTCTTTCTCAACTGTT+GGG | + | chr4_3:56982097-56982116 | None:intergenic | 30.0% | |
! | ATGGATTATAAGAATGTCGT+GGG | - | chr4_3:56982146-56982165 | Msa0650190:intron | 30.0% |
AGCATTAAAAACGACAAGAA+AGG | + | chr4_3:56982264-56982283 | None:intergenic | 30.0% | |
TAGGATAAAGAGCAAATAGA+GGG | + | chr4_3:56982637-56982656 | None:intergenic | 30.0% | |
TTAGGATAAAGAGCAAATAG+AGG | + | chr4_3:56982638-56982657 | None:intergenic | 30.0% | |
CTAGCAACTGATTGGATAAT+GGG | - | chr4_3:56980399-56980418 | Msa0650190:three_prime_UTR | 35.0% | |
!! | AGTGATTTGTTTATGTCGAG+TGG | - | chr4_3:56980645-56980664 | Msa0650190:three_prime_UTR | 35.0% |
TCTGTTTATCGTGTTTGTGT+CGG | - | chr4_3:56981051-56981070 | Msa0650190:CDS | 35.0% | |
TTGAGTTTGTCTTAGTCCAT+TGG | - | chr4_3:56981163-56981182 | Msa0650190:intron | 35.0% | |
CTGAGAAATTAACCATCCAA+TGG | + | chr4_3:56981182-56981201 | None:intergenic | 35.0% | |
!! | TTTATCCTGGTGGATTATCT+TGG | - | chr4_3:56981302-56981321 | Msa0650190:CDS | 35.0% |
TTTGAGAATTAGCAGGTGAA+AGG | + | chr4_3:56981386-56981405 | None:intergenic | 35.0% | |
CAAATTGAGAACTCATCTCA+TGG | - | chr4_3:56981402-56981421 | Msa0650190:intron | 35.0% | |
! | TGAGGCTATTTCAAATCCTT+CGG | - | chr4_3:56981470-56981489 | Msa0650190:intron | 35.0% |
! | AAGCAACTGAAAAGCATGAA+TGG | + | chr4_3:56981508-56981527 | None:intergenic | 35.0% |
CGACATAAGGTATATTACCT+GGG | + | chr4_3:56981547-56981566 | None:intergenic | 35.0% | |
ACGACATAAGGTATATTACC+TGG | + | chr4_3:56981548-56981567 | None:intergenic | 35.0% | |
TATATTTGGGTCACAAGCAA+TGG | + | chr4_3:56981718-56981737 | None:intergenic | 35.0% | |
TTGCTTGTGACCCAAATATA+TGG | - | chr4_3:56981718-56981737 | Msa0650190:intron | 35.0% | |
! | ATAAGAGACTGGTTGGATAA+TGG | + | chr4_3:56981803-56981822 | None:intergenic | 35.0% |
AAAAGTGGATACAAAGGACA+TGG | + | chr4_3:56981829-56981848 | None:intergenic | 35.0% | |
TGTAGAAACTCCTGAAAAAG+AGG | - | chr4_3:56981956-56981975 | Msa0650190:intron | 35.0% | |
GATTTGTCTTTCTCAACTGT+TGG | + | chr4_3:56982098-56982117 | None:intergenic | 35.0% | |
! | CATGGATTATAAGAATGTCG+TGG | - | chr4_3:56982145-56982164 | Msa0650190:intron | 35.0% |
ATTGGCAGTTATGGTGATAA+TGG | - | chr4_3:56982184-56982203 | Msa0650190:intron | 35.0% | |
!!! | TCACTTTTTTCTTGAACGCA+TGG | - | chr4_3:56982500-56982519 | Msa0650190:intron | 35.0% |
ATACTTTACCCGTTGATGTA+AGG | - | chr4_3:56982551-56982570 | Msa0650190:CDS | 35.0% | |
TACTTTACCCGTTGATGTAA+GGG | - | chr4_3:56982552-56982571 | Msa0650190:CDS | 35.0% | |
CTAGCAACTGATTGGATAAT+GGG | - | chr4_3:56980399-56980418 | Msa0650190:three_prime_UTR | 35.0% | |
!! | AGTGATTTGTTTATGTCGAG+TGG | - | chr4_3:56980645-56980664 | Msa0650190:three_prime_UTR | 35.0% |
TCTGTTTATCGTGTTTGTGT+CGG | - | chr4_3:56981051-56981070 | Msa0650190:CDS | 35.0% | |
TTGAGTTTGTCTTAGTCCAT+TGG | - | chr4_3:56981163-56981182 | Msa0650190:intron | 35.0% | |
CTGAGAAATTAACCATCCAA+TGG | + | chr4_3:56981182-56981201 | None:intergenic | 35.0% | |
!! | TTTATCCTGGTGGATTATCT+TGG | - | chr4_3:56981302-56981321 | Msa0650190:CDS | 35.0% |
TTTGAGAATTAGCAGGTGAA+AGG | + | chr4_3:56981386-56981405 | None:intergenic | 35.0% | |
CAAATTGAGAACTCATCTCA+TGG | - | chr4_3:56981402-56981421 | Msa0650190:intron | 35.0% | |
! | TGAGGCTATTTCAAATCCTT+CGG | - | chr4_3:56981470-56981489 | Msa0650190:intron | 35.0% |
! | AAGCAACTGAAAAGCATGAA+TGG | + | chr4_3:56981508-56981527 | None:intergenic | 35.0% |
CGACATAAGGTATATTACCT+GGG | + | chr4_3:56981547-56981566 | None:intergenic | 35.0% | |
ACGACATAAGGTATATTACC+TGG | + | chr4_3:56981548-56981567 | None:intergenic | 35.0% | |
TATATTTGGGTCACAAGCAA+TGG | + | chr4_3:56981718-56981737 | None:intergenic | 35.0% | |
TTGCTTGTGACCCAAATATA+TGG | - | chr4_3:56981718-56981737 | Msa0650190:intron | 35.0% | |
! | ATAAGAGACTGGTTGGATAA+TGG | + | chr4_3:56981803-56981822 | None:intergenic | 35.0% |
AAAAGTGGATACAAAGGACA+TGG | + | chr4_3:56981829-56981848 | None:intergenic | 35.0% | |
TGTAGAAACTCCTGAAAAAG+AGG | - | chr4_3:56981956-56981975 | Msa0650190:intron | 35.0% | |
GATTTGTCTTTCTCAACTGT+TGG | + | chr4_3:56982098-56982117 | None:intergenic | 35.0% | |
! | CATGGATTATAAGAATGTCG+TGG | - | chr4_3:56982145-56982164 | Msa0650190:intron | 35.0% |
ATTGGCAGTTATGGTGATAA+TGG | - | chr4_3:56982184-56982203 | Msa0650190:intron | 35.0% | |
!!! | TCACTTTTTTCTTGAACGCA+TGG | - | chr4_3:56982500-56982519 | Msa0650190:intron | 35.0% |
ATACTTTACCCGTTGATGTA+AGG | - | chr4_3:56982551-56982570 | Msa0650190:CDS | 35.0% | |
TACTTTACCCGTTGATGTAA+GGG | - | chr4_3:56982552-56982571 | Msa0650190:CDS | 35.0% | |
GCTAGCAACTGATTGGATAA+TGG | - | chr4_3:56980398-56980417 | Msa0650190:three_prime_UTR | 40.0% | |
TTTCGGAGGATTTGAATGAC+TGG | - | chr4_3:56980607-56980626 | Msa0650190:three_prime_UTR | 40.0% | |
TTCGGAGGATTTGAATGACT+GGG | - | chr4_3:56980608-56980627 | Msa0650190:three_prime_UTR | 40.0% | |
GTTTGTCTTAGTCCATTGGA+TGG | - | chr4_3:56981167-56981186 | Msa0650190:intron | 40.0% | |
! | ATCTCATGGTAGTGAAGTCT+TGG | - | chr4_3:56981416-56981435 | Msa0650190:intron | 40.0% |
AAAGCATGAATGGCATGCTT+AGG | + | chr4_3:56981498-56981517 | None:intergenic | 40.0% | |
ATGGAAGATAAGAGACTGGT+TGG | + | chr4_3:56981810-56981829 | None:intergenic | 40.0% | |
! | TCATGCAAATTGGGTTGCAA+TGG | - | chr4_3:56981878-56981897 | Msa0650190:intron | 40.0% |
GCAACTGCAGATTCAACAAA+TGG | - | chr4_3:56981909-56981928 | Msa0650190:intron | 40.0% | |
! | TCAGGCTTTTCCTCTTTTTC+AGG | + | chr4_3:56981969-56981988 | None:intergenic | 40.0% |
GAAGCTGACAGTTACTGAAA+TGG | - | chr4_3:56982037-56982056 | Msa0650190:intron | 40.0% | |
AAATCTTCAGCTGATGCTGA+TGG | - | chr4_3:56982113-56982132 | Msa0650190:intron | 40.0% | |
GATTATAAGAATGTCGTGGG+AGG | - | chr4_3:56982149-56982168 | Msa0650190:intron | 40.0% | |
! | TTTCATGGGATTGGCAGTTA+TGG | - | chr4_3:56982175-56982194 | Msa0650190:intron | 40.0% |
! | GTTTTGCCTAGTGAGTGTTT+AGG | + | chr4_3:56982228-56982247 | None:intergenic | 40.0% |
AAAACGACAAGAAAGGTCGA+CGG | + | chr4_3:56982257-56982276 | None:intergenic | 40.0% | |
! | TTTTCTTGAACGCATGGCTT+TGG | - | chr4_3:56982506-56982525 | Msa0650190:intron | 40.0% |
TTTCTTGAACGCATGGCTTT+GGG | - | chr4_3:56982507-56982526 | Msa0650190:intron | 40.0% | |
GCTAGCAACTGATTGGATAA+TGG | - | chr4_3:56980398-56980417 | Msa0650190:three_prime_UTR | 40.0% | |
TTTCGGAGGATTTGAATGAC+TGG | - | chr4_3:56980607-56980626 | Msa0650190:three_prime_UTR | 40.0% | |
TTCGGAGGATTTGAATGACT+GGG | - | chr4_3:56980608-56980627 | Msa0650190:three_prime_UTR | 40.0% | |
GTTTGTCTTAGTCCATTGGA+TGG | - | chr4_3:56981167-56981186 | Msa0650190:intron | 40.0% | |
! | ATCTCATGGTAGTGAAGTCT+TGG | - | chr4_3:56981416-56981435 | Msa0650190:intron | 40.0% |
AAAGCATGAATGGCATGCTT+AGG | + | chr4_3:56981498-56981517 | None:intergenic | 40.0% | |
ATGGAAGATAAGAGACTGGT+TGG | + | chr4_3:56981810-56981829 | None:intergenic | 40.0% | |
! | TCATGCAAATTGGGTTGCAA+TGG | - | chr4_3:56981878-56981897 | Msa0650190:intron | 40.0% |
GCAACTGCAGATTCAACAAA+TGG | - | chr4_3:56981909-56981928 | Msa0650190:intron | 40.0% | |
! | TCAGGCTTTTCCTCTTTTTC+AGG | + | chr4_3:56981969-56981988 | None:intergenic | 40.0% |
GAAGCTGACAGTTACTGAAA+TGG | - | chr4_3:56982037-56982056 | Msa0650190:intron | 40.0% | |
AAATCTTCAGCTGATGCTGA+TGG | - | chr4_3:56982113-56982132 | Msa0650190:intron | 40.0% | |
GATTATAAGAATGTCGTGGG+AGG | - | chr4_3:56982149-56982168 | Msa0650190:intron | 40.0% | |
! | TTTCATGGGATTGGCAGTTA+TGG | - | chr4_3:56982175-56982194 | Msa0650190:intron | 40.0% |
! | GTTTTGCCTAGTGAGTGTTT+AGG | + | chr4_3:56982228-56982247 | None:intergenic | 40.0% |
AAAACGACAAGAAAGGTCGA+CGG | + | chr4_3:56982257-56982276 | None:intergenic | 40.0% | |
! | TTTTCTTGAACGCATGGCTT+TGG | - | chr4_3:56982506-56982525 | Msa0650190:intron | 40.0% |
TTTCTTGAACGCATGGCTTT+GGG | - | chr4_3:56982507-56982526 | Msa0650190:intron | 40.0% | |
!! | GCAACTGATTGGATAATGGG+CGG | - | chr4_3:56980402-56980421 | Msa0650190:three_prime_UTR | 45.0% |
ACCTCTCCAAACACCATTCT+CGG | + | chr4_3:56980681-56980700 | None:intergenic | 45.0% | |
TATGTGGGTTCAGAGTCTGT+TGG | - | chr4_3:56981102-56981121 | Msa0650190:CDS | 45.0% | |
CAGATCCAAGATAATCCACC+AGG | + | chr4_3:56981310-56981329 | None:intergenic | 45.0% | |
ACAAGACAATCCTTGGGAGA+AGG | + | chr4_3:56981450-56981469 | None:intergenic | 45.0% | |
! | TCCCAAGGATTGTCTTGTTG+AGG | - | chr4_3:56981452-56981471 | Msa0650190:intron | 45.0% |
GCCTCAACAAGACAATCCTT+GGG | + | chr4_3:56981456-56981475 | None:intergenic | 45.0% | |
AGCCTCAACAAGACAATCCT+TGG | + | chr4_3:56981457-56981476 | None:intergenic | 45.0% | |
! | GTTGCTTAGCTCAAGTGTTG+AGG | - | chr4_3:56981521-56981540 | Msa0650190:intron | 45.0% |
!! | CAATGGATTGCACAACAGTC+TGG | + | chr4_3:56981701-56981720 | None:intergenic | 45.0% |
TCGAAGAAACTAGTCACTGC+AGG | + | chr4_3:56981762-56981781 | None:intergenic | 45.0% | |
TTCTTCGAATCACAGCTTGC+AGG | - | chr4_3:56981774-56981793 | Msa0650190:intron | 45.0% | |
GGACATGGAAGATAAGAGAC+TGG | + | chr4_3:56981814-56981833 | None:intergenic | 45.0% | |
!!! | ACAAATGGTGCTGCTTTTGC+TGG | - | chr4_3:56981924-56981943 | Msa0650190:intron | 45.0% |
ACATTTCCTGACTGAGACTC+AGG | + | chr4_3:56981987-56982006 | None:intergenic | 45.0% | |
AGAGAGCCTAAACACTCACT+AGG | - | chr4_3:56982219-56982238 | Msa0650190:intron | 45.0% | |
GAAATGGAGTCTTCATGCAC+AGG | - | chr4_3:56982399-56982418 | Msa0650190:CDS | 45.0% | |
ACATTGGCCCTTACATCAAC+GGG | + | chr4_3:56982562-56982581 | None:intergenic | 45.0% | |
CACATTGGCCCTTACATCAA+CGG | + | chr4_3:56982563-56982582 | None:intergenic | 45.0% | |
TTGGTCCATGACGAACACAT+TGG | + | chr4_3:56982578-56982597 | None:intergenic | 45.0% | |
!! | GCAACTGATTGGATAATGGG+CGG | - | chr4_3:56980402-56980421 | Msa0650190:three_prime_UTR | 45.0% |
ACCTCTCCAAACACCATTCT+CGG | + | chr4_3:56980681-56980700 | None:intergenic | 45.0% | |
TATGTGGGTTCAGAGTCTGT+TGG | - | chr4_3:56981102-56981121 | Msa0650190:CDS | 45.0% | |
CAGATCCAAGATAATCCACC+AGG | + | chr4_3:56981310-56981329 | None:intergenic | 45.0% | |
ACAAGACAATCCTTGGGAGA+AGG | + | chr4_3:56981450-56981469 | None:intergenic | 45.0% | |
! | TCCCAAGGATTGTCTTGTTG+AGG | - | chr4_3:56981452-56981471 | Msa0650190:intron | 45.0% |
GCCTCAACAAGACAATCCTT+GGG | + | chr4_3:56981456-56981475 | None:intergenic | 45.0% | |
AGCCTCAACAAGACAATCCT+TGG | + | chr4_3:56981457-56981476 | None:intergenic | 45.0% | |
! | GTTGCTTAGCTCAAGTGTTG+AGG | - | chr4_3:56981521-56981540 | Msa0650190:intron | 45.0% |
!! | CAATGGATTGCACAACAGTC+TGG | + | chr4_3:56981701-56981720 | None:intergenic | 45.0% |
TCGAAGAAACTAGTCACTGC+AGG | + | chr4_3:56981762-56981781 | None:intergenic | 45.0% | |
TTCTTCGAATCACAGCTTGC+AGG | - | chr4_3:56981774-56981793 | Msa0650190:intron | 45.0% | |
GGACATGGAAGATAAGAGAC+TGG | + | chr4_3:56981814-56981833 | None:intergenic | 45.0% | |
!!! | ACAAATGGTGCTGCTTTTGC+TGG | - | chr4_3:56981924-56981943 | Msa0650190:intron | 45.0% |
ACATTTCCTGACTGAGACTC+AGG | + | chr4_3:56981987-56982006 | None:intergenic | 45.0% | |
AGAGAGCCTAAACACTCACT+AGG | - | chr4_3:56982219-56982238 | Msa0650190:intron | 45.0% | |
GAAATGGAGTCTTCATGCAC+AGG | - | chr4_3:56982399-56982418 | Msa0650190:CDS | 45.0% | |
ACATTGGCCCTTACATCAAC+GGG | + | chr4_3:56982562-56982581 | None:intergenic | 45.0% | |
CACATTGGCCCTTACATCAA+CGG | + | chr4_3:56982563-56982582 | None:intergenic | 45.0% | |
TTGGTCCATGACGAACACAT+TGG | + | chr4_3:56982578-56982597 | None:intergenic | 45.0% | |
!! | ACTGATTGGATAATGGGCGG+TGG | - | chr4_3:56980405-56980424 | Msa0650190:three_prime_UTR | 50.0% |
AACCACGGTTACGTATCCAG+CGG | - | chr4_3:56980491-56980510 | Msa0650190:three_prime_UTR | 50.0% | |
CCCTGAGATAAAACCCTCGT+CGG | + | chr4_3:56980549-56980568 | None:intergenic | 50.0% | |
!! | CCGACGAGGGTTTTATCTCA+GGG | - | chr4_3:56980546-56980565 | Msa0650190:three_prime_UTR | 50.0% |
!! | CGACGAGGGTTTTATCTCAG+GGG | - | chr4_3:56980547-56980566 | Msa0650190:three_prime_UTR | 50.0% |
TGGGTTCAGAGTCTGTTGGA+CGG | - | chr4_3:56981106-56981125 | Msa0650190:CDS | 50.0% | |
GAAAAGCCTGAGTCTCAGTC+AGG | - | chr4_3:56981978-56981997 | Msa0650190:intron | 50.0% | |
TCTTCAGCTGATGCTGATGG+AGG | - | chr4_3:56982116-56982135 | Msa0650190:intron | 50.0% | |
TGCTGATGGAGGCAGTTTCA+TGG | - | chr4_3:56982127-56982146 | Msa0650190:intron | 50.0% | |
TGTCGTGGGAGGAAGTTTCA+TGG | - | chr4_3:56982160-56982179 | Msa0650190:intron | 50.0% | |
GTCGTGGGAGGAAGTTTCAT+GGG | - | chr4_3:56982161-56982180 | Msa0650190:intron | 50.0% | |
GGGAGGAAGTTTCATGGGAT+TGG | - | chr4_3:56982166-56982185 | Msa0650190:intron | 50.0% | |
TGGAGTCTTCATGCACAGGT+CGG | - | chr4_3:56982403-56982422 | Msa0650190:CDS | 50.0% | |
!! | GGCTTTGGGAAAGTGTGGAT+TGG | - | chr4_3:56982521-56982540 | Msa0650190:CDS | 50.0% |
AAGGGCCAATGTGTTCGTCA+TGG | - | chr4_3:56982570-56982589 | Msa0650190:CDS | 50.0% | |
!! | ACTGATTGGATAATGGGCGG+TGG | - | chr4_3:56980405-56980424 | Msa0650190:three_prime_UTR | 50.0% |
AACCACGGTTACGTATCCAG+CGG | - | chr4_3:56980491-56980510 | Msa0650190:three_prime_UTR | 50.0% | |
CCCTGAGATAAAACCCTCGT+CGG | + | chr4_3:56980549-56980568 | None:intergenic | 50.0% | |
!! | CCGACGAGGGTTTTATCTCA+GGG | - | chr4_3:56980546-56980565 | Msa0650190:three_prime_UTR | 50.0% |
!! | CGACGAGGGTTTTATCTCAG+GGG | - | chr4_3:56980547-56980566 | Msa0650190:three_prime_UTR | 50.0% |
TGGGTTCAGAGTCTGTTGGA+CGG | - | chr4_3:56981106-56981125 | Msa0650190:CDS | 50.0% | |
GAAAAGCCTGAGTCTCAGTC+AGG | - | chr4_3:56981978-56981997 | Msa0650190:intron | 50.0% | |
TCTTCAGCTGATGCTGATGG+AGG | - | chr4_3:56982116-56982135 | Msa0650190:intron | 50.0% | |
TGCTGATGGAGGCAGTTTCA+TGG | - | chr4_3:56982127-56982146 | Msa0650190:intron | 50.0% | |
TGTCGTGGGAGGAAGTTTCA+TGG | - | chr4_3:56982160-56982179 | Msa0650190:intron | 50.0% | |
GTCGTGGGAGGAAGTTTCAT+GGG | - | chr4_3:56982161-56982180 | Msa0650190:intron | 50.0% | |
GGGAGGAAGTTTCATGGGAT+TGG | - | chr4_3:56982166-56982185 | Msa0650190:intron | 50.0% | |
TGGAGTCTTCATGCACAGGT+CGG | - | chr4_3:56982403-56982422 | Msa0650190:CDS | 50.0% | |
!! | GGCTTTGGGAAAGTGTGGAT+TGG | - | chr4_3:56982521-56982540 | Msa0650190:CDS | 50.0% |
AAGGGCCAATGTGTTCGTCA+TGG | - | chr4_3:56982570-56982589 | Msa0650190:CDS | 50.0% | |
!! | GATTGGATAATGGGCGGTGG+CGG | - | chr4_3:56980408-56980427 | Msa0650190:three_prime_UTR | 55.0% |
CGTATCCAGCGGAGAAACAG+TGG | - | chr4_3:56980502-56980521 | Msa0650190:three_prime_UTR | 55.0% | |
CAGCGGAGAAACAGTGGTCT+CGG | - | chr4_3:56980508-56980527 | Msa0650190:three_prime_UTR | 55.0% | |
TAAAACCCTCGTCGGCGATG+AGG | + | chr4_3:56980541-56980560 | None:intergenic | 55.0% | |
!! | GCCGACGAGGGTTTTATCTC+AGG | - | chr4_3:56980545-56980564 | Msa0650190:three_prime_UTR | 55.0% |
ATCTCAGGGGACCAAAACCG+CGG | - | chr4_3:56980560-56980579 | Msa0650190:three_prime_UTR | 55.0% | |
CCAAACACCATTCTCGGCGT+AGG | + | chr4_3:56980675-56980694 | None:intergenic | 55.0% | |
CCTACGCCGAGAATGGTGTT+TGG | - | chr4_3:56980672-56980691 | Msa0650190:three_prime_UTR | 55.0% | |
GCCGAGAATGGTGTTTGGAG+AGG | - | chr4_3:56980677-56980696 | Msa0650190:three_prime_UTR | 55.0% | |
TGGAGAGGTTCCGACGTTGA+AGG | - | chr4_3:56980692-56980711 | Msa0650190:three_prime_UTR | 55.0% | |
GGTTCCGACGTTGAAGGAAG+CGG | - | chr4_3:56980698-56980717 | Msa0650190:three_prime_UTR | 55.0% | |
TCCTCCGCTTCCTTCAACGT+CGG | + | chr4_3:56980705-56980724 | None:intergenic | 55.0% | |
GGGTTCAGAGTCTGTTGGAC+GGG | - | chr4_3:56981107-56981126 | Msa0650190:CDS | 55.0% | |
GGTTCTGTCTCCTTCTCCCA+AGG | - | chr4_3:56981437-56981456 | Msa0650190:intron | 55.0% | |
!! | ATGGCATGCTTAGGCACCGA+AGG | + | chr4_3:56981489-56981508 | None:intergenic | 55.0% |
!! | TAGCTCAAGTGTTGAGGCCC+AGG | - | chr4_3:56981527-56981546 | Msa0650190:CDS | 55.0% |
!!! | GGTGCTGCTTTTGCTGGTTC+TGG | - | chr4_3:56981930-56981949 | Msa0650190:intron | 55.0% |
!! | CGCATGGCTTTGGGAAAGTG+TGG | - | chr4_3:56982516-56982535 | Msa0650190:intron | 55.0% |
!! | GATTGGATAATGGGCGGTGG+CGG | - | chr4_3:56980408-56980427 | Msa0650190:three_prime_UTR | 55.0% |
CGTATCCAGCGGAGAAACAG+TGG | - | chr4_3:56980502-56980521 | Msa0650190:three_prime_UTR | 55.0% | |
CAGCGGAGAAACAGTGGTCT+CGG | - | chr4_3:56980508-56980527 | Msa0650190:three_prime_UTR | 55.0% | |
TAAAACCCTCGTCGGCGATG+AGG | + | chr4_3:56980541-56980560 | None:intergenic | 55.0% | |
!! | GCCGACGAGGGTTTTATCTC+AGG | - | chr4_3:56980545-56980564 | Msa0650190:three_prime_UTR | 55.0% |
ATCTCAGGGGACCAAAACCG+CGG | - | chr4_3:56980560-56980579 | Msa0650190:three_prime_UTR | 55.0% | |
CCAAACACCATTCTCGGCGT+AGG | + | chr4_3:56980675-56980694 | None:intergenic | 55.0% | |
CCTACGCCGAGAATGGTGTT+TGG | - | chr4_3:56980672-56980691 | Msa0650190:three_prime_UTR | 55.0% | |
GCCGAGAATGGTGTTTGGAG+AGG | - | chr4_3:56980677-56980696 | Msa0650190:three_prime_UTR | 55.0% | |
TGGAGAGGTTCCGACGTTGA+AGG | - | chr4_3:56980692-56980711 | Msa0650190:three_prime_UTR | 55.0% | |
GGTTCCGACGTTGAAGGAAG+CGG | - | chr4_3:56980698-56980717 | Msa0650190:three_prime_UTR | 55.0% | |
TCCTCCGCTTCCTTCAACGT+CGG | + | chr4_3:56980705-56980724 | None:intergenic | 55.0% | |
GGGTTCAGAGTCTGTTGGAC+GGG | - | chr4_3:56981107-56981126 | Msa0650190:CDS | 55.0% | |
GGTTCTGTCTCCTTCTCCCA+AGG | - | chr4_3:56981437-56981456 | Msa0650190:intron | 55.0% | |
!! | ATGGCATGCTTAGGCACCGA+AGG | + | chr4_3:56981489-56981508 | None:intergenic | 55.0% |
!! | TAGCTCAAGTGTTGAGGCCC+AGG | - | chr4_3:56981527-56981546 | Msa0650190:CDS | 55.0% |
!!! | GGTGCTGCTTTTGCTGGTTC+TGG | - | chr4_3:56981930-56981949 | Msa0650190:intron | 55.0% |
!! | CGCATGGCTTTGGGAAAGTG+TGG | - | chr4_3:56982516-56982535 | Msa0650190:intron | 55.0% |
CGTCGCTAGGTCAGGCTTCA+GGG | - | chr4_3:56980467-56980486 | Msa0650190:three_prime_UTR | 60.0% | |
GTCGCTAGGTCAGGCTTCAG+GGG | - | chr4_3:56980468-56980487 | Msa0650190:three_prime_UTR | 60.0% | |
GTCAGGCTTCAGGGGAACCA+CGG | - | chr4_3:56980476-56980495 | Msa0650190:three_prime_UTR | 60.0% | |
CTCCGCTGGATACGTAACCG+TGG | + | chr4_3:56980496-56980515 | None:intergenic | 60.0% | |
! | CGAGACCACTGTTTCTCCGC+TGG | + | chr4_3:56980510-56980529 | None:intergenic | 60.0% |
! | AGGCTTCACGTCCGCGGTTT+TGG | + | chr4_3:56980574-56980593 | None:intergenic | 60.0% |
CGTGAAGCCTCTGCACACGT+CGG | - | chr4_3:56980584-56980603 | Msa0650190:three_prime_UTR | 60.0% | |
!! | GCCTCTGCACACGTCGGTTT+CGG | - | chr4_3:56980590-56980609 | Msa0650190:three_prime_UTR | 60.0% |
TCCGAAACCGACGTGTGCAG+AGG | + | chr4_3:56980594-56980613 | None:intergenic | 60.0% | |
!! | TCTGCACACGTCGGTTTCGG+AGG | - | chr4_3:56980593-56980612 | Msa0650190:three_prime_UTR | 60.0% |
TGGAGAGCCTACGCCGAGAA+TGG | - | chr4_3:56980665-56980684 | Msa0650190:three_prime_UTR | 60.0% | |
TCCGACGTTGAAGGAAGCGG+AGG | - | chr4_3:56980701-56980720 | Msa0650190:three_prime_UTR | 60.0% | |
GAAGGAAGCGGAGGAAGCCA+CGG | - | chr4_3:56980710-56980729 | Msa0650190:three_prime_UTR | 60.0% | |
CGCGTGCTTCAATTCAGCCG+TGG | + | chr4_3:56980730-56980749 | None:intergenic | 60.0% | |
CGTCGCTAGGTCAGGCTTCA+GGG | - | chr4_3:56980467-56980486 | Msa0650190:three_prime_UTR | 60.0% | |
GTCGCTAGGTCAGGCTTCAG+GGG | - | chr4_3:56980468-56980487 | Msa0650190:three_prime_UTR | 60.0% | |
GTCAGGCTTCAGGGGAACCA+CGG | - | chr4_3:56980476-56980495 | Msa0650190:three_prime_UTR | 60.0% | |
CTCCGCTGGATACGTAACCG+TGG | + | chr4_3:56980496-56980515 | None:intergenic | 60.0% | |
! | CGAGACCACTGTTTCTCCGC+TGG | + | chr4_3:56980510-56980529 | None:intergenic | 60.0% |
! | AGGCTTCACGTCCGCGGTTT+TGG | + | chr4_3:56980574-56980593 | None:intergenic | 60.0% |
CGTGAAGCCTCTGCACACGT+CGG | - | chr4_3:56980584-56980603 | Msa0650190:three_prime_UTR | 60.0% | |
!! | GCCTCTGCACACGTCGGTTT+CGG | - | chr4_3:56980590-56980609 | Msa0650190:three_prime_UTR | 60.0% |
TCCGAAACCGACGTGTGCAG+AGG | + | chr4_3:56980594-56980613 | None:intergenic | 60.0% | |
!! | TCTGCACACGTCGGTTTCGG+AGG | - | chr4_3:56980593-56980612 | Msa0650190:three_prime_UTR | 60.0% |
TGGAGAGCCTACGCCGAGAA+TGG | - | chr4_3:56980665-56980684 | Msa0650190:three_prime_UTR | 60.0% | |
TCCGACGTTGAAGGAAGCGG+AGG | - | chr4_3:56980701-56980720 | Msa0650190:three_prime_UTR | 60.0% | |
GAAGGAAGCGGAGGAAGCCA+CGG | - | chr4_3:56980710-56980729 | Msa0650190:three_prime_UTR | 60.0% | |
CGCGTGCTTCAATTCAGCCG+TGG | + | chr4_3:56980730-56980749 | None:intergenic | 60.0% | |
!! | CGGTGGCGGAACGATGAGGA+CGG | - | chr4_3:56980422-56980441 | Msa0650190:three_prime_UTR | 65.0% |
TGACCTAGCGACGCCGATGC+CGG | + | chr4_3:56980460-56980479 | None:intergenic | 65.0% | |
GCGTCGCTAGGTCAGGCTTC+AGG | - | chr4_3:56980466-56980485 | Msa0650190:three_prime_UTR | 65.0% | |
GTGCAGAGGCTTCACGTCCG+CGG | + | chr4_3:56980580-56980599 | None:intergenic | 65.0% | |
!! | CGGTGGCGGAACGATGAGGA+CGG | - | chr4_3:56980422-56980441 | Msa0650190:three_prime_UTR | 65.0% |
TGACCTAGCGACGCCGATGC+CGG | + | chr4_3:56980460-56980479 | None:intergenic | 65.0% | |
GCGTCGCTAGGTCAGGCTTC+AGG | - | chr4_3:56980466-56980485 | Msa0650190:three_prime_UTR | 65.0% | |
GTGCAGAGGCTTCACGTCCG+CGG | + | chr4_3:56980580-56980599 | None:intergenic | 65.0% | |
!! | TGGGCGGTGGCGGAACGATG+AGG | - | chr4_3:56980418-56980437 | Msa0650190:three_prime_UTR | 70.0% |
AGGACGGCAGCCAAGCTCGC+CGG | - | chr4_3:56980438-56980457 | Msa0650190:three_prime_UTR | 70.0% | |
GCAGCCAAGCTCGCCGGCAT+CGG | - | chr4_3:56980444-56980463 | Msa0650190:three_prime_UTR | 70.0% | |
!! | GGCATCGGCGTCGCTAGGTC+AGG | - | chr4_3:56980459-56980478 | Msa0650190:three_prime_UTR | 70.0% |
!! | TGGGCGGTGGCGGAACGATG+AGG | - | chr4_3:56980418-56980437 | Msa0650190:three_prime_UTR | 70.0% |
AGGACGGCAGCCAAGCTCGC+CGG | - | chr4_3:56980438-56980457 | Msa0650190:three_prime_UTR | 70.0% | |
GCAGCCAAGCTCGCCGGCAT+CGG | - | chr4_3:56980444-56980463 | Msa0650190:three_prime_UTR | 70.0% | |
!! | GGCATCGGCGTCGCTAGGTC+AGG | - | chr4_3:56980459-56980478 | Msa0650190:three_prime_UTR | 70.0% |
GACGCCGATGCCGGCGAGCT+TGG | + | chr4_3:56980451-56980470 | None:intergenic | 75.0% | |
!! | TCGCCGGCATCGGCGTCGCT+AGG | - | chr4_3:56980454-56980473 | Msa0650190:three_prime_UTR | 75.0% |
ACCGCGCCTCATCGCCGACG+AGG | - | chr4_3:56980532-56980551 | Msa0650190:three_prime_UTR | 75.0% | |
CCCTCGTCGGCGATGAGGCG+CGG | + | chr4_3:56980536-56980555 | None:intergenic | 75.0% | |
CCGCGCCTCATCGCCGACGA+GGG | - | chr4_3:56980533-56980552 | Msa0650190:three_prime_UTR | 75.0% | |
GACGCCGATGCCGGCGAGCT+TGG | + | chr4_3:56980451-56980470 | None:intergenic | 75.0% | |
!! | TCGCCGGCATCGGCGTCGCT+AGG | - | chr4_3:56980454-56980473 | Msa0650190:three_prime_UTR | 75.0% |
ACCGCGCCTCATCGCCGACG+AGG | - | chr4_3:56980532-56980551 | Msa0650190:three_prime_UTR | 75.0% | |
CCCTCGTCGGCGATGAGGCG+CGG | + | chr4_3:56980536-56980555 | None:intergenic | 75.0% | |
CCGCGCCTCATCGCCGACGA+GGG | - | chr4_3:56980533-56980552 | Msa0650190:three_prime_UTR | 75.0% |
Chromosome | Type | Strat | End | Strand | Name |
---|---|---|---|---|---|
chr4_3 | gene | 56980394 | 56982677 | 56980394 | ID=Msa0650190;Name=Msa0650190 |
chr4_3 | mRNA | 56980394 | 56982677 | 56980394 | ID=Msa0650190-mRNA-1;Parent=Msa0650190;Name=Msa0650190-mRNA-1;_AED=0.11;_eAED=0.11;_QI=23|0.75|0.6|1|0.5|0.6|5|448|301 |
chr4_3 | exon | 56980394 | 56981152 | 56980394 | ID=Msa0650190-mRNA-1:exon:14941;Parent=Msa0650190-mRNA-1 |
chr4_3 | exon | 56981276 | 56981369 | 56981276 | ID=Msa0650190-mRNA-1:exon:14940;Parent=Msa0650190-mRNA-1 |
chr4_3 | exon | 56981523 | 56981694 | 56981523 | ID=Msa0650190-mRNA-1:exon:14939;Parent=Msa0650190-mRNA-1 |
chr4_3 | exon | 56982314 | 56982504 | 56982314 | ID=Msa0650190-mRNA-1:exon:14938;Parent=Msa0650190-mRNA-1 |
chr4_3 | exon | 56982517 | 56982677 | 56982517 | ID=Msa0650190-mRNA-1:exon:14937;Parent=Msa0650190-mRNA-1 |
chr4_3 | five_prime_UTR | 56982655 | 56982677 | 56982655 | ID=Msa0650190-mRNA-1:five_prime_utr;Parent=Msa0650190-mRNA-1 |
chr4_3 | CDS | 56982517 | 56982654 | 56982517 | ID=Msa0650190-mRNA-1:cds;Parent=Msa0650190-mRNA-1 |
chr4_3 | CDS | 56982314 | 56982504 | 56982314 | ID=Msa0650190-mRNA-1:cds;Parent=Msa0650190-mRNA-1 |
chr4_3 | CDS | 56981523 | 56981694 | 56981523 | ID=Msa0650190-mRNA-1:cds;Parent=Msa0650190-mRNA-1 |
chr4_3 | CDS | 56981276 | 56981369 | 56981276 | ID=Msa0650190-mRNA-1:cds;Parent=Msa0650190-mRNA-1 |
chr4_3 | CDS | 56980842 | 56981152 | 56980842 | ID=Msa0650190-mRNA-1:cds;Parent=Msa0650190-mRNA-1 |
chr4_3 | three_prime_UTR | 56980394 | 56980841 | 56980394 | ID=Msa0650190-mRNA-1:three_prime_utr;Parent=Msa0650190-mRNA-1 |
Gene Sequence |
Protein sequence |