Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1409560 | XP_039685827.1 | 95.682 | 579 | 10 | 2 | 1 | 578 | 1 | 565 | 0.0 | 1125 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1409560 | sp|Q69ZC8|GPAM1_MOUSE | 36.170 | 141 | 70 | 6 | 415 | 551 | 194 | 318 | 3.68e-11 | 68.6 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1409560 | A0A072VP15 | 95.682 | 579 | 10 | 2 | 1 | 578 | 1 | 565 | 0.0 | 1125 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0119090 | Msa1409560 | 0.817021 | 4.092405e-52 | -8.615850e-47 |
| Msa1377790 | Msa1409560 | 0.825702 | 4.057542e-54 | -8.615850e-47 |
| Msa0162430 | Msa1409560 | 0.820840 | 5.545985e-53 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1409560 | MtrunA17_Chr1g0200551 | 95.682 | 579 | 10 | 2 | 1 | 578 | 1 | 565 | 0.0 | 1125 |
| Msa1409560 | MtrunA17_Chr2g0322111 | 46.753 | 77 | 41 | 0 | 270 | 346 | 23 | 99 | 3.47e-13 | 69.7 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1409560 | AT1G65280.2 | 63.813 | 514 | 158 | 5 | 75 | 578 | 93 | 588 | 0.0 | 570 |
| Msa1409560 | AT1G65280.1 | 63.813 | 514 | 158 | 5 | 75 | 578 | 93 | 588 | 0.0 | 570 |
| Msa1409560 | AT5G22080.2 | 42.857 | 77 | 44 | 0 | 270 | 346 | 19 | 95 | 9.19e-12 | 65.5 |
| Msa1409560 | AT5G22080.1 | 42.857 | 77 | 44 | 0 | 270 | 346 | 19 | 95 | 1.05e-11 | 65.9 |
Find 175 sgRNAs with CRISPR-Local
Find 650 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| CCTTTGTGCCCCGGCTAAAT+TGG | 0.063769 | tig0023526:+66352 | None:intergenic |
| TCCTTAAATCTTAAGGAAAA+TGG | 0.102094 | tig0023526:-73204 | Msa1409560:CDS |
| TGTCATCCATTCATCTCTTT+TGG | 0.184118 | tig0023526:+68263 | None:intergenic |
| TGTTACCATCGGACATATTA+TGG | 0.246849 | tig0023526:+71908 | None:intergenic |
| TAAGTATATATTTGATTAAC+TGG | 0.253797 | tig0023526:-65425 | Msa1409560:three_prime_UTR |
| CATTTCACGGAGTGCAGTTT+GGG | 0.260060 | tig0023526:+73535 | None:intergenic |
| TCCCTTATCTGTCTGTTGTT+TGG | 0.265809 | tig0023526:+65976 | None:intergenic |
| TTATCTTCAAGGTTTAATTC+TGG | 0.268212 | tig0023526:-65851 | Msa1409560:CDS |
| GCTGGAACCGAACATGTTTC+AGG | 0.278323 | tig0023526:+73069 | None:intergenic |
| TCAACAATTTATGTTGAGTT+TGG | 0.285209 | tig0023526:+65279 | None:intergenic |
| AACTCAGCAGACGGCATTGC+AGG | 0.288590 | tig0023526:+72877 | None:intergenic |
| ATTCTGTTGGTCCTAGAAAA+AGG | 0.288787 | tig0023526:-73002 | Msa1409560:intron |
| TTATTGCAAATGATTGATAA+TGG | 0.291783 | tig0023526:-73294 | Msa1409560:CDS |
| CTTGCTCTCTCTTTCTCGTT+TGG | 0.292175 | tig0023526:+73655 | None:intergenic |
| GCAAGAACAGGAAGACTTAA+AGG | 0.293951 | tig0023526:-69832 | Msa1409560:intron |
| TGCGTTTGTCACCCATTATT+AGG | 0.296086 | tig0023526:+73819 | None:intergenic |
| TTTCATTTCCTTAAATCTTA+AGG | 0.298235 | tig0023526:-73211 | Msa1409560:CDS |
| GGCTAGTACGGATGCAGATT+TGG | 0.310569 | tig0023526:-66083 | Msa1409560:CDS |
| GCGTTTGTCACCCATTATTA+GGG | 0.326011 | tig0023526:+73820 | None:intergenic |
| CCTTAAATCTTAAGGAAAAT+GGG | 0.327174 | tig0023526:-73203 | Msa1409560:CDS |
| GTAGAGGAGACACTAGTATT+TGG | 0.331088 | tig0023526:-66326 | Msa1409560:CDS |
| CTTCATCCTCTCCCTAATAA+TGG | 0.332145 | tig0023526:-73831 | Msa1409560:exon |
| TAATTTAATAAATGCTTGAT+TGG | 0.336297 | tig0023526:+70919 | None:intergenic |
| TCCCCTACTTTAGATGTTGT+TGG | 0.345795 | tig0023526:-73150 | Msa1409560:CDS |
| CAGAGGCACAAAACGAATTC+AGG | 0.358270 | tig0023526:-72831 | Msa1409560:intron |
| CTTTCTGAGCTCTGTCAGTC+GGG | 0.358481 | tig0023526:+66295 | None:intergenic |
| TGTGGATGAGAGCATTTATC+TGG | 0.358733 | tig0023526:+70944 | None:intergenic |
| TGGCTGCATTTGATGAAATA+TGG | 0.362095 | tig0023526:-65254 | Msa1409560:three_prime_UTR |
| CTTTGTGCCCCGGCTAAATT+GGG | 0.367864 | tig0023526:+66353 | None:intergenic |
| TCATTTCACGGAGTGCAGTT+TGG | 0.369331 | tig0023526:+73534 | None:intergenic |
| GGAGGGTGATGATGAGCTTC+TGG | 0.370086 | tig0023526:-68310 | Msa1409560:CDS |
| TATTGCAAATGATTGATAAT+GGG | 0.371583 | tig0023526:-73293 | Msa1409560:CDS |
| CCGATCTCTAAGAAGCTTGT+TGG | 0.372912 | tig0023526:+65743 | None:intergenic |
| AACAGCCCATATGATGTTCT+AGG | 0.376709 | tig0023526:-71937 | Msa1409560:CDS |
| GAATTTCATCTTCGGAAGAT+TGG | 0.377896 | tig0023526:+73561 | None:intergenic |
| TAGAGTTCTGATTCTGCAAT+TGG | 0.378577 | tig0023526:-65570 | Msa1409560:three_prime_UTR |
| CACTTATACCACACTGCATA+TGG | 0.383865 | tig0023526:-65362 | Msa1409560:three_prime_UTR |
| GTATCAGGTCACCAGGATAA+TGG | 0.401649 | tig0023526:-71971 | Msa1409560:intron |
| CATCTGTCAATCACTTTGTC+TGG | 0.403485 | tig0023526:-65778 | Msa1409560:three_prime_UTR |
| ATGGGACCGTGAAAAGGATC+TGG | 0.406955 | tig0023526:-65924 | Msa1409560:CDS |
| CACGGCGATGACGTCGGCGG+CGG | 0.413321 | tig0023526:+73711 | None:intergenic |
| TCCAAACAACAGACAGATAA+GGG | 0.415206 | tig0023526:-65977 | Msa1409560:CDS |
| TTCATCCTCTCCCTAATAAT+GGG | 0.418702 | tig0023526:-73830 | Msa1409560:exon |
| TGTCTGAGGGATTATCTTCA+AGG | 0.420030 | tig0023526:-65862 | Msa1409560:CDS |
| AATTTCATCTTCGGAAGATT+GGG | 0.420806 | tig0023526:+73562 | None:intergenic |
| CGTGAAAAGGATCTGGGAGC+TGG | 0.429164 | tig0023526:-65917 | Msa1409560:CDS |
| TTAACTCCTAGAACATCATA+TGG | 0.433050 | tig0023526:+71931 | None:intergenic |
| CATCAAATCGTTGCCAACAT+TGG | 0.436263 | tig0023526:+73499 | None:intergenic |
| CGACGCTACTGAACTATTTG+TGG | 0.436499 | tig0023526:-72686 | Msa1409560:CDS |
| CAAATGAAGAAGAAAAGAAA+AGG | 0.439074 | tig0023526:-66105 | Msa1409560:CDS |
| TGGGCAAGCTGTGGACATAA+AGG | 0.440650 | tig0023526:-73274 | Msa1409560:CDS |
| GCTTTCTGAGCTCTGTCAGT+CGG | 0.442752 | tig0023526:+66294 | None:intergenic |
| TTGGGGATGAATTTCATCTT+CGG | 0.444831 | tig0023526:+73553 | None:intergenic |
| TCTAATTCAATCTATGCATC+CGG | 0.445513 | tig0023526:-73124 | Msa1409560:CDS |
| GGGACCTCCACCTCCTGCTA+TGG | 0.453715 | tig0023526:-72665 | Msa1409560:CDS |
| ATCAAATCGTTGCCAACATT+GGG | 0.455317 | tig0023526:+73500 | None:intergenic |
| TCGTCTACCATCTGCTCAGC+TGG | 0.457672 | tig0023526:+73051 | None:intergenic |
| TCACGGTCCCATGGCTTCCA+TGG | 0.458513 | tig0023526:+65935 | None:intergenic |
| GATCTCAACTTCCATTATCC+TGG | 0.470229 | tig0023526:+71960 | None:intergenic |
| GAAAACGGAGATACAGAGAT+AGG | 0.471626 | tig0023526:-73619 | Msa1409560:CDS |
| AATCAAACTCAAGCAAGAAC+AGG | 0.472401 | tig0023526:-69844 | Msa1409560:CDS |
| CTCTACCTTCCTTTGTGCCC+CGG | 0.473162 | tig0023526:+66343 | None:intergenic |
| ATCGGAATAGTGATGCCTCT+TGG | 0.473601 | tig0023526:+73589 | None:intergenic |
| CCGACGTCATCGCCGTGAAA+AGG | 0.473995 | tig0023526:-73705 | Msa1409560:CDS |
| GTCAGAATCGGAATCAGTGC+AGG | 0.475484 | tig0023526:+73748 | None:intergenic |
| AAAGTAGGGGAGGCTTTAGA+AGG | 0.478117 | tig0023526:+73162 | None:intergenic |
| TGCAATCGACCCAATTTAGC+CGG | 0.480956 | tig0023526:-66362 | Msa1409560:CDS |
| AGAAAGAGAGAGCAAGAGAA+AGG | 0.484486 | tig0023526:-73648 | Msa1409560:CDS |
| AGAAAAGAAAAGGGCTAGTA+CGG | 0.485895 | tig0023526:-66095 | Msa1409560:CDS |
| AACAGACAGATAAGGGAGAA+TGG | 0.486300 | tig0023526:-65970 | Msa1409560:CDS |
| TGTCTTTAGAGAAGCTGACT+TGG | 0.486345 | tig0023526:-72710 | Msa1409560:intron |
| CAAGTGGAGAATCTAATACT+TGG | 0.486812 | tig0023526:+65337 | None:intergenic |
| GACGCTACTGAACTATTTGT+GGG | 0.487780 | tig0023526:-72685 | Msa1409560:CDS |
| ACGGCGATGACGTCGGCGGC+GGG | 0.489635 | tig0023526:+73712 | None:intergenic |
| TTTATGTTGAGTTTGGAAAC+CGG | 0.492762 | tig0023526:+65286 | None:intergenic |
| CCAACAAGCTTCTTAGAGAT+CGG | 0.497048 | tig0023526:-65743 | Msa1409560:three_prime_UTR |
| GGATGCATAGATTGAATTAG+AGG | 0.498706 | tig0023526:+73126 | None:intergenic |
| GAAGCCATGGGACCGTGAAA+AGG | 0.505197 | tig0023526:-65930 | Msa1409560:CDS |
| GACGTCGGCGGCGGGAAGAG+TGG | 0.508300 | tig0023526:+73720 | None:intergenic |
| GTCCAAACAACAGACAGATA+AGG | 0.509600 | tig0023526:-65978 | Msa1409560:CDS |
| TTCATTTGAGGCTAGTGCAG+TGG | 0.509681 | tig0023526:+66120 | None:intergenic |
| GGCCAACAACATCTAAAGTA+GGG | 0.509774 | tig0023526:+73148 | None:intergenic |
| TGCAGGGAGAGGAAGAAGAA+GGG | 0.509825 | tig0023526:+73765 | None:intergenic |
| AGAATTGCCTGAAACATGTT+CGG | 0.511650 | tig0023526:-73076 | Msa1409560:CDS |
| GTGCAGGGAGAGGAAGAAGA+AGG | 0.514525 | tig0023526:+73764 | None:intergenic |
| TTATTTGGAAGCATACAATC+AGG | 0.519479 | tig0023526:-66143 | Msa1409560:CDS |
| ATGGATGACAACACTGCCTC+CGG | 0.520029 | tig0023526:-68250 | Msa1409560:CDS |
| CTTTGTGTAGCGGAAAGAAA+TGG | 0.521865 | tig0023526:-69874 | Msa1409560:intron |
| ACAGACAGATAAGGGAGAAT+GGG | 0.522824 | tig0023526:-65969 | Msa1409560:CDS |
| CTGACTCTTGATCGAATCAA+AGG | 0.524045 | tig0023526:+65810 | None:intergenic |
| TAGTGAAGATAGTATGTGTC+TGG | 0.524053 | tig0023526:-65450 | Msa1409560:three_prime_UTR |
| GTCAACATCCATGGAAGCCA+TGG | 0.524181 | tig0023526:-65943 | Msa1409560:CDS |
| GGGCCAACAACATCTAAAGT+AGG | 0.525057 | tig0023526:+73147 | None:intergenic |
| GCAATCGACCCAATTTAGCC+GGG | 0.525127 | tig0023526:-66361 | Msa1409560:CDS |
| TGGATCCCAAAAGAGATGAA+TGG | 0.525698 | tig0023526:-68269 | Msa1409560:CDS |
| GGGAGAGGAAGAAGAAGGGG+AGG | 0.531799 | tig0023526:+73769 | None:intergenic |
| ATGACTGAGTTTCCCAATGT+TGG | 0.532176 | tig0023526:-73512 | Msa1409560:CDS |
| GAAACCATAGCAGGAGGTGG+AGG | 0.534386 | tig0023526:+72661 | None:intergenic |
| CCTCAGGAGGTTCTGTCGAA+TGG | 0.534959 | tig0023526:+73028 | None:intergenic |
| TTTAGCCGGGGCACAAAGGA+AGG | 0.534999 | tig0023526:-66348 | Msa1409560:CDS |
| AATGGGTGGGTCAACATCCA+TGG | 0.535636 | tig0023526:-65952 | Msa1409560:CDS |
| ATCGGAATCAGTGCAGGGAG+AGG | 0.536711 | tig0023526:+73754 | None:intergenic |
| CGGGGCACAAAGGAAGGTAG+AGG | 0.537234 | tig0023526:-66342 | Msa1409560:CDS |
| GTGAAAAGGATCTGGGAGCT+GGG | 0.537777 | tig0023526:-65916 | Msa1409560:CDS |
| TTAATTCTGGAAACTTTCAA+AGG | 0.540263 | tig0023526:-65838 | Msa1409560:CDS |
| ACAGCACTTACTTTCCTCTC+CGG | 0.540963 | tig0023526:+68231 | None:intergenic |
| ATAAATGCTTGATTGGCTTG+TGG | 0.541658 | tig0023526:+70926 | None:intergenic |
| CTAATTCAATCTATGCATCC+GGG | 0.541924 | tig0023526:-73123 | Msa1409560:CDS |
| TTCGGAAGATTGGGAGTCAT+CGG | 0.542445 | tig0023526:+73571 | None:intergenic |
| TGTCACCCATTATTAGGGAG+AGG | 0.544032 | tig0023526:+73825 | None:intergenic |
| GGACCAACAGAATGATCCTC+AGG | 0.544639 | tig0023526:+73012 | None:intergenic |
| CTTAAATCTTAAGGAAAATG+GGG | 0.544839 | tig0023526:-73202 | Msa1409560:CDS |
| AGCAAAGAAGAGAAGAGAAG+AGG | 0.545589 | tig0023526:+73867 | None:intergenic |
| AAGCTCATCATCACCCTCCA+TGG | 0.546264 | tig0023526:+68314 | None:intergenic |
| TGTTGGCAACGATTTGATGC+AGG | 0.547465 | tig0023526:-73495 | Msa1409560:intron |
| CCAATTTAGCCGGGGCACAA+AGG | 0.548245 | tig0023526:-66352 | Msa1409560:CDS |
| AGAGTTACAAGATCCAGAAA+AGG | 0.552154 | tig0023526:-70882 | Msa1409560:intron |
| AAATGAAGAAGAAAAGAAAA+GGG | 0.552960 | tig0023526:-66104 | Msa1409560:CDS |
| AGAGTGGTCGGAGTCAGAAT+CGG | 0.555774 | tig0023526:+73736 | None:intergenic |
| GTTTCAGGCAATTCTGCAGA+AGG | 0.558024 | tig0023526:+73084 | None:intergenic |
| ATCTATGACAGGTATATCCA+TGG | 0.558749 | tig0023526:-68331 | Msa1409560:CDS |
| GGCACAGACAGAGGTTAAAG+TGG | 0.559143 | tig0023526:-68289 | Msa1409560:CDS |
| GACAGATAAGGGAGAATGGG+TGG | 0.563720 | tig0023526:-65966 | Msa1409560:CDS |
| TTCGGTTCCAGCTGAGCAGA+TGG | 0.566408 | tig0023526:-73058 | Msa1409560:CDS |
| TCAGAAACCATAGCAGGAGG+TGG | 0.569747 | tig0023526:+72658 | None:intergenic |
| CCTCCTGAGGATCATTCTGT+TGG | 0.570163 | tig0023526:-73015 | Msa1409560:CDS |
| TGGGACCGTGAAAAGGATCT+GGG | 0.570402 | tig0023526:-65923 | Msa1409560:CDS |
| GCAGGGAGAGGAAGAAGAAG+GGG | 0.572771 | tig0023526:+73766 | None:intergenic |
| AAAGTAAAACTTGATGCAGA+AGG | 0.575059 | tig0023526:-65887 | Msa1409560:CDS |
| GATTTCTAGGAATCTATGAC+AGG | 0.575674 | tig0023526:-68342 | Msa1409560:intron |
| TATTTGATTAACTGGTTGTG+TGG | 0.576363 | tig0023526:-65417 | Msa1409560:three_prime_UTR |
| CTCAACATAAATTGTTGACG+TGG | 0.581511 | tig0023526:-65274 | Msa1409560:three_prime_UTR |
| TAACTCCTAGAACATCATAT+GGG | 0.583750 | tig0023526:+71932 | None:intergenic |
| GAAACTCAGTCATCATTTCA+CGG | 0.587115 | tig0023526:+73522 | None:intergenic |
| TCGGCGGCGGGAAGAGTGGT+CGG | 0.593919 | tig0023526:+73724 | None:intergenic |
| GCAGCGAGTAACTCAGCAGA+CGG | 0.594089 | tig0023526:+72868 | None:intergenic |
| TGTTCATGTATCAGGTCACC+AGG | 0.595368 | tig0023526:-71978 | Msa1409560:intron |
| GGATCAGCTCGATCATTCCC+CGG | 0.601848 | tig0023526:+73105 | None:intergenic |
| TGATGCAGAAGGCATGTCTG+AGG | 0.604699 | tig0023526:-65876 | Msa1409560:CDS |
| GATTGCATACTCACACCACC+AGG | 0.607689 | tig0023526:+66378 | None:intergenic |
| TCTGCTTCAGAAACCATAGC+AGG | 0.608257 | tig0023526:+72652 | None:intergenic |
| GTTAACCATAATATGTCCGA+TGG | 0.610852 | tig0023526:-71913 | Msa1409560:CDS |
| GCACTGTGGAGAAGATCTCA+AGG | 0.614300 | tig0023526:-69716 | Msa1409560:CDS |
| GTATTTATGTTTGTTGCACG+TGG | 0.615446 | tig0023526:-65488 | Msa1409560:three_prime_UTR |
| TCAACATCCATGGAAGCCAT+GGG | 0.616582 | tig0023526:-65942 | Msa1409560:CDS |
| GATGCAGAAGGCATGTCTGA+GGG | 0.618320 | tig0023526:-65875 | Msa1409560:CDS |
| ACTCAGCAGACGGCATTGCA+GGG | 0.621471 | tig0023526:+72878 | None:intergenic |
| GATGCATAGATTGAATTAGA+GGG | 0.622191 | tig0023526:+73127 | None:intergenic |
| AGGTTGAATCGCGCGAACGA+CGG | 0.623524 | tig0023526:+73789 | None:intergenic |
| AACAACATCTAAAGTAGGGG+AGG | 0.624738 | tig0023526:+73152 | None:intergenic |
| TAGTACGGATGCAGATTTGG+TGG | 0.629469 | tig0023526:-66080 | Msa1409560:CDS |
| ATTTCACGGAGTGCAGTTTG+GGG | 0.630086 | tig0023526:+73536 | None:intergenic |
| TGAGCTTCTGGCACAGACAG+AGG | 0.634480 | tig0023526:-68298 | Msa1409560:CDS |
| GATTGATAATGGGCAAGCTG+TGG | 0.639168 | tig0023526:-73283 | Msa1409560:CDS |
| GCACTTACTTTCCTCTCCGG+AGG | 0.639545 | tig0023526:+68234 | None:intergenic |
| TTTCTGAGCTCTGTCAGTCG+GGG | 0.643544 | tig0023526:+66296 | None:intergenic |
| TTTCACGGCGATGACGTCGG+CGG | 0.644681 | tig0023526:+73708 | None:intergenic |
| GCCAACAACATCTAAAGTAG+GGG | 0.650532 | tig0023526:+73149 | None:intergenic |
| ATGACAGGTATATCCATGGA+GGG | 0.653127 | tig0023526:-68327 | Msa1409560:CDS |
| ACAGATAAGGGAGAATGGGT+GGG | 0.654753 | tig0023526:-65965 | Msa1409560:CDS |
| ATTTATGCACTTCAGCCTGG+TGG | 0.659203 | tig0023526:-66393 | Msa1409560:intron |
| TGCTGCTGCCAAATTAACAG+AGG | 0.665073 | tig0023526:-72848 | Msa1409560:CDS |
| TCAGAATCGGAATCAGTGCA+GGG | 0.665193 | tig0023526:+73749 | None:intergenic |
| TGACAACACTGCCTCCGGAG+AGG | 0.670844 | tig0023526:-68245 | Msa1409560:CDS |
| TAATTCAATCTATGCATCCG+GGG | 0.679067 | tig0023526:-73122 | Msa1409560:CDS |
| CAATCGACCCAATTTAGCCG+GGG | 0.682202 | tig0023526:-66360 | Msa1409560:CDS |
| TATGACAGGTATATCCATGG+AGG | 0.686974 | tig0023526:-68328 | Msa1409560:CDS |
| GCTTCAGAAACCATAGCAGG+AGG | 0.687058 | tig0023526:+72655 | None:intergenic |
| AAAAGGATCTGGGAGCTGGG+AGG | 0.697253 | tig0023526:-65913 | Msa1409560:CDS |
| TGAACTTAAAGTCATGCGAG+AGG | 0.697569 | tig0023526:-69741 | Msa1409560:CDS |
| CCAACAGAATGATCCTCAGG+AGG | 0.706613 | tig0023526:+73015 | None:intergenic |
| CCATTCGACAGAACCTCCTG+AGG | 0.709084 | tig0023526:-73028 | Msa1409560:CDS |
| GAGATAGGAGAAAATCCAAG+AGG | 0.709703 | tig0023526:-73604 | Msa1409560:CDS |
| ACTTGGATCCATATGCAGTG+TGG | 0.720991 | tig0023526:+65354 | None:intergenic |
| TCATGCGAGAGGCTGCACTG+TGG | 0.739848 | tig0023526:-69730 | Msa1409560:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | ATTTTAAAAATTTAATTTTT+AGG | - | tig0023526:65737-65756 | Msa1409560:three_prime_UTR | 0.0% |
| !!! | TTTTAAAAATTTAATTTTTA+GGG | - | tig0023526:65738-65757 | Msa1409560:three_prime_UTR | 0.0% |
| !! | AAAAAAAAAAACTCAATTTA+GGG | + | tig0023526:65813-65832 | None:intergenic | 10.0% |
| !! | AAAAAAAAAAAACTCAATTT+AGG | + | tig0023526:65814-65833 | None:intergenic | 10.0% |
| !!! | AAGTATTTTTTAATGATAAT+TGG | - | tig0023526:66252-66271 | Msa1409560:intron | 10.0% |
| !!! | AAAGTTTTTAAAATAATCAT+AGG | - | tig0023526:67767-67786 | Msa1409560:intron | 10.0% |
| !! | AGAATACAAATATTAATATT+TGG | - | tig0023526:70364-70383 | Msa1409560:intron | 10.0% |
| !!! | TTTTTAAAAAAAAAAAACTC+TGG | - | tig0023526:72741-72760 | Msa1409560:intron | 10.0% |
| !!! | AGTTTTTTTTTTTTAGCAAT+TGG | - | tig0023526:65820-65839 | Msa1409560:exon | 15.0% |
| !!! | ATTTATTTTGTAATTGAATG+TGG | - | tig0023526:67166-67185 | Msa1409560:intron | 15.0% |
| !! | TCAATAAAATAAACAGATAA+AGG | + | tig0023526:67321-67340 | None:intergenic | 15.0% |
| !!! | TTTAAAATGAGGTAAAATAA+GGG | + | tig0023526:67728-67747 | None:intergenic | 15.0% |
| !!! | TTTTAAAATGAGGTAAAATA+AGG | + | tig0023526:67729-67748 | None:intergenic | 15.0% |
| !! | TAATTTAATAAATGCTTGAT+TGG | + | tig0023526:68268-68287 | None:intergenic | 15.0% |
| !! | ATTTGAGTAATTAGTAAATT+AGG | - | tig0023526:69078-69097 | Msa1409560:intron | 15.0% |
| !! | TTTGAGTAATTAGTAAATTA+GGG | - | tig0023526:69079-69098 | Msa1409560:intron | 15.0% |
| !!! | TTGTTTAATTTCAATTAACA+AGG | - | tig0023526:69279-69298 | Msa1409560:intron | 15.0% |
| !! | GATATTATGTTAGTAATAAA+AGG | - | tig0023526:69733-69752 | Msa1409560:CDS | 15.0% |
| !! | TTATAAGTTATAACATCTAT+TGG | + | tig0023526:70236-70255 | None:intergenic | 15.0% |
| !! | ATAGATGTTATAACTTATAA+AGG | - | tig0023526:70236-70255 | Msa1409560:intron | 15.0% |
| !! | ATACAAATATTAATATTTGG+AGG | - | tig0023526:70367-70386 | Msa1409560:intron | 15.0% |
| !! | GATTAATGATTCTTAAAAAA+AGG | - | tig0023526:70775-70794 | Msa1409560:intron | 15.0% |
| !! | CTATTATATATCATATACAA+GGG | + | tig0023526:71047-71066 | None:intergenic | 15.0% |
| !! | TCTATTATATATCATATACA+AGG | + | tig0023526:71048-71067 | None:intergenic | 15.0% |
| !!! | ATTCGTTTCTATTAAATTTT+GGG | + | tig0023526:71783-71802 | None:intergenic | 15.0% |
| !!! | AATTCGTTTCTATTAAATTT+TGG | + | tig0023526:71784-71803 | None:intergenic | 15.0% |
| !!! | TAAGAAAAGTGTATAAATAA+AGG | - | tig0023526:72373-72392 | Msa1409560:intron | 15.0% |
| !!! | AAGAAAAGTGTATAAATAAA+GGG | - | tig0023526:72374-72393 | Msa1409560:intron | 15.0% |
| !! | TATTTAGTGTTATATTGTAT+TGG | - | tig0023526:72438-72457 | Msa1409560:intron | 15.0% |
| !! | ATTTAGTGTTATATTGTATT+GGG | - | tig0023526:72439-72458 | Msa1409560:intron | 15.0% |
| !! | TAAGTATATATTTGATTAAC+TGG | - | tig0023526:73759-73778 | Msa1409560:CDS | 15.0% |
| !! | TTATTGCAAATGATTGATAA+TGG | - | tig0023526:65890-65909 | Msa1409560:CDS | 20.0% |
| !!! | TATTGCAAATGATTGATAAT+GGG | - | tig0023526:65891-65910 | Msa1409560:CDS | 20.0% |
| !! | TTTCATTTCCTTAAATCTTA+AGG | - | tig0023526:65973-65992 | Msa1409560:CDS | 20.0% |
| !! | AACAAAATTACTAAAGAGAA+TGG | + | tig0023526:66211-66230 | None:intergenic | 20.0% |
| !!! | TTAACTTGTTTTTTATTTGC+AGG | - | tig0023526:66275-66294 | Msa1409560:intron | 20.0% |
| !!! | TAACTTGTTTTTTATTTGCA+GGG | - | tig0023526:66276-66295 | Msa1409560:intron | 20.0% |
| !! | AAAAAAACACATTCAGAAAT+CGG | + | tig0023526:66381-66400 | None:intergenic | 20.0% |
| !! | TTCAAGTGTTAAAGTAAAAT+TGG | - | tig0023526:66634-66653 | Msa1409560:intron | 20.0% |
| !! | TCAAGTGTTAAAGTAAAATT+GGG | - | tig0023526:66635-66654 | Msa1409560:intron | 20.0% |
| !! | CATGATAAAGAACTTTAATT+TGG | - | tig0023526:66713-66732 | Msa1409560:intron | 20.0% |
| !!! | ACATGTTTTTGTTTTTGTTA+AGG | - | tig0023526:66876-66895 | Msa1409560:intron | 20.0% |
| !! | TTGTTAAGGATATAATAGTT+TGG | - | tig0023526:66890-66909 | Msa1409560:intron | 20.0% |
| !!! | TTTTATTGTCTGTTTATGTT+TGG | - | tig0023526:66984-67003 | Msa1409560:intron | 20.0% |
| !! | ACAGTCTTAATAACTTATTT+GGG | + | tig0023526:67482-67501 | None:intergenic | 20.0% |
| !!! | ATGTTATAAAGAAGTATTCT+TGG | - | tig0023526:67574-67593 | Msa1409560:intron | 20.0% |
| !!! | TGTTATAAAGAAGTATTCTT+GGG | - | tig0023526:67575-67594 | Msa1409560:intron | 20.0% |
| !! | TTAAAATGAGGTAAAATAAG+GGG | + | tig0023526:67727-67746 | None:intergenic | 20.0% |
| !! | ATCGTTATAATATCATGTTA+TGG | - | tig0023526:67918-67937 | Msa1409560:intron | 20.0% |
| !!! | GTTACTTTATTTATACCTTT+AGG | - | tig0023526:68426-68445 | Msa1409560:intron | 20.0% |
| !! | AGATAATTAGAAATTGAACT+AGG | - | tig0023526:68560-68579 | Msa1409560:intron | 20.0% |
| !! | GATAATTAGAAATTGAACTA+GGG | - | tig0023526:68561-68580 | Msa1409560:intron | 20.0% |
| !!! | CTTTATTTTATCTTTCGTTA+TGG | + | tig0023526:68691-68710 | None:intergenic | 20.0% |
| !! | AATTATAAGTCCTAGATAAT+AGG | + | tig0023526:68908-68927 | None:intergenic | 20.0% |
| !! | TTTGATGTATAATGTTGAAA+GGG | + | tig0023526:68953-68972 | None:intergenic | 20.0% |
| !! | ATTTGATGTATAATGTTGAA+AGG | + | tig0023526:68954-68973 | None:intergenic | 20.0% |
| !!! | TTATTCATTTTCGTGTATAA+AGG | - | tig0023526:69598-69617 | Msa1409560:intron | 20.0% |
| !!! | TATTCATTTTCGTGTATAAA+GGG | - | tig0023526:69599-69618 | Msa1409560:intron | 20.0% |
| !! | GTTGTAAAAAACATATTTAG+AGG | - | tig0023526:70389-70408 | Msa1409560:intron | 20.0% |
| !! | AACAAAGAAAGAATAAAAGA+AGG | + | tig0023526:70513-70532 | None:intergenic | 20.0% |
| !! | TCATTAATCCATATACAAAA+GGG | + | tig0023526:70764-70783 | None:intergenic | 20.0% |
| !! | ATCATTAATCCATATACAAA+AGG | + | tig0023526:70765-70784 | None:intergenic | 20.0% |
| !! | ATTGTATAACTCTATTGTAT+AGG | + | tig0023526:71103-71122 | None:intergenic | 20.0% |
| !! | CAATAGAGTTATACAATATT+TGG | - | tig0023526:71106-71125 | Msa1409560:intron | 20.0% |
| !!! | TATTGAATTTTGGAATTTTC+TGG | - | tig0023526:71143-71162 | Msa1409560:intron | 20.0% |
| !!! | ATTGAATTTTGGAATTTTCT+GGG | - | tig0023526:71144-71163 | Msa1409560:intron | 20.0% |
| !! | TATGTTGCTAAATATTTGAA+AGG | - | tig0023526:71325-71344 | Msa1409560:intron | 20.0% |
| !! | ACGAACAAAAAACATATTAA+AGG | + | tig0023526:71356-71375 | None:intergenic | 20.0% |
| !! | TATTATATGGATCATTTCAA+GGG | + | tig0023526:71419-71438 | None:intergenic | 20.0% |
| !! | ATATTATATGGATCATTTCA+AGG | + | tig0023526:71420-71439 | None:intergenic | 20.0% |
| !!! | TTCGTTTCTATTAAATTTTG+GGG | + | tig0023526:71782-71801 | None:intergenic | 20.0% |
| !!! | AGAAAAGTGTATAAATAAAG+GGG | - | tig0023526:72375-72394 | Msa1409560:intron | 20.0% |
| !! | AAAGTGGAATATATTGTATT+GGG | - | tig0023526:72398-72417 | Msa1409560:intron | 20.0% |
| !!! | GACACTTTTTTTTAGAAAAT+GGG | - | tig0023526:72508-72527 | Msa1409560:intron | 20.0% |
| !! | GATAGAGTATAATACATATT+TGG | - | tig0023526:72572-72591 | Msa1409560:intron | 20.0% |
| !!! | AAAAAAAACTCTGGATATTT+TGG | - | tig0023526:72750-72769 | Msa1409560:intron | 20.0% |
| !! | AAATGAAGAAGAAAAGAAAA+GGG | - | tig0023526:73080-73099 | Msa1409560:CDS | 20.0% |
| !!! | ACTGTTTTACTAATATAATC+CGG | - | tig0023526:73879-73898 | Msa1409560:five_prime_UTR | 20.0% |
| ! | AGAGAAAGGAAAAAAGAAAA+CGG | - | tig0023526:65550-65569 | Msa1409560:three_prime_UTR | 25.0% |
| ! | TCCTTAAATCTTAAGGAAAA+TGG | - | tig0023526:65980-65999 | Msa1409560:CDS | 25.0% |
| ! | CCTTAAATCTTAAGGAAAAT+GGG | - | tig0023526:65981-66000 | Msa1409560:CDS | 25.0% |
| ! | CTTAAATCTTAAGGAAAATG+GGG | - | tig0023526:65982-66001 | Msa1409560:CDS | 25.0% |
| ! | AAATTGGGTTTAATGATTGA+TGG | - | tig0023526:66650-66669 | Msa1409560:intron | 25.0% |
| !!! | GTAAGTGTAGATTTTATTTG+AGG | - | tig0023526:66688-66707 | Msa1409560:intron | 25.0% |
| !!! | GATAAAGAACTTTAATTTGG+TGG | - | tig0023526:66716-66735 | Msa1409560:intron | 25.0% |
| !!! | ATTTTGATGATGCATTAAGT+TGG | - | tig0023526:66834-66853 | Msa1409560:intron | 25.0% |
| ! | AACAAAAACAAAAACATGTC+TGG | + | tig0023526:66875-66894 | None:intergenic | 25.0% |
| ! | TCAAATGATCAATTGTCAAA+AGG | + | tig0023526:67015-67034 | None:intergenic | 25.0% |
| ! | TCTCACAAAAAGAATTATCA+GGG | - | tig0023526:67079-67098 | Msa1409560:intron | 25.0% |
| ! | TAATTCAGTAATGAATCAAC+AGG | + | tig0023526:67136-67155 | None:intergenic | 25.0% |
| !! | CTTTTTCTTTATGTTACCAT+CGG | + | tig0023526:67290-67309 | None:intergenic | 25.0% |
| ! | ATATACTAATTAAGTGTGCT+GGG | + | tig0023526:67418-67437 | None:intergenic | 25.0% |
| ! | CACAGTCTTAATAACTTATT+TGG | + | tig0023526:67483-67502 | None:intergenic | 25.0% |
| !!! | ATTCTTGTTGATAGTATTTC+CGG | - | tig0023526:67829-67848 | Msa1409560:intron | 25.0% |
| ! | AAGGCATATATTTATATTCC+CGG | + | tig0023526:67851-67870 | None:intergenic | 25.0% |
| ! | AAGATTTACACAAGAACTTA+GGG | + | tig0023526:67885-67904 | None:intergenic | 25.0% |
| ! | GTAAAATCATGTCTTAAGTT+TGG | + | tig0023526:67971-67990 | None:intergenic | 25.0% |
| !! | TGATTTTACTGCAGTAAATA+AGG | - | tig0023526:67982-68001 | Msa1409560:intron | 25.0% |
| !! | ATTGAAGTTAATGTAGCTTT+TGG | - | tig0023526:68351-68370 | Msa1409560:intron | 25.0% |
| ! | TACTAATTACTCAAATTCAC+AGG | + | tig0023526:69074-69093 | None:intergenic | 25.0% |
| ! | ATTTGAACTTACTTGTCTAA+TGG | - | tig0023526:69377-69396 | Msa1409560:intron | 25.0% |
| ! | CTATCACTCATAGTAATATT+GGG | + | tig0023526:69625-69644 | None:intergenic | 25.0% |
| ! | AAAAATTAGAGTTAGGACTT+AGG | - | tig0023526:69661-69680 | Msa1409560:intron | 25.0% |
| ! | ACATTAAAACTTGTGATGAT+TGG | - | tig0023526:69756-69775 | Msa1409560:intron | 25.0% |
| ! | ATGCAAAATGCAAATTATCT+TGG | - | tig0023526:69899-69918 | Msa1409560:intron | 25.0% |
| ! | TTATCTTGGAAGATGTTATT+AGG | - | tig0023526:69913-69932 | Msa1409560:intron | 25.0% |
| ! | TGATTAGTGTTTATAAAGAG+TGG | + | tig0023526:69979-69998 | None:intergenic | 25.0% |
| !!! | ACCATATTGGGTTTTAATAT+TGG | - | tig0023526:70117-70136 | Msa1409560:intron | 25.0% |
| ! | ACCAATATTAAAACCCAATA+TGG | + | tig0023526:70121-70140 | None:intergenic | 25.0% |
| ! | CAGATAAAGTTTATAAAGAG+TGG | + | tig0023526:70186-70205 | None:intergenic | 25.0% |
| ! | AACACTATCACTAAATTATC+AGG | + | tig0023526:70624-70643 | None:intergenic | 25.0% |
| ! | ATGATTCTTAAAAAAAGGAG+CGG | - | tig0023526:70780-70799 | Msa1409560:intron | 25.0% |
| ! | TTTCTTACTTCAACTACATT+TGG | + | tig0023526:71078-71097 | None:intergenic | 25.0% |
| !! | GTTATACAATATTTGGTGAA+TGG | - | tig0023526:71113-71132 | Msa1409560:intron | 25.0% |
| !!! | AGCTTAGCTTTTTATAGAAT+TGG | - | tig0023526:71174-71193 | Msa1409560:intron | 25.0% |
| !! | TTTATCTTGCGTTTTCTTTT+TGG | - | tig0023526:71282-71301 | Msa1409560:intron | 25.0% |
| !! | TTATCTTGCGTTTTCTTTTT+GGG | - | tig0023526:71283-71302 | Msa1409560:intron | 25.0% |
| ! | ATTTCAAGGGAAACATTATA+TGG | + | tig0023526:71406-71425 | None:intergenic | 25.0% |
| ! | ATATTACAGGAACTAAAACA+AGG | + | tig0023526:71498-71517 | None:intergenic | 25.0% |
| !!! | AGTTGAAGGAAAAGTTTTAT+TGG | - | tig0023526:71956-71975 | Msa1409560:CDS | 25.0% |
| ! | GAAAGTGGAATATATTGTAT+TGG | - | tig0023526:72397-72416 | Msa1409560:intron | 25.0% |
| !! | TTGAAATGAGTCAGTTATTT+TGG | - | tig0023526:72485-72504 | Msa1409560:intron | 25.0% |
| !!! | TGAAATGAGTCAGTTATTTT+GGG | - | tig0023526:72486-72505 | Msa1409560:intron | 25.0% |
| !!! | GGACACTTTTTTTTAGAAAA+TGG | - | tig0023526:72507-72526 | Msa1409560:intron | 25.0% |
| !!! | TTTCCACCTTTTTTGAAAAA+GGG | + | tig0023526:72668-72687 | None:intergenic | 25.0% |
| !!! | TTTTCCACCTTTTTTGAAAA+AGG | + | tig0023526:72669-72688 | None:intergenic | 25.0% |
| !! | CAATGATTACAATAGCTTTA+TGG | - | tig0023526:72995-73014 | Msa1409560:intron | 25.0% |
| !! | TTTCTTTTCTTCTTCATTTG+AGG | + | tig0023526:73079-73098 | None:intergenic | 25.0% |
| ! | CAAATGAAGAAGAAAAGAAA+AGG | - | tig0023526:73079-73098 | Msa1409560:CDS | 25.0% |
| ! | TTATCTTCAAGGTTTAATTC+TGG | - | tig0023526:73333-73352 | Msa1409560:intron | 25.0% |
| !! | TTAATTCTGGAAACTTTCAA+AGG | - | tig0023526:73346-73365 | Msa1409560:intron | 25.0% |
| ! | ACTGATAAATGTGTCAAAAA+GGG | + | tig0023526:73558-73577 | None:intergenic | 25.0% |
| ! | TACTGATAAATGTGTCAAAA+AGG | + | tig0023526:73559-73578 | None:intergenic | 25.0% |
| !! | TTTTTGACACATTTATCAGT+AGG | - | tig0023526:73558-73577 | Msa1409560:CDS | 25.0% |
| ! | TCAACAATTTATGTTGAGTT+TGG | + | tig0023526:73908-73927 | None:intergenic | 25.0% |
| AATTTCATCTTCGGAAGATT+GGG | + | tig0023526:65625-65644 | None:intergenic | 30.0% | |
| ! | CCCATTTTCCTTAAGATTTA+AGG | + | tig0023526:65984-66003 | None:intergenic | 30.0% |
| GATGCATAGATTGAATTAGA+GGG | + | tig0023526:66060-66079 | None:intergenic | 30.0% | |
| TCTAATTCAATCTATGCATC+CGG | - | tig0023526:66060-66079 | Msa1409560:CDS | 30.0% | |
| !!! | TTTTTTATTTGCAGGGTGAT+TGG | - | tig0023526:66283-66302 | Msa1409560:intron | 30.0% |
| ! | TTGTTGAATGTTTTCTGACT+CGG | - | tig0023526:66404-66423 | Msa1409560:intron | 30.0% |
| !! | AATCTCACTTGTTATCGATT+AGG | - | tig0023526:66592-66611 | Msa1409560:intron | 30.0% |
| ATACAGTTCACTTCAACTTA+AGG | + | tig0023526:66782-66801 | None:intergenic | 30.0% | |
| ! | AATTCTTTTTGTGAGAGAGA+GGG | + | tig0023526:67075-67094 | None:intergenic | 30.0% |
| ! | TAATTCTTTTTGTGAGAGAG+AGG | + | tig0023526:67076-67095 | None:intergenic | 30.0% |
| CTCTCACAAAAAGAATTATC+AGG | - | tig0023526:67078-67097 | Msa1409560:intron | 30.0% | |
| CTCACAAAAAGAATTATCAG+GGG | - | tig0023526:67080-67099 | Msa1409560:intron | 30.0% | |
| TCACAAAAAGAATTATCAGG+GGG | - | tig0023526:67081-67100 | Msa1409560:intron | 30.0% | |
| TAACTCCTAGAACATCATAT+GGG | + | tig0023526:67255-67274 | None:intergenic | 30.0% | |
| TTAACTCCTAGAACATCATA+TGG | + | tig0023526:67256-67275 | None:intergenic | 30.0% | |
| TATACTAATTAAGTGTGCTG+GGG | + | tig0023526:67417-67436 | None:intergenic | 30.0% | |
| CATATACTAATTAAGTGTGC+TGG | + | tig0023526:67419-67438 | None:intergenic | 30.0% | |
| CAGCACACTTAATTAGTATA+TGG | - | tig0023526:67417-67436 | Msa1409560:intron | 30.0% | |
| GAAAAACTGAAGAATCATTC+AGG | + | tig0023526:67449-67468 | None:intergenic | 30.0% | |
| TAATAACTTATTTGGGCCTT+AGG | + | tig0023526:67475-67494 | None:intergenic | 30.0% | |
| ACTTACCATACAATCTTTGT+TGG | - | tig0023526:67800-67819 | Msa1409560:intron | 30.0% | |
| CTTACCATACAATCTTTGTT+GGG | - | tig0023526:67801-67820 | Msa1409560:intron | 30.0% | |
| TATTCCCAACAAAGATTGTA+TGG | + | tig0023526:67808-67827 | None:intergenic | 30.0% | |
| !! | TTCTTGTTGATAGTATTTCC+GGG | - | tig0023526:67830-67849 | Msa1409560:intron | 30.0% |
| AGATTTACACAAGAACTTAG+GGG | + | tig0023526:67884-67903 | None:intergenic | 30.0% | |
| GAAGATTTACACAAGAACTT+AGG | + | tig0023526:67886-67905 | None:intergenic | 30.0% | |
| TTGTATGATGGCATAATACT+AGG | + | tig0023526:68132-68151 | None:intergenic | 30.0% | |
| TGTCAAATGTAGTTGTATGA+TGG | + | tig0023526:68144-68163 | None:intergenic | 30.0% | |
| !!! | TGTCTCTTTTGATTTCTCTT+AGG | - | tig0023526:68190-68209 | Msa1409560:intron | 30.0% |
| !!! | TTTTGATTTCTCTTAGGTAC+TGG | - | tig0023526:68196-68215 | Msa1409560:intron | 30.0% |
| TAATAAACAAATCTCCTGCA+AGG | + | tig0023526:68332-68351 | None:intergenic | 30.0% | |
| ! | AAGTTAATGTAGCTTTTGGT+TGG | - | tig0023526:68355-68374 | Msa1409560:intron | 30.0% |
| !! | CTTTTGGTTGGATTTTACAT+TGG | - | tig0023526:68367-68386 | Msa1409560:intron | 30.0% |
| AATTAGAAATTGAACTAGGG+AGG | - | tig0023526:68564-68583 | Msa1409560:intron | 30.0% | |
| !! | AGTTATTTTCGTAAGCTATC+TGG | - | tig0023526:68736-68755 | Msa1409560:intron | 30.0% |
| TAGGACTTTGGATAGAATAA+GGG | + | tig0023526:68889-68908 | None:intergenic | 30.0% | |
| ATAGGACTTTGGATAGAATA+AGG | + | tig0023526:68890-68909 | None:intergenic | 30.0% | |
| TATCCAAAGTCCTATTATCT+AGG | - | tig0023526:68895-68914 | Msa1409560:intron | 30.0% | |
| AAAGGGTCAAAACAAAAAAG+AGG | + | tig0023526:68936-68955 | None:intergenic | 30.0% | |
| TAGCTGGAATCATTTGAAAA+AGG | - | tig0023526:69109-69128 | Msa1409560:intron | 30.0% | |
| ATGAAAGGAAGTAACGATAT+GGG | + | tig0023526:69158-69177 | None:intergenic | 30.0% | |
| ! | GCTTAGTTTGACATTAAACA+TGG | - | tig0023526:69210-69229 | Msa1409560:intron | 30.0% |
| CCTATCACTCATAGTAATAT+TGG | + | tig0023526:69626-69645 | None:intergenic | 30.0% | |
| CCAATATTACTATGAGTGAT+AGG | - | tig0023526:69623-69642 | Msa1409560:intron | 30.0% | |
| CAGAGGAAAAAATTAGAGTT+AGG | - | tig0023526:69654-69673 | Msa1409560:intron | 30.0% | |
| ! | AATAAGCTCTGATACCATAT+TGG | - | tig0023526:70104-70123 | Msa1409560:intron | 30.0% |
| ! | ATAAGCTCTGATACCATATT+GGG | - | tig0023526:70105-70124 | Msa1409560:intron | 30.0% |
| TTTATCTGACCTTATCTATG+TGG | - | tig0023526:70198-70217 | Msa1409560:intron | 30.0% | |
| TTATCTGACCTTATCTATGT+GGG | - | tig0023526:70199-70218 | Msa1409560:intron | 30.0% | |
| CTCTATTAACGACTATAATG+AGG | + | tig0023526:70471-70490 | None:intergenic | 30.0% | |
| CTCATTATAGTCGTTAATAG+AGG | - | tig0023526:70469-70488 | Msa1409560:intron | 30.0% | |
| AAACGTTAGATCATCACAAT+AGG | + | tig0023526:70537-70556 | None:intergenic | 30.0% | |
| !! | AGTGTTTAATTTGTCGTGTT+TGG | - | tig0023526:70638-70657 | Msa1409560:intron | 30.0% |
| ! | ATAACATGCCCTTTTGTATA+TGG | - | tig0023526:70753-70772 | Msa1409560:intron | 30.0% |
| ! | TACTTTGCTATCTGATTTCT+AGG | - | tig0023526:70829-70848 | Msa1409560:intron | 30.0% |
| !! | TAAGTGCTGTCAATTACTTT+TGG | - | tig0023526:70966-70985 | Msa1409560:CDS | 30.0% |
| ! | ATACAATATTTGGTGAATGG+TGG | - | tig0023526:71116-71135 | Msa1409560:intron | 30.0% |
| ! | TACAATATTTGGTGAATGGT+GGG | - | tig0023526:71117-71136 | Msa1409560:intron | 30.0% |
| !! | TTTATAGAATTGGTCTTGAC+AGG | - | tig0023526:71184-71203 | Msa1409560:intron | 30.0% |
| TTAGAAGTTGTAATCTAGCT+TGG | - | tig0023526:71239-71258 | Msa1409560:intron | 30.0% | |
| ! | TAGAAGTTGTAATCTAGCTT+GGG | - | tig0023526:71240-71259 | Msa1409560:intron | 30.0% |
| ! | AAGGAAAAAAGTACAGTAGA+AGG | + | tig0023526:71479-71498 | None:intergenic | 30.0% |
| TATCATATGTACGAAACTGT+TGG | - | tig0023526:71545-71564 | Msa1409560:intron | 30.0% | |
| ATCTATATTCTATCCGATGT+GGG | + | tig0023526:71685-71704 | None:intergenic | 30.0% | |
| TATCTATATTCTATCCGATG+TGG | + | tig0023526:71686-71705 | None:intergenic | 30.0% | |
| CTTGAGAAGAGTTTATAAAG+AGG | - | tig0023526:71711-71730 | Msa1409560:intron | 30.0% | |
| ACTATTGAATTCAAGCTGAA+TGG | - | tig0023526:71881-71900 | Msa1409560:intron | 30.0% | |
| TCGTATCACATAAAACATCT+GGG | + | tig0023526:71924-71943 | None:intergenic | 30.0% | |
| TTCGTATCACATAAAACATC+TGG | + | tig0023526:71925-71944 | None:intergenic | 30.0% | |
| TTATTGGACAACTGTAAGAT+AGG | - | tig0023526:71972-71991 | Msa1409560:intron | 30.0% | |
| ! | TAGTGAGTTGGATAGAAATA+TGG | - | tig0023526:72300-72319 | Msa1409560:intron | 30.0% |
| TGTATAAATAAAGGGGAAAG+TGG | - | tig0023526:72382-72401 | Msa1409560:intron | 30.0% | |
| !!! | TGGATATTTTGGTAAATGAC+TGG | - | tig0023526:72761-72780 | Msa1409560:intron | 30.0% |
| CTTTCAGCTATAATGTGATT+TGG | - | tig0023526:72933-72952 | Msa1409560:intron | 30.0% | |
| !! | CTATAATGTGATTTGGTTGA+TGG | - | tig0023526:72940-72959 | Msa1409560:intron | 30.0% |
| AAGCTATTGTAATCATTGAG+TGG | + | tig0023526:72993-73012 | None:intergenic | 30.0% | |
| ! | GATTTTACACTGCAGTTATT+TGG | - | tig0023526:73026-73045 | Msa1409560:CDS | 30.0% |
| ! | TTATTTGGAAGCATACAATC+AGG | - | tig0023526:73041-73060 | Msa1409560:CDS | 30.0% |
| AAAGTAAAACTTGATGCAGA+AGG | - | tig0023526:73297-73316 | Msa1409560:CDS | 30.0% | |
| TTCTGGATTAATTCTATCAG+AGG | - | tig0023526:73526-73545 | Msa1409560:CDS | 30.0% | |
| TATTTGATTAACTGGTTGTG+TGG | - | tig0023526:73767-73786 | Msa1409560:CDS | 30.0% | |
| TTTATGTTGAGTTTGGAAAC+CGG | + | tig0023526:73901-73920 | None:intergenic | 30.0% | |
| TTCATCCTCTCCCTAATAAT+GGG | - | tig0023526:65354-65373 | Msa1409560:three_prime_UTR | 35.0% | |
| GAATTTCATCTTCGGAAGAT+TGG | + | tig0023526:65626-65645 | None:intergenic | 35.0% | |
| TTGGGGATGAATTTCATCTT+CGG | + | tig0023526:65634-65653 | None:intergenic | 35.0% | |
| GAAACTCAGTCATCATTTCA+CGG | + | tig0023526:65665-65684 | None:intergenic | 35.0% | |
| ATCAAATCGTTGCCAACATT+GGG | + | tig0023526:65687-65706 | None:intergenic | 35.0% | |
| GGATGCATAGATTGAATTAG+AGG | + | tig0023526:66061-66080 | None:intergenic | 35.0% | |
| CTAATTCAATCTATGCATCC+GGG | - | tig0023526:66061-66080 | Msa1409560:CDS | 35.0% | |
| TAATTCAATCTATGCATCCG+GGG | - | tig0023526:66062-66081 | Msa1409560:CDS | 35.0% | |
| AGAATTGCCTGAAACATGTT+CGG | - | tig0023526:66108-66127 | Msa1409560:CDS | 35.0% | |
| ATTCTGTTGGTCCTAGAAAA+AGG | - | tig0023526:66182-66201 | Msa1409560:intron | 35.0% | |
| ! | GTTTTGTGCCTCTGTTAATT+TGG | + | tig0023526:66347-66366 | None:intergenic | 35.0% |
| TCGTATCATATGATGCTTCA+TGG | - | tig0023526:66437-66456 | Msa1409560:intron | 35.0% | |
| TATGTCCATCCAGTTTAATG+TGG | - | tig0023526:66799-66818 | Msa1409560:intron | 35.0% | |
| ! | TATAATAGTTTGGTTCCCTC+TGG | - | tig0023526:66900-66919 | Msa1409560:intron | 35.0% |
| ATAGTCAAACTAATCCCGTA+AGG | + | tig0023526:66935-66954 | None:intergenic | 35.0% | |
| CACAAAAAGAATTATCAGGG+GGG | - | tig0023526:67082-67101 | Msa1409560:intron | 35.0% | |
| TAATCACCTGTTCATGTATC+AGG | - | tig0023526:67198-67217 | Msa1409560:intron | 35.0% | |
| GTTAACCATAATATGTCCGA+TGG | - | tig0023526:67271-67290 | Msa1409560:intron | 35.0% | |
| TGTTACCATCGGACATATTA+TGG | + | tig0023526:67279-67298 | None:intergenic | 35.0% | |
| ACCAAAGCAATAACAGTTTC+TGG | - | tig0023526:67340-67359 | Msa1409560:intron | 35.0% | |
| GAATGTAACATTCGCATGTT+TGG | - | tig0023526:67548-67567 | Msa1409560:intron | 35.0% | |
| TTCTATTCTCGTTTGCAAGT+TGG | - | tig0023526:67631-67650 | Msa1409560:intron | 35.0% | |
| TCTATTCTCGTTTGCAAGTT+GGG | - | tig0023526:67632-67651 | Msa1409560:intron | 35.0% | |
| ! | AAGTTCTACTCTATTTCTCG+CGG | + | tig0023526:67670-67689 | None:intergenic | 35.0% |
| AGGTAAAATAAGGGGAAAGT+GGG | + | tig0023526:67719-67738 | None:intergenic | 35.0% | |
| !! | TTGACTTTGAAGTATGTGCT+TGG | - | tig0023526:68039-68058 | Msa1409560:intron | 35.0% |
| !! | ATAAATGCTTGATTGGCTTG+TGG | + | tig0023526:68261-68280 | None:intergenic | 35.0% |
| AGAGTTACAAGATCCAGAAA+AGG | - | tig0023526:68302-68321 | Msa1409560:CDS | 35.0% | |
| ! | TTATACCTTTAGGAGTTCCT+AGG | - | tig0023526:68436-68455 | Msa1409560:intron | 35.0% |
| CCTATGTGTGACTTCAATAA+TGG | + | tig0023526:68536-68555 | None:intergenic | 35.0% | |
| CCATTATTGAAGTCACACAT+AGG | - | tig0023526:68533-68552 | Msa1409560:intron | 35.0% | |
| AGTCACACATATCTACCTTT+AGG | - | tig0023526:68612-68631 | Msa1409560:intron | 35.0% | |
| AGTCCTAGATAATAGGACTT+TGG | + | tig0023526:68901-68920 | None:intergenic | 35.0% | |
| TCGATGATTTCAAGCATTCA+AGG | + | tig0023526:69021-69040 | None:intergenic | 35.0% | |
| AAATTAGGGCAACATTTAGC+TGG | - | tig0023526:69093-69112 | Msa1409560:intron | 35.0% | |
| CATGAAAGGAAGTAACGATA+TGG | + | tig0023526:69159-69178 | None:intergenic | 35.0% | |
| ACATTGCATTGCAGATTGAA+AGG | + | tig0023526:69253-69272 | None:intergenic | 35.0% | |
| AATCAAACTCAAGCAAGAAC+AGG | - | tig0023526:69340-69359 | Msa1409560:intron | 35.0% | |
| !! | TTGTCTAATGGTGCTAGTTT+TGG | - | tig0023526:69389-69408 | Msa1409560:intron | 35.0% |
| ! | TGAGCTTTTGCAATGTAGAT+GGG | - | tig0023526:69491-69510 | Msa1409560:intron | 35.0% |
| GCATCAAAAAGCTATACTGT+TGG | + | tig0023526:69560-69579 | None:intergenic | 35.0% | |
| ! | GTATAGCTTTTTGATGCTGT+TGG | - | tig0023526:69563-69582 | Msa1409560:intron | 35.0% |
| ATTAGAGTTAGGACTTAGGA+CGG | - | tig0023526:69665-69684 | Msa1409560:intron | 35.0% | |
| ! | GATGATTGGTTATTCCCAAT+TGG | - | tig0023526:69770-69789 | Msa1409560:intron | 35.0% |
| TGCATAAGCACATACCAATT+GGG | + | tig0023526:69787-69806 | None:intergenic | 35.0% | |
| TTGCATAAGCACATACCAAT+TGG | + | tig0023526:69788-69807 | None:intergenic | 35.0% | |
| TGCAAGAATTGATCAAACCA+TGG | - | tig0023526:69803-69822 | Msa1409560:intron | 35.0% | |
| TTAACCCATCCTTACTAAAC+CGG | - | tig0023526:69937-69956 | Msa1409560:intron | 35.0% | |
| ! | AGCCTTATCTTTAATCTACG+TGG | - | tig0023526:69999-70018 | Msa1409560:intron | 35.0% |
| GCCTTATCTTTAATCTACGT+GGG | - | tig0023526:70000-70019 | Msa1409560:intron | 35.0% | |
| TCCCACGTAGATTAAAGATA+AGG | + | tig0023526:70004-70023 | None:intergenic | 35.0% | |
| TGGTATCAGAGCTTATTGAT+CGG | + | tig0023526:70101-70120 | None:intergenic | 35.0% | |
| !!! | CCTTACAAGTTGGTTTTGTA+AGG | + | tig0023526:70154-70173 | None:intergenic | 35.0% |
| CCTTACAAAACCAACTTGTA+AGG | - | tig0023526:70151-70170 | Msa1409560:intron | 35.0% | |
| AAAACCAACTTGTAAGGTGA+GGG | - | tig0023526:70157-70176 | Msa1409560:intron | 35.0% | |
| TATCTGACCTTATCTATGTG+GGG | - | tig0023526:70200-70219 | Msa1409560:intron | 35.0% | |
| CTGTTAGGAGATGTGATAAT+TGG | - | tig0023526:70266-70285 | Msa1409560:intron | 35.0% | |
| ! | ATGATCTAACGTTTTACCGA+TGG | - | tig0023526:70543-70562 | Msa1409560:intron | 35.0% |
| ! | TGATCTAACGTTTTACCGAT+GGG | - | tig0023526:70544-70563 | Msa1409560:intron | 35.0% |
| ! | TGTCGTGTTTGGAATGATAT+TGG | - | tig0023526:70649-70668 | Msa1409560:intron | 35.0% |
| CACAAGACAAGACAATTACT+CGG | + | tig0023526:70700-70719 | None:intergenic | 35.0% | |
| TCTTGTCTTGTGACTATTCA+AGG | - | tig0023526:70708-70727 | Msa1409560:intron | 35.0% | |
| ! | GATTTCTAGGAATCTATGAC+AGG | - | tig0023526:70842-70861 | Msa1409560:intron | 35.0% |
| ATCTATGACAGGTATATCCA+TGG | - | tig0023526:70853-70872 | Msa1409560:intron | 35.0% | |
| ! | GTCATCCATTCATCTCTTTT+GGG | + | tig0023526:70923-70942 | None:intergenic | 35.0% |
| ! | TGTCATCCATTCATCTCTTT+TGG | + | tig0023526:70924-70943 | None:intergenic | 35.0% |
| ! | GCAAGCTTTATAAGTACAGT+AGG | - | tig0023526:70996-71015 | Msa1409560:intron | 35.0% |
| !! | TGGTGGGTCATATTGAATTT+TGG | - | tig0023526:71133-71152 | Msa1409560:intron | 35.0% |
| GCTAGATTACAACTTCTAAC+TGG | + | tig0023526:71238-71257 | None:intergenic | 35.0% | |
| ! | AATCTAGCTTGGGTTCATAT+TGG | - | tig0023526:71250-71269 | Msa1409560:intron | 35.0% |
| ! | ATCTAGCTTGGGTTCATATT+GGG | - | tig0023526:71251-71270 | Msa1409560:intron | 35.0% |
| GAGAAGAGTTTATAAAGAGG+AGG | - | tig0023526:71714-71733 | Msa1409560:intron | 35.0% | |
| CTAACTCATCCTTACAAAAC+TGG | + | tig0023526:71758-71777 | None:intergenic | 35.0% | |
| ATATCATACCACAAGTTACG+CGG | - | tig0023526:71806-71825 | Msa1409560:intron | 35.0% | |
| TATTTAAACCGCGTAACTTG+TGG | + | tig0023526:71817-71836 | None:intergenic | 35.0% | |
| GTTACGCGGTTTAAATATCT+TGG | - | tig0023526:71820-71839 | Msa1409560:intron | 35.0% | |
| !!! | TTCTCTGTCATTTTGCACTA+TGG | + | tig0023526:71848-71867 | None:intergenic | 35.0% |
| TGCAAAATGACAGAGAAACA+GGG | - | tig0023526:71851-71870 | Msa1409560:intron | 35.0% | |
| AAGCTGAATGGTTGAAATGA+AGG | - | tig0023526:71893-71912 | Msa1409560:intron | 35.0% | |
| TGAATGGTTGAAATGAAGGA+GGG | - | tig0023526:71897-71916 | Msa1409560:intron | 35.0% | |
| !! | GAAAGTATGACTCAAGTTGA+AGG | - | tig0023526:71942-71961 | Msa1409560:CDS | 35.0% |
| TAAGATAGGCGATGTTGTAT+AGG | - | tig0023526:71986-72005 | Msa1409560:intron | 35.0% | |
| CAAGAACCAACACGAAAATA+AGG | - | tig0023526:72026-72045 | Msa1409560:intron | 35.0% | |
| !!! | CAACATCCTTATTTTCGTGT+TGG | + | tig0023526:72035-72054 | None:intergenic | 35.0% |
| AACACCTATAGCAGAAAAGA+TGG | - | tig0023526:72123-72142 | Msa1409560:intron | 35.0% | |
| CTACAAGTCTTCTTTCTACA+CGG | + | tig0023526:72174-72193 | None:intergenic | 35.0% | |
| AGTAAGTAGAGTAGACTAGA+TGG | - | tig0023526:72201-72220 | Msa1409560:intron | 35.0% | |
| GATAGTAGTCAAATCACTAG+AGG | - | tig0023526:72223-72242 | Msa1409560:intron | 35.0% | |
| ! | GTCTCTCTTGTAGTTTTTCT+AGG | + | tig0023526:72259-72278 | None:intergenic | 35.0% |
| AGATCTTGAGATTAGTGAGT+TGG | - | tig0023526:72288-72307 | Msa1409560:intron | 35.0% | |
| CAAAGTAGGTCAATTAAACC+GGG | + | tig0023526:72338-72357 | None:intergenic | 35.0% | |
| CCAAAGTAGGTCAATTAAAC+CGG | + | tig0023526:72339-72358 | None:intergenic | 35.0% | |
| TCTGTGTGAAAAACCAAAGT+AGG | + | tig0023526:72352-72371 | None:intergenic | 35.0% | |
| AGAAAATGGGTCAGTTATTC+CGG | - | tig0023526:72521-72540 | Msa1409560:intron | 35.0% | |
| !!! | TGCAGTCCCTTTTTCAAAAA+AGG | - | tig0023526:72659-72678 | Msa1409560:CDS | 35.0% |
| !!! | AGTCCCTTTTTCAAAAAAGG+TGG | - | tig0023526:72662-72681 | Msa1409560:CDS | 35.0% |
| GACTATACAGCTTGAAAGAA+AGG | + | tig0023526:72971-72990 | None:intergenic | 35.0% | |
| ! | AGAAAAGAAAAGGGCTAGTA+CGG | - | tig0023526:73089-73108 | Msa1409560:CDS | 35.0% |
| AGCAAAACGATCAAAAACGT+TGG | - | tig0023526:73140-73159 | Msa1409560:CDS | 35.0% | |
| !! | CTGTTGTTTGGACTTTTTCT+TGG | + | tig0023526:73199-73218 | None:intergenic | 35.0% |
| TCCAAACAACAGACAGATAA+GGG | - | tig0023526:73207-73226 | Msa1409560:CDS | 35.0% | |
| ! | CGGATTATTCATTTTCCAGA+TGG | - | tig0023526:73461-73480 | Msa1409560:intron | 35.0% |
| ! | TAGAGTTCTGATTCTGCAAT+TGG | - | tig0023526:73614-73633 | Msa1409560:CDS | 35.0% |
| ! | GTATTTATGTTTGTTGCACG+TGG | - | tig0023526:73696-73715 | Msa1409560:CDS | 35.0% |
| TAGTGAAGATAGTATGTGTC+TGG | - | tig0023526:73734-73753 | Msa1409560:CDS | 35.0% | |
| CAAGTGGAGAATCTAATACT+TGG | + | tig0023526:73850-73869 | None:intergenic | 35.0% | |
| AAACAGTGAAAAACGTCAAG+TGG | + | tig0023526:73866-73885 | None:intergenic | 35.0% | |
| CTCAACATAAATTGTTGACG+TGG | - | tig0023526:73910-73929 | Msa1409560:five_prime_UTR | 35.0% | |
| TGGCTGCATTTGATGAAATA+TGG | - | tig0023526:73930-73949 | Msa1409560:five_prime_UTR | 35.0% | |
| AGCAAAGAAGAGAAGAGAAG+AGG | + | tig0023526:65320-65339 | None:intergenic | 40.0% | |
| ATTAGGGAGAGGATGAAGAA+GGG | + | tig0023526:65351-65370 | None:intergenic | 40.0% | |
| TATTAGGGAGAGGATGAAGA+AGG | + | tig0023526:65352-65371 | None:intergenic | 40.0% | |
| CTTCATCCTCTCCCTAATAA+TGG | - | tig0023526:65353-65372 | Msa1409560:three_prime_UTR | 40.0% | |
| GCGTTTGTCACCCATTATTA+GGG | + | tig0023526:65367-65386 | None:intergenic | 40.0% | |
| TGCGTTTGTCACCCATTATT+AGG | + | tig0023526:65368-65387 | None:intergenic | 40.0% | |
| AGAAAGAGAGAGCAAGAGAA+AGG | - | tig0023526:65536-65555 | Msa1409560:three_prime_UTR | 40.0% | |
| GAAAACGGAGATACAGAGAT+AGG | - | tig0023526:65565-65584 | Msa1409560:three_prime_UTR | 40.0% | |
| GAGATAGGAGAAAATCCAAG+AGG | - | tig0023526:65580-65599 | Msa1409560:three_prime_UTR | 40.0% | |
| ATGACTGAGTTTCCCAATGT+TGG | - | tig0023526:65672-65691 | Msa1409560:intron | 40.0% | |
| CATCAAATCGTTGCCAACAT+TGG | + | tig0023526:65688-65707 | None:intergenic | 40.0% | |
| ! | AACAACATCTAAAGTAGGGG+AGG | + | tig0023526:66035-66054 | None:intergenic | 40.0% |
| TCCCCTACTTTAGATGTTGT+TGG | - | tig0023526:66034-66053 | Msa1409560:CDS | 40.0% | |
| ! | GCCAACAACATCTAAAGTAG+GGG | + | tig0023526:66038-66057 | None:intergenic | 40.0% |
| ! | GGCCAACAACATCTAAAGTA+GGG | + | tig0023526:66039-66058 | None:intergenic | 40.0% |
| ! | GAGAATGGCAACCTTTTTCT+AGG | + | tig0023526:66196-66215 | None:intergenic | 40.0% |
| ! | TGTCTTTAGAGAAGCTGACT+TGG | - | tig0023526:66474-66493 | Msa1409560:intron | 40.0% |
| GACGCTACTGAACTATTTGT+GGG | - | tig0023526:66499-66518 | Msa1409560:intron | 40.0% | |
| ! | GGGTTTAATGATTGATGGCA+TGG | - | tig0023526:66655-66674 | Msa1409560:intron | 40.0% |
| CTTCAACTTAAGGAAGCCAA+TGG | + | tig0023526:66772-66791 | None:intergenic | 40.0% | |
| ATGATGCCACCACATTAAAC+TGG | + | tig0023526:66811-66830 | None:intergenic | 40.0% | |
| AGTTTGACTATCTGAAGACG+AGG | - | tig0023526:66944-66963 | Msa1409560:intron | 40.0% | |
| GATCTCAACTTCCATTATCC+TGG | + | tig0023526:67227-67246 | None:intergenic | 40.0% | |
| AACAGCCCATATGATGTTCT+AGG | - | tig0023526:67247-67266 | Msa1409560:intron | 40.0% | |
| GCCAGAAACTGTTATTGCTT+TGG | + | tig0023526:67344-67363 | None:intergenic | 40.0% | |
| ! | TCTTCAGTTTTTCCTGCCTA+AGG | - | tig0023526:67456-67475 | Msa1409560:intron | 40.0% |
| TATTCCTGAGAATGTGAGCT+TGG | - | tig0023526:67525-67544 | Msa1409560:intron | 40.0% | |
| ATTCCTGAGAATGTGAGCTT+GGG | - | tig0023526:67526-67545 | Msa1409560:intron | 40.0% | |
| TGTAACATTCGCATGTTTGG+TGG | - | tig0023526:67551-67570 | Msa1409560:intron | 40.0% | |
| ! | AGTTCTACTCTATTTCTCGC+GGG | + | tig0023526:67669-67688 | None:intergenic | 40.0% |
| GAGGTAAAATAAGGGGAAAG+TGG | + | tig0023526:67720-67739 | None:intergenic | 40.0% | |
| GTATGTGCTTGGAACTGAAA+AGG | - | tig0023526:68050-68069 | Msa1409560:intron | 40.0% | |
| !! | TGTGGATGAGAGCATTTATC+TGG | + | tig0023526:68243-68262 | None:intergenic | 40.0% |
| ! | CCATTGATAACAACCAACCT+AGG | + | tig0023526:68456-68475 | None:intergenic | 40.0% |
| !! | CCTAGGTTGGTTGTTATCAA+TGG | - | tig0023526:68453-68472 | Msa1409560:intron | 40.0% |
| ! | GGTTGGTTGTTATCAATGGA+AGG | - | tig0023526:68457-68476 | Msa1409560:intron | 40.0% |
| TGTAAGCGCTTATCCAAACA+GGG | + | tig0023526:68638-68657 | None:intergenic | 40.0% | |
| ! | AAGCTATCTGGAAGAGCTTT+TGG | - | tig0023526:68748-68767 | Msa1409560:intron | 40.0% |
| AGACTGCTTGAGAGATCTTA+TGG | + | tig0023526:68816-68835 | None:intergenic | 40.0% | |
| ACATCAAATGCTTCTGATCC+TGG | - | tig0023526:68965-68984 | Msa1409560:intron | 40.0% | |
| CATCAAATGCTTCTGATCCT+GGG | - | tig0023526:68966-68985 | Msa1409560:intron | 40.0% | |
| ATCAAATGCTTCTGATCCTG+GGG | - | tig0023526:68967-68986 | Msa1409560:intron | 40.0% | |
| ! | CTTTGTGTAGCGGAAAGAAA+TGG | - | tig0023526:69310-69329 | Msa1409560:intron | 40.0% |
| GCAAGAACAGGAAGACTTAA+AGG | - | tig0023526:69352-69371 | Msa1409560:intron | 40.0% | |
| TGAACTTAAAGTCATGCGAG+AGG | - | tig0023526:69443-69462 | Msa1409560:intron | 40.0% | |
| ! | GTGAGCTTTTGCAATGTAGA+TGG | - | tig0023526:69490-69509 | Msa1409560:intron | 40.0% |
| !! | GCTTTTTGATGCTGTTGGTT+CGG | - | tig0023526:69568-69587 | Msa1409560:intron | 40.0% |
| !!! | CTTTTTGATGCTGTTGGTTC+GGG | - | tig0023526:69569-69588 | Msa1409560:intron | 40.0% |
| AGTGATAGGAACTTATGCAG+AGG | - | tig0023526:69637-69656 | Msa1409560:intron | 40.0% | |
| TTAGAGTTAGGACTTAGGAC+GGG | - | tig0023526:69666-69685 | Msa1409560:intron | 40.0% | |
| TTCACGCTTTACTTGGGAAA+TGG | + | tig0023526:69843-69862 | None:intergenic | 40.0% | |
| TTTCCCAAGTAAAGCGTGAA+AGG | - | tig0023526:69843-69862 | Msa1409560:CDS | 40.0% | |
| TTCCCAAGTAAAGCGTGAAA+GGG | - | tig0023526:69844-69863 | Msa1409560:CDS | 40.0% | |
| ! | AAAGCCGGTTTAGTAAGGAT+GGG | + | tig0023526:69944-69963 | None:intergenic | 40.0% |
| ! | AAAAGCCGGTTTAGTAAGGA+TGG | + | tig0023526:69945-69964 | None:intergenic | 40.0% |
| ! | CCTTAAAAGCCGGTTTAGTA+AGG | + | tig0023526:69949-69968 | None:intergenic | 40.0% |
| !! | CCTTACTAAACCGGCTTTTA+AGG | - | tig0023526:69946-69965 | Msa1409560:intron | 40.0% |
| !!! | TAAACCGGCTTTTAAGGTGA+GGG | - | tig0023526:69952-69971 | Msa1409560:intron | 40.0% |
| GGTATCAGAGCTTATTGATC+GGG | + | tig0023526:70100-70119 | None:intergenic | 40.0% | |
| CAAAACCAACTTGTAAGGTG+AGG | - | tig0023526:70156-70175 | Msa1409560:intron | 40.0% | |
| AAACCAACTTGTAAGGTGAG+GGG | - | tig0023526:70158-70177 | Msa1409560:intron | 40.0% | |
| TATAAAGGCAACCTGCTGTT+AGG | - | tig0023526:70251-70270 | Msa1409560:intron | 40.0% | |
| TTATCACATCTCCTAACAGC+AGG | + | tig0023526:70265-70284 | None:intergenic | 40.0% | |
| ! | CATGCTCATTTTCCTCTTCT+TGG | - | tig0023526:70672-70691 | Msa1409560:intron | 40.0% |
| TATGACAGGTATATCCATGG+AGG | - | tig0023526:70856-70875 | Msa1409560:intron | 40.0% | |
| ATGACAGGTATATCCATGGA+GGG | - | tig0023526:70857-70876 | Msa1409560:intron | 40.0% | |
| TGGATCCCAAAAGAGATGAA+TGG | - | tig0023526:70915-70934 | Msa1409560:CDS | 40.0% | |
| !!! | GAATTGGTCTTGACAGGTTT+TGG | - | tig0023526:71190-71209 | Msa1409560:intron | 40.0% |
| AAGCAATGAAGGCAAACCAA+AGG | + | tig0023526:71617-71636 | None:intergenic | 40.0% | |
| TCTCAAAGCCAACACAATGA+AGG | + | tig0023526:71649-71668 | None:intergenic | 40.0% | |
| !! | TTCATTGTGTTGGCTTTGAG+AGG | - | tig0023526:71648-71667 | Msa1409560:intron | 40.0% |
| !! | TCATTGTGTTGGCTTTGAGA+GGG | - | tig0023526:71649-71668 | Msa1409560:intron | 40.0% |
| !! | CCTTACAAAACTGGCTTGTA+AGG | + | tig0023526:71749-71768 | None:intergenic | 40.0% |
| !! | CCTTACAAGCCAGTTTTGTA+AGG | - | tig0023526:71746-71765 | Msa1409560:intron | 40.0% |
| GTGCAAAATGACAGAGAAAC+AGG | - | tig0023526:71850-71869 | Msa1409560:intron | 40.0% | |
| GCAAAATGACAGAGAAACAG+GGG | - | tig0023526:71852-71871 | Msa1409560:intron | 40.0% | |
| CTGAATGGTTGAAATGAAGG+AGG | - | tig0023526:71896-71915 | Msa1409560:intron | 40.0% | |
| TGTTGTATAGGACAGAGTGT+TGG | - | tig0023526:71998-72017 | Msa1409560:intron | 40.0% | |
| ! | GTTGTATAGGACAGAGTGTT+GGG | - | tig0023526:71999-72018 | Msa1409560:intron | 40.0% |
| CGAAAATAAGGATGTTGCGT+TGG | - | tig0023526:72038-72057 | Msa1409560:intron | 40.0% | |
| ACCACATTAGAGAGAGAGTT+GGG | - | tig0023526:72098-72117 | Msa1409560:intron | 40.0% | |
| ACCTATAGCAGAAAAGATGG+TGG | - | tig0023526:72126-72145 | Msa1409560:intron | 40.0% | |
| ! | TCCACCATCTTTTCTGCTAT+AGG | + | tig0023526:72130-72149 | None:intergenic | 40.0% |
| !! | CAGAAAAGATGGTGGAAACT+AGG | - | tig0023526:72134-72153 | Msa1409560:intron | 40.0% |
| AGTCAAATCACTAGAGGTAG+AGG | - | tig0023526:72229-72248 | Msa1409560:intron | 40.0% | |
| CCGGTTTAATTGACCTACTT+TGG | - | tig0023526:72336-72355 | Msa1409560:intron | 40.0% | |
| GAAAATGGGTCAGTTATTCC+GGG | - | tig0023526:72522-72541 | Msa1409560:intron | 40.0% | |
| TCCAGACCTCTATTCTTCTA+GGG | - | tig0023526:72611-72630 | Msa1409560:intron | 40.0% | |
| AACAAGCCCTAGAAGAATAG+AGG | + | tig0023526:72620-72639 | None:intergenic | 40.0% | |
| !!! | TAGGGCTTGTTTTTGCATTG+AGG | - | tig0023526:72629-72648 | Msa1409560:CDS | 40.0% |
| TGTATTTATGCACTTCAGCC+TGG | - | tig0023526:72788-72807 | Msa1409560:intron | 40.0% | |
| GTAGAGGAGACACTAGTATT+TGG | - | tig0023526:72858-72877 | Msa1409560:CDS | 40.0% | |
| GGTGCAAAAACATCAAGAAG+AGG | - | tig0023526:73161-73180 | Msa1409560:CDS | 40.0% | |
| GTCCAAACAACAGACAGATA+AGG | - | tig0023526:73206-73225 | Msa1409560:CDS | 40.0% | |
| TCCCTTATCTGTCTGTTGTT+TGG | + | tig0023526:73211-73230 | None:intergenic | 40.0% | |
| AACAGACAGATAAGGGAGAA+TGG | - | tig0023526:73214-73233 | Msa1409560:CDS | 40.0% | |
| ACAGACAGATAAGGGAGAAT+GGG | - | tig0023526:73215-73234 | Msa1409560:CDS | 40.0% | |
| TGTCTGAGGGATTATCTTCA+AGG | - | tig0023526:73322-73341 | Msa1409560:intron | 40.0% | |
| CTGACTCTTGATCGAATCAA+AGG | + | tig0023526:73377-73396 | None:intergenic | 40.0% | |
| CATCTGTCAATCACTTTGTC+TGG | - | tig0023526:73406-73425 | Msa1409560:intron | 40.0% | |
| CCAACAAGCTTCTTAGAGAT+CGG | - | tig0023526:73441-73460 | Msa1409560:intron | 40.0% | |
| AATGAGAGAAACTGACCATC+TGG | + | tig0023526:73479-73498 | None:intergenic | 40.0% | |
| ! | GTGGTTTTTACTGTCATCGT+TGG | - | tig0023526:73786-73805 | Msa1409560:CDS | 40.0% |
| CACTTATACCACACTGCATA+TGG | - | tig0023526:73822-73841 | Msa1409560:exon | 40.0% | |
| TTAGGGAGAGGATGAAGAAG+GGG | + | tig0023526:65350-65369 | None:intergenic | 45.0% | |
| TGTCACCCATTATTAGGGAG+AGG | + | tig0023526:65362-65381 | None:intergenic | 45.0% | |
| TCAGAATCGGAATCAGTGCA+GGG | + | tig0023526:65438-65457 | None:intergenic | 45.0% | |
| CTTGCTCTCTCTTTCTCGTT+TGG | + | tig0023526:65532-65551 | None:intergenic | 45.0% | |
| ATCGGAATAGTGATGCCTCT+TGG | + | tig0023526:65598-65617 | None:intergenic | 45.0% | |
| TTCGGAAGATTGGGAGTCAT+CGG | + | tig0023526:65616-65635 | None:intergenic | 45.0% | |
| ATTTCACGGAGTGCAGTTTG+GGG | + | tig0023526:65651-65670 | None:intergenic | 45.0% | |
| CATTTCACGGAGTGCAGTTT+GGG | + | tig0023526:65652-65671 | None:intergenic | 45.0% | |
| TCATTTCACGGAGTGCAGTT+TGG | + | tig0023526:65653-65672 | None:intergenic | 45.0% | |
| TGTTGGCAACGATTTGATGC+AGG | - | tig0023526:65689-65708 | Msa1409560:intron | 45.0% | |
| !! | GATTGATAATGGGCAAGCTG+TGG | - | tig0023526:65901-65920 | Msa1409560:CDS | 45.0% |
| !! | AAAGTAGGGGAGGCTTTAGA+AGG | + | tig0023526:66025-66044 | None:intergenic | 45.0% |
| ! | GGGCCAACAACATCTAAAGT+AGG | + | tig0023526:66040-66059 | None:intergenic | 45.0% |
| GTTTCAGGCAATTCTGCAGA+AGG | + | tig0023526:66103-66122 | None:intergenic | 45.0% | |
| TGCTGCTGCCAAATTAACAG+AGG | - | tig0023526:66336-66355 | Msa1409560:CDS | 45.0% | |
| ! | CAGAGGCACAAAACGAATTC+AGG | - | tig0023526:66353-66372 | Msa1409560:CDS | 45.0% |
| CGACGCTACTGAACTATTTG+TGG | - | tig0023526:66498-66517 | Msa1409560:intron | 45.0% | |
| TCTGCTTCAGAAACCATAGC+AGG | + | tig0023526:66535-66554 | None:intergenic | 45.0% | |
| !!! | CGAAGCAGAACGTTTTGAAG+AGG | - | tig0023526:66564-66583 | Msa1409560:intron | 45.0% |
| AGTCTCCTTGATGTAGCCAT+TGG | - | tig0023526:66753-66772 | Msa1409560:intron | 45.0% | |
| GTCCATCCAGTTTAATGTGG+TGG | - | tig0023526:66802-66821 | Msa1409560:intron | 45.0% | |
| TGCCACCACATTAAACTGGA+TGG | + | tig0023526:66807-66826 | None:intergenic | 45.0% | |
| GTAAGGAATCCATCACCAGA+GGG | + | tig0023526:66918-66937 | None:intergenic | 45.0% | |
| !! | CTCTGGTGATGGATTCCTTA+CGG | - | tig0023526:66917-66936 | Msa1409560:intron | 45.0% |
| !! | TCTGGTGATGGATTCCTTAC+GGG | - | tig0023526:66918-66937 | Msa1409560:intron | 45.0% |
| TGGTGACCTGATACATGAAC+AGG | + | tig0023526:67207-67226 | None:intergenic | 45.0% | |
| TGTTCATGTATCAGGTCACC+AGG | - | tig0023526:67206-67225 | Msa1409560:intron | 45.0% | |
| GTATCAGGTCACCAGGATAA+TGG | - | tig0023526:67213-67232 | Msa1409560:intron | 45.0% | |
| !! | GGGTGTTGAGACAGTTGAAT+CGG | + | tig0023526:67397-67416 | None:intergenic | 45.0% |
| AACTTATTTGGGCCTTAGGC+AGG | + | tig0023526:67471-67490 | None:intergenic | 45.0% | |
| ATTCCCAAGCTCACATTCTC+AGG | + | tig0023526:67532-67551 | None:intergenic | 45.0% | |
| !! | ACTTAGGGGCGTTTGTTTCA+AGG | + | tig0023526:67870-67889 | None:intergenic | 45.0% |
| ! | ACCTTTAGGAGTTCCTAGGT+TGG | - | tig0023526:68440-68459 | Msa1409560:intron | 45.0% |
| ACCAACCTAGGAACTCCTAA+AGG | + | tig0023526:68444-68463 | None:intergenic | 45.0% | |
| ATCTACCTTTAGGCCCTGTT+TGG | - | tig0023526:68622-68641 | Msa1409560:intron | 45.0% | |
| CTTATCCAAACAGGGCCTAA+AGG | + | tig0023526:68630-68649 | None:intergenic | 45.0% | |
| CTGTAAGCGCTTATCCAAAC+AGG | + | tig0023526:68639-68658 | None:intergenic | 45.0% | |
| GAGCTGATGAGATATGACTG+TGG | - | tig0023526:68989-69008 | Msa1409560:intron | 45.0% | |
| GATGAGATATGACTGTGGCA+AGG | - | tig0023526:68994-69013 | Msa1409560:intron | 45.0% | |
| TCGGTGGCATCAAACATGAA+AGG | + | tig0023526:69173-69192 | None:intergenic | 45.0% | |
| ! | TTTGATGCCACCGAAAGCAT+GGG | - | tig0023526:69179-69198 | Msa1409560:intron | 45.0% |
| ! | ACCGAAAGCATGGGGAATAA+GGG | - | tig0023526:69188-69207 | Msa1409560:intron | 45.0% |
| GGATTGTGTGCTTTGTGTAG+CGG | - | tig0023526:69300-69319 | Msa1409560:intron | 45.0% | |
| !! | CAGTCATGTGCGAAGGTATT+AGG | + | tig0023526:69418-69437 | None:intergenic | 45.0% |
| ACGCTTTACTTGGGAAATGG+AGG | + | tig0023526:69840-69859 | None:intergenic | 45.0% | |
| TCCCAAGTAAAGCGTGAAAG+GGG | - | tig0023526:69845-69864 | Msa1409560:CDS | 45.0% | |
| GTGAAAGGGGGTAAATGAAG+AGG | - | tig0023526:69858-69877 | Msa1409560:CDS | 45.0% | |
| !!! | CTAAACCGGCTTTTAAGGTG+AGG | - | tig0023526:69951-69970 | Msa1409560:intron | 45.0% |
| !!! | AAACCGGCTTTTAAGGTGAG+GGG | - | tig0023526:69953-69972 | Msa1409560:intron | 45.0% |
| ! | TTTTTCCAATACACCGCCTC+AGG | - | tig0023526:70029-70048 | Msa1409560:intron | 45.0% |
| CTTGGCTGTGTGGATGTAAA+TGG | - | tig0023526:70067-70086 | Msa1409560:intron | 45.0% | |
| GCTGTGTGGATGTAAATGGT+GGG | - | tig0023526:70071-70090 | Msa1409560:intron | 45.0% | |
| AACCAACTTGTAAGGTGAGG+GGG | - | tig0023526:70159-70178 | Msa1409560:intron | 45.0% | |
| AACCAAGCCCCACATAGATA+AGG | + | tig0023526:70210-70229 | None:intergenic | 45.0% | |
| GGTTGTAACGAGTGAATCAG+TGG | - | tig0023526:70410-70429 | Msa1409560:intron | 45.0% | |
| ! | AACGTTTTACCGATGGGAGA+CGG | - | tig0023526:70550-70569 | Msa1409560:intron | 45.0% |
| !! | AGTAAAGTACCGTCTCCCAT+CGG | + | tig0023526:70562-70581 | None:intergenic | 45.0% |
| AATTACTCGGCACCAAGAAG+AGG | + | tig0023526:70687-70706 | None:intergenic | 45.0% | |
| AAAAAGGAGCGGCGTGTTAT+TGG | - | tig0023526:70791-70810 | Msa1409560:intron | 45.0% | |
| ! | AAAAGGAGCGGCGTGTTATT+GGG | - | tig0023526:70792-70811 | Msa1409560:intron | 45.0% |
| ACAGCACTTACTTTCCTCTC+CGG | + | tig0023526:70956-70975 | None:intergenic | 45.0% | |
| CAAACCAAAGGCCGCAATTT+AGG | + | tig0023526:71605-71624 | None:intergenic | 45.0% | |
| !! | CAACACAATGAAGGTGTTGG+AGG | + | tig0023526:71640-71659 | None:intergenic | 45.0% |
| CTCCAACACCTTCATTGTGT+TGG | - | tig0023526:71638-71657 | Msa1409560:intron | 45.0% | |
| ! | AGCCAACACAATGAAGGTGT+TGG | + | tig0023526:71643-71662 | None:intergenic | 45.0% |
| ! | GGGTGGATTTATTCCCACAT+CGG | - | tig0023526:71669-71688 | Msa1409560:intron | 45.0% |
| !! | CAAAACTGGCTTGTAAGGTG+AGG | + | tig0023526:71744-71763 | None:intergenic | 45.0% |
| GACCACATTAGAGAGAGAGT+TGG | - | tig0023526:72097-72116 | Msa1409560:intron | 45.0% | |
| CCACATTAGAGAGAGAGTTG+GGG | - | tig0023526:72099-72118 | Msa1409560:intron | 45.0% | |
| !! | AGATGGTGGAAACTAGGCTT+AGG | - | tig0023526:72140-72159 | Msa1409560:intron | 45.0% |
| GAAACTAGGCTTAGGTGGTT+TGG | - | tig0023526:72148-72167 | Msa1409560:intron | 45.0% | |
| GTAGGTCAATTAAACCGGGA+CGG | + | tig0023526:72334-72353 | None:intergenic | 45.0% | |
| CTAGAAGAATAGAGGTCTGG+AGG | + | tig0023526:72612-72631 | None:intergenic | 45.0% | |
| CTCCAGACCTCTATTCTTCT+AGG | - | tig0023526:72610-72629 | Msa1409560:intron | 45.0% | |
| ATTTATGCACTTCAGCCTGG+TGG | - | tig0023526:72791-72810 | Msa1409560:intron | 45.0% | |
| TGCAATCGACCCAATTTAGC+CGG | - | tig0023526:72822-72841 | Msa1409560:intron | 45.0% | |
| ! | TTCATTTGAGGCTAGTGCAG+TGG | + | tig0023526:73067-73086 | None:intergenic | 45.0% |
| TAGTACGGATGCAGATTTGG+TGG | - | tig0023526:73104-73123 | Msa1409560:CDS | 45.0% | |
| ACAGATAAGGGAGAATGGGT+GGG | - | tig0023526:73219-73238 | Msa1409560:CDS | 45.0% | |
| TCAACATCCATGGAAGCCAT+GGG | - | tig0023526:73242-73261 | Msa1409560:CDS | 45.0% | |
| ! | CCGATCTCTAAGAAGCTTGT+TGG | + | tig0023526:73444-73463 | None:intergenic | 45.0% |
| ACTTGGATCCATATGCAGTG+TGG | + | tig0023526:73833-73852 | None:intergenic | 45.0% | |
| !!! | ATTTTTAAAATTAAAAAAGT+GGG | + | tig0023526:65728-65747 | None:intergenic | 5.0% |
| !!! | AATTTTTAAAATTAAAAAAG+TGG | + | tig0023526:65729-65748 | None:intergenic | 5.0% |
| !!! | AATATATTTTTTTTAAAATG+AGG | + | tig0023526:67739-67758 | None:intergenic | 5.0% |
| !!! | TTTTTTTTTCATAAAAAAAA+TGG | + | tig0023526:70333-70352 | None:intergenic | 5.0% |
| !! | AATGAAAAATATATATTATA+TGG | + | tig0023526:71432-71451 | None:intergenic | 5.0% |
| !! | AAATAAATAAATTATATTAC+AGG | + | tig0023526:71511-71530 | None:intergenic | 5.0% |
| !!! | ATTATTTTTATTTTATATTC+TGG | - | tig0023526:73509-73528 | Msa1409560:CDS | 5.0% |
| TGCAGGGAGAGGAAGAAGAA+GGG | + | tig0023526:65422-65441 | None:intergenic | 50.0% | |
| GTCAGAATCGGAATCAGTGC+AGG | + | tig0023526:65439-65458 | None:intergenic | 50.0% | |
| AGAGTGGTCGGAGTCAGAAT+CGG | + | tig0023526:65451-65470 | None:intergenic | 50.0% | |
| !!! | AGCTTCCGTCGCTTTTTCTG+CGG | + | tig0023526:65509-65528 | None:intergenic | 50.0% |
| TGGGCAAGCTGTGGACATAA+AGG | - | tig0023526:65910-65929 | Msa1409560:CDS | 50.0% | |
| GCTGGAACCGAACATGTTTC+AGG | + | tig0023526:66118-66137 | None:intergenic | 50.0% | |
| CCAACAGAATGATCCTCAGG+AGG | + | tig0023526:66172-66191 | None:intergenic | 50.0% | |
| CCTCCTGAGGATCATTCTGT+TGG | - | tig0023526:66169-66188 | Msa1409560:intron | 50.0% | |
| GGACCAACAGAATGATCCTC+AGG | + | tig0023526:66175-66194 | None:intergenic | 50.0% | |
| TCAGAAACCATAGCAGGAGG+TGG | + | tig0023526:66529-66548 | None:intergenic | 50.0% | |
| GCTTCAGAAACCATAGCAGG+AGG | + | tig0023526:66532-66551 | None:intergenic | 50.0% | |
| GGAAGCCAATGGCTACATCA+AGG | + | tig0023526:66761-66780 | None:intergenic | 50.0% | |
| ! | AGTTTGGTTCCCTCTGGTGA+TGG | - | tig0023526:66906-66925 | Msa1409560:intron | 50.0% |
| CGTAAGGAATCCATCACCAG+AGG | + | tig0023526:66919-66938 | None:intergenic | 50.0% | |
| TTGTGAGAGAGAGGGAGAGA+GGG | + | tig0023526:67067-67086 | None:intergenic | 50.0% | |
| TTTGTGAGAGAGAGGGAGAG+AGG | + | tig0023526:67068-67087 | None:intergenic | 50.0% | |
| ! | CCTGCAAGGCTTACCTTTTC+TGG | + | tig0023526:68318-68337 | None:intergenic | 50.0% |
| CCAGAAAAGGTAAGCCTTGC+AGG | - | tig0023526:68315-68334 | Msa1409560:CDS | 50.0% | |
| TCATATCTCATCAGCTCCCC+AGG | + | tig0023526:68986-69005 | None:intergenic | 50.0% | |
| GTTTGATGCCACCGAAAGCA+TGG | - | tig0023526:69178-69197 | Msa1409560:intron | 50.0% | |
| ! | TTGATGCCACCGAAAGCATG+GGG | - | tig0023526:69180-69199 | Msa1409560:intron | 50.0% |
| CTTATTCCCCATGCTTTCGG+TGG | + | tig0023526:69189-69208 | None:intergenic | 50.0% | |
| ! | CACCGAAAGCATGGGGAATA+AGG | - | tig0023526:69187-69206 | Msa1409560:intron | 50.0% |
| GCCCTTATTCCCCATGCTTT+CGG | + | tig0023526:69192-69211 | None:intergenic | 50.0% | |
| ATACCTTCGCACATGACTGC+AGG | - | tig0023526:69419-69438 | Msa1409560:intron | 50.0% | |
| GCACTGTGGAGAAGATCTCA+AGG | - | tig0023526:69468-69487 | Msa1409560:intron | 50.0% | |
| TGGAGGCTAAAGTCTCTCCA+TGG | + | tig0023526:69823-69842 | None:intergenic | 50.0% | |
| CCCCCTTTCACGCTTTACTT+GGG | + | tig0023526:69849-69868 | None:intergenic | 50.0% | |
| CCCAAGTAAAGCGTGAAAGG+GGG | - | tig0023526:69846-69865 | Msa1409560:CDS | 50.0% | |
| ACCCCCTTTCACGCTTTACT+TGG | + | tig0023526:69850-69869 | None:intergenic | 50.0% | |
| ACAGCCAAGCCCAATAGTGT+GGG | + | tig0023526:70056-70075 | None:intergenic | 50.0% | |
| GGCTGTGTGGATGTAAATGG+TGG | - | tig0023526:70070-70089 | Msa1409560:intron | 50.0% | |
| ACCAACTTGTAAGGTGAGGG+GGG | - | tig0023526:70160-70179 | Msa1409560:intron | 50.0% | |
| GACCTTATCTATGTGGGGCT+TGG | - | tig0023526:70205-70224 | Msa1409560:intron | 50.0% | |
| AAGCTCATCATCACCCTCCA+TGG | + | tig0023526:70873-70892 | None:intergenic | 50.0% | |
| GGCACAGACAGAGGTTAAAG+TGG | - | tig0023526:70895-70914 | Msa1409560:CDS | 50.0% | |
| ATGGATGACAACACTGCCTC+CGG | - | tig0023526:70934-70953 | Msa1409560:CDS | 50.0% | |
| ! | GGTGTTGGAGGAAGCAATGA+AGG | + | tig0023526:71628-71647 | None:intergenic | 50.0% |
| !! | TTGTGTTGGCTTTGAGAGGG+TGG | - | tig0023526:71652-71671 | Msa1409560:intron | 50.0% |
| AGGATGTTGCGTTGGATGTG+CGG | - | tig0023526:72046-72065 | Msa1409560:intron | 50.0% | |
| GGATGTGCGGTAAGACTAGA+CGG | - | tig0023526:72059-72078 | Msa1409560:intron | 50.0% | |
| GATGTGCGGTAAGACTAGAC+GGG | - | tig0023526:72060-72079 | Msa1409560:intron | 50.0% | |
| CCCCAACTCTCTCTCTAATG+TGG | + | tig0023526:72102-72121 | None:intergenic | 50.0% | |
| TGGTGGAAACTAGGCTTAGG+TGG | - | tig0023526:72143-72162 | Msa1409560:intron | 50.0% | |
| ATATGGTACTACCTCCGTCC+CGG | - | tig0023526:72317-72336 | Msa1409560:intron | 50.0% | |
| ATGGGTCAGTTATTCCGGGA+CGG | - | tig0023526:72526-72545 | Msa1409560:intron | 50.0% | |
| ATCATATACTCCCTCCGTCC+CGG | + | tig0023526:72543-72562 | None:intergenic | 50.0% | |
| GCCCTAGAAGAATAGAGGTC+TGG | + | tig0023526:72615-72634 | None:intergenic | 50.0% | |
| GATTGCATACTCACACCACC+AGG | + | tig0023526:72809-72828 | None:intergenic | 50.0% | |
| GCAATCGACCCAATTTAGCC+GGG | - | tig0023526:72823-72842 | Msa1409560:intron | 50.0% | |
| CAATCGACCCAATTTAGCCG+GGG | - | tig0023526:72824-72843 | Msa1409560:intron | 50.0% | |
| CTTTGTGCCCCGGCTAAATT+GGG | + | tig0023526:72834-72853 | None:intergenic | 50.0% | |
| TTTCTGAGCTCTGTCAGTCG+GGG | + | tig0023526:72891-72910 | None:intergenic | 50.0% | |
| CTTTCTGAGCTCTGTCAGTC+GGG | + | tig0023526:72892-72911 | None:intergenic | 50.0% | |
| GCTTTCTGAGCTCTGTCAGT+CGG | + | tig0023526:72893-72912 | None:intergenic | 50.0% | |
| GGCTAGTACGGATGCAGATT+TGG | - | tig0023526:73101-73120 | Msa1409560:CDS | 50.0% | |
| GACAGATAAGGGAGAATGGG+TGG | - | tig0023526:73218-73237 | Msa1409560:CDS | 50.0% | |
| AATGGGTGGGTCAACATCCA+TGG | - | tig0023526:73232-73251 | Msa1409560:CDS | 50.0% | |
| GTCAACATCCATGGAAGCCA+TGG | - | tig0023526:73241-73260 | Msa1409560:CDS | 50.0% | |
| ! | AGATCCTTTTCACGGTCCCA+TGG | + | tig0023526:73261-73280 | None:intergenic | 50.0% |
| ATGGGACCGTGAAAAGGATC+TGG | - | tig0023526:73260-73279 | Msa1409560:CDS | 50.0% | |
| TGGGACCGTGAAAAGGATCT+GGG | - | tig0023526:73261-73280 | Msa1409560:CDS | 50.0% | |
| ! | CAGCTCCCAGATCCTTTTCA+CGG | + | tig0023526:73269-73288 | None:intergenic | 50.0% |
| GTGAAAAGGATCTGGGAGCT+GGG | - | tig0023526:73268-73287 | Msa1409560:CDS | 50.0% | |
| ! | TGATGCAGAAGGCATGTCTG+AGG | - | tig0023526:73308-73327 | Msa1409560:intron | 50.0% |
| ! | GATGCAGAAGGCATGTCTGA+GGG | - | tig0023526:73309-73328 | Msa1409560:intron | 50.0% |
| GGAGAGGATGAAGAAGGGGA+TGG | + | tig0023526:65346-65365 | None:intergenic | 55.0% | |
| AGGTTGAATCGCGCGAACGA+CGG | + | tig0023526:65398-65417 | None:intergenic | 55.0% | |
| GCAGGGAGAGGAAGAAGAAG+GGG | + | tig0023526:65421-65440 | None:intergenic | 55.0% | |
| GTGCAGGGAGAGGAAGAAGA+AGG | + | tig0023526:65423-65442 | None:intergenic | 55.0% | |
| ATCGGAATCAGTGCAGGGAG+AGG | + | tig0023526:65433-65452 | None:intergenic | 55.0% | |
| ! | CCTTTTCACGGCGATGACGT+CGG | + | tig0023526:65482-65501 | None:intergenic | 55.0% |
| ! | TTCTGCGGCGGTCCTTTTCA+CGG | + | tig0023526:65494-65513 | None:intergenic | 55.0% |
| !!! | TTCCGTCGCTTTTTCTGCGG+CGG | + | tig0023526:65506-65525 | None:intergenic | 55.0% |
| GGATCAGCTCGATCATTCCC+CGG | + | tig0023526:66082-66101 | None:intergenic | 55.0% | |
| TTCGGTTCCAGCTGAGCAGA+TGG | - | tig0023526:66126-66145 | Msa1409560:CDS | 55.0% | |
| TCGTCTACCATCTGCTCAGC+TGG | + | tig0023526:66136-66155 | None:intergenic | 55.0% | |
| CCTCAGGAGGTTCTGTCGAA+TGG | + | tig0023526:66159-66178 | None:intergenic | 55.0% | |
| CCATTCGACAGAACCTCCTG+AGG | - | tig0023526:66156-66175 | Msa1409560:intron | 55.0% | |
| ACTCAGCAGACGGCATTGCA+GGG | + | tig0023526:66309-66328 | None:intergenic | 55.0% | |
| AACTCAGCAGACGGCATTGC+AGG | + | tig0023526:66310-66329 | None:intergenic | 55.0% | |
| GCAGCGAGTAACTCAGCAGA+CGG | + | tig0023526:66319-66338 | None:intergenic | 55.0% | |
| GAAACCATAGCAGGAGGTGG+AGG | + | tig0023526:66526-66545 | None:intergenic | 55.0% | |
| !! | GATGCTGTTGGTTCGGGCAA+AGG | - | tig0023526:69575-69594 | Msa1409560:intron | 55.0% |
| TGGCCCCTCACCTTAAAAGC+CGG | + | tig0023526:69959-69978 | None:intergenic | 55.0% | |
| CAGCCAAGCCCAATAGTGTG+GGG | + | tig0023526:70055-70074 | None:intergenic | 55.0% | |
| CACAGCCAAGCCCAATAGTG+TGG | + | tig0023526:70057-70076 | None:intergenic | 55.0% | |
| CACTATTGGGCTTGGCTGTG+TGG | - | tig0023526:70057-70076 | Msa1409560:intron | 55.0% | |
| ! | GGAGGGTGATGATGAGCTTC+TGG | - | tig0023526:70874-70893 | Msa1409560:intron | 55.0% |
| TGAGCTTCTGGCACAGACAG+AGG | - | tig0023526:70886-70905 | Msa1409560:CDS | 55.0% | |
| GCACTTACTTTCCTCTCCGG+AGG | + | tig0023526:70953-70972 | None:intergenic | 55.0% | |
| CTAGGGGCGGACAGCAATAA+AGG | + | tig0023526:71579-71598 | None:intergenic | 55.0% | |
| GCAATTTAGGCGACTAGGGG+CGG | + | tig0023526:71592-71611 | None:intergenic | 55.0% | |
| GCCCCTAGTCGCCTAAATTG+CGG | - | tig0023526:71591-71610 | Msa1409560:intron | 55.0% | |
| GCCGCAATTTAGGCGACTAG+GGG | + | tig0023526:71595-71614 | None:intergenic | 55.0% | |
| GGCCGCAATTTAGGCGACTA+GGG | + | tig0023526:71596-71615 | None:intergenic | 55.0% | |
| AGGCCGCAATTTAGGCGACT+AGG | + | tig0023526:71597-71616 | None:intergenic | 55.0% | |
| GTCGCCTAAATTGCGGCCTT+TGG | - | tig0023526:71598-71617 | Msa1409560:intron | 55.0% | |
| GCGGTAAGACTAGACGGGAT+AGG | - | tig0023526:72065-72084 | Msa1409560:intron | 55.0% | |
| GGTCAATTAAACCGGGACGG+AGG | + | tig0023526:72331-72350 | None:intergenic | 55.0% | |
| GTCAGTTATTCCGGGACGGA+GGG | - | tig0023526:72530-72549 | Msa1409560:intron | 55.0% | |
| CCTTTGTGCCCCGGCTAAAT+TGG | + | tig0023526:72835-72854 | None:intergenic | 55.0% | |
| CCAATTTAGCCGGGGCACAA+AGG | - | tig0023526:72832-72851 | Msa1409560:CDS | 55.0% | |
| TTTAGCCGGGGCACAAAGGA+AGG | - | tig0023526:72836-72855 | Msa1409560:CDS | 55.0% | |
| CTCTACCTTCCTTTGTGCCC+CGG | + | tig0023526:72844-72863 | None:intergenic | 55.0% | |
| GAAGCCATGGGACCGTGAAA+AGG | - | tig0023526:73254-73273 | Msa1409560:CDS | 55.0% | |
| CGTGAAAAGGATCTGGGAGC+TGG | - | tig0023526:73267-73286 | Msa1409560:CDS | 55.0% | |
| AAAAGGATCTGGGAGCTGGG+AGG | - | tig0023526:73271-73290 | Msa1409560:CDS | 55.0% | |
| GGGAGAGGAAGAAGAAGGGG+AGG | + | tig0023526:65418-65437 | None:intergenic | 60.0% | |
| TTTCACGGCGATGACGTCGG+CGG | + | tig0023526:65479-65498 | None:intergenic | 60.0% | |
| CCGACGTCATCGCCGTGAAA+AGG | - | tig0023526:65479-65498 | Msa1409560:three_prime_UTR | 60.0% | |
| GACCGCCGCAGAAAAAGCGA+CGG | - | tig0023526:65501-65520 | Msa1409560:three_prime_UTR | 60.0% | |
| CAGCCTGCAGTCATGTGCGA+AGG | + | tig0023526:69425-69444 | None:intergenic | 60.0% | |
| TCATGCGAGAGGCTGCACTG+TGG | - | tig0023526:69454-69473 | Msa1409560:intron | 60.0% | |
| CAATAGTGTGGGGCCTGAGG+CGG | + | tig0023526:70045-70064 | None:intergenic | 60.0% | |
| GCCTCAGGCCCCACACTATT+GGG | - | tig0023526:70044-70063 | Msa1409560:intron | 60.0% | |
| AGGCCCCACACTATTGGGCT+TGG | - | tig0023526:70049-70068 | Msa1409560:intron | 60.0% | |
| GCCCCCCTCACCTTACAAGT+TGG | + | tig0023526:70164-70183 | None:intergenic | 60.0% | |
| TGACAACACTGCCTCCGGAG+AGG | - | tig0023526:70939-70958 | Msa1409560:CDS | 60.0% | |
| GGGGCGGACAGCAATAAAGG+TGG | + | tig0023526:71576-71595 | None:intergenic | 60.0% | |
| GGTCAGTTATTCCGGGACGG+AGG | - | tig0023526:72529-72548 | Msa1409560:intron | 60.0% | |
| CGGGGCACAAAGGAAGGTAG+AGG | - | tig0023526:72842-72861 | Msa1409560:CDS | 60.0% | |
| TCACGGTCCCATGGCTTCCA+TGG | + | tig0023526:73252-73271 | None:intergenic | 60.0% | |
| GGGACCTCCACCTCCTGCTA+TGG | - | tig0023526:66519-66538 | Msa1409560:intron | 65.0% | |
| TGGGGCCTGAGGCGGTGTAT+TGG | + | tig0023526:70037-70056 | None:intergenic | 65.0% | |
| CGCCTCAGGCCCCACACTAT+TGG | - | tig0023526:70043-70062 | Msa1409560:intron | 65.0% | |
| GCCCAATAGTGTGGGGCCTG+AGG | + | tig0023526:70048-70067 | None:intergenic | 65.0% | |
| TCGGCGGCGGGAAGAGTGGT+CGG | + | tig0023526:65463-65482 | None:intergenic | 70.0% | |
| GACGTCGGCGGCGGGAAGAG+TGG | + | tig0023526:65467-65486 | None:intergenic | 75.0% | |
| ACGGCGATGACGTCGGCGGC+GGG | + | tig0023526:65475-65494 | None:intergenic | 75.0% | |
| CACGGCGATGACGTCGGCGG+CGG | + | tig0023526:65476-65495 | None:intergenic | 75.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| tig0023526 | gene | 65242 | 73964 | 65242 | ID=Msa1409560;Name=Msa1409560 |
| tig0023526 | mRNA | 65242 | 73964 | 65242 | ID=Msa1409560-mRNA-1;Parent=Msa1409560;Name=Msa1409560-mRNA-1;_AED=0.13;_eAED=0.13;_QI=110|0.91|0.84|1|0.83|0.69|13|490|578 |
| tig0023526 | exon | 65242 | 65629 | 65242 | ID=Msa1409560-mRNA-1:exon:26100;Parent=Msa1409560-mRNA-1 |
| tig0023526 | exon | 65724 | 66165 | 65724 | ID=Msa1409560-mRNA-1:exon:26099;Parent=Msa1409560-mRNA-1 |
| tig0023526 | exon | 66285 | 66400 | 66285 | ID=Msa1409560-mRNA-1:exon:26098;Parent=Msa1409560-mRNA-1 |
| tig0023526 | exon | 68242 | 68355 | 68242 | ID=Msa1409560-mRNA-1:exon:26097;Parent=Msa1409560-mRNA-1 |
| tig0023526 | exon | 69688 | 69765 | 69688 | ID=Msa1409560-mRNA-1:exon:26096;Parent=Msa1409560-mRNA-1 |
| tig0023526 | exon | 69833 | 69886 | 69833 | ID=Msa1409560-mRNA-1:exon:26095;Parent=Msa1409560-mRNA-1 |
| tig0023526 | exon | 70883 | 70994 | 70883 | ID=Msa1409560-mRNA-1:exon:26094;Parent=Msa1409560-mRNA-1 |
| tig0023526 | exon | 71898 | 71986 | 71898 | ID=Msa1409560-mRNA-1:exon:26093;Parent=Msa1409560-mRNA-1 |
| tig0023526 | exon | 72621 | 72723 | 72621 | ID=Msa1409560-mRNA-1:exon:26092;Parent=Msa1409560-mRNA-1 |
| tig0023526 | exon | 72832 | 72909 | 72832 | ID=Msa1409560-mRNA-1:exon:26091;Parent=Msa1409560-mRNA-1 |
| tig0023526 | exon | 73003 | 73316 | 73003 | ID=Msa1409560-mRNA-1:exon:26090;Parent=Msa1409560-mRNA-1 |
| tig0023526 | exon | 73496 | 73853 | 73496 | ID=Msa1409560-mRNA-1:exon:26089;Parent=Msa1409560-mRNA-1 |
| tig0023526 | exon | 73874 | 73964 | 73874 | ID=Msa1409560-mRNA-1:exon:26088;Parent=Msa1409560-mRNA-1 |
| tig0023526 | five_prime_UTR | 73874 | 73964 | 73874 | ID=Msa1409560-mRNA-1:five_prime_utr;Parent=Msa1409560-mRNA-1 |
| tig0023526 | five_prime_UTR | 73835 | 73853 | 73835 | ID=Msa1409560-mRNA-1:five_prime_utr;Parent=Msa1409560-mRNA-1 |
| tig0023526 | CDS | 73496 | 73834 | 73496 | ID=Msa1409560-mRNA-1:cds;Parent=Msa1409560-mRNA-1 |
| tig0023526 | CDS | 73003 | 73316 | 73003 | ID=Msa1409560-mRNA-1:cds;Parent=Msa1409560-mRNA-1 |
| tig0023526 | CDS | 72832 | 72909 | 72832 | ID=Msa1409560-mRNA-1:cds;Parent=Msa1409560-mRNA-1 |
| tig0023526 | CDS | 72621 | 72723 | 72621 | ID=Msa1409560-mRNA-1:cds;Parent=Msa1409560-mRNA-1 |
| tig0023526 | CDS | 71898 | 71986 | 71898 | ID=Msa1409560-mRNA-1:cds;Parent=Msa1409560-mRNA-1 |
| tig0023526 | CDS | 70883 | 70994 | 70883 | ID=Msa1409560-mRNA-1:cds;Parent=Msa1409560-mRNA-1 |
| tig0023526 | CDS | 69833 | 69886 | 69833 | ID=Msa1409560-mRNA-1:cds;Parent=Msa1409560-mRNA-1 |
| tig0023526 | CDS | 69688 | 69765 | 69688 | ID=Msa1409560-mRNA-1:cds;Parent=Msa1409560-mRNA-1 |
| tig0023526 | CDS | 68242 | 68355 | 68242 | ID=Msa1409560-mRNA-1:cds;Parent=Msa1409560-mRNA-1 |
| tig0023526 | CDS | 66285 | 66400 | 66285 | ID=Msa1409560-mRNA-1:cds;Parent=Msa1409560-mRNA-1 |
| tig0023526 | CDS | 65826 | 66165 | 65826 | ID=Msa1409560-mRNA-1:cds;Parent=Msa1409560-mRNA-1 |
| tig0023526 | three_prime_UTR | 65724 | 65825 | 65724 | ID=Msa1409560-mRNA-1:three_prime_utr;Parent=Msa1409560-mRNA-1 |
| tig0023526 | three_prime_UTR | 65242 | 65629 | 65242 | ID=Msa1409560-mRNA-1:three_prime_utr;Parent=Msa1409560-mRNA-1 |
| Gene Sequence |
| Protein sequence |
