Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1377790 | XP_013458716.1 | 96.751 | 708 | 21 | 1 | 1 | 708 | 1 | 706 | 0.0 | 1385 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1377790 | sp|Q9LTY1|MAD1_ARATH | 62.999 | 727 | 247 | 7 | 1 | 707 | 1 | 725 | 0.0 | 883 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1377790 | A0A072UUK2 | 96.751 | 708 | 21 | 1 | 1 | 708 | 1 | 706 | 0.0 | 1385 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0071090 | Msa1377790 | 0.802725 | 4.895446e-49 | -8.615850e-47 |
| Msa0071250 | Msa1377790 | 0.806503 | 7.968934e-50 | -8.615850e-47 |
| Msa0106620 | Msa1377790 | 0.832490 | 9.178067e-56 | -8.615850e-47 |
| Msa0106710 | Msa1377790 | 0.802204 | 6.269706e-49 | -8.615850e-47 |
| Msa0119090 | Msa1377790 | 0.813808 | 2.121815e-51 | -8.615850e-47 |
| Msa1345810 | Msa1377790 | 0.832369 | 9.833215e-56 | -8.615850e-47 |
| Msa1349520 | Msa1377790 | 0.810418 | 1.164328e-50 | -8.615850e-47 |
| Msa1368360 | Msa1377790 | 0.803969 | 2.705061e-49 | -8.615850e-47 |
| Msa1377790 | Msa1393840 | -0.815178 | 1.055798e-51 | -8.615850e-47 |
| Msa1377790 | Msa1409560 | 0.825702 | 4.057542e-54 | -8.615850e-47 |
| Msa1377790 | Msa1413380 | 0.859263 | 4.667116e-63 | -8.615850e-47 |
| Msa0712560 | Msa1377790 | 0.805222 | 1.481157e-49 | -8.615850e-47 |
| Msa0752970 | Msa1377790 | 0.816622 | 5.029871e-52 | -8.615850e-47 |
| Msa0766760 | Msa1377790 | 0.804615 | 1.983937e-49 | -8.615850e-47 |
| Msa0162430 | Msa1377790 | 0.810021 | 1.417811e-50 | -8.615850e-47 |
| Msa0237210 | Msa1377790 | 0.829533 | 4.882436e-55 | -8.615850e-47 |
| Msa1236110 | Msa1377790 | -0.835408 | 1.707680e-56 | -8.615850e-47 |
| Msa1276970 | Msa1377790 | 0.802455 | 5.563867e-49 | -8.615850e-47 |
| Msa1340200 | Msa1377790 | 0.815179 | 1.055660e-51 | -8.615850e-47 |
| Msa0378970 | Msa1377790 | 0.815599 | 8.511761e-52 | -8.615850e-47 |
| Msa0389910 | Msa1377790 | 0.816192 | 6.275862e-52 | -8.615850e-47 |
| Msa0474940 | Msa1377790 | 0.813782 | 2.150471e-51 | -8.615850e-47 |
| Msa0249310 | Msa1377790 | 0.827340 | 1.651605e-54 | -8.615850e-47 |
| Msa0249660 | Msa1377790 | -0.806386 | 8.435308e-50 | -8.615850e-47 |
| Msa0287790 | Msa1377790 | 0.853400 | 2.449589e-61 | -8.615850e-47 |
| Msa0296050 | Msa1377790 | -0.809731 | 1.636632e-50 | -8.615850e-47 |
| Msa0315690 | Msa1377790 | 0.825564 | 4.376288e-54 | -8.615850e-47 |
| Msa0333970 | Msa1377790 | -0.805180 | 1.512051e-49 | -8.615850e-47 |
| Msa1158390 | Msa1377790 | 0.803724 | 3.040505e-49 | -8.615850e-47 |
| Msa0855870 | Msa1377790 | 0.813710 | 2.230194e-51 | -8.615850e-47 |
| Msa0934140 | Msa1377790 | 0.801496 | 8.759380e-49 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1377790 | MtrunA17_Chr4g0076901 | 96.751 | 708 | 21 | 1 | 1 | 708 | 1 | 706 | 0.0 | 1385 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1377790 | AT5G49880.1 | 62.999 | 727 | 247 | 7 | 1 | 707 | 1 | 725 | 0.0 | 883 |
Find 152 sgRNAs with CRISPR-Local
Find 540 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| GTCTTAGACTATAGAGTTTA+AGG | 0.097063 | tig0019984:+16558 | Msa1377790:three_prime_UTR |
| AACCACTCTCAGCTCATTTA+AGG | 0.127080 | tig0019984:-12527 | Msa1377790:intergenic |
| GAACCTTATCATAAATTTAA+TGG | 0.187512 | tig0019984:+16531 | Msa1377790:exon |
| AGCTTCACCATTCTTCAAAT+TGG | 0.225489 | tig0019984:-12323 | Msa1377790:intergenic |
| AAGTTGCGCCTTTGGGGTTT+TGG | 0.228691 | tig0019984:+8208 | Msa1377790:five_prime_UTR |
| AAACATCTAGTTTCATCTTT+TGG | 0.232310 | tig0019984:+16852 | Msa1377790:three_prime_UTR |
| ATCAGGGAATACCAACATTT+TGG | 0.238178 | tig0019984:+15090 | Msa1377790:CDS |
| TGCGAAGGTTTGTCTCATTT+TGG | 0.238880 | tig0019984:-8878 | Msa1377790:intergenic |
| TTCTACAGGGAGTGATGTTT+TGG | 0.261658 | tig0019984:+9411 | Msa1377790:CDS |
| CAGCACTTCTATGGTTTGTT+TGG | 0.266549 | tig0019984:-13576 | Msa1377790:intergenic |
| TGATCATTCACAACTTAAAA+AGG | 0.271940 | tig0019984:+9010 | Msa1377790:CDS |
| CTTGAATTTGAATATGAATC+AGG | 0.287905 | tig0019984:+15073 | Msa1377790:CDS |
| TGAATAAAAGTTGCGCCTTT+GGG | 0.302332 | tig0019984:+8201 | None:intergenic |
| TTGAACTGTTTAGGAGAAAC+TGG | 0.306116 | tig0019984:+14262 | Msa1377790:intron |
| GGAAATTATGATTGAGTGTT+TGG | 0.313529 | tig0019984:-8597 | None:intergenic |
| TTGAATAAAAGTTGCGCCTT+TGG | 0.316012 | tig0019984:+8200 | None:intergenic |
| TTCAGAGATATCATTATTAG+AGG | 0.326892 | tig0019984:+12648 | Msa1377790:CDS |
| GAAAGGATGAAACATGTTAC+AGG | 0.330915 | tig0019984:-16817 | Msa1377790:intergenic |
| GACAAAGCAACATCTTTAGA+AGG | 0.333909 | tig0019984:+8933 | Msa1377790:CDS |
| CTAAAGATGTTGCTTTGTCT+TGG | 0.341234 | tig0019984:-8929 | Msa1377790:intergenic |
| GAAACAACTGGAGGTGGCTT+TGG | 0.341324 | tig0019984:+11432 | Msa1377790:CDS |
| CATTGCAAACCTCTTTGAAT+TGG | 0.351624 | tig0019984:-9226 | Msa1377790:intergenic |
| TCAATTAAACACTGAACTTC+AGG | 0.351637 | tig0019984:+8848 | Msa1377790:CDS |
| GCTCAGATTGTGCCCTTTCC+CGG | 0.351664 | tig0019984:-10710 | Msa1377790:intergenic |
| CTTGTTGTAGCTTGAACAAA+TGG | 0.366662 | tig0019984:+9136 | Msa1377790:intron |
| AGTCCATTAAATTTATGATA+AGG | 0.377997 | tig0019984:-16534 | Msa1377790:intergenic |
| TCCCAGGAAGTTTCTTCTAC+AGG | 0.379616 | tig0019984:+9397 | Msa1377790:CDS |
| TATTAAAATCAGAGATTAAA+CGG | 0.384162 | tig0019984:+11521 | Msa1377790:CDS |
| AACTGCTCGCTTGAAACAAC+TGG | 0.389194 | tig0019984:+11420 | Msa1377790:CDS |
| ATTCTTGCCAATTTGAAGAA+TGG | 0.390364 | tig0019984:+12316 | Msa1377790:CDS |
| TAAAGATGTTGCTTTGTCTT+GGG | 0.400406 | tig0019984:-8928 | Msa1377790:intergenic |
| TCCCTGTAGAAGAAACTTCC+TGG | 0.401242 | tig0019984:-9399 | Msa1377790:intergenic |
| CTTTGAATTGGTCCTTAAGA+TGG | 0.406182 | tig0019984:-9214 | Msa1377790:intergenic |
| GATTAAACGGATTGAATTAA+CGG | 0.416637 | tig0019984:+11534 | Msa1377790:CDS |
| TCATCGGAACGTGGCCTCTT+CGG | 0.417235 | tig0019984:-8310 | Msa1377790:intergenic |
| TGCTTTGTCTTGGGCGGAAG+CGG | 0.418194 | tig0019984:-8919 | Msa1377790:intergenic |
| TTTGGTTAAACAATTGCAAC+AGG | 0.422570 | tig0019984:+9429 | Msa1377790:CDS |
| AGAGCAACTGGACCATCTTA+AGG | 0.435575 | tig0019984:+9202 | Msa1377790:CDS |
| GCTTTGGATGCTGCTGAGAT+TGG | 0.436789 | tig0019984:+11448 | Msa1377790:CDS |
| GATGAACACCAGCGATCAAA+TGG | 0.439362 | tig0019984:+14992 | Msa1377790:CDS |
| TGCAGCGTAAATCGTGTCAC+TGG | 0.446319 | tig0019984:-15019 | Msa1377790:intergenic |
| GCCGTCGCCGTCGCCGTCAT+CGG | 0.448004 | tig0019984:-8326 | Msa1377790:intergenic |
| ATGCTGCATAGATATCTTCC+AGG | 0.456384 | tig0019984:+16610 | Msa1377790:three_prime_UTR |
| TTGTTTGGCTTCATTATCTA+CGG | 0.458408 | tig0019984:-13561 | Msa1377790:intergenic |
| GGATCCGGCGGCAGCGGTGG+AGG | 0.459538 | tig0019984:+8372 | Msa1377790:CDS |
| GAAGAATTGAAGAGTCAATC+AGG | 0.460323 | tig0019984:+13641 | Msa1377790:CDS |
| CATCGGTGCCTGATAGTTGT+GGG | 0.460974 | tig0019984:+16680 | Msa1377790:three_prime_UTR |
| AGACCTGCTTAAAGAGCAAC+TGG | 0.463462 | tig0019984:+9190 | Msa1377790:CDS |
| AAGTAGTGCTAATCCCATTC+AGG | 0.466808 | tig0019984:+12357 | Msa1377790:CDS |
| GGAAAAGAGCCGCCGGGAAA+GGG | 0.468010 | tig0019984:+10698 | Msa1377790:CDS |
| GAGGGAAATACAACCTGAAT+GGG | 0.468113 | tig0019984:-12370 | Msa1377790:intergenic |
| CTGGGATTCCATTTGATCGC+TGG | 0.470960 | tig0019984:-15000 | Msa1377790:intergenic |
| CAAGAACTCGCTGCTTCTAA+AGG | 0.472308 | tig0019984:+8753 | Msa1377790:CDS |
| TCTTCGGTGGCGGAGGAGTA+CGG | 0.473231 | tig0019984:-8294 | Msa1377790:intergenic |
| CGTGGCCTCTTCGGTGGCGG+AGG | 0.474010 | tig0019984:-8301 | Msa1377790:intergenic |
| ACTCCAGGATCAACTCTTGA+AGG | 0.475492 | tig0019984:+8788 | Msa1377790:CDS |
| AAGCAGGTCTGCTTCTCTCT+CGG | 0.477842 | tig0019984:-9177 | Msa1377790:intergenic |
| GATTCTAGAAATAGAAAAGT+TGG | 0.479879 | tig0019984:-9036 | Msa1377790:intergenic |
| CACTGGAGAGGGAGAGTGAC+CGG | 0.480225 | tig0019984:+12620 | Msa1377790:CDS |
| TGTAAAGCTGCAAATTTAGC+AGG | 0.480888 | tig0019984:-10843 | Msa1377790:intergenic |
| AGAGGGAAATACAACCTGAA+TGG | 0.481847 | tig0019984:-12371 | Msa1377790:intergenic |
| CACATATCAGTGTCGCCAAA+TGG | 0.482171 | tig0019984:+8417 | Msa1377790:CDS |
| CTATGAGGATCCGGCGGCAG+CGG | 0.485300 | tig0019984:+8366 | Msa1377790:CDS |
| TCAGCCTGAGGTATCTCGTC+AGG | 0.487574 | tig0019984:+15309 | Msa1377790:CDS |
| AAGAATAAAGTCACTGGAGA+GGG | 0.490630 | tig0019984:+12609 | Msa1377790:CDS |
| TGCTTCTAAAGGCCGTGAAA+AGG | 0.491539 | tig0019984:+8764 | Msa1377790:CDS |
| CCCAGGTTGAGATATTCGTT+CGG | 0.491573 | tig0019984:+16450 | Msa1377790:intron |
| GGTTCCTCCACCGCTGCCGC+CGG | 0.494163 | tig0019984:-8376 | Msa1377790:intergenic |
| ATCTGAGCTATCTAAACTAC+AGG | 0.495023 | tig0019984:+10725 | Msa1377790:CDS |
| TGAGGATCCGGCGGCAGCGG+TGG | 0.495529 | tig0019984:+8369 | Msa1377790:CDS |
| GGTCCAGTTGCTCTTTAAGC+AGG | 0.500008 | tig0019984:-9193 | Msa1377790:intergenic |
| AGGAAAAGAGCCGCCGGGAA+AGG | 0.500081 | tig0019984:+10697 | Msa1377790:CDS |
| GTATCTTAATTTCCTCATGT+TGG | 0.507329 | tig0019984:-12558 | Msa1377790:intergenic |
| CCCAGGAAGTTTCTTCTACA+GGG | 0.507888 | tig0019984:+9398 | Msa1377790:CDS |
| GAACGTGGCCTCTTCGGTGG+CGG | 0.508356 | tig0019984:-8304 | Msa1377790:intergenic |
| GATATCATTATTAGAGGCAA+AGG | 0.509270 | tig0019984:+12654 | Msa1377790:CDS |
| GCATCGGTGCCTGATAGTTG+TGG | 0.509275 | tig0019984:+16679 | Msa1377790:three_prime_UTR |
| GCTTGTTATCTATGAGGATC+CGG | 0.510386 | tig0019984:+8357 | Msa1377790:CDS |
| AGGCCGTGAAAAGGCACTCC+AGG | 0.512926 | tig0019984:+8773 | Msa1377790:CDS |
| TTCCTTCTACAGTTAGGTCA+TGG | 0.513722 | tig0019984:+13488 | Msa1377790:intron |
| AAATCTCACAGCACGCCCTC+CGG | 0.515186 | tig0019984:-14492 | Msa1377790:intergenic |
| TCAACATCTTACCAAAATGT+TGG | 0.516170 | tig0019984:-15101 | Msa1377790:intergenic |
| TTGAATTTGAATATGAATCA+GGG | 0.517570 | tig0019984:+15074 | Msa1377790:CDS |
| TGCTGAAACTGAAGCTGTGT+TGG | 0.522026 | tig0019984:+11480 | Msa1377790:CDS |
| GAAAGACTCCACTGTTATGT+TGG | 0.523713 | tig0019984:-16501 | Msa1377790:intergenic |
| TGCTGGAGGAAAAGAGCCGC+CGG | 0.524219 | tig0019984:+10691 | Msa1377790:CDS |
| AAGTTCAAAACTCCACCCTC+TGG | 0.525027 | tig0019984:-16739 | Msa1377790:intergenic |
| TTTAGGAGAAACTGGAAAGC+TGG | 0.527669 | tig0019984:+14270 | Msa1377790:intron |
| TCTCTATGGTCTCTGAAAGA+TGG | 0.530121 | tig0019984:-8965 | Msa1377790:intergenic |
| GGCGGAAGCGGCATGAGACT+CGG | 0.530624 | tig0019984:-8907 | Msa1377790:intergenic |
| GTTATGTTGGCAGTAAAAGC+AGG | 0.531953 | tig0019984:-16488 | Msa1377790:intergenic |
| GCTGGTGGAGAGCTACATAT+CGG | 0.532673 | tig0019984:+14288 | Msa1377790:CDS |
| AGCAAGAAGAATAAAGTCAC+TGG | 0.533486 | tig0019984:+12603 | Msa1377790:CDS |
| CGCACAGCTTGTTATCTATG+AGG | 0.533714 | tig0019984:+8351 | Msa1377790:CDS |
| ACCTGGCATCTCATGTTTCG+AGG | 0.534847 | tig0019984:+10815 | Msa1377790:CDS |
| CCTCCTTCAAGAGTTGATCC+TGG | 0.535275 | tig0019984:-8791 | Msa1377790:intergenic |
| TTAAGGAATGATGTTTCTTG+AGG | 0.535938 | tig0019984:+16575 | Msa1377790:three_prime_UTR |
| ATGATATCTCTGAACGGAGC+CGG | 0.537996 | tig0019984:-12639 | Msa1377790:intergenic |
| TAGCTGACTAACTAGTTGCC+TGG | 0.538855 | tig0019984:-16628 | Msa1377790:intergenic |
| ACATTGACAACTTACATTAG+CGG | 0.540144 | tig0019984:-9060 | Msa1377790:intergenic |
| AAGAGGCCACGTTCCGATGA+CGG | 0.543240 | tig0019984:+8313 | Msa1377790:CDS |
| TCCTCGAAACATGAGATGCC+AGG | 0.545495 | tig0019984:-10816 | Msa1377790:intergenic |
| TGAAATTCTGTCTGCAAACA+CGG | 0.545580 | tig0019984:-14464 | Msa1377790:intergenic |
| AATTTGAAGAATGGTGAAGC+TGG | 0.552951 | tig0019984:+12325 | Msa1377790:CDS |
| TCGCTTGAAACAACTGGAGG+TGG | 0.553739 | tig0019984:+11426 | Msa1377790:CDS |
| TTTAACAGTGTTCCAGAGGG+TGG | 0.555023 | tig0019984:+16727 | Msa1377790:three_prime_UTR |
| TCCGATGACGGCGACGGCGA+CGG | 0.558508 | tig0019984:+8325 | Msa1377790:CDS |
| CTATATTTGGCAGATTGTGA+TGG | 0.562845 | tig0019984:+14970 | Msa1377790:intron |
| CCCTGTAGAAGAAACTTCCT+GGG | 0.564281 | tig0019984:-9398 | Msa1377790:intergenic |
| TAGAGGATCAAATATCATCA+TGG | 0.572164 | tig0019984:+10772 | Msa1377790:CDS |
| ACATCTTTAGAAGGGAAGCT+AGG | 0.573337 | tig0019984:+8942 | Msa1377790:CDS |
| TCGGAACGTGGCCTCTTCGG+TGG | 0.574434 | tig0019984:-8307 | None:intergenic |
| GAATAAAAGTTGCGCCTTTG+GGG | 0.579802 | tig0019984:+8202 | None:intergenic |
| CTTACCTGACGAGATACCTC+AGG | 0.581003 | tig0019984:-15313 | Msa1377790:intergenic |
| GTGCATAGCATGTGCTCGGA+GGG | 0.581042 | tig0019984:-8397 | Msa1377790:intergenic |
| GTACTCCTCCGCCACCGAAG+AGG | 0.584759 | tig0019984:+8296 | Msa1377790:CDS |
| ACAAAGCAACATCTTTAGAA+GGG | 0.593342 | tig0019984:+8934 | Msa1377790:CDS |
| AATTTACAGTACACAGAAGG+AGG | 0.597563 | tig0019984:+11390 | Msa1377790:CDS |
| TCTTAAGGACCAATTCAAAG+AGG | 0.599055 | tig0019984:+9217 | Msa1377790:CDS |
| AAAGGATGAAACATGTTACA+GGG | 0.602975 | tig0019984:-16816 | Msa1377790:intergenic |
| GGTAATTTACAGTACACAGA+AGG | 0.606067 | tig0019984:+11387 | Msa1377790:CDS |
| CCGTCGCCGTCATCGGAACG+TGG | 0.606794 | tig0019984:-8319 | Msa1377790:intergenic |
| CACCTTAAATGAGCTGAGAG+TGG | 0.608157 | tig0019984:+12525 | Msa1377790:CDS |
| GCAGCGTAAATCGTGTCACT+GGG | 0.613627 | tig0019984:-15018 | Msa1377790:intergenic |
| CAATACAAAAGTTCTGCGGA+TGG | 0.618353 | tig0019984:+13526 | Msa1377790:CDS |
| GAGACTCGGCTTGTATGCGA+AGG | 0.619176 | tig0019984:-8893 | Msa1377790:intergenic |
| GGTTAATAATCGCCAACATG+AGG | 0.626687 | tig0019984:+12546 | Msa1377790:CDS |
| CCACGTTCCGATGACGGCGA+CGG | 0.626939 | tig0019984:+8319 | Msa1377790:CDS |
| AGATGTTGCTTTGTCTTGGG+CGG | 0.631632 | tig0019984:-8925 | Msa1377790:intergenic |
| GCTGGAGGAAAAGAGCCGCC+GGG | 0.633967 | tig0019984:+10692 | Msa1377790:CDS |
| GAAGAATAAAGTCACTGGAG+AGG | 0.635917 | tig0019984:+12608 | Msa1377790:CDS |
| AGTACACAGAAGGAGGGTGA+AGG | 0.638528 | tig0019984:+11397 | Msa1377790:CDS |
| CACTAGAGAAGCGAGAAGAG+AGG | 0.638861 | tig0019984:+14344 | Msa1377790:CDS |
| CTAATAATGATATCTCTGAA+CGG | 0.639682 | tig0019984:-12645 | Msa1377790:intergenic |
| AGGAGAAACTGGAAAGCTGG+TGG | 0.645216 | tig0019984:+14273 | Msa1377790:intron |
| ATATGTGCATAGCATGTGCT+CGG | 0.645443 | tig0019984:-8401 | Msa1377790:intergenic |
| CACTGAGAGGAAGAAATCTG+TGG | 0.647981 | tig0019984:+8710 | Msa1377790:CDS |
| TGAAATCCCCAAAACCCCAA+AGG | 0.648069 | tig0019984:-8216 | Msa1377790:intergenic |
| TTTGAAGGAGAAACTGCTGG+AGG | 0.658729 | tig0019984:+10677 | Msa1377790:CDS |
| TGCTCGCTTGAAACAACTGG+AGG | 0.661475 | tig0019984:+11423 | Msa1377790:CDS |
| TGTGCATAGCATGTGCTCGG+AGG | 0.667920 | tig0019984:-8398 | Msa1377790:intergenic |
| TCTTTCAGAGACCATAGAGA+GGG | 0.673302 | tig0019984:+8968 | Msa1377790:CDS |
| ATGACATGACAGACACTGAG+AGG | 0.677214 | tig0019984:+8697 | Msa1377790:intron |
| TCATTACACATCTCAGCCTG+AGG | 0.681344 | tig0019984:+15297 | Msa1377790:CDS |
| CCAGGATCAACTCTTGAAGG+AGG | 0.683215 | tig0019984:+8791 | Msa1377790:CDS |
| CTGCCAATACAAAAGTTCTG+CGG | 0.683446 | tig0019984:+13522 | Msa1377790:CDS |
| GCAGCTAGCAGTTGTCACAG+AGG | 0.683964 | tig0019984:+12276 | Msa1377790:intron |
| ATTTACAGTACACAGAAGGA+GGG | 0.690417 | tig0019984:+11391 | Msa1377790:CDS |
| TGTTATCTATGAGGATCCGG+CGG | 0.704459 | tig0019984:+8360 | Msa1377790:CDS |
| CAGATTGTGCCCTTTCCCGG+CGG | 0.704598 | tig0019984:-10707 | Msa1377790:intergenic |
| ATCTTTCAGAGACCATAGAG+AGG | 0.704981 | tig0019984:+8967 | Msa1377790:CDS |
| TTGATGATTAAAGACATACC+TGG | 0.713365 | tig0019984:+10798 | Msa1377790:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | TATTATTTTTATTTTGTGTT+AGG | + | tig0019984:9619-9638 | Msa1377790:intron | 10.0% |
| !!! | TTTTATTTTCTTAAATCTTT+TGG | + | tig0019984:9716-9735 | Msa1377790:intron | 10.0% |
| !!! | TTTATTTTCTTAAATCTTTT+GGG | + | tig0019984:9717-9736 | Msa1377790:intron | 10.0% |
| !! | TGATAAATTAATAAGTTAAA+TGG | - | tig0019984:12405-12424 | Msa1377790:intergenic | 10.0% |
| !!! | CACATTATTGTTTTATTAAA+TGG | + | tig0019984:9642-9661 | Msa1377790:intron | 15.0% |
| !! | ATAAAGTGAAAAAAAATCAA+TGG | - | tig0019984:9871-9890 | Msa1377790:intergenic | 15.0% |
| !!! | TAATTTTGTAGGATTAAATT+AGG | + | tig0019984:10453-10472 | Msa1377790:intron | 15.0% |
| !! | TATTAAAATCAGAGATTAAA+CGG | + | tig0019984:11521-11540 | Msa1377790:CDS | 15.0% |
| !!! | TAATTTTTTTCAGAAACTTA+TGG | + | tig0019984:12688-12707 | Msa1377790:intron | 15.0% |
| !! | TATAGACGATTTAATAAAAA+AGG | - | tig0019984:13382-13401 | Msa1377790:intergenic | 15.0% |
| !!! | AAATATTTTCAAAATACAGA+AGG | + | tig0019984:14006-14025 | Msa1377790:intron | 15.0% |
| !! | TACTATCTTTCAATATAAAA+TGG | + | tig0019984:14565-14584 | Msa1377790:intron | 15.0% |
| !!! | TTAAAAATGTTGAATTTTGT+AGG | + | tig0019984:15150-15169 | Msa1377790:intron | 15.0% |
| !!! | TAAAAATGTTGAATTTTGTA+GGG | + | tig0019984:15151-15170 | Msa1377790:intron | 15.0% |
| !!! | TTTTGTTTTATTTTCATAAC+AGG | + | tig0019984:15270-15289 | Msa1377790:intron | 15.0% |
| !! | TGAAAAATATTGCAATATTA+TGG | - | tig0019984:15343-15362 | Msa1377790:intergenic | 15.0% |
| !!! | AAAAATTAATTTTTGTGTTG+GGG | - | tig0019984:15417-15436 | Msa1377790:intergenic | 15.0% |
| !!! | CAAAAATTAATTTTTGTGTT+GGG | - | tig0019984:15418-15437 | Msa1377790:intergenic | 15.0% |
| !!! | ACAAAAATTAATTTTTGTGT+TGG | - | tig0019984:15419-15438 | Msa1377790:intergenic | 15.0% |
| !!! | TTTTTTACTCAAGATATTAT+AGG | - | tig0019984:16794-16813 | Msa1377790:intergenic | 15.0% |
| !! | AATCATAATTTCCAAAAACT+CGG | + | tig0019984:8607-8626 | Msa1377790:CDS | 20.0% |
| !!! | TTCATGTTTCTTTTTTTTAG+TGG | + | tig0019984:9279-9298 | Msa1377790:intron | 20.0% |
| !!! | TCATGTTTCTTTTTTTTAGT+GGG | + | tig0019984:9280-9299 | Msa1377790:intron | 20.0% |
| !!! | TATTGTTTTATTAAATGGTC+TGG | + | tig0019984:9647-9666 | Msa1377790:intron | 20.0% |
| !!! | AATCTTTTGGGATATTTTTT+TGG | + | tig0019984:9729-9748 | Msa1377790:intron | 20.0% |
| !! | AAAAATCAATGGTATCTTTA+TGG | - | tig0019984:9860-9879 | Msa1377790:intergenic | 20.0% |
| !! | ATATAAGTTAAATTCATCCA+TGG | + | tig0019984:10101-10120 | Msa1377790:intron | 20.0% |
| !!! | GTTTCTATTATTATGAGTTT+TGG | + | tig0019984:10223-10242 | Msa1377790:intron | 20.0% |
| !! | TGAATAGCAATTATTTGTTT+AGG | + | tig0019984:10409-10428 | Msa1377790:intron | 20.0% |
| !! | GAATAGCAATTATTTGTTTA+GGG | + | tig0019984:10410-10429 | Msa1377790:intron | 20.0% |
| !! | TTAATCCTACAAAATTAACT+TGG | - | tig0019984:10450-10469 | Msa1377790:intergenic | 20.0% |
| !!! | AGGCTAACTTTTATTTTTTT+TGG | + | tig0019984:10473-10492 | Msa1377790:intron | 20.0% |
| !!! | GGCTAACTTTTATTTTTTTT+GGG | + | tig0019984:10474-10493 | Msa1377790:intron | 20.0% |
| !!! | GCTAACTTTTATTTTTTTTG+GGG | + | tig0019984:10475-10494 | Msa1377790:intron | 20.0% |
| !!! | CTAACTTTTATTTTTTTTGG+GGG | + | tig0019984:10476-10495 | Msa1377790:intron | 20.0% |
| !! | CAGATATATATTAACAGAAA+TGG | - | tig0019984:11181-11200 | Msa1377790:intergenic | 20.0% |
| !!! | TGAATTAATGGATTAATCTT+TGG | + | tig0019984:11722-11741 | Msa1377790:intron | 20.0% |
| !! | AAGTTATATAGTTAGGTTTA+AGG | + | tig0019984:11800-11819 | Msa1377790:intron | 20.0% |
| !!! | AATTTAAGATATATCACGAA+AGG | + | tig0019984:11847-11866 | Msa1377790:intron | 20.0% |
| !!! | ATTTAAGATATATCACGAAA+GGG | + | tig0019984:11848-11867 | Msa1377790:intron | 20.0% |
| !! | TTTAACACATTCTTTATGAT+TGG | + | tig0019984:12834-12853 | Msa1377790:intron | 20.0% |
| !! | TTTACATCATTCTTTATTGA+TGG | - | tig0019984:12977-12996 | Msa1377790:intergenic | 20.0% |
| !! | AAAAAATAGATGTTCAATAG+AGG | - | tig0019984:13086-13105 | Msa1377790:intergenic | 20.0% |
| !! | AATATTAAATCGTCTATATG+AGG | + | tig0019984:13178-13197 | Msa1377790:intron | 20.0% |
| !! | ATATTAAATCGTCTATATGA+GGG | + | tig0019984:13179-13198 | Msa1377790:intron | 20.0% |
| !! | GATTTAATAAAAAAGGCAAA+GGG | - | tig0019984:13375-13394 | Msa1377790:intergenic | 20.0% |
| !! | ATAATACAAGCATAAGTAAT+TGG | + | tig0019984:13732-13751 | Msa1377790:intron | 20.0% |
| !!! | TTATTTTTAGCTGTTTTCAT+AGG | - | tig0019984:13885-13904 | Msa1377790:intergenic | 20.0% |
| !! | TCAAAATATTGTATGTGTTA+AGG | + | tig0019984:14159-14178 | Msa1377790:intron | 20.0% |
| !! | AGATAGTAATAAAAAGATTG+AGG | - | tig0019984:14553-14572 | Msa1377790:intergenic | 20.0% |
| !! | TAAAAATAAACCCAGAATAA+TGG | - | tig0019984:14698-14717 | Msa1377790:intergenic | 20.0% |
| !! | TTGAATTTGAATATGAATCA+GGG | + | tig0019984:15074-15093 | Msa1377790:CDS | 20.0% |
| !!! | GTTCTGTTTTTTTATGAATA+AGG | - | tig0019984:16332-16351 | Msa1377790:intergenic | 20.0% |
| !! | GAACCTTATCATAAATTTAA+TGG | + | tig0019984:16531-16550 | Msa1377790:exon | 20.0% |
| !! | AGTCCATTAAATTTATGATA+AGG | - | tig0019984:16537-16556 | Msa1377790:intergenic | 20.0% |
| !! | TGTTAAAAGTAAAAATGTGA+TGG | - | tig0019984:16714-16733 | Msa1377790:intergenic | 20.0% |
| !!! | TGTTTTTTCTTTCTTTTGAA+AGG | - | tig0019984:16837-16856 | Msa1377790:intergenic | 20.0% |
| !! | TTGATTTTCTGCTTTACTTA+AGG | - | tig0019984:8554-8573 | Msa1377790:intergenic | 25.0% |
| !!! | TTTTAAGTTGTGAATGATCA+TGG | - | tig0019984:9010-9029 | Msa1377790:intergenic | 25.0% |
| ! | TGATCATTCACAACTTAAAA+AGG | + | tig0019984:9010-9029 | Msa1377790:CDS | 25.0% |
| !! | GATTCTAGAAATAGAAAAGT+TGG | - | tig0019984:9039-9058 | Msa1377790:intergenic | 25.0% |
| ! | AGAATGATTGATAGATATGA+AGG | - | tig0019984:9099-9118 | Msa1377790:intergenic | 25.0% |
| !! | TTTGCTTTGTCTTTTATCTT+GGG | + | tig0019984:9471-9490 | Msa1377790:intron | 25.0% |
| !!! | ATCTTTTGATTGTTTGTGTA+AGG | + | tig0019984:9509-9528 | Msa1377790:intron | 25.0% |
| ! | AAAATAAAAAGACACGATTC+AGG | - | tig0019984:9705-9724 | Msa1377790:intergenic | 25.0% |
| !! | AAAAACGCAGTCATATATTT+TGG | - | tig0019984:9762-9781 | Msa1377790:intergenic | 25.0% |
| ! | TAAATTTGACACCTGATATT+TGG | + | tig0019984:9830-9849 | Msa1377790:intron | 25.0% |
| ! | TTTATGGTATTCCAAATATC+AGG | - | tig0019984:9844-9863 | Msa1377790:intergenic | 25.0% |
| !! | TTTCTTCTTCCTTTTCTTTT+AGG | + | tig0019984:9900-9919 | Msa1377790:intron | 25.0% |
| !! | TTCTTCTTCCTTTTCTTTTA+GGG | + | tig0019984:9901-9920 | Msa1377790:intron | 25.0% |
| !!! | TTTTTCTAAAACTACATGCT+TGG | + | tig0019984:10077-10096 | Msa1377790:intron | 25.0% |
| !!! | TTTTCTAAAACTACATGCTT+GGG | + | tig0019984:10078-10097 | Msa1377790:intron | 25.0% |
| ! | TCTCATATTAGATTGTGTTA+TGG | + | tig0019984:10384-10403 | Msa1377790:intron | 25.0% |
| !!! | AATTTTAGGAATCTGAAGTA+AGG | + | tig0019984:10613-10632 | Msa1377790:intron | 25.0% |
| !!! | ATTTTAGGAATCTGAAGTAA+GGG | + | tig0019984:10614-10633 | Msa1377790:intron | 25.0% |
| !!! | CTAACTTTTTCATATTTGAC+TGG | - | tig0019984:10755-10774 | Msa1377790:intergenic | 25.0% |
| ! | GTCAAATATGAAAAAGTTAG+AGG | + | tig0019984:10755-10774 | Msa1377790:CDS | 25.0% |
| !! | TAGCATTGAAATATTCTTTC+CGG | + | tig0019984:10949-10968 | Msa1377790:intron | 25.0% |
| ! | TATAAATCCGTAAAAGGAAA+AGG | - | tig0019984:11084-11103 | Msa1377790:intergenic | 25.0% |
| !! | TCCTTTTACGGATTTATAAA+TGG | + | tig0019984:11086-11105 | Msa1377790:intron | 25.0% |
| !!! | GATTAAACGGATTGAATTAA+CGG | + | tig0019984:11534-11553 | Msa1377790:CDS | 25.0% |
| ! | TAAATCCAAGATTTCAAAGA+TGG | - | tig0019984:11620-11639 | Msa1377790:intergenic | 25.0% |
| !! | GACATCTTGTTATGAATTAA+TGG | + | tig0019984:11710-11729 | Msa1377790:intron | 25.0% |
| !!! | TTTTGAGTCCTACTTTATTT+GGG | - | tig0019984:11782-11801 | Msa1377790:intergenic | 25.0% |
| ! | GACTCAAAAGTTATATAGTT+AGG | + | tig0019984:11793-11812 | Msa1377790:intron | 25.0% |
| !! | TATATAGTTAGGTTTAAGGT+AGG | + | tig0019984:11804-11823 | Msa1377790:intron | 25.0% |
| ! | ATAGAATGCCCAAAATTTAT+AGG | - | tig0019984:12126-12145 | Msa1377790:intergenic | 25.0% |
| !!! | TTTCTTGCTTATTTTTTCGT+TGG | + | tig0019984:12440-12459 | Msa1377790:intron | 25.0% |
| ! | CTAATAATGATATCTCTGAA+CGG | - | tig0019984:12648-12667 | Msa1377790:intergenic | 25.0% |
| ! | TTCAGAGATATCATTATTAG+AGG | + | tig0019984:12648-12667 | Msa1377790:CDS | 25.0% |
| !!! | AACTGTTTCTATGTATGTAT+TGG | - | tig0019984:12791-12810 | Msa1377790:intergenic | 25.0% |
| !! | TTCTAAAAAGTCAGTTAAGT+TGG | + | tig0019984:12864-12883 | Msa1377790:intron | 25.0% |
| ! | GCTTAAAAACATTTATAGAG+TGG | - | tig0019984:12902-12921 | Msa1377790:intergenic | 25.0% |
| ! | TATTAAATCGTCTATATGAG+GGG | + | tig0019984:13180-13199 | Msa1377790:intron | 25.0% |
| ! | CGATTTAATAAAAAAGGCAA+AGG | - | tig0019984:13376-13395 | Msa1377790:intergenic | 25.0% |
| ! | TGTTTAGTATCTATCATGTT+TGG | + | tig0019984:13779-13798 | Msa1377790:intron | 25.0% |
| !! | TATACAAACATTAGTTTCCT+TGG | - | tig0019984:13840-13859 | Msa1377790:intergenic | 25.0% |
| ! | CATATTTCATTTGTGTACTT+GGG | - | tig0019984:13926-13945 | Msa1377790:intergenic | 25.0% |
| !! | AAATTTTACTGACAGAAGTT+AGG | + | tig0019984:14796-14815 | Msa1377790:intron | 25.0% |
| !! | AATTTTACTGACAGAAGTTA+GGG | + | tig0019984:14797-14816 | Msa1377790:intron | 25.0% |
| ! | CTTGAATTTGAATATGAATC+AGG | + | tig0019984:15073-15092 | Msa1377790:CDS | 25.0% |
| ! | GAAATATCAGAATTTAGAAG+AGG | - | tig0019984:15793-15812 | Msa1377790:intergenic | 25.0% |
| ! | TTTATACACCAAAAACCTTT+AGG | + | tig0019984:15968-15987 | Msa1377790:intron | 25.0% |
| ! | TTATACACCAAAAACCTTTA+GGG | + | tig0019984:15969-15988 | Msa1377790:intron | 25.0% |
| !!! | AAACATCTAGTTTCATCTTT+TGG | + | tig0019984:16852-16871 | Msa1377790:three_prime_UTR | 25.0% |
| AAACAAACAAACCAACCATT+TGG | - | tig0019984:8435-8454 | Msa1377790:intergenic | 30.0% | |
| GGAAATTATGATTGAGTGTT+TGG | - | tig0019984:8600-8619 | Msa1377790:intergenic | 30.0% | |
| TCAATTAAACACTGAACTTC+AGG | + | tig0019984:8848-8867 | Msa1377790:CDS | 30.0% | |
| !! | TAAAGATGTTGCTTTGTCTT+GGG | - | tig0019984:8931-8950 | Msa1377790:intergenic | 30.0% |
| ! | ACAAAGCAACATCTTTAGAA+GGG | + | tig0019984:8934-8953 | Msa1377790:CDS | 30.0% |
| ACATTGACAACTTACATTAG+CGG | - | tig0019984:9063-9082 | Msa1377790:intergenic | 30.0% | |
| TTTGGTTAAACAATTGCAAC+AGG | + | tig0019984:9429-9448 | Msa1377790:CDS | 30.0% | |
| ! | GTTTGCTTTGTCTTTTATCT+TGG | + | tig0019984:9470-9489 | Msa1377790:intron | 30.0% |
| CAAACAATCAAAAGATCAAG+AGG | - | tig0019984:9505-9524 | Msa1377790:intergenic | 30.0% | |
| TCAAGTGACATGATCATAAA+TGG | + | tig0019984:9578-9597 | Msa1377790:intron | 30.0% | |
| TGGATATATAAGATGAGGTT+TGG | + | tig0019984:9667-9686 | Msa1377790:intron | 30.0% | |
| GGATATATAAGATGAGGTTT+GGG | + | tig0019984:9668-9687 | Msa1377790:intron | 30.0% | |
| ! | TCTTCTTCCTTTTCTTTTAG+GGG | + | tig0019984:9902-9921 | Msa1377790:intron | 30.0% |
| !! | TTACCAAAGTATTGTTGTGA+AGG | + | tig0019984:10017-10036 | Msa1377790:intron | 30.0% |
| ATATAATAGATGCAACGTTC+AGG | - | tig0019984:10145-10164 | Msa1377790:intergenic | 30.0% | |
| CCAAAAGTGAATTTAACGTT+TGG | - | tig0019984:10249-10268 | Msa1377790:intergenic | 30.0% | |
| ! | CCAAACGTTAAATTCACTTT+TGG | + | tig0019984:10246-10265 | Msa1377790:intron | 30.0% |
| !! | GTTAAATTCACTTTTGGACT+TGG | + | tig0019984:10252-10271 | Msa1377790:intron | 30.0% |
| ! | TCCTACAAAATTAACTTGGA+CGG | - | tig0019984:10446-10465 | Msa1377790:intergenic | 30.0% |
| !!! | ACTTTTATTTTTTTTGGGGG+AGG | + | tig0019984:10479-10498 | Msa1377790:intron | 30.0% |
| !!! | CTTTTATTTTTTTTGGGGGA+GGG | + | tig0019984:10480-10499 | Msa1377790:intron | 30.0% |
| !!! | TTTTATTTTTTTTGGGGGAG+GGG | + | tig0019984:10481-10500 | Msa1377790:intron | 30.0% |
| TACATTACTCAGATTACTAC+AGG | - | tig0019984:10578-10597 | Msa1377790:intergenic | 30.0% | |
| CCTAAAATTGCAAAGTTAAC+TGG | - | tig0019984:10602-10621 | Msa1377790:intergenic | 30.0% | |
| ! | CCAGTTAACTTTGCAATTTT+AGG | + | tig0019984:10599-10618 | Msa1377790:intron | 30.0% |
| TAGAGGATCAAATATCATCA+TGG | + | tig0019984:10772-10791 | Msa1377790:CDS | 30.0% | |
| ! | TTGATGATTAAAGACATACC+TGG | + | tig0019984:10798-10817 | Msa1377790:CDS | 30.0% |
| ! | AGCATTGAAATATTCTTTCC+GGG | + | tig0019984:10950-10969 | Msa1377790:intron | 30.0% |
| TCATAAACAAAAAGATCACC+CGG | - | tig0019984:10971-10990 | Msa1377790:intergenic | 30.0% | |
| TTCTCAAATATATGACGTCA+AGG | - | tig0019984:10997-11016 | Msa1377790:intergenic | 30.0% | |
| TATTTGAGAAAAGTTCCTAC+TGG | + | tig0019984:11007-11026 | Msa1377790:intron | 30.0% | |
| ! | GAGAGAGAAAAAGTATAACT+AGG | - | tig0019984:11036-11055 | Msa1377790:intergenic | 30.0% |
| ! | GACAATACCTTTTCCTTTTA+CGG | + | tig0019984:11074-11093 | Msa1377790:intron | 30.0% |
| GCCATTTATAAATCCGTAAA+AGG | - | tig0019984:11090-11109 | Msa1377790:intergenic | 30.0% | |
| !! | ACAATATTCTGGAATGTGTA+TGG | + | tig0019984:11217-11236 | Msa1377790:intron | 30.0% |
| TATCTTCTATAAATGCAGAG+AGG | + | tig0019984:11366-11385 | Msa1377790:intron | 30.0% | |
| GGATTTATTATCTGCTATTC+TGG | + | tig0019984:11633-11652 | Msa1377790:intron | 30.0% | |
| ! | TTTGAGTCCTACTTTATTTG+GGG | - | tig0019984:11781-11800 | Msa1377790:intergenic | 30.0% |
| !! | CTTTTGAGTCCTACTTTATT+TGG | - | tig0019984:11783-11802 | Msa1377790:intergenic | 30.0% |
| ACTTATGTATTTCCTTGGAA+TGG | - | tig0019984:11935-11954 | Msa1377790:intergenic | 30.0% | |
| TTCACACTTATGTATTTCCT+TGG | - | tig0019984:11940-11959 | Msa1377790:intergenic | 30.0% | |
| ! | AGCAACTGCCTATAAATTTT+GGG | + | tig0019984:12115-12134 | Msa1377790:intron | 30.0% |
| ATTCTTGCCAATTTGAAGAA+TGG | + | tig0019984:12316-12335 | Msa1377790:CDS | 30.0% | |
| GTTAAATGGTGACAAATAGA+GGG | - | tig0019984:12391-12410 | Msa1377790:intergenic | 30.0% | |
| AGTTAAATGGTGACAAATAG+AGG | - | tig0019984:12392-12411 | Msa1377790:intergenic | 30.0% | |
| GTATCTTAATTTCCTCATGT+TGG | - | tig0019984:12561-12580 | Msa1377790:intergenic | 30.0% | |
| GATATCATTATTAGAGGCAA+AGG | + | tig0019984:12654-12673 | Msa1377790:CDS | 30.0% | |
| ATGCGTATGAAGAAAAAGAA+GGG | - | tig0019984:12764-12783 | Msa1377790:intergenic | 30.0% | |
| ! | CATTCTTTATTGATGGATCA+AGG | - | tig0019984:12970-12989 | Msa1377790:intergenic | 30.0% |
| AATCACTCATTAAACAACCT+AGG | + | tig0019984:13037-13056 | Msa1377790:intron | 30.0% | |
| ATCACTCATTAAACAACCTA+GGG | + | tig0019984:13038-13057 | Msa1377790:intron | 30.0% | |
| TGAAAATGAAAACCAGAAAC+TGG | - | tig0019984:13445-13464 | Msa1377790:intergenic | 30.0% | |
| !! | TTGTTTTTCCTTCTACAGTT+AGG | + | tig0019984:13482-13501 | Msa1377790:intron | 30.0% |
| ! | TTGTTTGGCTTCATTATCTA+CGG | - | tig0019984:13564-13583 | Msa1377790:intergenic | 30.0% |
| ! | CACATAACTACAACTTTTCA+AGG | - | tig0019984:13674-13693 | Msa1377790:intergenic | 30.0% |
| CTTGAAAAGTTGTAGTTATG+TGG | + | tig0019984:13672-13691 | Msa1377790:intron | 30.0% | |
| TTGTAGTTATGTGGATTCTA+GGG | + | tig0019984:13681-13700 | Msa1377790:intron | 30.0% | |
| GGAAACTAATGTTTGTATAC+AGG | + | tig0019984:13841-13860 | Msa1377790:intron | 30.0% | |
| AACTAATGTTTGTATACAGG+AGG | + | tig0019984:13844-13863 | Msa1377790:intron | 30.0% | |
| GCATATTTCATTTGTGTACT+TGG | - | tig0019984:13927-13946 | Msa1377790:intergenic | 30.0% | |
| CATATTTCATTTGTGTCCTT+AGG | - | tig0019984:14062-14081 | Msa1377790:intergenic | 30.0% | |
| !!! | AGTATATAAGTTGCTGCTTT+TGG | + | tig0019984:14369-14388 | Msa1377790:intron | 30.0% |
| ! | TGGAAATGTTTTACACGAAA+TGG | + | tig0019984:14585-14604 | Msa1377790:intron | 30.0% |
| TTGAAAATATTGTAGCATCC+TGG | + | tig0019984:14646-14665 | Msa1377790:intron | 30.0% | |
| ! | ATCCTGGTAATGATGTAATT+GGG | + | tig0019984:14662-14681 | Msa1377790:intron | 30.0% |
| TAATGATGTAATTGGGAATG+TGG | + | tig0019984:14669-14688 | Msa1377790:intron | 30.0% | |
| AATGTGGAAACCATTATTCT+GGG | + | tig0019984:14685-14704 | Msa1377790:intron | 30.0% | |
| TGGTTGTCCATAACTATATT+TGG | + | tig0019984:14957-14976 | Msa1377790:intron | 30.0% | |
| CAATCTGCCAAATATAGTTA+TGG | - | tig0019984:14967-14986 | Msa1377790:intergenic | 30.0% | |
| TCAACATCTTACCAAAATGT+TGG | - | tig0019984:15104-15123 | Msa1377790:intergenic | 30.0% | |
| ! | AAACAATATTTTCCGCTACA+AGG | - | tig0019984:15482-15501 | Msa1377790:intergenic | 30.0% |
| AAGAAATAGAGGAAAATGGA+AGG | + | tig0019984:16291-16310 | Msa1377790:intron | 30.0% | |
| AGAAATAGAGGAAAATGGAA+GGG | + | tig0019984:16292-16311 | Msa1377790:intron | 30.0% | |
| GTCTTAGACTATAGAGTTTA+AGG | + | tig0019984:16558-16577 | Msa1377790:three_prime_UTR | 30.0% | |
| TTAAGGAATGATGTTTCTTG+AGG | + | tig0019984:16575-16594 | Msa1377790:three_prime_UTR | 30.0% | |
| AAAGGATGAAACATGTTACA+GGG | - | tig0019984:16819-16838 | Msa1377790:intergenic | 30.0% | |
| ! | TATATGTCGTACCGAGTTTT+TGG | - | tig0019984:8621-8640 | Msa1377790:intergenic | 35.0% |
| !! | CTAAAGATGTTGCTTTGTCT+TGG | - | tig0019984:8932-8951 | Msa1377790:intergenic | 35.0% |
| GACAAAGCAACATCTTTAGA+AGG | + | tig0019984:8933-8952 | Msa1377790:CDS | 35.0% | |
| !!! | TCTCTTTTTTTCCCTCTCTA+TGG | - | tig0019984:8982-9001 | Msa1377790:intergenic | 35.0% |
| ! | CTTGTTGTAGCTTGAACAAA+TGG | + | tig0019984:9136-9155 | Msa1377790:intron | 35.0% |
| CTTTGAATTGGTCCTTAAGA+TGG | - | tig0019984:9217-9236 | Msa1377790:intergenic | 35.0% | |
| TCTTAAGGACCAATTCAAAG+AGG | + | tig0019984:9217-9236 | Msa1377790:CDS | 35.0% | |
| CATTGCAAACCTCTTTGAAT+TGG | - | tig0019984:9229-9248 | Msa1377790:intergenic | 35.0% | |
| TGACATGATCATAAATGGAG+AGG | + | tig0019984:9583-9602 | Msa1377790:intron | 35.0% | |
| TGGTCTGGATATATAAGATG+AGG | + | tig0019984:9662-9681 | Msa1377790:intron | 35.0% | |
| ! | AAAGAGAAGGGTACAAACAA+GGG | - | tig0019984:9946-9965 | Msa1377790:intergenic | 35.0% |
| TGAAGGAGCTTGATATCAAT+TGG | + | tig0019984:10034-10053 | Msa1377790:intron | 35.0% | |
| GAAGGAGCTTGATATCAATT+GGG | + | tig0019984:10035-10054 | Msa1377790:intron | 35.0% | |
| ! | CTATTTTATCTCTAGGTCCA+TGG | - | tig0019984:10121-10140 | Msa1377790:intergenic | 35.0% |
| CATGGACCTAGAGATAAAAT+AGG | + | tig0019984:10119-10138 | Msa1377790:intron | 35.0% | |
| ! | TTCAGGCCTATTTTATCTCT+AGG | - | tig0019984:10128-10147 | Msa1377790:intergenic | 35.0% |
| ! | TGATGGTGTTCGGTATAAAT+TGG | + | tig0019984:10179-10198 | Msa1377790:intron | 35.0% |
| GATGGTGTTCGGTATAAATT+GGG | + | tig0019984:10180-10199 | Msa1377790:intron | 35.0% | |
| TGTTCATGCATAATATGCGT+AGG | + | tig0019984:10349-10368 | Msa1377790:intron | 35.0% | |
| GTTCATGCATAATATGCGTA+GGG | + | tig0019984:10350-10369 | Msa1377790:intron | 35.0% | |
| ! | AAAATTAACTTGGACGGTGA+GGG | - | tig0019984:10440-10459 | Msa1377790:intergenic | 35.0% |
| ! | ACCGTCCAAGTTAATTTTGT+AGG | + | tig0019984:10442-10461 | Msa1377790:intron | 35.0% |
| GTTTATGATGAGAATGCATC+TGG | - | tig0019984:10545-10564 | Msa1377790:intergenic | 35.0% | |
| ATCTGAGCTATCTAAACTAC+AGG | + | tig0019984:10725-10744 | Msa1377790:CDS | 35.0% | |
| TGTAAAGCTGCAAATTTAGC+AGG | - | tig0019984:10846-10865 | Msa1377790:intergenic | 35.0% | |
| !! | AAAGGTATTGTCAAGTCACA+TGG | - | tig0019984:11066-11085 | Msa1377790:intergenic | 35.0% |
| GTAAACGATGCACAATATTC+TGG | + | tig0019984:11206-11225 | Msa1377790:intron | 35.0% | |
| TCTCAATGTGAAAAGATCCT+AGG | - | tig0019984:11243-11262 | Msa1377790:intergenic | 35.0% | |
| ! | AGGATCTTTTCACATTGAGA+TGG | + | tig0019984:11243-11262 | Msa1377790:intron | 35.0% |
| !!! | ACATTGAGATGGCTTTTTTG+TGG | + | tig0019984:11254-11273 | Msa1377790:intron | 35.0% |
| !!! | CATTGAGATGGCTTTTTTGT+GGG | + | tig0019984:11255-11274 | Msa1377790:intron | 35.0% |
| !!! | ATTGAGATGGCTTTTTTGTG+GGG | + | tig0019984:11256-11275 | Msa1377790:intron | 35.0% |
| GGTAATTTACAGTACACAGA+AGG | + | tig0019984:11387-11406 | Msa1377790:CDS | 35.0% | |
| AATTTACAGTACACAGAAGG+AGG | + | tig0019984:11390-11409 | Msa1377790:CDS | 35.0% | |
| ATTTACAGTACACAGAAGGA+GGG | + | tig0019984:11391-11410 | Msa1377790:CDS | 35.0% | |
| CAAGATTTCAAAGATGGCAA+TGG | - | tig0019984:11614-11633 | Msa1377790:intergenic | 35.0% | |
| !! | CATTGCCATCTTTGAAATCT+TGG | + | tig0019984:11612-11631 | Msa1377790:intron | 35.0% |
| GTTAATGACGTTCAATGATC+TGG | + | tig0019984:11751-11770 | Msa1377790:intron | 35.0% | |
| ! | TTGAGTCCTACTTTATTTGG+GGG | - | tig0019984:11780-11799 | Msa1377790:intergenic | 35.0% |
| ! | TAGTTAGGTTTAAGGTAGGA+AGG | + | tig0019984:11808-11827 | Msa1377790:intron | 35.0% |
| AAAGGGATTTAGATGCTAGA+TGG | + | tig0019984:11865-11884 | Msa1377790:intron | 35.0% | |
| CTTAAATGTCATGCCTAGAA+TGG | + | tig0019984:11897-11916 | Msa1377790:intron | 35.0% | |
| TGATTATCTTGTCATGCTTC+TGG | + | tig0019984:12060-12079 | Msa1377790:intron | 35.0% | |
| !! | GCTTCTGGTGTATTTTGAAA+AGG | + | tig0019984:12075-12094 | Msa1377790:intron | 35.0% |
| TTGAAAAGGTTGAATGCTAC+TGG | + | tig0019984:12089-12108 | Msa1377790:intron | 35.0% | |
| TGAAAAGGTTGAATGCTACT+GGG | + | tig0019984:12090-12109 | Msa1377790:intron | 35.0% | |
| ! | CAGCAACTGCCTATAAATTT+TGG | + | tig0019984:12114-12133 | Msa1377790:intron | 35.0% |
| AGCTTCACCATTCTTCAAAT+TGG | - | tig0019984:12326-12345 | Msa1377790:intergenic | 35.0% | |
| AATTTGAAGAATGGTGAAGC+TGG | + | tig0019984:12325-12344 | Msa1377790:CDS | 35.0% | |
| !!! | ATTTTTTCGTTGGTCCATTC+AGG | + | tig0019984:12450-12469 | Msa1377790:intron | 35.0% |
| ! | AGATGATTCAAGTTCCTGAA+TGG | - | tig0019984:12467-12486 | Msa1377790:intergenic | 35.0% |
| AGCAAGAAGAATAAAGTCAC+TGG | + | tig0019984:12603-12622 | Msa1377790:CDS | 35.0% | |
| AAGAATAAAGTCACTGGAGA+GGG | + | tig0019984:12609-12628 | Msa1377790:CDS | 35.0% | |
| TCATTATTAGAGGCAAAGGT+TGG | + | tig0019984:12658-12677 | Msa1377790:intron | 35.0% | |
| CATGCGTATGAAGAAAAAGA+AGG | - | tig0019984:12765-12784 | Msa1377790:intergenic | 35.0% | |
| !!! | TTACCCTGTTTTTACACAAG+AGG | - | tig0019984:13276-13295 | Msa1377790:intergenic | 35.0% |
| ! | TTCATTTTGCAGCACTTCTA+TGG | - | tig0019984:13588-13607 | Msa1377790:intergenic | 35.0% |
| GAAGAATTGAAGAGTCAATC+AGG | + | tig0019984:13641-13660 | Msa1377790:CDS | 35.0% | |
| GTTGTAGTTATGTGGATTCT+AGG | + | tig0019984:13680-13699 | Msa1377790:intron | 35.0% | |
| TCTATCATGTTTGGATTGCT+TGG | + | tig0019984:13788-13807 | Msa1377790:intron | 35.0% | |
| ! | AAGCTTTGATAAACCTTCCA+AGG | + | tig0019984:13820-13839 | Msa1377790:intron | 35.0% |
| ! | CAAACATTAGTTTCCTTGGA+AGG | - | tig0019984:13836-13855 | Msa1377790:intergenic | 35.0% |
| AGCAGAGAAAAATCAACCTA+AGG | + | tig0019984:14043-14062 | Msa1377790:intron | 35.0% | |
| TTGAACTGTTTAGGAGAAAC+TGG | + | tig0019984:14262-14281 | Msa1377790:intron | 35.0% | |
| TGAAATTCTGTCTGCAAACA+CGG | - | tig0019984:14467-14486 | Msa1377790:intergenic | 35.0% | |
| ! | CAGACAGAATTTCAGTTTTC+CGG | + | tig0019984:14473-14492 | Msa1377790:CDS | 35.0% |
| !!! | CTGTGAGATTTTTGGTTACA+AGG | + | tig0019984:14504-14523 | Msa1377790:CDS | 35.0% |
| !!! | GAGATTTTTGGTTACAAGGT+TGG | + | tig0019984:14508-14527 | Msa1377790:intron | 35.0% |
| ! | CATCCTGGTAATGATGTAAT+TGG | + | tig0019984:14661-14680 | Msa1377790:intron | 35.0% |
| TTCCCAATTACATCATTACC+AGG | - | tig0019984:14667-14686 | Msa1377790:intergenic | 35.0% | |
| GAATGTGGAAACCATTATTC+TGG | + | tig0019984:14684-14703 | Msa1377790:intron | 35.0% | |
| GTAAGTGGTTTCTATAACAC+AGG | + | tig0019984:14758-14777 | Msa1377790:intron | 35.0% | |
| GGTTGTCAGCTTATCTAATT+TGG | - | tig0019984:14903-14922 | Msa1377790:intergenic | 35.0% | |
| AGTGTGAGCAAAAAGACAAT+CGG | - | tig0019984:14924-14943 | Msa1377790:intergenic | 35.0% | |
| ! | ATTGTCTTTTTGCTCACACT+TGG | + | tig0019984:14924-14943 | Msa1377790:intron | 35.0% |
| CTATATTTGGCAGATTGTGA+TGG | + | tig0019984:14970-14989 | Msa1377790:intron | 35.0% | |
| ! | ATCAGGGAATACCAACATTT+TGG | + | tig0019984:15090-15109 | Msa1377790:CDS | 35.0% |
| ! | CTTTGTTGTGCATCATAGAA+AGG | + | tig0019984:15538-15557 | Msa1377790:intron | 35.0% |
| TTTGTTTGAGTCACAACTTC+CGG | + | tig0019984:15845-15864 | Msa1377790:intron | 35.0% | |
| ! | AAATTAGTAATGGAGCTCTC+CGG | - | tig0019984:15867-15886 | Msa1377790:intergenic | 35.0% |
| ! | AAACACACCCTAAAGGTTTT+TGG | - | tig0019984:15979-15998 | Msa1377790:intergenic | 35.0% |
| !! | AAAAACCTTTAGGGTGTGTT+TGG | + | tig0019984:15978-15997 | Msa1377790:intron | 35.0% |
| AAGCCTAAGGGTCTATATTT+GGG | - | tig0019984:16204-16223 | Msa1377790:intergenic | 35.0% | |
| TAAGCCTAAGGGTCTATATT+TGG | - | tig0019984:16205-16224 | Msa1377790:intergenic | 35.0% | |
| CAAACAAAGCTTAAGCCTAA+GGG | - | tig0019984:16216-16235 | Msa1377790:intergenic | 35.0% | |
| GAAAAAAAGGAATGAGCAAG+TGG | + | tig0019984:16268-16287 | Msa1377790:intron | 35.0% | |
| GTGGAAGAAATAGAGGAAAA+TGG | + | tig0019984:16287-16306 | Msa1377790:intron | 35.0% | |
| GAAATAGAGGAAAATGGAAG+GGG | + | tig0019984:16293-16312 | Msa1377790:intron | 35.0% | |
| AAACAGAACAAGTGTGTACA+TGG | + | tig0019984:16343-16362 | Msa1377790:intron | 35.0% | |
| ! | TTTTACTGCCAACATAACAG+TGG | + | tig0019984:16493-16512 | Msa1377790:CDS | 35.0% |
| ! | TACTTTTAACAGTGTTCCAG+AGG | + | tig0019984:16723-16742 | Msa1377790:three_prime_UTR | 35.0% |
| ! | ACTTTTAACAGTGTTCCAGA+GGG | + | tig0019984:16724-16743 | Msa1377790:three_prime_UTR | 35.0% |
| GAAAGGATGAAACATGTTAC+AGG | - | tig0019984:16820-16839 | Msa1377790:intergenic | 35.0% | |
| !! | TAGTTTCATCTTTTGGTTGC+TGG | + | tig0019984:16859-16878 | Msa1377790:three_prime_UTR | 35.0% |
| !! | GCTTGTTATCTATGAGGATC+CGG | + | tig0019984:8357-8376 | Msa1377790:CDS | 40.0% |
| ATATGTGCATAGCATGTGCT+CGG | - | tig0019984:8404-8423 | Msa1377790:intergenic | 40.0% | |
| TTATTATTCGAACGCAACGC+AGG | + | tig0019984:8507-8526 | Msa1377790:intron | 40.0% | |
| ! | TGCGAAGGTTTGTCTCATTT+TGG | - | tig0019984:8881-8900 | Msa1377790:intergenic | 40.0% |
| ! | ACATCTTTAGAAGGGAAGCT+AGG | + | tig0019984:8942-8961 | Msa1377790:CDS | 40.0% |
| ! | TCTCTATGGTCTCTGAAAGA+TGG | - | tig0019984:8968-8987 | Msa1377790:intergenic | 40.0% |
| ATCTTTCAGAGACCATAGAG+AGG | + | tig0019984:8967-8986 | Msa1377790:CDS | 40.0% | |
| TCTTTCAGAGACCATAGAGA+GGG | + | tig0019984:8968-8987 | Msa1377790:CDS | 40.0% | |
| ! | TCTTTTCAGCTTCAGTCTTC+TGG | - | tig0019984:9360-9379 | Msa1377790:intergenic | 40.0% |
| ! | TTCTACAGGGAGTGATGTTT+TGG | + | tig0019984:9411-9430 | Msa1377790:CDS | 40.0% |
| ATATAAGATGAGGTTTGGGC+AGG | + | tig0019984:9672-9691 | Msa1377790:intron | 40.0% | |
| AAGCACACCCCTAAAAGAAA+AGG | - | tig0019984:9912-9931 | Msa1377790:intergenic | 40.0% | |
| ! | AAGAGAAGGGTACAAACAAG+GGG | - | tig0019984:9945-9964 | Msa1377790:intergenic | 40.0% |
| ! | CAAAGAGAAGGGTACAAACA+AGG | - | tig0019984:9947-9966 | Msa1377790:intergenic | 40.0% |
| CAAAACACCAGCAAAGAGAA+GGG | - | tig0019984:9958-9977 | Msa1377790:intergenic | 40.0% | |
| TCAAAACACCAGCAAAGAGA+AGG | - | tig0019984:9959-9978 | Msa1377790:intergenic | 40.0% | |
| GCTCCTTCACAACAATACTT+TGG | - | tig0019984:10023-10042 | Msa1377790:intergenic | 40.0% | |
| !!! | ATTGGGCTGGTCTTTTTACT+TGG | + | tig0019984:10052-10071 | Msa1377790:intron | 40.0% |
| TATCCATAGCCATGTTGTGA+TGG | + | tig0019984:10162-10181 | Msa1377790:intron | 40.0% | |
| AGTACAAACCAAAAAACCCG+AGG | + | tig0019984:10303-10322 | Msa1377790:intron | 40.0% | |
| !!! | TGGTATTTCCTCGGGTTTTT+TGG | - | tig0019984:10314-10333 | Msa1377790:intergenic | 40.0% |
| ! | AAATTAACTTGGACGGTGAG+GGG | - | tig0019984:10439-10458 | Msa1377790:intergenic | 40.0% |
| ! | CAAAATTAACTTGGACGGTG+AGG | - | tig0019984:10441-10460 | Msa1377790:intergenic | 40.0% |
| ! | CGAGAACATTGAGCTTTTGA+AGG | + | tig0019984:10662-10681 | Msa1377790:CDS | 40.0% |
| AATGCTATTACTCCAGACAG+TGG | - | tig0019984:10936-10955 | Msa1377790:intergenic | 40.0% | |
| AGTATAACTAGGAGACCAGT+AGG | - | tig0019984:11025-11044 | Msa1377790:intergenic | 40.0% | |
| TGTCAAGTCACATGGAACAT+TGG | - | tig0019984:11058-11077 | Msa1377790:intergenic | 40.0% | |
| GATGATAGCATGCACATGAA+TGG | - | tig0019984:11159-11178 | Msa1377790:intergenic | 40.0% | |
| !!! | TGGCTTTTTTGTGGGGTTTT+TGG | + | tig0019984:11263-11282 | Msa1377790:intron | 40.0% |
| !!! | GGCTTTTTTGTGGGGTTTTT+GGG | + | tig0019984:11264-11283 | Msa1377790:intron | 40.0% |
| ATATTGACAGCTGCCTTACA+TGG | + | tig0019984:11315-11334 | Msa1377790:intron | 40.0% | |
| ATGTGCTTACTGACCATGTA+AGG | - | tig0019984:11331-11350 | Msa1377790:intergenic | 40.0% | |
| AGTGTAGGACATGCATTTAG+AGG | + | tig0019984:11667-11686 | Msa1377790:intron | 40.0% | |
| ! | TGAGTCCTACTTTATTTGGG+GGG | - | tig0019984:11779-11798 | Msa1377790:intergenic | 40.0% |
| AAGTAGTGCTAATCCCATTC+AGG | + | tig0019984:12357-12376 | Msa1377790:CDS | 40.0% | |
| GAGGGAAATACAACCTGAAT+GGG | - | tig0019984:12373-12392 | Msa1377790:intergenic | 40.0% | |
| AGAGGGAAATACAACCTGAA+TGG | - | tig0019984:12374-12393 | Msa1377790:intergenic | 40.0% | |
| AACCACTCTCAGCTCATTTA+AGG | - | tig0019984:12530-12549 | Msa1377790:intergenic | 40.0% | |
| GGTTAATAATCGCCAACATG+AGG | + | tig0019984:12546-12565 | Msa1377790:CDS | 40.0% | |
| GAAGAATAAAGTCACTGGAG+AGG | + | tig0019984:12608-12627 | Msa1377790:CDS | 40.0% | |
| GCTACAAACAATGTAACCCT+AGG | - | tig0019984:13057-13076 | Msa1377790:intergenic | 40.0% | |
| TAGAGTTGTTGTCATGTGAC+TGG | + | tig0019984:13221-13240 | Msa1377790:intron | 40.0% | |
| ACAGCCTCTTGTGTAAAAAC+AGG | + | tig0019984:13269-13288 | Msa1377790:intron | 40.0% | |
| CAGCCTCTTGTGTAAAAACA+GGG | + | tig0019984:13270-13289 | Msa1377790:intron | 40.0% | |
| ACTGCGTACAATACACCAAA+TGG | + | tig0019984:13297-13316 | Msa1377790:intron | 40.0% | |
| CGTACAATACACCAAATGGT+GGG | + | tig0019984:13301-13320 | Msa1377790:intron | 40.0% | |
| TTCCTTCTACAGTTAGGTCA+TGG | + | tig0019984:13488-13507 | Msa1377790:intron | 40.0% | |
| CTGCCAATACAAAAGTTCTG+CGG | + | tig0019984:13522-13541 | Msa1377790:CDS | 40.0% | |
| ! | CATCCGCAGAACTTTTGTAT+TGG | - | tig0019984:13528-13547 | Msa1377790:intergenic | 40.0% |
| CAATACAAAAGTTCTGCGGA+TGG | + | tig0019984:13526-13545 | Msa1377790:CDS | 40.0% | |
| !! | CAGCACTTCTATGGTTTGTT+TGG | - | tig0019984:13579-13598 | Msa1377790:intergenic | 40.0% |
| ! | TGTTTTCATAGGAACCCTCT+TGG | - | tig0019984:13874-13893 | Msa1377790:intergenic | 40.0% |
| AACCAGTGATGTTAAGAGAG+AGG | - | tig0019984:13981-14000 | Msa1377790:intergenic | 40.0% | |
| AACCAGTGATGTTAAGACAG+AGG | - | tig0019984:14126-14145 | Msa1377790:intergenic | 40.0% | |
| CCTAAACAGTTCAAGTGATC+AGG | - | tig0019984:14256-14275 | Msa1377790:intergenic | 40.0% | |
| CCTGATCACTTGAACTGTTT+AGG | + | tig0019984:14253-14272 | Msa1377790:intron | 40.0% | |
| TTTAGGAGAAACTGGAAAGC+TGG | + | tig0019984:14270-14289 | Msa1377790:intron | 40.0% | |
| ! | ACAGAATTTCAGTTTTCCGG+AGG | + | tig0019984:14476-14495 | Msa1377790:CDS | 40.0% |
| ! | CAGAATTTCAGTTTTCCGGA+GGG | + | tig0019984:14477-14496 | Msa1377790:CDS | 40.0% |
| AAGCATGCTTCTGTTGTAAG+TGG | + | tig0019984:14743-14762 | Msa1377790:intron | 40.0% | |
| AACACAGGTCATCTTGAGTT+TGG | + | tig0019984:14773-14792 | Msa1377790:intron | 40.0% | |
| TCACACTTGGAATGCTTACA+TGG | + | tig0019984:14937-14956 | Msa1377790:intron | 40.0% | |
| CAGGAAAAACTTCCTTGTAG+CGG | + | tig0019984:15467-15486 | Msa1377790:intron | 40.0% | |
| TGTGTTTGGACGGATAGTAT+AGG | + | tig0019984:15992-16011 | Msa1377790:intron | 40.0% | |
| TTTGGACGGATAGTATAGGA+GGG | + | tig0019984:15996-16015 | Msa1377790:intron | 40.0% | |
| TATATTTGGGAGGAGGGTTT+AGG | - | tig0019984:16191-16210 | Msa1377790:intergenic | 40.0% | |
| GCAAACAAAGCTTAAGCCTA+AGG | - | tig0019984:16217-16236 | Msa1377790:intergenic | 40.0% | |
| ! | AGGGGAGGACTTTGAAAAAA+AGG | + | tig0019984:16255-16274 | Msa1377790:intron | 40.0% |
| TGAGCAAGTGGAAGAAATAG+AGG | + | tig0019984:16280-16299 | Msa1377790:intron | 40.0% | |
| GTTATGTTGGCAGTAAAAGC+AGG | - | tig0019984:16491-16510 | Msa1377790:intergenic | 40.0% | |
| GAAAGACTCCACTGTTATGT+TGG | - | tig0019984:16504-16523 | Msa1377790:intergenic | 40.0% | |
| ATGCTGCATAGATATCTTCC+AGG | + | tig0019984:16610-16629 | Msa1377790:three_prime_UTR | 40.0% | |
| !! | TTTTCAAGCCCACAACTATC+AGG | - | tig0019984:16691-16710 | Msa1377790:intergenic | 40.0% |
| !! | TCATCTTTTGGTTGCTGGTT+AGG | + | tig0019984:16864-16883 | Msa1377790:three_prime_UTR | 40.0% |
| TGAAATCCCCAAAACCCCAA+AGG | - | tig0019984:8219-8238 | Msa1377790:intergenic | 45.0% | |
| !! | CGCACAGCTTGTTATCTATG+AGG | + | tig0019984:8351-8370 | Msa1377790:CDS | 45.0% |
| TGTTATCTATGAGGATCCGG+CGG | + | tig0019984:8360-8379 | Msa1377790:CDS | 45.0% | |
| CACATATCAGTGTCGCCAAA+TGG | + | tig0019984:8417-8436 | Msa1377790:CDS | 45.0% | |
| TATCAGTGTCGCCAAATGGT+TGG | + | tig0019984:8421-8440 | Msa1377790:intron | 45.0% | |
| ATGACATGACAGACACTGAG+AGG | + | tig0019984:8697-8716 | Msa1377790:intron | 45.0% | |
| CACTGAGAGGAAGAAATCTG+TGG | + | tig0019984:8710-8729 | Msa1377790:CDS | 45.0% | |
| CAAGAACTCGCTGCTTCTAA+AGG | + | tig0019984:8753-8772 | Msa1377790:CDS | 45.0% | |
| ! | TGCTTCTAAAGGCCGTGAAA+AGG | + | tig0019984:8764-8783 | Msa1377790:CDS | 45.0% |
| ACTCCAGGATCAACTCTTGA+AGG | + | tig0019984:8788-8807 | Msa1377790:CDS | 45.0% | |
| !! | AGATGTTGCTTTGTCTTGGG+CGG | - | tig0019984:8928-8947 | Msa1377790:intergenic | 45.0% |
| AGACCTGCTTAAAGAGCAAC+TGG | + | tig0019984:9190-9209 | Msa1377790:CDS | 45.0% | |
| AGAGCAACTGGACCATCTTA+AGG | + | tig0019984:9202-9221 | Msa1377790:CDS | 45.0% | |
| CTGGTGCAAACACTGGAAAT+AGG | - | tig0019984:9341-9360 | Msa1377790:intergenic | 45.0% | |
| !!! | GCTAGCAACTTTTTCATCCC+AGG | + | tig0019984:9381-9400 | Msa1377790:CDS | 45.0% |
| TCCCAGGAAGTTTCTTCTAC+AGG | + | tig0019984:9397-9416 | Msa1377790:CDS | 45.0% | |
| CCCTGTAGAAGAAACTTCCT+GGG | - | tig0019984:9401-9420 | Msa1377790:intergenic | 45.0% | |
| CCCAGGAAGTTTCTTCTACA+GGG | + | tig0019984:9398-9417 | Msa1377790:CDS | 45.0% | |
| TCCCTGTAGAAGAAACTTCC+TGG | - | tig0019984:9402-9421 | Msa1377790:intergenic | 45.0% | |
| GTTTGTACCCTTCTCTTTGC+TGG | + | tig0019984:9948-9967 | Msa1377790:intron | 45.0% | |
| GAGCTTGATATCAATTGGGC+TGG | + | tig0019984:10039-10058 | Msa1377790:intron | 45.0% | |
| ACACCATCACAACATGGCTA+TGG | - | tig0019984:10168-10187 | Msa1377790:intergenic | 45.0% | |
| ! | AGCCATGTTGTGATGGTGTT+CGG | + | tig0019984:10169-10188 | Msa1377790:intron | 45.0% |
| TACCGAACACCATCACAACA+TGG | - | tig0019984:10174-10193 | Msa1377790:intergenic | 45.0% | |
| !! | GCTTTTGAAGGAGAAACTGC+TGG | + | tig0019984:10674-10693 | Msa1377790:CDS | 45.0% |
| TTTGAAGGAGAAACTGCTGG+AGG | + | tig0019984:10677-10696 | Msa1377790:CDS | 45.0% | |
| !! | TTCTGGAATGTGTATGGCCT+AGG | + | tig0019984:11223-11242 | Msa1377790:intron | 45.0% |
| AACTGCTCGCTTGAAACAAC+TGG | + | tig0019984:11420-11439 | Msa1377790:CDS | 45.0% | |
| TGCTGAAACTGAAGCTGTGT+TGG | + | tig0019984:11480-11499 | Msa1377790:CDS | 45.0% | |
| CTGGATATCCAAGCTAGTGT+AGG | + | tig0019984:11652-11671 | Msa1377790:intron | 45.0% | |
| ATGCATGTCCTACACTAGCT+TGG | - | tig0019984:11663-11682 | Msa1377790:intergenic | 45.0% | |
| TAGGAAGGAGTTTGACAGCT+GGG | + | tig0019984:11823-11842 | Msa1377790:intron | 45.0% | |
| GGGATTTAGATGCTAGATGG+AGG | + | tig0019984:11868-11887 | Msa1377790:intron | 45.0% | |
| TAGATGCTAGATGGAGGAGA+TGG | + | tig0019984:11874-11893 | Msa1377790:intron | 45.0% | |
| GTGTGATGCAAGTCCATTCT+AGG | - | tig0019984:11913-11932 | Msa1377790:intergenic | 45.0% | |
| ACTTGCATCACACCATTCCA+AGG | + | tig0019984:11920-11939 | Msa1377790:intron | 45.0% | |
| GCTGCATGCTGTGATAATAG+TGG | + | tig0019984:12167-12186 | Msa1377790:intron | 45.0% | |
| CACCTTAAATGAGCTGAGAG+TGG | + | tig0019984:12525-12544 | Msa1377790:CDS | 45.0% | |
| ATGATATCTCTGAACGGAGC+CGG | - | tig0019984:12642-12661 | Msa1377790:intergenic | 45.0% | |
| !! | GGATCAAGGAAAAGCATCTG+AGG | - | tig0019984:12956-12975 | Msa1377790:intergenic | 45.0% |
| GTCTATATGAGGGGTAACCT+TGG | + | tig0019984:13189-13208 | Msa1377790:intron | 45.0% | |
| GTTGTTGTCATGTGACTGGA+AGG | + | tig0019984:13225-13244 | Msa1377790:intron | 45.0% | |
| ! | TTACACAAGAGGCTGTTTCC+AGG | - | tig0019984:13265-13284 | Msa1377790:intergenic | 45.0% |
| GCGTACAATACACCAAATGG+TGG | + | tig0019984:13300-13319 | Msa1377790:intron | 45.0% | |
| AAAAAAGGCAAAGGGCAACC+CGG | - | tig0019984:13367-13386 | Msa1377790:intergenic | 45.0% | |
| AACCAGAAACTGGACAGCTT+GGG | - | tig0019984:13435-13454 | Msa1377790:intergenic | 45.0% | |
| AAACCAGAAACTGGACAGCT+TGG | - | tig0019984:13436-13455 | Msa1377790:intergenic | 45.0% | |
| ! | TATACAGGAGGTATGCCAAG+AGG | + | tig0019984:13856-13875 | Msa1377790:intron | 45.0% |
| ! | ATACAGGAGGTATGCCAAGA+GGG | + | tig0019984:13857-13876 | Msa1377790:intron | 45.0% |
| GACCTCTCTCTTAACATCAC+TGG | + | tig0019984:13976-13995 | Msa1377790:intron | 45.0% | |
| GACCTCTGTCTTAACATCAC+TGG | + | tig0019984:14121-14140 | Msa1377790:intron | 45.0% | |
| TTGTATGTGTTAAGGCCTCG+AGG | + | tig0019984:14167-14186 | Msa1377790:intron | 45.0% | |
| CAGTTCAAGTGATCAGGCAA+CGG | - | tig0019984:14250-14269 | Msa1377790:intergenic | 45.0% | |
| GATGAACACCAGCGATCAAA+TGG | + | tig0019984:14992-15011 | Msa1377790:CDS | 45.0% | |
| ATTATCTGCAAGCCTGCAAG+CGG | - | tig0019984:15185-15204 | Msa1377790:intergenic | 45.0% | |
| TTGCAGGCTTGCAGATAATC+AGG | + | tig0019984:15186-15205 | Msa1377790:intron | 45.0% | |
| TCATTACACATCTCAGCCTG+AGG | + | tig0019984:15297-15316 | Msa1377790:CDS | 45.0% | |
| !! | ACCTTTAGGGTGTGTTTGGA+CGG | + | tig0019984:15982-16001 | Msa1377790:intron | 45.0% |
| GTTTGGACGGATAGTATAGG+AGG | + | tig0019984:15995-16014 | Msa1377790:intron | 45.0% | |
| TTGGACGGATAGTATAGGAG+GGG | + | tig0019984:15997-16016 | Msa1377790:intron | 45.0% | |
| AGGGTCTATATTTGGGAGGA+GGG | - | tig0019984:16197-16216 | Msa1377790:intergenic | 45.0% | |
| AAGGGTCTATATTTGGGAGG+AGG | - | tig0019984:16198-16217 | Msa1377790:intergenic | 45.0% | |
| CCTAAGGGTCTATATTTGGG+AGG | - | tig0019984:16201-16220 | Msa1377790:intergenic | 45.0% | |
| CCTCCCAAATATAGACCCTT+AGG | + | tig0019984:16198-16217 | Msa1377790:intron | 45.0% | |
| !! | AGCTTTGTTTGCGAGTCTGA+AGG | + | tig0019984:16225-16244 | Msa1377790:intron | 45.0% |
| TTTGCGAGTCTGAAGGTGAA+GGG | + | tig0019984:16232-16251 | Msa1377790:intron | 45.0% | |
| ATAGAGGAAAATGGAAGGGG+AGG | + | tig0019984:16296-16315 | Msa1377790:intron | 45.0% | |
| TAGAGGAAAATGGAAGGGGA+GGG | + | tig0019984:16297-16316 | Msa1377790:intron | 45.0% | |
| ACTTGTGATTGTGCATTCCC+AGG | + | tig0019984:16433-16452 | Msa1377790:intron | 45.0% | |
| CCGAACGAATATCTCAACCT+GGG | - | tig0019984:16453-16472 | Msa1377790:intergenic | 45.0% | |
| ! | CCCAGGTTGAGATATTCGTT+CGG | + | tig0019984:16450-16469 | Msa1377790:intron | 45.0% |
| TCCGAACGAATATCTCAACC+TGG | - | tig0019984:16454-16473 | Msa1377790:intergenic | 45.0% | |
| TAGCTGACTAACTAGTTGCC+TGG | - | tig0019984:16631-16650 | Msa1377790:intergenic | 45.0% | |
| ! | CTTTTGCAGCATTCTCGCAT+CGG | + | tig0019984:16663-16682 | Msa1377790:three_prime_UTR | 45.0% |
| TTTAACAGTGTTCCAGAGGG+TGG | + | tig0019984:16727-16746 | Msa1377790:three_prime_UTR | 45.0% | |
| AAGTTCAAAACTCCACCCTC+TGG | - | tig0019984:16742-16761 | Msa1377790:intergenic | 45.0% | |
| !! | TTTATATTATATTATGTTTA+AGG | + | tig0019984:15126-15145 | Msa1377790:intron | 5.0% |
| !! | TTATATTATATTATGTTTAA+GGG | + | tig0019984:15127-15146 | Msa1377790:intron | 5.0% |
| !!! | TTAATATTTTGTATTAATTA+TGG | + | tig0019984:15667-15686 | Msa1377790:intron | 5.0% |
| !! | AAAAAAAAAAAAATTAGTAA+TGG | - | tig0019984:15877-15896 | Msa1377790:intergenic | 5.0% |
| !!! | ACTTTTTTATTTTTAAATTA+AGG | + | tig0019984:16027-16046 | Msa1377790:intron | 5.0% |
| !!! | AAGTTGCGCCTTTGGGGTTT+TGG | + | tig0019984:8208-8227 | Msa1377790:five_prime_UTR | 50.0% |
| !!! | AGTTGCGCCTTTGGGGTTTT+GGG | + | tig0019984:8209-8228 | Msa1377790:five_prime_UTR | 50.0% |
| !! | GATCCTGGAGTGCCTTTTCA+CGG | - | tig0019984:8779-8798 | Msa1377790:intergenic | 50.0% |
| ! | CCTCCTTCAAGAGTTGATCC+TGG | - | tig0019984:8794-8813 | Msa1377790:intergenic | 50.0% |
| CCAGGATCAACTCTTGAAGG+AGG | + | tig0019984:8791-8810 | Msa1377790:CDS | 50.0% | |
| AAGCAGGTCTGCTTCTCTCT+CGG | - | tig0019984:9180-9199 | Msa1377790:intergenic | 50.0% | |
| GGTCCAGTTGCTCTTTAAGC+AGG | - | tig0019984:9196-9215 | Msa1377790:intergenic | 50.0% | |
| CAGTCTTCTGGTGCAAACAC+TGG | - | tig0019984:9348-9367 | Msa1377790:intergenic | 50.0% | |
| ! | TGATCGCGCTGGTATTTCCT+CGG | - | tig0019984:10323-10342 | Msa1377790:intergenic | 50.0% |
| ACCTGGCATCTCATGTTTCG+AGG | + | tig0019984:10815-10834 | Msa1377790:CDS | 50.0% | |
| TCCTCGAAACATGAGATGCC+AGG | - | tig0019984:10819-10838 | Msa1377790:intergenic | 50.0% | |
| AGTACACAGAAGGAGGGTGA+AGG | + | tig0019984:11397-11416 | Msa1377790:CDS | 50.0% | |
| TGCTCGCTTGAAACAACTGG+AGG | + | tig0019984:11423-11442 | Msa1377790:CDS | 50.0% | |
| TCGCTTGAAACAACTGGAGG+TGG | + | tig0019984:11426-11445 | Msa1377790:CDS | 50.0% | |
| GAAACAACTGGAGGTGGCTT+TGG | + | tig0019984:11432-11451 | Msa1377790:CDS | 50.0% | |
| ! | GCTTTGGATGCTGCTGAGAT+TGG | + | tig0019984:11448-11467 | Msa1377790:CDS | 50.0% |
| TGGAGCCCCCCAAATAAAGT+AGG | + | tig0019984:11771-11790 | Msa1377790:intron | 50.0% | |
| GTAGGAAGGAGTTTGACAGC+TGG | + | tig0019984:11822-11841 | Msa1377790:intron | 50.0% | |
| AGGAAGGAGTTTGACAGCTG+GGG | + | tig0019984:11824-11843 | Msa1377790:intron | 50.0% | |
| !! | TTAGAGGCAAAGGTTGGTGC+TGG | + | tig0019984:12664-12683 | Msa1377790:intron | 50.0% |
| !! | TAGAGGCAAAGGTTGGTGCT+GGG | + | tig0019984:12665-12684 | Msa1377790:intron | 50.0% |
| GTCATGTGACTGGAAGGTCA+CGG | + | tig0019984:13231-13250 | Msa1377790:intron | 50.0% | |
| TCATGTGACTGGAAGGTCAC+GGG | + | tig0019984:13232-13251 | Msa1377790:intron | 50.0% | |
| CGCCATGACCTAACTGTAGA+AGG | - | tig0019984:13493-13512 | Msa1377790:intergenic | 50.0% | |
| ATGTGTTAAGGCCTCGAGGA+CGG | + | tig0019984:14171-14190 | Msa1377790:intron | 50.0% | |
| TATTCAGCTTTCCGTCCTCG+AGG | - | tig0019984:14185-14204 | Msa1377790:intergenic | 50.0% | |
| AGGAGAAACTGGAAAGCTGG+TGG | + | tig0019984:14273-14292 | Msa1377790:intron | 50.0% | |
| GCTGGTGGAGAGCTACATAT+CGG | + | tig0019984:14288-14307 | Msa1377790:CDS | 50.0% | |
| CACTAGAGAAGCGAGAAGAG+AGG | + | tig0019984:14344-14363 | Msa1377790:CDS | 50.0% | |
| ! | AGGGCGTGCTGTGAGATTTT+TGG | + | tig0019984:14496-14515 | Msa1377790:CDS | 50.0% |
| CTGGGATTCCATTTGATCGC+TGG | - | tig0019984:15003-15022 | Msa1377790:intergenic | 50.0% | |
| ! | GCAGCGTAAATCGTGTCACT+GGG | - | tig0019984:15021-15040 | Msa1377790:intergenic | 50.0% |
| TGCAGCGTAAATCGTGTCAC+TGG | - | tig0019984:15022-15041 | Msa1377790:intergenic | 50.0% | |
| TTATCTGCAAGCCTGCAAGC+GGG | - | tig0019984:15184-15203 | Msa1377790:intergenic | 50.0% | |
| CTTACCTGACGAGATACCTC+AGG | - | tig0019984:15316-15335 | Msa1377790:intergenic | 50.0% | |
| ! | CTGAGGTATCTCGTCAGGTA+AGG | + | tig0019984:15314-15333 | Msa1377790:intron | 50.0% |
| ! | TTTTGTGCGCATGAGAGCGA+AGG | + | tig0019984:15433-15452 | Msa1377790:intron | 50.0% |
| TTTGTGCGCATGAGAGCGAA+GGG | + | tig0019984:15434-15453 | Msa1377790:intron | 50.0% | |
| TCCGTCCAAACACACCCTAA+AGG | - | tig0019984:15986-16005 | Msa1377790:intergenic | 50.0% | |
| GTTTGCGAGTCTGAAGGTGA+AGG | + | tig0019984:16231-16250 | Msa1377790:intron | 50.0% | |
| AAAATGGAAGGGGAGGGCTT+TGG | + | tig0019984:16303-16322 | Msa1377790:intron | 50.0% | |
| AAATGGAAGGGGAGGGCTTT+GGG | + | tig0019984:16304-16323 | Msa1377790:intron | 50.0% | |
| ! | CATCGGTGCCTGATAGTTGT+GGG | + | tig0019984:16680-16699 | Msa1377790:three_prime_UTR | 50.0% |
| !!! | GTTGCGCCTTTGGGGTTTTG+GGG | + | tig0019984:8210-8229 | Msa1377790:five_prime_UTR | 55.0% |
| TCATCGGAACGTGGCCTCTT+CGG | - | tig0019984:8313-8332 | Msa1377790:intergenic | 55.0% | |
| AAGAGGCCACGTTCCGATGA+CGG | + | tig0019984:8313-8332 | Msa1377790:CDS | 55.0% | |
| GTGCATAGCATGTGCTCGGA+GGG | - | tig0019984:8400-8419 | Msa1377790:intergenic | 55.0% | |
| TGTGCATAGCATGTGCTCGG+AGG | - | tig0019984:8401-8420 | Msa1377790:intergenic | 55.0% | |
| ! | GAGACTCGGCTTGTATGCGA+AGG | - | tig0019984:8896-8915 | Msa1377790:intergenic | 55.0% |
| TGCTTTGTCTTGGGCGGAAG+CGG | - | tig0019984:8922-8941 | Msa1377790:intergenic | 55.0% | |
| AGATGAGGTTTGGGCAGGCT+TGG | + | tig0019984:9677-9696 | Msa1377790:intron | 55.0% | |
| ! | GATCGCGCTGGTATTTCCTC+GGG | - | tig0019984:10322-10341 | Msa1377790:intergenic | 55.0% |
| GAACAGAAGCTTGATCGCGC+TGG | - | tig0019984:10334-10353 | Msa1377790:intergenic | 55.0% | |
| GCTCAGATTGTGCCCTTTCC+CGG | - | tig0019984:10713-10732 | Msa1377790:intergenic | 55.0% | |
| GAGCTGTTGAAGCCACTGTC+TGG | + | tig0019984:10921-10940 | Msa1377790:intron | 55.0% | |
| GCAGCTAGCAGTTGTCACAG+AGG | + | tig0019984:12276-12295 | Msa1377790:intron | 55.0% | |
| CAACTCTACCAGTTGCGCCA+AGG | - | tig0019984:13209-13228 | Msa1377790:intergenic | 55.0% | |
| CTAAAGCTCCCGCATACGCA+GGG | - | tig0019984:13340-13359 | Msa1377790:intergenic | 55.0% | |
| ACTAAAGCTCCCGCATACGC+AGG | - | tig0019984:13341-13360 | Msa1377790:intergenic | 55.0% | |
| ! | ATGCGGGAGCTTTAGTGCAC+CGG | + | tig0019984:13345-13364 | Msa1377790:intron | 55.0% |
| CACCCAAGCTGTCCAGTTTC+TGG | + | tig0019984:13430-13449 | Msa1377790:intron | 55.0% | |
| AAATCTCACAGCACGCCCTC+CGG | - | tig0019984:14495-14514 | Msa1377790:intergenic | 55.0% | |
| ! | TCAGCCTGAGGTATCTCGTC+AGG | + | tig0019984:15309-15328 | Msa1377790:CDS | 55.0% |
| TTGTGCGCATGAGAGCGAAG+GGG | + | tig0019984:15435-15454 | Msa1377790:intron | 55.0% | |
| GACGGATAGTATAGGAGGGG+AGG | + | tig0019984:16000-16019 | Msa1377790:intron | 55.0% | |
| CGAGTCTGAAGGTGAAGGGA+GGG | + | tig0019984:16236-16255 | Msa1377790:intron | 55.0% | |
| GAGTCTGAAGGTGAAGGGAG+GGG | + | tig0019984:16237-16256 | Msa1377790:intron | 55.0% | |
| AATGGAAGGGGAGGGCTTTG+GGG | + | tig0019984:16305-16324 | Msa1377790:intron | 55.0% | |
| ! | GCATCGGTGCCTGATAGTTG+TGG | + | tig0019984:16679-16698 | Msa1377790:three_prime_UTR | 55.0% |
| !! | TCTTCGGTGGCGGAGGAGTA+CGG | - | tig0019984:8297-8316 | Msa1377790:intergenic | 60.0% |
| !! | AGGCCGTGAAAAGGCACTCC+AGG | + | tig0019984:8773-8792 | Msa1377790:CDS | 60.0% |
| !! | GGGGGAGGGGTGTCAATACA+TGG | + | tig0019984:10494-10513 | Msa1377790:intron | 60.0% |
| TGCTGGAGGAAAAGAGCCGC+CGG | + | tig0019984:10691-10710 | Msa1377790:CDS | 60.0% | |
| AGGAAAAGAGCCGCCGGGAA+AGG | + | tig0019984:10697-10716 | Msa1377790:CDS | 60.0% | |
| GGAAAAGAGCCGCCGGGAAA+GGG | + | tig0019984:10698-10717 | Msa1377790:CDS | 60.0% | |
| CAGATTGTGCCCTTTCCCGG+CGG | - | tig0019984:10710-10729 | Msa1377790:intergenic | 60.0% | |
| CACTGGAGAGGGAGAGTGAC+CGG | + | tig0019984:12620-12639 | Msa1377790:CDS | 60.0% | |
| AGGGGTAACCTTGGCGCAAC+TGG | + | tig0019984:13198-13217 | Msa1377790:intron | 60.0% | |
| AAGGTCACGGGTTCGAGTCC+TGG | + | tig0019984:13244-13263 | Msa1377790:intron | 60.0% | |
| ! | CAAATGGTGGGACCCCTTCC+CGG | + | tig0019984:13313-13332 | Msa1377790:intron | 60.0% |
| ! | TGCGGGAGCTTTAGTGCACC+GGG | + | tig0019984:13346-13365 | Msa1377790:intron | 60.0% |
| AGGGACTAACACCCGCTTGC+AGG | + | tig0019984:15170-15189 | Msa1377790:intron | 60.0% | |
| TGTGCGCATGAGAGCGAAGG+GGG | + | tig0019984:15436-15455 | Msa1377790:intron | 60.0% | |
| GCGAGTCTGAAGGTGAAGGG+AGG | + | tig0019984:16235-16254 | Msa1377790:intron | 60.0% | |
| TCTGAAGGTGAAGGGAGGGG+AGG | + | tig0019984:16240-16259 | Msa1377790:intron | 60.0% | |
| ! | ATGGAAGGGGAGGGCTTTGG+GGG | + | tig0019984:16306-16325 | Msa1377790:intron | 60.0% |
| GTACTCCTCCGCCACCGAAG+AGG | + | tig0019984:8296-8315 | Msa1377790:CDS | 65.0% | |
| GAACGTGGCCTCTTCGGTGG+CGG | - | tig0019984:8307-8326 | Msa1377790:intergenic | 65.0% | |
| TCGGAACGTGGCCTCTTCGG+TGG | - | tig0019984:8310-8329 | Msa1377790:intergenic | 65.0% | |
| ! | CCACGTTCCGATGACGGCGA+CGG | + | tig0019984:8319-8338 | Msa1377790:CDS | 65.0% |
| CTATGAGGATCCGGCGGCAG+CGG | + | tig0019984:8366-8385 | Msa1377790:CDS | 65.0% | |
| GGCGGAAGCGGCATGAGACT+CGG | - | tig0019984:8910-8929 | Msa1377790:intergenic | 65.0% | |
| GCTGGAGGAAAAGAGCCGCC+GGG | + | tig0019984:10692-10711 | Msa1377790:CDS | 65.0% | |
| CGGGAAGGGGTCCCACCATT+TGG | - | tig0019984:13315-13334 | Msa1377790:intergenic | 65.0% | |
| CATACGCAGGGTCCGGGAAG+GGG | - | tig0019984:13328-13347 | Msa1377790:intergenic | 65.0% | |
| GCATACGCAGGGTCCGGGAA+GGG | - | tig0019984:13329-13348 | Msa1377790:intergenic | 65.0% | |
| CTTCCCGGACCCTGCGTATG+CGG | + | tig0019984:13328-13347 | Msa1377790:intron | 65.0% | |
| TTCCCGGACCCTGCGTATGC+GGG | + | tig0019984:13329-13348 | Msa1377790:intron | 65.0% | |
| GTGCGCATGAGAGCGAAGGG+GGG | + | tig0019984:15437-15456 | Msa1377790:intron | 65.0% | |
| AGCGAAGGGGGGAGCTTAGC+AGG | + | tig0019984:15448-15467 | Msa1377790:intron | 65.0% | |
| CCGTCGCCGTCATCGGAACG+TGG | - | tig0019984:8322-8341 | Msa1377790:intergenic | 70.0% | |
| ! | TCCGATGACGGCGACGGCGA+CGG | + | tig0019984:8325-8344 | Msa1377790:CDS | 70.0% |
| CGCATACGCAGGGTCCGGGA+AGG | - | tig0019984:13330-13349 | Msa1377790:intergenic | 70.0% | |
| CTCCCGCATACGCAGGGTCC+GGG | - | tig0019984:13334-13353 | Msa1377790:intergenic | 70.0% | |
| GCTCCCGCATACGCAGGGTC+CGG | - | tig0019984:13335-13354 | Msa1377790:intergenic | 70.0% | |
| ! | CGTGGCCTCTTCGGTGGCGG+AGG | - | tig0019984:8304-8323 | Msa1377790:intergenic | 75.0% |
| GCCGTCGCCGTCGCCGTCAT+CGG | - | tig0019984:8329-8348 | Msa1377790:intergenic | 75.0% | |
| TGAGGATCCGGCGGCAGCGG+TGG | + | tig0019984:8369-8388 | Msa1377790:CDS | 75.0% | |
| GGTTCCTCCACCGCTGCCGC+CGG | - | tig0019984:8379-8398 | Msa1377790:intergenic | 75.0% | |
| ! | GGATCCGGCGGCAGCGGTGG+AGG | + | tig0019984:8372-8391 | Msa1377790:CDS | 80.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| tig0019984 | gene | 8206 | 16964 | 8206 | ID=Msa1377790;Name=Msa1377790 |
| tig0019984 | mRNA | 8206 | 16964 | 8206 | ID=Msa1377790-mRNA-1;Parent=Msa1377790;Name=Msa1377790-mRNA-1;_AED=0.08;_eAED=0.08;_QI=80|1|1|1|1|1|15|420|708 |
| tig0019984 | exon | 8206 | 8438 | 8206 | ID=Msa1377790-mRNA-1:exon:5793;Parent=Msa1377790-mRNA-1 |
| tig0019984 | exon | 8529 | 8628 | 8529 | ID=Msa1377790-mRNA-1:exon:5794;Parent=Msa1377790-mRNA-1 |
| tig0019984 | exon | 8709 | 9067 | 8709 | ID=Msa1377790-mRNA-1:exon:5795;Parent=Msa1377790-mRNA-1 |
| tig0019984 | exon | 9146 | 9238 | 9146 | ID=Msa1377790-mRNA-1:exon:5796;Parent=Msa1377790-mRNA-1 |
| tig0019984 | exon | 9349 | 9465 | 9349 | ID=Msa1377790-mRNA-1:exon:5797;Parent=Msa1377790-mRNA-1 |
| tig0019984 | exon | 10621 | 10868 | 10621 | ID=Msa1377790-mRNA-1:exon:5798;Parent=Msa1377790-mRNA-1 |
| tig0019984 | exon | 11384 | 11555 | 11384 | ID=Msa1377790-mRNA-1:exon:5799;Parent=Msa1377790-mRNA-1 |
| tig0019984 | exon | 12280 | 12378 | 12280 | ID=Msa1377790-mRNA-1:exon:5800;Parent=Msa1377790-mRNA-1 |
| tig0019984 | exon | 12472 | 12675 | 12472 | ID=Msa1377790-mRNA-1:exon:5801;Parent=Msa1377790-mRNA-1 |
| tig0019984 | exon | 13500 | 13662 | 13500 | ID=Msa1377790-mRNA-1:exon:5802;Parent=Msa1377790-mRNA-1 |
| tig0019984 | exon | 14275 | 14365 | 14275 | ID=Msa1377790-mRNA-1:exon:5803;Parent=Msa1377790-mRNA-1 |
| tig0019984 | exon | 14456 | 14525 | 14456 | ID=Msa1377790-mRNA-1:exon:5804;Parent=Msa1377790-mRNA-1 |
| tig0019984 | exon | 14983 | 15111 | 14983 | ID=Msa1377790-mRNA-1:exon:5805;Parent=Msa1377790-mRNA-1 |
| tig0019984 | exon | 15292 | 15330 | 15292 | ID=Msa1377790-mRNA-1:exon:5806;Parent=Msa1377790-mRNA-1 |
| tig0019984 | exon | 16455 | 16964 | 16455 | ID=Msa1377790-mRNA-1:exon:5807;Parent=Msa1377790-mRNA-1 |
| tig0019984 | five_prime_UTR | 8206 | 8285 | 8206 | ID=Msa1377790-mRNA-1:five_prime_utr;Parent=Msa1377790-mRNA-1 |
| tig0019984 | CDS | 8286 | 8438 | 8286 | ID=Msa1377790-mRNA-1:cds;Parent=Msa1377790-mRNA-1 |
| tig0019984 | CDS | 8529 | 8628 | 8529 | ID=Msa1377790-mRNA-1:cds;Parent=Msa1377790-mRNA-1 |
| tig0019984 | CDS | 8709 | 9067 | 8709 | ID=Msa1377790-mRNA-1:cds;Parent=Msa1377790-mRNA-1 |
| tig0019984 | CDS | 9146 | 9238 | 9146 | ID=Msa1377790-mRNA-1:cds;Parent=Msa1377790-mRNA-1 |
| tig0019984 | CDS | 9349 | 9465 | 9349 | ID=Msa1377790-mRNA-1:cds;Parent=Msa1377790-mRNA-1 |
| tig0019984 | CDS | 10621 | 10868 | 10621 | ID=Msa1377790-mRNA-1:cds;Parent=Msa1377790-mRNA-1 |
| tig0019984 | CDS | 11384 | 11555 | 11384 | ID=Msa1377790-mRNA-1:cds;Parent=Msa1377790-mRNA-1 |
| tig0019984 | CDS | 12280 | 12378 | 12280 | ID=Msa1377790-mRNA-1:cds;Parent=Msa1377790-mRNA-1 |
| tig0019984 | CDS | 12472 | 12675 | 12472 | ID=Msa1377790-mRNA-1:cds;Parent=Msa1377790-mRNA-1 |
| tig0019984 | CDS | 13500 | 13662 | 13500 | ID=Msa1377790-mRNA-1:cds;Parent=Msa1377790-mRNA-1 |
| tig0019984 | CDS | 14275 | 14365 | 14275 | ID=Msa1377790-mRNA-1:cds;Parent=Msa1377790-mRNA-1 |
| tig0019984 | CDS | 14456 | 14525 | 14456 | ID=Msa1377790-mRNA-1:cds;Parent=Msa1377790-mRNA-1 |
| tig0019984 | CDS | 14983 | 15111 | 14983 | ID=Msa1377790-mRNA-1:cds;Parent=Msa1377790-mRNA-1 |
| tig0019984 | CDS | 15292 | 15330 | 15292 | ID=Msa1377790-mRNA-1:cds;Parent=Msa1377790-mRNA-1 |
| tig0019984 | CDS | 16455 | 16544 | 16455 | ID=Msa1377790-mRNA-1:cds;Parent=Msa1377790-mRNA-1 |
| tig0019984 | three_prime_UTR | 16545 | 16964 | 16545 | ID=Msa1377790-mRNA-1:three_prime_utr;Parent=Msa1377790-mRNA-1 |
| Gene Sequence |
| Protein sequence |
