AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa1411420

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa1411420 MtrunA17_Chr1g0201031 98.824 255 3 0 1 255 1 255 0.0 525
Msa1411420 MtrunA17_Chr5g0416951 66.800 250 80 2 8 254 9 258 8.33e-129 365
Msa1411420 MtrunA17_Chr1g0201041 95.455 132 6 0 75 206 1 132 9.88e-84 246
Msa1411420 MtrunA17_Chr8g0364601 33.333 177 100 8 89 255 103 271 1.10e-15 74.7
Msa1411420 MtrunA17_Chr5g0414141 34.783 161 90 7 89 242 103 255 4.98e-15 72.8
Msa1411420 MtrunA17_Chr6g0466381 28.500 200 122 8 35 224 50 238 1.77e-13 68.2
Msa1411420 MtrunA17_Chr6g0465561 34.266 143 80 6 89 224 103 238 4.39e-13 67.0
Msa1411420 MtrunA17_Chr4g0056801 30.189 159 102 4 89 243 121 274 9.56e-11 60.8
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa1411420 AT1G14290.1 67.871 249 78 2 8 254 6 254 1.75e-128 364
Msa1411420 AT1G69640.1 67.600 250 79 2 8 255 7 256 2.06e-119 342
Msa1411420 AT1G14290.2 70.000 180 53 1 76 254 1 180 8.78e-96 279
Msa1411420 AT2G29390.6 32.919 161 93 7 89 242 20 172 4.21e-13 66.2
Msa1411420 AT2G29390.4 32.919 161 93 7 89 242 20 172 4.21e-13 66.2
Msa1411420 AT2G29390.5 32.919 161 93 7 89 242 62 214 1.18e-12 65.9
Msa1411420 AT2G29390.2 32.919 161 93 7 89 242 103 255 1.59e-12 65.9
Msa1411420 AT2G29390.3 32.919 161 93 7 89 242 96 248 2.08e-12 65.5
Msa1411420 AT2G29390.1 31.579 171 94 7 89 242 103 267 4.91e-12 64.7
Msa1411420 AT1G07420.2 31.447 159 98 6 89 242 65 217 6.90e-12 63.9
Msa1411420 AT1G07420.1 31.447 159 98 6 89 242 103 255 7.92e-12 63.9

Find 97 sgRNAs with CRISPR-Local

Find 290 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
GCCATCTCGTTTCTTGTTTC+AGG 0.088504 tig0023765:+41183 Msa1411420:CDS
AAATTGAATTATTGGGTAAT+TGG 0.113537 tig0023765:-37977 None:intergenic
ACCTTTCACAACTGCTTTAA+AGG 0.133433 tig0023765:-38745 None:intergenic
TTATATCAAAATTGAATTAT+TGG 0.182968 tig0023765:-37985 None:intergenic
CTTTCTCCCTCAAACGTGTT+TGG 0.222136 tig0023765:-37909 None:intergenic
CCCATATGGGATAAAATTCT+TGG 0.251647 tig0023765:+41387 Msa1411420:CDS
TTGCTCCTATTGTGGTTTAT+TGG 0.252719 tig0023765:+38634 Msa1411420:CDS
CGGGAGTGTGTAATAGTTTA+GGG 0.264391 tig0023765:+37944 Msa1411420:five_prime_UTR
CATGATACGCAGTGTTATTC+TGG 0.264396 tig0023765:-41311 None:intergenic
TATATCAAAATTGAATTATT+GGG 0.271986 tig0023765:-37984 None:intergenic
ACGGGAGTGTGTAATAGTTT+AGG 0.279188 tig0023765:+37943 Msa1411420:five_prime_UTR
AATTGAATTATTGGGTAATT+GGG 0.298393 tig0023765:-37976 None:intergenic
TTTCTCCCTCAAACGTGTTT+GGG 0.303636 tig0023765:-37908 None:intergenic
ACTCAAATAGTTTCAGATTA+GGG 0.309648 tig0023765:-41847 None:intergenic
ACATTTAACTAGTCCTTTGC+AGG 0.314305 tig0023765:-41465 None:intergenic
AGATGAAGAAAAGAAGAATT+TGG 0.338961 tig0023765:+38719 Msa1411420:CDS
CTGGTTGTTCCTTATGCAAT+AGG 0.347826 tig0023765:+41108 Msa1411420:CDS
CTCAGCCGTTCTTCCCCATA+TGG 0.348493 tig0023765:+41373 Msa1411420:CDS
CACTCAAATAGTTTCAGATT+AGG 0.349824 tig0023765:-41848 None:intergenic
TTTGCTTCAGCAGCTTGTTC+AGG 0.364001 tig0023765:+38770 Msa1411420:CDS
ATAATTTGCTTAGTGATAGA+AGG 0.372759 tig0023765:-40976 None:intergenic
CCATCTCGTTTCTTGTTTCA+GGG 0.376474 tig0023765:+41184 Msa1411420:CDS
CGAGTTGATTGGAGCTTGTA+GGG 0.380020 tig0023765:+41543 Msa1411420:three_prime_UTR
TATGATGCTGGGAGTGGATA+TGG 0.383976 tig0023765:-41083 None:intergenic
TCGAGTTGATTGGAGCTTGT+AGG 0.392106 tig0023765:+41542 Msa1411420:three_prime_UTR
GGCAATTGTTGCACTCATCT+TGG 0.392694 tig0023765:+38791 Msa1411420:CDS
TATATCCAATAAACCACAAT+AGG 0.395149 tig0023765:-38639 None:intergenic
CCTTTCACAACTGCTTTAAA+GGG 0.396867 tig0023765:-38744 None:intergenic
CTAGTTAAATGTAATTGTTA+TGG 0.403282 tig0023765:+41476 Msa1411420:exon
TCAAGTAGAAGACCCTCAAT+AGG 0.417783 tig0023765:-41147 None:intergenic
TCAGATCTAGCTGGGGCAAA+TGG 0.419591 tig0023765:-38061 None:intergenic
CACTGTGGTCTGTGGTTACC+CGG 0.436357 tig0023765:+41267 Msa1411420:CDS
AAATAAATGGAAGATATTGC+CGG 0.443740 tig0023765:-41286 None:intergenic
CTCAATAGGGTGATTGTAAA+GGG 0.448695 tig0023765:-41133 None:intergenic
TGTCTCCCAAACACGTTTGA+GGG 0.456899 tig0023765:+37903 Msa1411420:five_prime_UTR
ACGACAACATCAAATGCATC+AGG 0.459441 tig0023765:+40940 Msa1411420:CDS
GTGGTTTATTGGATATATGC+TGG 0.466288 tig0023765:+38645 Msa1411420:CDS
TCAGCCGTTCTTCCCCATAT+GGG 0.471141 tig0023765:+41374 Msa1411420:CDS
TAAAGGGCTCCTATTGCATA+AGG 0.471174 tig0023765:-41117 None:intergenic
TTGTCTCCCAAACACGTTTG+AGG 0.475414 tig0023765:+37902 Msa1411420:five_prime_UTR
CCATATGGGATAAAATTCTT+GGG 0.479913 tig0023765:+41388 Msa1411420:CDS
GAACAACCAGTCTATGATGC+TGG 0.480709 tig0023765:-41095 None:intergenic
CTTCTACTTGACACTGTTGG+TGG 0.482026 tig0023765:+41159 Msa1411420:CDS
CCTTTACAATCACCCTATTG+AGG 0.483901 tig0023765:+41134 Msa1411420:CDS
TTCCTTCTTTAGATAACTAC+CGG 0.488803 tig0023765:+38682 Msa1411420:CDS
CATCTCTCGTAGTATGCAAC+CGG 0.498885 tig0023765:-38701 None:intergenic
CCTCAATAGGGTGATTGTAA+AGG 0.505833 tig0023765:-41134 None:intergenic
CCCTTTAAAGCAGTTGTGAA+AGG 0.507083 tig0023765:+38744 Msa1411420:CDS
AATTGTGGATCAGATCTAGC+TGG 0.507556 tig0023765:-38070 None:intergenic
GGAGAAAGAAAGAAGGTTCA+CGG 0.508282 tig0023765:+37924 Msa1411420:five_prime_UTR
GAGAAAGAAAGAAGGTTCAC+GGG 0.509534 tig0023765:+37925 Msa1411420:five_prime_UTR
CAATGTTTGTGATGGATACA+TGG 0.513406 tig0023765:+41013 Msa1411420:CDS
CATTATTGCAATGTTTGTGA+TGG 0.518217 tig0023765:+41005 Msa1411420:CDS
CCAGTCTATGATGCTGGGAG+TGG 0.524885 tig0023765:-41089 None:intergenic
CTTTACAATCACCCTATTGA+GGG 0.525857 tig0023765:+41135 Msa1411420:CDS
AATGTCCGCAGTTAAGCCTC+TGG 0.527726 tig0023765:-41517 None:intergenic
GGGCTAAAGTTTCTAATGCA+TGG 0.528066 tig0023765:-41827 None:intergenic
CAAGTAGAAGACCCTCAATA+GGG 0.537000 tig0023765:-41146 None:intergenic
AACCGGTAGTTATCTAAAGA+AGG 0.541583 tig0023765:-38684 None:intergenic
AATAAATGGAAGATATTGCC+GGG 0.546549 tig0023765:-41285 None:intergenic
GCTCGCTTTACAAGATTGAA+AGG 0.546553 tig0023765:-41420 None:intergenic
AATCTTGTAAAGCGAGCCGA+AGG 0.547097 tig0023765:+41426 Msa1411420:CDS
AACAACCAGTCTATGATGCT+GGG 0.558768 tig0023765:-41094 None:intergenic
GACATTCATCATCAACTACA+AGG 0.561633 tig0023765:+41333 Msa1411420:CDS
GGTCTTCTACTTGACACTGT+TGG 0.565759 tig0023765:+41156 Msa1411420:CDS
ATCATCATCTTTGTTACAGT+AGG 0.567302 tig0023765:+41596 Msa1411420:three_prime_UTR
ATTGTGGATCAGATCTAGCT+GGG 0.571273 tig0023765:-38069 None:intergenic
CCACTCCCAGCATCATAGAC+TGG 0.571714 tig0023765:+41089 Msa1411420:CDS
TTATGCTACACAAGGTGGGT+TGG 0.579690 tig0023765:-41624 None:intergenic
CATTGTTATGCTACACAAGG+TGG 0.580875 tig0023765:-41629 None:intergenic
CCCTGAAACAAGAAACGAGA+TGG 0.588004 tig0023765:-41184 None:intergenic
TACAACTTTAAGTTCGAGCG+TGG 0.590612 tig0023765:+41790 Msa1411420:three_prime_UTR
AGCAAAGCAGAAGAATATAA+CGG 0.591784 tig0023765:-41223 None:intergenic
TTATCCCATATGGGGAAGAA+CGG 0.595766 tig0023765:-41378 None:intergenic
CGACAACATCAAATGCATCA+GGG 0.607921 tig0023765:+40941 Msa1411420:CDS
ATATGTGAGTGATGAAGTGA+TGG 0.610503 tig0023765:+38605 Msa1411420:CDS
TCTTGTAAAGCGAGCCGAAG+GGG 0.614150 tig0023765:+41428 Msa1411420:CDS
GTTTGAGGGAGAAAGAAAGA+AGG 0.616320 tig0023765:+37917 Msa1411420:five_prime_UTR
CATGGCAGTACTTTGTGCAT+CGG 0.619022 tig0023765:+41031 Msa1411420:CDS
ATTGTTATGCTACACAAGGT+GGG 0.619972 tig0023765:-41628 None:intergenic
GAGTTGATTGGAGCTTGTAG+GGG 0.626568 tig0023765:+41544 Msa1411420:three_prime_UTR
TTGACGACCACTGTGGTCTG+TGG 0.626742 tig0023765:+41259 Msa1411420:CDS
ATCTTGTAAAGCGAGCCGAA+GGG 0.633355 tig0023765:+41427 Msa1411420:CDS
CTTGTAAAGCGAGCCGAAGG+GGG 0.644126 tig0023765:+41429 Msa1411420:CDS
CATCATTGTTATGCTACACA+AGG 0.661913 tig0023765:-41632 None:intergenic
GACAACATCAAATGCATCAG+GGG 0.662868 tig0023765:+40942 Msa1411420:CDS
TATGTGAGTGATGAAGTGAT+GGG 0.680711 tig0023765:+38606 Msa1411420:CDS
ACATTCATCATCAACTACAA+GGG 0.680961 tig0023765:+41334 Msa1411420:CDS
ATGTGAGTGATGAAGTGATG+GGG 0.702468 tig0023765:+38607 Msa1411420:CDS
TGGGGCAAATGGATAAACAG+TGG 0.711250 tig0023765:-38050 None:intergenic
GTAGCATAACAATGATGTGG+TGG 0.713293 tig0023765:+41638 Msa1411420:three_prime_UTR
TTGTGGATCAGATCTAGCTG+GGG 0.717750 tig0023765:-38068 None:intergenic
TGTGTAGCATAACAATGATG+TGG 0.725931 tig0023765:+41635 Msa1411420:three_prime_UTR
AAAACTGTTGACGACCACTG+TGG 0.747970 tig0023765:+41252 Msa1411420:CDS
GATGCTGGGAGTGGATATGG+CGG 0.760121 tig0023765:-41080 None:intergenic
TGGAACCAGAGGCTTAACTG+CGG 0.767656 tig0023765:+41512 Msa1411420:three_prime_UTR
CGGGTAACCACAGACCACAG+TGG 0.767759 tig0023765:-41266 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! TATATCAAAATTGAATTATT+GGG - tig0023765:37987-38006 None:intergenic 10.0%
!! TTATATCAAAATTGAATTAT+TGG - tig0023765:37988-38007 None:intergenic 10.0%
!! ATTATATAAGTTTAAAAAAG+TGG - tig0023765:38570-38589 None:intergenic 10.0%
!!! ACTTTTTTAAACTTATATAA+TGG + tig0023765:38569-38588 Msa1411420:exon 10.0%
!! TAAAAAAGAATATTACTATT+AGG + tig0023765:39703-39722 Msa1411420:intron 10.0%
!!! TTATTCTTTTTTTTTTTTGA+AGG + tig0023765:40636-40655 Msa1411420:intron 10.0%
!!! TATTCTTTTTTTTTTTTGAA+GGG + tig0023765:40637-40656 Msa1411420:intron 10.0%
!!! TTTCAAAATTTGAAGTTTTT+AGG + tig0023765:38268-38287 Msa1411420:intron 15.0%
!! AAAAGAAACAAAATCAAAAA+AGG - tig0023765:38316-38335 None:intergenic 15.0%
!!! TTTTTTGATTTTGTTTCTTT+TGG + tig0023765:38315-38334 Msa1411420:intron 15.0%
!!! TTTTTGATTTTGTTTCTTTT+GGG + tig0023765:38316-38335 Msa1411420:intron 15.0%
!!! TACTTACAAAACATTTTTTA+AGG + tig0023765:41692-41711 Msa1411420:three_prime_UTR 15.0%
!!! TTTTTTGACAAGTTTTTTTA+AGG + tig0023765:41724-41743 Msa1411420:three_prime_UTR 15.0%
!! AATTGAATTATTGGGTAATT+GGG - tig0023765:37979-37998 None:intergenic 20.0%
!! AAATTGAATTATTGGGTAAT+TGG - tig0023765:37980-37999 None:intergenic 20.0%
!!! TTCAAACTTTTGAAGATTTT+TGG + tig0023765:38011-38030 Msa1411420:five_prime_UTR 20.0%
!!! TTTAAGTATGTTTTAATGTC+TGG + tig0023765:38224-38243 Msa1411420:intron 20.0%
!! ACTACATAATTCTTAAACTT+CGG - tig0023765:38347-38366 None:intergenic 20.0%
!! GGAAAAAATCAAAATCATTA+AGG - tig0023765:38422-38441 None:intergenic 20.0%
!!! ATTTTGATTTTTTCCTTTTC+AGG + tig0023765:38427-38446 Msa1411420:intron 20.0%
!!! TTTTGATTTTTTCCTTTTCA+GGG + tig0023765:38428-38447 Msa1411420:intron 20.0%
!!! AAACTTATATAATGGTTTTC+TGG + tig0023765:38577-38596 Msa1411420:exon 20.0%
!!! AACTTATATAATGGTTTTCT+GGG + tig0023765:38578-38597 Msa1411420:exon 20.0%
!! TATAAGAGAAACTATTTAGA+AGG + tig0023765:39138-39157 Msa1411420:intron 20.0%
!! AGTGGTATATAAATAAATTC+AGG - tig0023765:39670-39689 None:intergenic 20.0%
!!! TTTTATCATTGACAAAATAG+TGG - tig0023765:39688-39707 None:intergenic 20.0%
!! TTTATTATATGCAAAGAGAT+TGG - tig0023765:39805-39824 None:intergenic 20.0%
!! TACAATTGTCAAATATTAAC+AGG + tig0023765:39875-39894 Msa1411420:intron 20.0%
!! ATTCAGTATTAAAGTAAACA+TGG + tig0023765:39989-40008 Msa1411420:intron 20.0%
!!! TTTTTATGTTTAGTTAATGC+TGG + tig0023765:40035-40054 Msa1411420:intron 20.0%
!! TATATCTACAGGAAATTAAT+TGG - tig0023765:40557-40576 None:intergenic 20.0%
!!! TTTTTTTTTTTTGAAGGGAA+AGG + tig0023765:40642-40661 Msa1411420:intron 20.0%
!!! TTTTTTTTTTTGAAGGGAAA+GGG + tig0023765:40643-40662 Msa1411420:intron 20.0%
!! GTTGATTATAATATAAGCTT+TGG + tig0023765:40868-40887 Msa1411420:intron 20.0%
!!! TGTTATTCTGGAAAAATAAA+TGG - tig0023765:41302-41321 None:intergenic 20.0%
!! CTAGTTAAATGTAATTGTTA+TGG + tig0023765:41476-41495 Msa1411420:exon 20.0%
!! TATTTTACCATATTCTCTTC+TGG + tig0023765:38163-38182 Msa1411420:intron 25.0%
!! ATTTTACCATATTCTCTTCT+GGG + tig0023765:38164-38183 Msa1411420:intron 25.0%
!!! AATTTGAAGTTTTTAGGTTG+TGG + tig0023765:38274-38293 Msa1411420:intron 25.0%
!!! ATTTGAAGTTTTTAGGTTGT+GGG + tig0023765:38275-38294 Msa1411420:intron 25.0%
!!! GTTGTTTTAGCATAAAATTG+AGG + tig0023765:38539-38558 Msa1411420:five_prime_UTR 25.0%
! TATATCCAATAAACCACAAT+AGG - tig0023765:38642-38661 None:intergenic 25.0%
! AGATGAAGAAAAGAAGAATT+TGG + tig0023765:38719-38738 Msa1411420:CDS 25.0%
! AGAGTGATTTATAATTCATC+AGG + tig0023765:39367-39386 Msa1411420:intron 25.0%
! GAGTGATTTATAATTCATCA+GGG + tig0023765:39368-39387 Msa1411420:intron 25.0%
!! TTATAATTCATCAGGGATTT+TGG + tig0023765:39375-39394 Msa1411420:intron 25.0%
! ATCAAACTATTACATAGTGT+GGG - tig0023765:39507-39526 None:intergenic 25.0%
! AATCAAACTATTACATAGTG+TGG - tig0023765:39508-39527 None:intergenic 25.0%
! TTTGGTACAAGTTTATTGTT+GGG - tig0023765:39547-39566 None:intergenic 25.0%
!! TTTTGGTACAAGTTTATTGT+TGG - tig0023765:39548-39567 None:intergenic 25.0%
!!! AAACGGGTTATATTGAATTT+TGG - tig0023765:39565-39584 None:intergenic 25.0%
! AGAATATTACTATTAGGAGT+TGG + tig0023765:39709-39728 Msa1411420:intron 25.0%
! GAATATTACTATTAGGAGTT+GGG + tig0023765:39710-39729 Msa1411420:intron 25.0%
!! TACTAAAATGGTTGTTTCAA+GGG - tig0023765:39830-39849 None:intergenic 25.0%
! GTACTAAAATGACTTATCTT+TGG - tig0023765:39858-39877 None:intergenic 25.0%
!!! ACATAAAAAGAAGAGTACTA+TGG - tig0023765:40024-40043 None:intergenic 25.0%
! TTTGTAAAAAGACAACTTGT+TGG - tig0023765:40145-40164 None:intergenic 25.0%
! ACTTCTGAATTATATCTAGA+GGG - tig0023765:40260-40279 None:intergenic 25.0%
!! CTTATGATTTTCAATTCACT+AGG - tig0023765:40434-40453 None:intergenic 25.0%
!!! ATAATTTGCTTAGTGATAGA+AGG - tig0023765:40979-40998 None:intergenic 25.0%
! AAATAAATGGAAGATATTGC+CGG - tig0023765:41289-41308 None:intergenic 25.0%
GGAAAAAGTAGAATGAATTG+TGG - tig0023765:38088-38107 None:intergenic 30.0%
!!! TACTTTTTCCTACCTCAAAA+AGG + tig0023765:38098-38117 Msa1411420:five_prime_UTR 30.0%
!! ACTTTTTCCTACCTCAAAAA+GGG + tig0023765:38099-38118 Msa1411420:five_prime_UTR 30.0%
!! TCAAATCGTTTTTCATCATC+TGG + tig0023765:38133-38152 Msa1411420:five_prime_UTR 30.0%
!! CAAATCGTTTTTCATCATCT+GGG + tig0023765:38134-38153 Msa1411420:five_prime_UTR 30.0%
!! AAATCGTTTTTCATCATCTG+GGG + tig0023765:38135-38154 Msa1411420:five_prime_UTR 30.0%
ATCAAAATCATTAAGGCTGT+TGG - tig0023765:38415-38434 None:intergenic 30.0%
!!! ACTTGCTGCTTTTGATTTTT+TGG + tig0023765:38501-38520 Msa1411420:five_prime_UTR 30.0%
!!! CTTGCTGCTTTTGATTTTTT+GGG + tig0023765:38502-38521 Msa1411420:five_prime_UTR 30.0%
!!! TGCTTTTGATTTTTTGGGTT+GGG + tig0023765:38507-38526 Msa1411420:five_prime_UTR 30.0%
!! TATATAATGGTTTTCTGGGA+AGG + tig0023765:38582-38601 Msa1411420:exon 30.0%
TTCCTTCTTTAGATAACTAC+CGG + tig0023765:38682-38701 Msa1411420:CDS 30.0%
GTGTGAACAACTATTATTAC+TGG - tig0023765:38849-38868 None:intergenic 30.0%
AAGTAGAAACTAGACTTAGA+TGG + tig0023765:39026-39045 Msa1411420:intron 30.0%
AAGACTTGGATTATGTAGTA+AGG + tig0023765:39056-39075 Msa1411420:intron 30.0%
! GTTTCTCTTATAGTTTTTCC+AGG - tig0023765:39130-39149 None:intergenic 30.0%
TGTTGTTGTCTCTATTTAGT+TGG + tig0023765:39242-39261 Msa1411420:intron 30.0%
TGTACTCTGTTAAAGCTAAA+CGG + tig0023765:39441-39460 Msa1411420:intron 30.0%
CATAAAATAGAGTTCCAACT+TGG - tig0023765:39603-39622 None:intergenic 30.0%
TAAAGTGAACATAACTTCAG+GGG - tig0023765:39634-39653 None:intergenic 30.0%
CTAAAGTGAACATAACTTCA+GGG - tig0023765:39635-39654 None:intergenic 30.0%
GATAGGAAACTCTTCTTAAA+TGG + tig0023765:39739-39758 Msa1411420:intron 30.0%
! TGTTCTAATTGAAGCCATTT+TGG - tig0023765:39775-39794 None:intergenic 30.0%
! CTACTAAAATGGTTGTTTCA+AGG - tig0023765:39831-39850 None:intergenic 30.0%
TCAAATATTAACAGGTGTAG+AGG + tig0023765:39883-39902 Msa1411420:intron 30.0%
CAAATATTAACAGGTGTAGA+GGG + tig0023765:39884-39903 Msa1411420:intron 30.0%
TTCATTTCCAACAAAGTTCA+AGG - tig0023765:40074-40093 None:intergenic 30.0%
ACAAAACATGTCATGTAAAC+AGG + tig0023765:40160-40179 Msa1411420:intron 30.0%
TATATCTAGAGGGAAATTCA+GGG - tig0023765:40250-40269 None:intergenic 30.0%
TTATATCTAGAGGGAAATTC+AGG - tig0023765:40251-40270 None:intergenic 30.0%
GACTTCTGAATTATATCTAG+AGG - tig0023765:40261-40280 None:intergenic 30.0%
TAGATATAATTCAGAAGTCC+TGG + tig0023765:40262-40281 Msa1411420:intron 30.0%
AGCAGTTATATTAATAGTCC+TGG + tig0023765:40454-40473 Msa1411420:intron 30.0%
!! AATTCAGTTTTATGTCTGGT+TGG + tig0023765:40748-40767 Msa1411420:intron 30.0%
TAACATATCTAACATGTGCT+TGG + tig0023765:40901-40920 Msa1411420:intron 30.0%
CATTATTGCAATGTTTGTGA+TGG + tig0023765:41005-41024 Msa1411420:CDS 30.0%
AGCAAAGCAGAAGAATATAA+CGG - tig0023765:41226-41245 None:intergenic 30.0%
AATAAATGGAAGATATTGCC+GGG - tig0023765:41288-41307 None:intergenic 30.0%
ACATTCATCATCAACTACAA+GGG + tig0023765:41334-41353 Msa1411420:CDS 30.0%
! CAAGAATTTTATCCCATATG+GGG - tig0023765:41389-41408 None:intergenic 30.0%
! CCAAGAATTTTATCCCATAT+GGG - tig0023765:41390-41409 None:intergenic 30.0%
CCATATGGGATAAAATTCTT+GGG + tig0023765:41388-41407 Msa1411420:CDS 30.0%
!!! GTTATGGCAAATTTTTTCGA+TGG + tig0023765:41492-41511 Msa1411420:three_prime_UTR 30.0%
ATCATCATCTTTGTTACAGT+AGG + tig0023765:41596-41615 Msa1411420:three_prime_UTR 30.0%
! AGAATGAGAAACCCTTTTTG+AGG - tig0023765:38113-38132 None:intergenic 35.0%
AAGAAACCCAGAAGAGAATA+TGG - tig0023765:38173-38192 None:intergenic 35.0%
!! TTTCCTTTTCAGGGTTTTGA+AGG + tig0023765:38437-38456 Msa1411420:intron 35.0%
!!! CTGCTTTTGATTTTTTGGGT+TGG + tig0023765:38506-38525 Msa1411420:five_prime_UTR 35.0%
!!! TTTGATTTTTTGGGTTGGGT+TGG + tig0023765:38511-38530 Msa1411420:five_prime_UTR 35.0%
!!! TTGATTTTTTGGGTTGGGTT+GGG + tig0023765:38512-38531 Msa1411420:five_prime_UTR 35.0%
ATATGTGAGTGATGAAGTGA+TGG + tig0023765:38605-38624 Msa1411420:CDS 35.0%
TATGTGAGTGATGAAGTGAT+GGG + tig0023765:38606-38625 Msa1411420:CDS 35.0%
TTGCTCCTATTGTGGTTTAT+TGG + tig0023765:38634-38653 Msa1411420:CDS 35.0%
GTGGTTTATTGGATATATGC+TGG + tig0023765:38645-38664 Msa1411420:CDS 35.0%
AACCGGTAGTTATCTAAAGA+AGG - tig0023765:38687-38706 None:intergenic 35.0%
! CCTTTCACAACTGCTTTAAA+GGG - tig0023765:38747-38766 None:intergenic 35.0%
ACCTTTCACAACTGCTTTAA+AGG - tig0023765:38748-38767 None:intergenic 35.0%
GGATCTAGAGATTAATGAGT+TGG + tig0023765:39159-39178 Msa1411420:intron 35.0%
! TAATGAGTTGGAGAAAGACA+TGG + tig0023765:39171-39190 Msa1411420:intron 35.0%
TAAAGCAACACCAAGAATTG+GGG - tig0023765:39272-39291 None:intergenic 35.0%
GTAAAGCAACACCAAGAATT+GGG - tig0023765:39273-39292 None:intergenic 35.0%
AGTAAAGCAACACCAAGAAT+TGG - tig0023765:39274-39293 None:intergenic 35.0%
! CTACTCTTAGCTCTCAATTT+GGG - tig0023765:39308-39327 None:intergenic 35.0%
! ACTACTCTTAGCTCTCAATT+TGG - tig0023765:39309-39328 None:intergenic 35.0%
AGCTAAGAGTAGTAGATAAG+AGG + tig0023765:39316-39335 Msa1411420:intron 35.0%
!! GTTGCTTTCTCATGTTTTGA+CGG + tig0023765:39403-39422 Msa1411420:intron 35.0%
!! TTTTGACGGACACAATGTTT+TGG + tig0023765:39417-39436 Msa1411420:intron 35.0%
!! TTTGACGGACACAATGTTTT+GGG + tig0023765:39418-39437 Msa1411420:intron 35.0%
CAAGTTTATTGTTGGGACTT+GGG - tig0023765:39540-39559 None:intergenic 35.0%
ACAAGTTTATTGTTGGGACT+TGG - tig0023765:39541-39560 None:intergenic 35.0%
GAGTTATGCAAATGGAAAAC+GGG - tig0023765:39581-39600 None:intergenic 35.0%
GGAGTTATGCAAATGGAAAA+CGG - tig0023765:39582-39601 None:intergenic 35.0%
CCTAAAGTGAACATAACTTC+AGG - tig0023765:39636-39655 None:intergenic 35.0%
CCTGAAGTTATGTTCACTTT+AGG + tig0023765:39633-39652 Msa1411420:intron 35.0%
TATTACTATTAGGAGTTGGG+AGG + tig0023765:39713-39732 Msa1411420:intron 35.0%
TATATGCAAAGAGATTGGAC+AGG - tig0023765:39800-39819 None:intergenic 35.0%
!! TCTTTGGAGCTCTACTAAAA+TGG - tig0023765:39842-39861 None:intergenic 35.0%
TGCAACACTACCATAAAGTA+TGG + tig0023765:39932-39951 Msa1411420:intron 35.0%
GCAACACTACCATAAAGTAT+GGG + tig0023765:39933-39952 Msa1411420:intron 35.0%
!! ATTCAGCGTGTTTTTGAACT+TGG + tig0023765:39957-39976 Msa1411420:intron 35.0%
ACAAAGTTCAAGGATAACCA+CGG - tig0023765:40064-40083 None:intergenic 35.0%
TGGTTATCCTTGAACTTTGT+TGG + tig0023765:40064-40083 Msa1411420:intron 35.0%
ATCTATATCTGTGTCAGTTG+AGG + tig0023765:40317-40336 Msa1411420:intron 35.0%
TTAAAACGCGAAACTGTGTT+TGG + tig0023765:40360-40379 Msa1411420:intron 35.0%
TTGTGCCTCTTAATTGGAAA+AGG - tig0023765:40411-40430 None:intergenic 35.0%
CAGCAAGAGAATATATCTAC+AGG - tig0023765:40568-40587 None:intergenic 35.0%
ATACTAATGGCATGTGTTTG+AGG + tig0023765:40713-40732 Msa1411420:intron 35.0%
TACTAATGGCATGTGTTTGA+GGG + tig0023765:40714-40733 Msa1411420:intron 35.0%
!! AGGGAATTCAGTTTTATGTC+TGG + tig0023765:40744-40763 Msa1411420:intron 35.0%
!! AGTTTTATGTCTGGTTGGTT+GGG + tig0023765:40753-40772 Msa1411420:intron 35.0%
AATACAATAACCCAACCTCT+TGG - tig0023765:40799-40818 None:intergenic 35.0%
AGAATAACATTCTGCAGAGT+TGG - tig0023765:40839-40858 None:intergenic 35.0%
!! CAATGTTTGTGATGGATACA+TGG + tig0023765:41013-41032 Msa1411420:CDS 35.0%
CTCAATAGGGTGATTGTAAA+GGG - tig0023765:41136-41155 None:intergenic 35.0%
CTTTACAATCACCCTATTGA+GGG + tig0023765:41135-41154 Msa1411420:CDS 35.0%
GACATTCATCATCAACTACA+AGG + tig0023765:41333-41352 Msa1411420:CDS 35.0%
CCCATATGGGATAAAATTCT+TGG + tig0023765:41387-41406 Msa1411420:CDS 35.0%
! CCCAAGAATTTTATCCCATA+TGG - tig0023765:41391-41410 None:intergenic 35.0%
ACATTTAACTAGTCCTTTGC+AGG - tig0023765:41468-41487 None:intergenic 35.0%
!!! AATTTTTTCGATGGAACCAG+AGG + tig0023765:41501-41520 Msa1411420:three_prime_UTR 35.0%
ATTGTTATGCTACACAAGGT+GGG - tig0023765:41631-41650 None:intergenic 35.0%
CATCATTGTTATGCTACACA+AGG - tig0023765:41635-41654 None:intergenic 35.0%
TGTGTAGCATAACAATGATG+TGG + tig0023765:41635-41654 Msa1411420:three_prime_UTR 35.0%
TTTCTCCCTCAAACGTGTTT+GGG - tig0023765:37911-37930 None:intergenic 40.0%
GTTTGAGGGAGAAAGAAAGA+AGG + tig0023765:37917-37936 Msa1411420:five_prime_UTR 40.0%
GGAGAAAGAAAGAAGGTTCA+CGG + tig0023765:37924-37943 Msa1411420:five_prime_UTR 40.0%
GAGAAAGAAAGAAGGTTCAC+GGG + tig0023765:37925-37944 Msa1411420:five_prime_UTR 40.0%
! ACGGGAGTGTGTAATAGTTT+AGG + tig0023765:37943-37962 Msa1411420:five_prime_UTR 40.0%
! CGGGAGTGTGTAATAGTTTA+GGG + tig0023765:37944-37963 Msa1411420:five_prime_UTR 40.0%
ATTGTGGATCAGATCTAGCT+GGG - tig0023765:38072-38091 None:intergenic 40.0%
AATTGTGGATCAGATCTAGC+TGG - tig0023765:38073-38092 None:intergenic 40.0%
!!! TGAGAAACCCTTTTTGAGGT+AGG - tig0023765:38109-38128 None:intergenic 40.0%
!! TTTAGGTTGTGGGAACTATG+TGG + tig0023765:38285-38304 Msa1411420:intron 40.0%
GTTCCTTCAAAACCCTGAAA+AGG - tig0023765:38443-38462 None:intergenic 40.0%
ATGTGAGTGATGAAGTGATG+GGG + tig0023765:38607-38626 Msa1411420:CDS 40.0%
!! CCCTTTAAAGCAGTTGTGAA+AGG + tig0023765:38744-38763 Msa1411420:CDS 40.0%
TAGATGGTAGAGAGAAGACT+TGG + tig0023765:39042-39061 Msa1411420:intron 40.0%
GAGTCAAATCACAAGAGGTA+GGG + tig0023765:39099-39118 Msa1411420:intron 40.0%
!!! AGTTGGTTTTCCCCAATTCT+TGG + tig0023765:39259-39278 Msa1411420:intron 40.0%
CTGTGACTCTTCTAACTGTA+TGG + tig0023765:39341-39360 Msa1411420:intron 40.0%
CCAACTTGGAGTTATGCAAA+TGG - tig0023765:39589-39608 None:intergenic 40.0%
CCATTTGCATAACTCCAAGT+TGG + tig0023765:39586-39605 Msa1411420:intron 40.0%
TGAACATAACTTCAGGGGAA+TGG - tig0023765:39629-39648 None:intergenic 40.0%
! ATGGTAGAAGCATGCCAAAA+TGG + tig0023765:39758-39777 Msa1411420:intron 40.0%
CGCTGAATTCCCATACTTTA+TGG - tig0023765:39945-39964 None:intergenic 40.0%
TTAGTTAATGCTGGATTCCG+TGG + tig0023765:40044-40063 Msa1411420:intron 40.0%
AATAGATCGACCTTGTTCAC+TGG - tig0023765:40199-40218 None:intergenic 40.0%
TTGACAACTGCTTAACACAC+AGG - tig0023765:40298-40317 None:intergenic 40.0%
CCTCTTAATTGGAAAAGGTC+AGG - tig0023765:40406-40425 None:intergenic 40.0%
! CCTGACCTTTTCCAATTAAG+AGG + tig0023765:40403-40422 Msa1411420:intron 40.0%
ACTAGGTTGTGCCTCTTAAT+TGG - tig0023765:40417-40436 None:intergenic 40.0%
ACTAATGGCATGTGTTTGAG+GGG + tig0023765:40715-40734 Msa1411420:intron 40.0%
!! CAGTTTTATGTCTGGTTGGT+TGG + tig0023765:40752-40771 Msa1411420:intron 40.0%
CTCTCTAATTCCAAGAGGTT+GGG + tig0023765:40786-40805 Msa1411420:intron 40.0%
ACGACAACATCAAATGCATC+AGG + tig0023765:40940-40959 Msa1411420:CDS 40.0%
CGACAACATCAAATGCATCA+GGG + tig0023765:40941-40960 Msa1411420:CDS 40.0%
GACAACATCAAATGCATCAG+GGG + tig0023765:40942-40961 Msa1411420:CDS 40.0%
AACAACCAGTCTATGATGCT+GGG - tig0023765:41097-41116 None:intergenic 40.0%
CTGGTTGTTCCTTATGCAAT+AGG + tig0023765:41108-41127 Msa1411420:CDS 40.0%
TAAAGGGCTCCTATTGCATA+AGG - tig0023765:41120-41139 None:intergenic 40.0%
CCTCAATAGGGTGATTGTAA+AGG - tig0023765:41137-41156 None:intergenic 40.0%
CCTTTACAATCACCCTATTG+AGG + tig0023765:41134-41153 Msa1411420:CDS 40.0%
CAAGTAGAAGACCCTCAATA+GGG - tig0023765:41149-41168 None:intergenic 40.0%
TCAAGTAGAAGACCCTCAAT+AGG - tig0023765:41150-41169 None:intergenic 40.0%
! CCATCTCGTTTCTTGTTTCA+GGG + tig0023765:41184-41203 Msa1411420:CDS 40.0%
! CATGATACGCAGTGTTATTC+TGG - tig0023765:41314-41333 None:intergenic 40.0%
TTATCCCATATGGGGAAGAA+CGG - tig0023765:41381-41400 None:intergenic 40.0%
GCTCGCTTTACAAGATTGAA+AGG - tig0023765:41423-41442 None:intergenic 40.0%
!!! CGGACATTTTTCGAGTTGAT+TGG + tig0023765:41532-41551 Msa1411420:three_prime_UTR 40.0%
CATTGTTATGCTACACAAGG+TGG - tig0023765:41632-41651 None:intergenic 40.0%
GTAGCATAACAATGATGTGG+TGG + tig0023765:41638-41657 Msa1411420:three_prime_UTR 40.0%
! TACAACTTTAAGTTCGAGCG+TGG + tig0023765:41790-41809 Msa1411420:three_prime_UTR 40.0%
GGGCTAAAGTTTCTAATGCA+TGG - tig0023765:41830-41849 None:intergenic 40.0%
TTGTCTCCCAAACACGTTTG+AGG + tig0023765:37902-37921 Msa1411420:five_prime_UTR 45.0%
TGTCTCCCAAACACGTTTGA+GGG + tig0023765:37903-37922 Msa1411420:five_prime_UTR 45.0%
CTTTCTCCCTCAAACGTGTT+TGG - tig0023765:37912-37931 None:intergenic 45.0%
TGGGGCAAATGGATAAACAG+TGG - tig0023765:38053-38072 None:intergenic 45.0%
TTGTGGATCAGATCTAGCTG+GGG - tig0023765:38071-38090 None:intergenic 45.0%
!!! TTTTTTGGGTTGGGTTGGGT+TGG + tig0023765:38516-38535 Msa1411420:five_prime_UTR 45.0%
!!! TTTTTGGGTTGGGTTGGGTT+GGG + tig0023765:38517-38536 Msa1411420:five_prime_UTR 45.0%
CATCTCTCGTAGTATGCAAC+CGG - tig0023765:38704-38723 None:intergenic 45.0%
! TTTGCTTCAGCAGCTTGTTC+AGG + tig0023765:38770-38789 Msa1411420:CDS 45.0%
GGCAATTGTTGCACTCATCT+TGG + tig0023765:38791-38810 Msa1411420:CDS 45.0%
AAGGAGAGTAGATCAGACGA+AGG + tig0023765:39075-39094 Msa1411420:intron 45.0%
AGGAGAGTAGATCAGACGAA+GGG + tig0023765:39076-39095 Msa1411420:intron 45.0%
AAGGGGAGTCAAATCACAAG+AGG + tig0023765:39094-39113 Msa1411420:intron 45.0%
GGAGTCAAATCACAAGAGGT+AGG + tig0023765:39098-39117 Msa1411420:intron 45.0%
GTTTATTGTTGGGACTTGGG+AGG - tig0023765:39537-39556 None:intergenic 45.0%
TTGATCCAGTCCAGTGAACA+AGG + tig0023765:40186-40205 Msa1411420:intron 45.0%
CTAGGCTCTCTAATTCCAAG+AGG + tig0023765:40781-40800 Msa1411420:intron 45.0%
GCTCTCTAATTCCAAGAGGT+TGG + tig0023765:40785-40804 Msa1411420:intron 45.0%
CATGGCAGTACTTTGTGCAT+CGG + tig0023765:41031-41050 Msa1411420:CDS 45.0%
TATGATGCTGGGAGTGGATA+TGG - tig0023765:41086-41105 None:intergenic 45.0%
GAACAACCAGTCTATGATGC+TGG - tig0023765:41098-41117 None:intergenic 45.0%
GGTCTTCTACTTGACACTGT+TGG + tig0023765:41156-41175 Msa1411420:CDS 45.0%
CTTCTACTTGACACTGTTGG+TGG + tig0023765:41159-41178 Msa1411420:CDS 45.0%
! GCCATCTCGTTTCTTGTTTC+AGG + tig0023765:41183-41202 Msa1411420:CDS 45.0%
CCCTGAAACAAGAAACGAGA+TGG - tig0023765:41187-41206 None:intergenic 45.0%
AAAACTGTTGACGACCACTG+TGG + tig0023765:41252-41271 Msa1411420:CDS 45.0%
AATCTTGTAAAGCGAGCCGA+AGG + tig0023765:41426-41445 Msa1411420:CDS 45.0%
ATCTTGTAAAGCGAGCCGAA+GGG + tig0023765:41427-41446 Msa1411420:CDS 45.0%
!! TCGAGTTGATTGGAGCTTGT+AGG + tig0023765:41542-41561 Msa1411420:three_prime_UTR 45.0%
!! CGAGTTGATTGGAGCTTGTA+GGG + tig0023765:41543-41562 Msa1411420:three_prime_UTR 45.0%
! GAGTTGATTGGAGCTTGTAG+GGG + tig0023765:41544-41563 Msa1411420:three_prime_UTR 45.0%
!! GGAGCTTGTAGGGGTTTTAT+TGG + tig0023765:41553-41572 Msa1411420:three_prime_UTR 45.0%
!!! GCTTGTAGGGGTTTTATTGG+TGG + tig0023765:41556-41575 Msa1411420:three_prime_UTR 45.0%
!!! TAGGGGTTTTATTGGTGGCT+TGG + tig0023765:41561-41580 Msa1411420:three_prime_UTR 45.0%
TTATGCTACACAAGGTGGGT+TGG - tig0023765:41627-41646 None:intergenic 45.0%
!! TATTATTAAATAAATACTAA+TGG + tig0023765:40700-40719 Msa1411420:intron 5.0%
TCAGATCTAGCTGGGGCAAA+TGG - tig0023765:38064-38083 None:intergenic 50.0%
GGTTGTGGGAACTATGTGGT+TGG + tig0023765:38289-38308 Msa1411420:intron 50.0%
! GGGGACTTTTGCTCCTATTG+TGG + tig0023765:38626-38645 Msa1411420:CDS 50.0%
GGAGAGTAGATCAGACGAAG+GGG + tig0023765:39077-39096 Msa1411420:intron 50.0%
ACAAGAGGTAGGGAAAGACC+TGG + tig0023765:39109-39128 Msa1411420:intron 50.0%
! AAGCCTTATCCCACTAAGCG+GGG - tig0023765:39219-39238 None:intergenic 50.0%
! CAAGCCTTATCCCACTAAGC+GGG - tig0023765:39220-39239 None:intergenic 50.0%
! CCAAGCCTTATCCCACTAAG+CGG - tig0023765:39221-39240 None:intergenic 50.0%
TAGGAGTTGGGAGGCAAGAT+AGG + tig0023765:39722-39741 Msa1411420:intron 50.0%
! AGAGATCATGTCGCACTGGT+TGG - tig0023765:40119-40138 None:intergenic 50.0%
GTCAAGAGATCATGTCGCAC+TGG - tig0023765:40123-40142 None:intergenic 50.0%
ATCGACCTTGTTCACTGGAC+TGG - tig0023765:40194-40213 None:intergenic 50.0%
CACACAGGCGACAAAAATCC+AGG - tig0023765:40283-40302 None:intergenic 50.0%
CAGTGCTAGAAGCAGTAACC+AGG - tig0023765:40475-40494 None:intergenic 50.0%
TGGCATGTGTTTGAGGGGAA+AGG + tig0023765:40720-40739 Msa1411420:intron 50.0%
GGCATGTGTTTGAGGGGAAA+GGG + tig0023765:40721-40740 Msa1411420:intron 50.0%
ATGTGTTTGAGGGGAAAGGG+AGG + tig0023765:40724-40743 Msa1411420:intron 50.0%
TGTGTTTGAGGGGAAAGGGA+GGG + tig0023765:40725-40744 Msa1411420:intron 50.0%
TCAGCCGTTCTTCCCCATAT+GGG + tig0023765:41374-41393 Msa1411420:CDS 50.0%
TCTTGTAAAGCGAGCCGAAG+GGG + tig0023765:41428-41447 Msa1411420:CDS 50.0%
!!! TTTTGAGGCAAGGCCTGCAA+AGG + tig0023765:41452-41471 Msa1411420:CDS 50.0%
TGGAACCAGAGGCTTAACTG+CGG + tig0023765:41512-41531 Msa1411420:three_prime_UTR 50.0%
AATGTCCGCAGTTAAGCCTC+TGG - tig0023765:41520-41539 None:intergenic 50.0%
ATGTAGCCAACCCCGCTTAG+TGG + tig0023765:39206-39225 Msa1411420:intron 55.0%
TGTAGCCAACCCCGCTTAGT+GGG + tig0023765:39207-39226 Msa1411420:intron 55.0%
CTTATCCCACTAAGCGGGGT+TGG - tig0023765:39215-39234 None:intergenic 55.0%
CAACCCCGCTTAGTGGGATA+AGG + tig0023765:39213-39232 Msa1411420:intron 55.0%
CCGCTTAGTGGGATAAGGCT+TGG + tig0023765:39218-39237 Msa1411420:intron 55.0%
! CTGGTTGGTTGGGAGAGACT+AGG + tig0023765:40763-40782 Msa1411420:intron 55.0%
GATGCTGGGAGTGGATATGG+CGG - tig0023765:41083-41102 None:intergenic 55.0%
CCAGTCTATGATGCTGGGAG+TGG - tig0023765:41092-41111 None:intergenic 55.0%
CCACTCCCAGCATCATAGAC+TGG + tig0023765:41089-41108 Msa1411420:CDS 55.0%
TTGACGACCACTGTGGTCTG+TGG + tig0023765:41259-41278 Msa1411420:CDS 55.0%
CACTGTGGTCTGTGGTTACC+CGG + tig0023765:41267-41286 Msa1411420:CDS 55.0%
CTCAGCCGTTCTTCCCCATA+TGG + tig0023765:41373-41392 Msa1411420:CDS 55.0%
CTTGTAAAGCGAGCCGAAGG+GGG + tig0023765:41429-41448 Msa1411420:CDS 55.0%
CCTTGCCTCAAAACCCCCTT+CGG - tig0023765:41445-41464 None:intergenic 55.0%
CGGGTAACCACAGACCACAG+TGG - tig0023765:41269-41288 None:intergenic 60.0%
!!! CCGAAGGGGGTTTTGAGGCA+AGG + tig0023765:41442-41461 Msa1411420:CDS 60.0%
! GCGAGCCGAAGGGGGTTTTG+AGG + tig0023765:41437-41456 Msa1411420:CDS 65.0%
Chromosome Type Strat End Strand Name
tig0023765 gene 37901 41860 37901 ID=Msa1411420;Name=Msa1411420
tig0023765 mRNA 37901 41860 37901 ID=Msa1411420-mRNA-1;Parent=Msa1411420;Name=Msa1411420-mRNA-1;_AED=0.03;_eAED=0.03;_QI=395|1|1|1|0.5|0.33|3|381|255
tig0023765 exon 37901 38156 37901 ID=Msa1411420-mRNA-1:exon:20096;Parent=Msa1411420-mRNA-1
tig0023765 exon 38449 38812 38449 ID=Msa1411420-mRNA-1:exon:20097;Parent=Msa1411420-mRNA-1
tig0023765 exon 40937 41860 40937 ID=Msa1411420-mRNA-1:exon:20098;Parent=Msa1411420-mRNA-1
tig0023765 five_prime_UTR 37901 38156 37901 ID=Msa1411420-mRNA-1:five_prime_utr;Parent=Msa1411420-mRNA-1
tig0023765 five_prime_UTR 38449 38587 38449 ID=Msa1411420-mRNA-1:five_prime_utr;Parent=Msa1411420-mRNA-1
tig0023765 CDS 38588 38812 38588 ID=Msa1411420-mRNA-1:cds;Parent=Msa1411420-mRNA-1
tig0023765 CDS 40937 41479 40937 ID=Msa1411420-mRNA-1:cds;Parent=Msa1411420-mRNA-1
tig0023765 three_prime_UTR 41480 41860 41480 ID=Msa1411420-mRNA-1:three_prime_utr;Parent=Msa1411420-mRNA-1
Gene Sequence

>Msa1411420

ATGGTTTTCTGGGAAGGATATGTGAGTGATGAAGTGATGGGGACTTTTGCTCCTATTGTGGTTTATTGGATATATGCTGGATTTTATCAATTGCTTCCTTCTTTAGATAACTACCGGTTGCATACTACGAGAGATGAAGAAAAGAAGAATTTGGTGCCCTTTAAAGCAGTTGTGAAAGGTGTTTTGCTTCAGCAGCTTGTTCAGGCAATTGTTGCACTCATCTTGTTGACGACAACATCAAATGCATCAGGGGTTACAGTGCAGCCTTCTATCACTAAGCAAATTATTCAGATCATTATTGCAATGTTTGTGATGGATACATGGCAGTACTTTGTGCATCGGTACATGCATCAGAACAAGTTTTTATACCGCCATATCCACTCCCAGCATCATAGACTGGTTGTTCCTTATGCAATAGGAGCCCTTTACAATCACCCTATTGAGGGTCTTCTACTTGACACTGTTGGTGGAGCCATCTCGTTTCTTGTTTCAGGGATGACTGCGAGAACAGCCGTTATATTCTTCTGCTTTGCTGTTGTGAAAACTGTTGACGACCACTGTGGTCTGTGGTTACCCGGCAATATCTTCCATTTATTTTTCCAGAATAACACTGCGTATCATGACATTCATCATCAACTACAAGGGCTGAAATACAATTATTCTCAGCCGTTCTTCCCCATATGGGATAAAATTCTTGGGACACACATGCCTTTCAATCTTGTAAAGCGAGCCGAAGGGGGTTTTGAGGCAAGGCCTGCAAAGGACTAG
Protein sequence

>Msa1411420

MVFWEGYVSDEVMGTFAPIVVYWIYAGFYQLLPSLDNYRLHTTRDEEKKNLVPFKAVVKGVLLQQLVQAIVALILLTTTSNASGVTVQPSITKQIIQIIIAMFVMDTWQYFVHRYMHQNKFLYRHIHSQHHRLVVPYAIGALYNHPIEGLLLDTVGGAISFLVSGMTARTAVIFFCFAVVKTVDDHCGLWLPGNIFHLFFQNNTAYHDIHHQLQGLKYNYSQPFFPIWDKILGTHMPFNLVKRAEGGFEARPAKD*