Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1331300 | sp|Q9SHC8|VAP12_ARATH | 66.527 | 239 | 77 | 2 | 5 | 242 | 3 | 239 | 2.50e-107 | 312 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1331300 | G7JIX5 | 97.107 | 242 | 7 | 0 | 1 | 242 | 1 | 242 | 1.71e-172 | 483 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0016540 | Msa1331300 | 0.806056 | 9.899135e-50 | -8.615850e-47 |
| Msa0037180 | Msa1331300 | 0.833956 | 3.959310e-56 | -8.615850e-47 |
| Msa0037330 | Msa1331300 | 0.831308 | 1.796491e-55 | -8.615850e-47 |
| Msa0092220 | Msa1331300 | 0.830970 | 2.175975e-55 | -8.615850e-47 |
| Msa0645620 | Msa1331300 | 0.807831 | 4.171319e-50 | -8.615850e-47 |
| Msa0683840 | Msa1331300 | 0.816704 | 4.821774e-52 | -8.615850e-47 |
| Msa0693340 | Msa1331300 | -0.826694 | 2.357419e-54 | -8.615850e-47 |
| Msa0703950 | Msa1331300 | 0.805387 | 1.368010e-49 | -8.615850e-47 |
| Msa0745140 | Msa1331300 | 0.814175 | 1.760880e-51 | -8.615850e-47 |
| Msa0754430 | Msa1331300 | 0.820544 | 6.483950e-53 | -8.615850e-47 |
| Msa0754450 | Msa1331300 | 0.803222 | 3.864610e-49 | -8.615850e-47 |
| Msa0776640 | Msa1331300 | 0.813104 | 3.030009e-51 | -8.615850e-47 |
| Msa0825920 | Msa1331300 | 0.805926 | 1.054513e-49 | -8.615850e-47 |
| Msa0124910 | Msa1331300 | 0.823951 | 1.050238e-53 | -8.615850e-47 |
| Msa0126160 | Msa1331300 | 0.807522 | 4.850827e-50 | -8.615850e-47 |
| Msa0129630 | Msa1331300 | 0.812133 | 4.941343e-51 | -8.615850e-47 |
| Msa0169410 | Msa1331300 | 0.816434 | 5.540653e-52 | -8.615850e-47 |
| Msa0177320 | Msa1331300 | 0.836655 | 8.240851e-57 | -8.615850e-47 |
| Msa0178050 | Msa1331300 | 0.829583 | 4.746656e-55 | -8.615850e-47 |
| Msa0209140 | Msa1331300 | 0.839258 | 1.764316e-57 | -8.615850e-47 |
| Msa0216340 | Msa1331300 | 0.836146 | 1.110489e-56 | -8.615850e-47 |
| Msa0218040 | Msa1331300 | 0.813230 | 2.843832e-51 | -8.615850e-47 |
| Msa0220990 | Msa1331300 | 0.823571 | 1.289054e-53 | -8.615850e-47 |
| Msa0224110 | Msa1331300 | 0.810879 | 9.256133e-51 | -8.615850e-47 |
| Msa0226450 | Msa1331300 | -0.808615 | 2.838390e-50 | -8.615850e-47 |
| Msa1257570 | Msa1331300 | 0.881862 | 1.686829e-70 | -8.615850e-47 |
| Msa1259730 | Msa1331300 | 0.863641 | 2.153208e-64 | -8.615850e-47 |
| Msa1265020 | Msa1331300 | 0.814925 | 1.201768e-51 | -8.615850e-47 |
| Msa1327870 | Msa1331300 | 0.842785 | 2.092203e-58 | -8.615850e-47 |
| Msa1331300 | Msa1337850 | 0.822920 | 1.829561e-53 | -8.615850e-47 |
| Msa1331300 | Msa1365820 | 0.822211 | 2.674004e-53 | -8.615850e-47 |
| Msa1331300 | Msa1368390 | 0.806768 | 7.007487e-50 | -8.615850e-47 |
| Msa1331300 | Msa1373170 | 0.850052 | 2.179156e-60 | -8.615850e-47 |
| Msa1331300 | Msa1375130 | 0.801585 | 8.398865e-49 | -8.615850e-47 |
| Msa1331300 | Msa1383820 | 0.814953 | 1.184745e-51 | -8.615850e-47 |
| Msa1331300 | Msa1411420 | 0.822098 | 2.840851e-53 | -8.615850e-47 |
| Msa1331300 | Msa1412420 | 0.813745 | 2.191370e-51 | -8.615850e-47 |
| Msa1331300 | Msa1427870 | 0.821659 | 3.590009e-53 | -8.615850e-47 |
| Msa1331300 | Msa1429070 | 0.803104 | 4.087321e-49 | -8.615850e-47 |
| Msa1331300 | Msa1433870 | 0.813153 | 2.955999e-51 | -8.615850e-47 |
| Msa1331300 | Msa1464090 | 0.804148 | 2.481989e-49 | -8.615850e-47 |
| Msa0374390 | Msa1331300 | 0.814374 | 1.591695e-51 | -8.615850e-47 |
| Msa0385310 | Msa1331300 | 0.806765 | 7.016079e-50 | -8.615850e-47 |
| Msa0396520 | Msa1331300 | 0.832441 | 9.438401e-56 | -8.615850e-47 |
| Msa0408380 | Msa1331300 | 0.804415 | 2.184237e-49 | -8.615850e-47 |
| Msa0414880 | Msa1331300 | 0.812554 | 3.999296e-51 | -8.615850e-47 |
| Msa0428210 | Msa1331300 | 0.841744 | 3.945798e-58 | -8.615850e-47 |
| Msa0430230 | Msa1331300 | 0.823002 | 1.750730e-53 | -8.615850e-47 |
| Msa0474570 | Msa1331300 | 0.820166 | 7.918314e-53 | -8.615850e-47 |
| Msa1002350 | Msa1331300 | 0.802316 | 5.944950e-49 | -8.615850e-47 |
| Msa1031390 | Msa1331300 | 0.815658 | 8.257230e-52 | -8.615850e-47 |
| Msa1045230 | Msa1331300 | 0.817452 | 3.274085e-52 | -8.615850e-47 |
| Msa1045280 | Msa1331300 | 0.817278 | 3.582747e-52 | -8.615850e-47 |
| Msa1070890 | Msa1331300 | 0.822043 | 2.926124e-53 | -8.615850e-47 |
| Msa1074900 | Msa1331300 | 0.841749 | 3.934495e-58 | -8.615850e-47 |
| Msa1078830 | Msa1331300 | 0.864359 | 1.287010e-64 | -8.615850e-47 |
| Msa1078890 | Msa1331300 | 0.863088 | 3.194158e-64 | -8.615850e-47 |
| Msa1078940 | Msa1331300 | 0.801795 | 7.605341e-49 | -8.615850e-47 |
| Msa1089220 | Msa1331300 | 0.811362 | 7.270910e-51 | -8.615850e-47 |
| Msa0256540 | Msa1331300 | 0.804559 | 2.038340e-49 | -8.615850e-47 |
| Msa0263780 | Msa1331300 | 0.827104 | 1.881043e-54 | -8.615850e-47 |
| Msa0265250 | Msa1331300 | 0.807722 | 4.398389e-50 | -8.615850e-47 |
| Msa0288620 | Msa1331300 | 0.834032 | 3.789726e-56 | -8.615850e-47 |
| Msa0300280 | Msa1331300 | 0.817459 | 3.262467e-52 | -8.615850e-47 |
| Msa0301520 | Msa1331300 | 0.824218 | 9.094410e-54 | -8.615850e-47 |
| Msa0326710 | Msa1331300 | 0.828853 | 7.137173e-55 | -8.615850e-47 |
| Msa0334320 | Msa1331300 | 0.810719 | 1.002061e-50 | -8.615850e-47 |
| Msa0339020 | Msa1331300 | 0.823472 | 1.359978e-53 | -8.615850e-47 |
| Msa0341060 | Msa1331300 | -0.821320 | 4.299181e-53 | -8.615850e-47 |
| Msa1165090 | Msa1331300 | 0.867078 | 1.783429e-65 | -8.615850e-47 |
| Msa1169220 | Msa1331300 | 0.845276 | 4.493392e-59 | -8.615850e-47 |
| Msa1169660 | Msa1331300 | 0.868107 | 8.346256e-66 | -8.615850e-47 |
| Msa1192180 | Msa1331300 | 0.831714 | 1.427427e-55 | -8.615850e-47 |
| Msa1196430 | Msa1331300 | 0.818274 | 2.134922e-52 | -8.615850e-47 |
| Msa1207330 | Msa1331300 | 0.958478 | 2.133000e-116 | -8.615850e-47 |
| Msa1216980 | Msa1331300 | 0.812753 | 3.618083e-51 | -8.615850e-47 |
| Msa0502510 | Msa1331300 | 0.801945 | 7.084590e-49 | -8.615850e-47 |
| Msa0508180 | Msa1331300 | 0.804425 | 2.173444e-49 | -8.615850e-47 |
| Msa0515520 | Msa1331300 | 0.820184 | 7.841345e-53 | -8.615850e-47 |
| Msa0515570 | Msa1331300 | 0.820065 | 8.350316e-53 | -8.615850e-47 |
| Msa0519150 | Msa1331300 | 0.835701 | 1.439366e-56 | -8.615850e-47 |
| Msa0523110 | Msa1331300 | 0.804530 | 2.067066e-49 | -8.615850e-47 |
| Msa0525880 | Msa1331300 | 0.841438 | 4.751317e-58 | -8.615850e-47 |
| Msa0572750 | Msa1331300 | 0.800164 | 1.638329e-48 | -8.615850e-47 |
| Msa0574900 | Msa1331300 | 0.809735 | 1.633573e-50 | -8.615850e-47 |
| Msa0850690 | Msa1331300 | 0.807337 | 5.309331e-50 | -8.615850e-47 |
| Msa0865420 | Msa1331300 | 0.829957 | 3.849541e-55 | -8.615850e-47 |
| Msa0931400 | Msa1331300 | 0.815110 | 1.093164e-51 | -8.615850e-47 |
| Msa0968360 | Msa1331300 | 0.817071 | 3.987124e-52 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1331300 | MtrunA17_Chr4g0056231 | 97.107 | 242 | 7 | 0 | 1 | 242 | 1 | 242 | 3.29e-176 | 483 |
| Msa1331300 | MtrunA17_Chr5g0399141 | 76.033 | 242 | 58 | 0 | 1 | 242 | 2 | 243 | 7.09e-136 | 382 |
| Msa1331300 | MtrunA17_Chr4g0012521 | 63.866 | 238 | 85 | 1 | 5 | 242 | 4 | 240 | 1.26e-114 | 328 |
| Msa1331300 | MtrunA17_Chr7g0230901 | 64.706 | 238 | 83 | 1 | 5 | 242 | 4 | 240 | 1.40e-112 | 323 |
| Msa1331300 | MtrunA17_Chr4g0012141 | 48.077 | 208 | 76 | 3 | 4 | 211 | 15 | 190 | 1.81e-58 | 184 |
| Msa1331300 | MtrunA17_Chr4g0012151 | 46.154 | 208 | 101 | 2 | 4 | 209 | 21 | 219 | 1.01e-54 | 176 |
| Msa1331300 | MtrunA17_Chr5g0399741 | 42.105 | 209 | 92 | 2 | 7 | 215 | 6 | 185 | 4.01e-51 | 166 |
| Msa1331300 | MtrunA17_Chr4g0055631 | 39.013 | 223 | 106 | 3 | 7 | 228 | 9 | 202 | 9.76e-51 | 165 |
| Msa1331300 | MtrunA17_Chr4g0066671 | 56.028 | 141 | 62 | 0 | 6 | 146 | 4 | 144 | 3.31e-50 | 166 |
| Msa1331300 | MtrunA17_Chr4g0012291 | 61.600 | 125 | 48 | 0 | 4 | 128 | 20 | 144 | 5.66e-49 | 161 |
| Msa1331300 | MtrunA17_Chr1g0191261 | 40.704 | 199 | 112 | 2 | 7 | 205 | 6 | 198 | 2.64e-43 | 151 |
| Msa1331300 | MtrunA17_Chr4g0012091 | 48.947 | 190 | 70 | 3 | 20 | 208 | 5 | 168 | 2.18e-41 | 140 |
| Msa1331300 | MtrunA17_Chr4g0012341 | 55.738 | 61 | 24 | 2 | 39 | 96 | 2 | 62 | 4.49e-15 | 68.2 |
| Msa1331300 | MtrunA17_Chr4g0012381 | 64.103 | 39 | 14 | 0 | 31 | 69 | 1 | 39 | 1.37e-12 | 60.8 |
| Msa1331300 | MtrunA17_Chr2g0323731 | 31.967 | 122 | 76 | 2 | 12 | 129 | 87 | 205 | 3.47e-11 | 61.6 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1331300 | AT2G45140.1 | 66.527 | 239 | 77 | 2 | 5 | 242 | 3 | 239 | 2.55e-108 | 312 |
| Msa1331300 | AT3G60600.1 | 63.750 | 240 | 84 | 2 | 4 | 242 | 19 | 256 | 3.79e-101 | 295 |
| Msa1331300 | AT2G45140.2 | 63.180 | 239 | 68 | 3 | 5 | 242 | 3 | 222 | 5.63e-99 | 288 |
| Msa1331300 | AT4G00170.1 | 59.833 | 239 | 90 | 4 | 5 | 241 | 4 | 238 | 2.90e-92 | 271 |
| Msa1331300 | AT3G60600.3 | 72.956 | 159 | 41 | 1 | 4 | 162 | 19 | 175 | 3.90e-83 | 248 |
| Msa1331300 | AT3G60600.2 | 67.797 | 177 | 49 | 2 | 4 | 180 | 19 | 187 | 2.18e-82 | 246 |
| Msa1331300 | AT4G00170.2 | 57.674 | 215 | 85 | 4 | 29 | 241 | 1 | 211 | 4.44e-77 | 232 |
| Msa1331300 | AT1G51270.13 | 63.158 | 152 | 56 | 0 | 6 | 157 | 4 | 155 | 5.62e-68 | 214 |
| Msa1331300 | AT1G51270.12 | 63.158 | 152 | 56 | 0 | 6 | 157 | 4 | 155 | 5.62e-68 | 214 |
| Msa1331300 | AT1G51270.14 | 63.158 | 152 | 56 | 0 | 6 | 157 | 4 | 155 | 5.62e-68 | 214 |
| Msa1331300 | AT1G51270.11 | 63.158 | 152 | 56 | 0 | 6 | 157 | 4 | 155 | 5.62e-68 | 214 |
| Msa1331300 | AT1G51270.5 | 63.057 | 157 | 57 | 1 | 1 | 157 | 1 | 156 | 7.90e-68 | 213 |
| Msa1331300 | AT1G51270.15 | 63.158 | 152 | 56 | 0 | 6 | 157 | 4 | 155 | 7.86e-67 | 214 |
| Msa1331300 | AT1G51270.8 | 63.158 | 152 | 56 | 0 | 6 | 157 | 175 | 326 | 1.10e-65 | 213 |
| Msa1331300 | AT1G51270.8 | 57.962 | 157 | 65 | 1 | 1 | 157 | 1 | 156 | 4.98e-59 | 195 |
| Msa1331300 | AT1G51270.2 | 63.158 | 152 | 56 | 0 | 6 | 157 | 175 | 326 | 1.10e-65 | 213 |
| Msa1331300 | AT1G51270.2 | 57.962 | 157 | 65 | 1 | 1 | 157 | 1 | 156 | 4.98e-59 | 195 |
| Msa1331300 | AT1G51270.1 | 63.158 | 152 | 56 | 0 | 6 | 157 | 175 | 326 | 2.52e-65 | 213 |
| Msa1331300 | AT1G51270.1 | 57.962 | 157 | 65 | 1 | 1 | 157 | 1 | 156 | 9.31e-59 | 195 |
| Msa1331300 | AT1G51270.9 | 63.158 | 152 | 56 | 0 | 6 | 157 | 127 | 278 | 3.12e-65 | 213 |
| Msa1331300 | AT1G51270.9 | 58.879 | 107 | 44 | 0 | 51 | 157 | 2 | 108 | 3.40e-38 | 140 |
| Msa1331300 | AT1G51270.6 | 63.158 | 152 | 56 | 0 | 6 | 157 | 127 | 278 | 3.12e-65 | 213 |
| Msa1331300 | AT1G51270.6 | 58.879 | 107 | 44 | 0 | 51 | 157 | 2 | 108 | 3.40e-38 | 140 |
| Msa1331300 | AT1G51270.7 | 63.158 | 152 | 56 | 0 | 6 | 157 | 127 | 278 | 3.12e-65 | 213 |
| Msa1331300 | AT1G51270.7 | 58.879 | 107 | 44 | 0 | 51 | 157 | 2 | 108 | 3.40e-38 | 140 |
| Msa1331300 | AT1G51270.10 | 63.158 | 152 | 56 | 0 | 6 | 157 | 127 | 278 | 3.12e-65 | 213 |
| Msa1331300 | AT1G51270.10 | 58.879 | 107 | 44 | 0 | 51 | 157 | 2 | 108 | 3.40e-38 | 140 |
| Msa1331300 | AT1G51270.3 | 63.158 | 152 | 56 | 0 | 6 | 157 | 175 | 326 | 7.44e-65 | 213 |
| Msa1331300 | AT1G51270.3 | 57.962 | 157 | 65 | 1 | 1 | 157 | 1 | 156 | 2.47e-58 | 195 |
| Msa1331300 | AT5G47180.1 | 41.909 | 241 | 107 | 5 | 4 | 242 | 6 | 215 | 5.21e-60 | 189 |
| Msa1331300 | AT5G47180.2 | 41.909 | 241 | 107 | 5 | 4 | 242 | 6 | 215 | 5.21e-60 | 189 |
| Msa1331300 | AT2G23830.1 | 65.323 | 124 | 43 | 0 | 4 | 127 | 3 | 126 | 1.48e-56 | 177 |
| Msa1331300 | AT1G08820.1 | 52.703 | 148 | 66 | 1 | 7 | 154 | 5 | 148 | 2.64e-44 | 153 |
| Msa1331300 | AT1G08820.5 | 52.703 | 148 | 66 | 1 | 7 | 154 | 5 | 148 | 2.64e-44 | 153 |
| Msa1331300 | AT1G08820.3 | 52.703 | 148 | 66 | 1 | 7 | 154 | 5 | 148 | 2.64e-44 | 153 |
| Msa1331300 | AT1G08820.4 | 52.703 | 148 | 66 | 1 | 7 | 154 | 5 | 148 | 2.64e-44 | 153 |
| Msa1331300 | AT1G08820.2 | 52.703 | 148 | 66 | 1 | 7 | 154 | 5 | 148 | 2.64e-44 | 153 |
| Msa1331300 | AT1G51270.4 | 63.953 | 86 | 31 | 0 | 72 | 157 | 1 | 86 | 3.36e-32 | 121 |
| Msa1331300 | AT4G05060.1 | 31.387 | 137 | 86 | 3 | 3 | 134 | 95 | 228 | 1.57e-12 | 66.2 |
| Msa1331300 | AT4G21450.1 | 31.496 | 127 | 79 | 3 | 8 | 129 | 108 | 231 | 1.75e-12 | 65.9 |
Find 95 sgRNAs with CRISPR-Local
Find 315 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| TACGCATAACTGAATATTAT+TGG | 0.214209 | 8_4:-50807440 | None:intergenic |
| AAAATGAAAATGAAAATAAT+TGG | 0.270647 | 8_4:+50811545 | None:intergenic |
| AAGATCTACCTGCGATGTTA+TGG | 0.307994 | 8_4:-50810912 | Msa1331300:CDS |
| TCAACGTGCGTTGAAACTTA+TGG | 0.308346 | 8_4:+50811686 | None:intergenic |
| GACCCTTCCTCAGAACCTTC+TGG | 0.314635 | 8_4:+50810496 | None:intergenic |
| TTTATAATTGTCATATTAAT+CGG | 0.319180 | 8_4:-50807951 | Msa1331300:CDS |
| ATATCCGCAGAGATATCTTT+TGG | 0.319733 | 8_4:+50810704 | None:intergenic |
| GGACCCACTTGTGCGAATTC+AGG | 0.322000 | 8_4:+50810430 | None:intergenic |
| TTTGGAAGTAGAAGACTTTA+GGG | 0.332022 | 8_4:-50807743 | Msa1331300:three_prime_UTR |
| AAATGAAAATAATTGGAGTT+AGG | 0.350096 | 8_4:+50811552 | None:intergenic |
| TGATGTGAAGAAGATGAAAT+TGG | 0.352283 | 8_4:+50811496 | None:intergenic |
| GAAAATTATCGTTACCTTGA+AGG | 0.356059 | 8_4:+50811221 | None:intergenic |
| CTTATCCTTGCATTGCATAT+CGG | 0.361379 | 8_4:+50810766 | None:intergenic |
| TGATAGCTATGTTGCCTTCA+AGG | 0.365195 | 8_4:-50811235 | Msa1331300:intron |
| AGTGAATCCTCACCAGTTCC+TGG | 0.373384 | 8_4:+50808338 | None:intergenic |
| GGGACGAACACAATACTTCC+TGG | 0.379716 | 8_4:+50810955 | None:intergenic |
| AAAGTTTGTCGTTTCTTTAG+TGG | 0.380597 | 8_4:-50807638 | Msa1331300:three_prime_UTR |
| AAAAGATATCTCTGCGGATA+TGG | 0.390900 | 8_4:-50810702 | Msa1331300:intron |
| GTCATATTAATCGGCTTACT+TGG | 0.400261 | 8_4:-50807942 | Msa1331300:CDS |
| GCCTGAGAGTTCCTGATTTG+TGG | 0.405067 | 8_4:+50807569 | None:intergenic |
| ATGTGAACTGACTCATGCTT+TGG | 0.409844 | 8_4:-50807693 | Msa1331300:three_prime_UTR |
| CGGCTTACTTGGCGTAATCA+TGG | 0.416267 | 8_4:-50807931 | Msa1331300:CDS |
| AATGAAAATAATTGGAGTTA+GGG | 0.423474 | 8_4:+50811553 | None:intergenic |
| TAGCAGGCTCCGCCAGGAAC+TGG | 0.424265 | 8_4:-50808350 | Msa1331300:intron |
| ACCCTTCCTCAGAACCTTCT+GGG | 0.431309 | 8_4:+50810497 | None:intergenic |
| TGGTTCTTTGAATTGGTTTG+TGG | 0.432157 | 8_4:+50807469 | None:intergenic |
| GGTCAAAACGACCACAAATC+AGG | 0.435077 | 8_4:-50807580 | Msa1331300:three_prime_UTR |
| AGGACTAGGATTTAATAAAC+TGG | 0.435469 | 8_4:+50811730 | None:intergenic |
| GGCAAGACAATTCCAGTGTT+GGG | 0.435557 | 8_4:+50810935 | None:intergenic |
| AGATCTACCTGCGATGTTAT+GGG | 0.436395 | 8_4:-50810911 | Msa1331300:intron |
| TCCTCAGAACCTTCTGGGAC+TGG | 0.457111 | 8_4:+50810502 | None:intergenic |
| ATGATTATGATTATGATGAC+AGG | 0.462311 | 8_4:+50811587 | None:intergenic |
| ATAACATCGCAGGTAGATCT+TGG | 0.463396 | 8_4:+50810914 | None:intergenic |
| TTTCAATGTGGTGGAGAAAG+TGG | 0.470634 | 8_4:+50811658 | None:intergenic |
| GGGACTGGAGATGGTGGTTG+CGG | 0.477331 | 8_4:+50810517 | None:intergenic |
| TAGATCAATTCTTCATGTGT+TGG | 0.478588 | 8_4:-50807809 | Msa1331300:three_prime_UTR |
| GGCTTACTTGGCGTAATCAT+GGG | 0.479720 | 8_4:-50807930 | Msa1331300:CDS |
| GCAGATTTGTCTTGAGCCAC+AGG | 0.481466 | 8_4:+50810299 | None:intergenic |
| TCCTTGCATTGCATATCGGC+TGG | 0.482696 | 8_4:+50810770 | None:intergenic |
| TGTGAACTGACTCATGCTTT+GGG | 0.483704 | 8_4:-50807692 | Msa1331300:three_prime_UTR |
| GCTTAGTTCAACAAGGAGGC+AGG | 0.499365 | 8_4:-50810586 | Msa1331300:intron |
| TGGCAAGACAATTCCAGTGT+TGG | 0.505017 | 8_4:+50810934 | None:intergenic |
| GAACCTTCTGGGACTGGAGA+TGG | 0.512445 | 8_4:+50810508 | None:intergenic |
| CATCTCTGAGTAATTGAAGC+AGG | 0.515251 | 8_4:+50811443 | None:intergenic |
| TTCATCTAGTGACTAGCATA+TGG | 0.515391 | 8_4:-50807615 | Msa1331300:three_prime_UTR |
| ATCAAACCGTGCAAATGCTT+AGG | 0.524296 | 8_4:+50807890 | None:intergenic |
| GGACGAACACAATACTTCCT+GGG | 0.526313 | 8_4:+50810956 | None:intergenic |
| CCTCACTGTTCAAGCAATTG+TGG | 0.529762 | 8_4:-50807843 | Msa1331300:three_prime_UTR |
| ATGCAATTCAACAAACTAGC+AGG | 0.535469 | 8_4:-50808366 | Msa1331300:CDS |
| ACAAACTAGCAGGCTCCGCC+AGG | 0.538008 | 8_4:-50808356 | Msa1331300:CDS |
| ACTGGAGATGGTGGTTGCGG+CGG | 0.540247 | 8_4:+50810520 | None:intergenic |
| AGGTGAAAACAACGAATCCC+AGG | 0.543965 | 8_4:-50810973 | Msa1331300:CDS |
| TATTGTGTTCGTCCCAACAC+TGG | 0.549323 | 8_4:-50810947 | Msa1331300:CDS |
| CGGGATTGCTTAGTTCAACA+AGG | 0.549410 | 8_4:-50810593 | Msa1331300:intron |
| GTCCCAGAAGGTTCTGAGGA+AGG | 0.549939 | 8_4:-50810499 | Msa1331300:CDS |
| AGCATATGGTAACATCAAGT+TGG | 0.550268 | 8_4:-50807601 | Msa1331300:three_prime_UTR |
| GGAGGCAGGACATGTGGTCG+AGG | 0.551010 | 8_4:-50810572 | Msa1331300:CDS |
| AAGACTTTAGGGGAAGTTGT+GGG | 0.551128 | 8_4:-50807732 | Msa1331300:three_prime_UTR |
| ACCACAAATCAGGAACTCTC+AGG | 0.553940 | 8_4:-50807570 | Msa1331300:three_prime_UTR |
| GTTCGAGAGGTTCGATGCTG+AGG | 0.558096 | 8_4:+50811403 | None:intergenic |
| TCCCAGAAGGTTCTGAGGAA+GGG | 0.560679 | 8_4:-50810498 | Msa1331300:CDS |
| GAAGACTTTAGGGGAAGTTG+TGG | 0.564706 | 8_4:-50807733 | Msa1331300:three_prime_UTR |
| CAGGGGAACTTGAGTTCGAG+AGG | 0.576125 | 8_4:+50811390 | None:intergenic |
| TGATTATGATTATGATGACA+GGG | 0.578069 | 8_4:+50811588 | None:intergenic |
| CCTTCTGGGACTGGAGATGG+TGG | 0.580395 | 8_4:+50810511 | None:intergenic |
| AATAAAATACAGACATGGAA+AGG | 0.580530 | 8_4:+50811710 | None:intergenic |
| GATGCTGAGGAGATCACCAT+CGG | 0.583008 | 8_4:+50811416 | None:intergenic |
| TCCAGCCGATATGCAATGCA+AGG | 0.588712 | 8_4:-50810771 | Msa1331300:CDS |
| TTGTGCGAATTCAGGACCAC+TGG | 0.590490 | 8_4:+50810438 | None:intergenic |
| TCTTTGAATTTGGCAAGTAG+CGG | 0.591657 | 8_4:-50807522 | Msa1331300:three_prime_UTR |
| GGGATATTTCAGGTAACAAG+AGG | 0.592637 | 8_4:-50810335 | Msa1331300:intron |
| ATCCGTACCCATAACATCGC+AGG | 0.597634 | 8_4:+50810904 | None:intergenic |
| AGGCAAGAGCTCTTATCTCA+AGG | 0.599068 | 8_4:-50808408 | Msa1331300:CDS |
| AGGATCTGCTGAACGACCTG+TGG | 0.602071 | 8_4:-50810315 | Msa1331300:CDS |
| ATGCTGAGGAGATCACCATC+GGG | 0.602500 | 8_4:+50811417 | None:intergenic |
| AGAAGACCTAAGCATTTGCA+CGG | 0.606810 | 8_4:-50807896 | Msa1331300:exon |
| TCAGAAAATGGAAATGCCAG+TGG | 0.609259 | 8_4:-50810454 | Msa1331300:CDS |
| ATACAGACATGGAAAGGACT+AGG | 0.614018 | 8_4:+50811716 | None:intergenic |
| TAGGAGCTGCTGAAGCGTGA+AGG | 0.615403 | 8_4:-50807999 | Msa1331300:CDS |
| TCCAGTCCCAGAAGGTTCTG+AGG | 0.617607 | 8_4:-50810503 | Msa1331300:CDS |
| TGTGAAGAAGATGAAATTGG+AGG | 0.628989 | 8_4:+50811499 | None:intergenic |
| GTGAAGAAGATGAAATTGGA+GGG | 0.629834 | 8_4:+50811500 | None:intergenic |
| CAACAAGGAGGCAGGACATG+TGG | 0.633592 | 8_4:-50810578 | Msa1331300:CDS |
| CCACCATCTCCAGTCCCAGA+AGG | 0.633985 | 8_4:-50810511 | Msa1331300:CDS |
| TACTCAGAGATGAGTCCCGA+TGG | 0.636351 | 8_4:-50811432 | Msa1331300:exon |
| GCTTACTTGGCGTAATCATG+GGG | 0.641142 | 8_4:-50807929 | Msa1331300:CDS |
| GGCTCAAGACAAATCTGCAG+AGG | 0.648897 | 8_4:-50810294 | Msa1331300:intron |
| GAGGAAGGGTCATCCCCTAG+AGG | 0.683330 | 8_4:-50810484 | Msa1331300:CDS |
| CGAGGAGTGCAAATTGAGAG+TGG | 0.686274 | 8_4:-50810554 | Msa1331300:CDS |
| CCACAATTGCTTGAACAGTG+AGG | 0.691088 | 8_4:+50807843 | None:intergenic |
| TTGGAAGTAGAAGACTTTAG+GGG | 0.697129 | 8_4:-50807742 | Msa1331300:three_prime_UTR |
| GAATCCTCACCAGTTCCTGG+CGG | 0.725681 | 8_4:+50808341 | None:intergenic |
| ATGGAAATAAAATACAGACA+TGG | 0.726506 | 8_4:+50811705 | None:intergenic |
| GATTGCTTAGTTCAACAAGG+AGG | 0.758050 | 8_4:-50810590 | Msa1331300:intron |
| CAGTCCAAAAGATATCTCTG+CGG | 0.763749 | 8_4:-50810708 | Msa1331300:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | AAAATGAAAATGAAAATAAT+TGG | + | chr8_4:50807647-50807666 | None:intergenic | 10.0% |
| !! | TTTATAATTGTCATATTAAT+CGG | - | chr8_4:50811238-50811257 | Msa1331300:CDS | 10.0% |
| !!! | ATTGTATTTTGATTTTGTTT+AGG | - | chr8_4:50808196-50808215 | Msa1331300:intron | 15.0% |
| !! | ATTTAATTATAACAGAACAT+TGG | - | chr8_4:50809059-50809078 | Msa1331300:intron | 15.0% |
| !! | TTTAATTATAACAGAACATT+GGG | - | chr8_4:50809060-50809079 | Msa1331300:intron | 15.0% |
| !!! | TTTTATTTTCAATCTACAAA+AGG | - | chr8_4:50810289-50810308 | Msa1331300:intron | 15.0% |
| !!! | TCTTTTTTCTTTTCTTCTTT+TGG | + | chr8_4:50807566-50807585 | None:intergenic | 20.0% |
| !! | AATGAAAATAATTGGAGTTA+GGG | + | chr8_4:50807639-50807658 | None:intergenic | 20.0% |
| !! | AAATGAAAATAATTGGAGTT+AGG | + | chr8_4:50807640-50807659 | None:intergenic | 20.0% |
| !! | AGATATTCTTGTATGAAAAA+AGG | + | chr8_4:50808813-50808832 | None:intergenic | 20.0% |
| !! | TTAATTATAACAGAACATTG+GGG | - | chr8_4:50809061-50809080 | Msa1331300:intron | 20.0% |
| !! | ATTTAGTTGTGATAATTAGT+AGG | - | chr8_4:50809346-50809365 | Msa1331300:intron | 20.0% |
| !! | TTTAGTTGTGATAATTAGTA+GGG | - | chr8_4:50809347-50809366 | Msa1331300:intron | 20.0% |
| !!! | ACTTAATGTAAGGATATTTT+AGG | - | chr8_4:50809745-50809764 | Msa1331300:intron | 20.0% |
| !!! | TTTTAAAACACTCCAATATT+GGG | + | chr8_4:50809818-50809837 | None:intergenic | 20.0% |
| !!! | GAGTGTTTTAAAACTTATTA+AGG | - | chr8_4:50809825-50809844 | Msa1331300:intron | 20.0% |
| !! | CAACAAACAGTTATATAAAT+TGG | + | chr8_4:50810066-50810085 | None:intergenic | 20.0% |
| !! | CAATTTATATAACTGTTTGT+TGG | - | chr8_4:50810064-50810083 | Msa1331300:intron | 20.0% |
| !! | TAAAATTCATATTTGGAAGT+TGG | + | chr8_4:50810266-50810285 | None:intergenic | 20.0% |
| !! | ATGTAATGTAAATATTACGA+AGG | + | chr8_4:50810425-50810444 | None:intergenic | 20.0% |
| !! | TACATTCTATTAAAATAGTG+AGG | - | chr8_4:50810440-50810459 | Msa1331300:CDS | 20.0% |
| !!! | AACATGTGAGTTTTTAAAAT+TGG | + | chr8_4:50810491-50810510 | None:intergenic | 20.0% |
| !! | TTTAAAAACTCACATGTTAA+AGG | - | chr8_4:50810493-50810512 | Msa1331300:CDS | 20.0% |
| !! | GAAAAGCTTAAATATGTATT+GGG | + | chr8_4:50810520-50810539 | None:intergenic | 20.0% |
| !! | TGAAAAGCTTAAATATGTAT+TGG | + | chr8_4:50810521-50810540 | None:intergenic | 20.0% |
| !!! | TATGTATTGCTACTATTTTA+TGG | - | chr8_4:50811022-50811041 | Msa1331300:intron | 20.0% |
| !! | TGAATGAATTTATTACTTGT+AGG | - | chr8_4:50811171-50811190 | Msa1331300:intron | 20.0% |
| !!! | TTTATTTTCCCTTGTATTTT+TGG | - | chr8_4:50811412-50811431 | Msa1331300:CDS | 20.0% |
| !!! | TTATTTTCCCTTGTATTTTT+GGG | - | chr8_4:50811413-50811432 | Msa1331300:CDS | 20.0% |
| ! | AATAAAATACAGACATGGAA+AGG | + | chr8_4:50807482-50807501 | None:intergenic | 25.0% |
| ! | ATGGAAATAAAATACAGACA+TGG | + | chr8_4:50807487-50807506 | None:intergenic | 25.0% |
| !!! | TTTTCTATTTTTCAATGTGG+TGG | + | chr8_4:50807543-50807562 | None:intergenic | 25.0% |
| !!! | TGGTTTTCTATTTTTCAATG+TGG | + | chr8_4:50807546-50807565 | None:intergenic | 25.0% |
| ! | TGATTATGATTATGATGACA+GGG | + | chr8_4:50807604-50807623 | None:intergenic | 25.0% |
| ! | ATGATTATGATTATGATGAC+AGG | + | chr8_4:50807605-50807624 | None:intergenic | 25.0% |
| ! | TTGAAAATGCAAAATTTGAG+TGG | - | chr8_4:50808168-50808187 | Msa1331300:intron | 25.0% |
| ! | TAAACACAAGTGAAAAGAAA+CGG | + | chr8_4:50808332-50808351 | None:intergenic | 25.0% |
| ! | ATTCTTGTATGAAAAAAGGT+AGG | + | chr8_4:50808809-50808828 | None:intergenic | 25.0% |
| ! | CTTACTCTTAAGTAACTAAA+AGG | + | chr8_4:50809115-50809134 | None:intergenic | 25.0% |
| ! | AATTAAAATGAGATGAGAGT+GGG | - | chr8_4:50809189-50809208 | Msa1331300:intron | 25.0% |
| !! | AACAGAAATAAAAAGAGCAT+TGG | - | chr8_4:50809291-50809310 | Msa1331300:intron | 25.0% |
| !!! | ATTGGTTTTCTCAAATACTA+AGG | - | chr8_4:50809309-50809328 | Msa1331300:intron | 25.0% |
| !!! | TTGGTTTTCTCAAATACTAA+GGG | - | chr8_4:50809310-50809329 | Msa1331300:intron | 25.0% |
| ! | AATTTGTGACACTTAATGTA+AGG | - | chr8_4:50809735-50809754 | Msa1331300:intron | 25.0% |
| ! | ATGTGTTTATAAAATCCTAG+AGG | + | chr8_4:50809776-50809795 | None:intergenic | 25.0% |
| !! | TTTAAAACACTCCAATATTG+GGG | + | chr8_4:50809817-50809836 | None:intergenic | 25.0% |
| !!! | GTTTTAAAACACTCCAATAT+TGG | + | chr8_4:50809819-50809838 | None:intergenic | 25.0% |
| !!! | TTTTGTTCAATTTCTAGGAA+TGG | + | chr8_4:50809868-50809887 | None:intergenic | 25.0% |
| !!! | AGTTGTTTTGTTCAATTTCT+AGG | + | chr8_4:50809873-50809892 | None:intergenic | 25.0% |
| !!! | CTATTTTTTTCTCATGCTAT+GGG | + | chr8_4:50810238-50810257 | None:intergenic | 25.0% |
| !!! | ACTATTTTTTTCTCATGCTA+TGG | + | chr8_4:50810239-50810258 | None:intergenic | 25.0% |
| ! | ACTCAGACTTAATTTCAAAT+TGG | - | chr8_4:50810463-50810482 | Msa1331300:CDS | 25.0% |
| ! | CTCAGACTTAATTTCAAATT+GGG | - | chr8_4:50810464-50810483 | Msa1331300:CDS | 25.0% |
| ! | TATTTATGACTTAACGATCA+TGG | - | chr8_4:50810609-50810628 | Msa1331300:intron | 25.0% |
| !!! | ATTACTGACTCTAAAATTAC+AGG | + | chr8_4:50810723-50810742 | None:intergenic | 25.0% |
| !! | GTTTTTGATAGAAAAGTCTA+TGG | - | chr8_4:50810959-50810978 | Msa1331300:CDS | 25.0% |
| !! | TATTGCTACTATTTTATGGA+GGG | - | chr8_4:50811026-50811045 | Msa1331300:intron | 25.0% |
| ! | ATGTTGAAAGAATCATTTGA+TGG | + | chr8_4:50811123-50811142 | None:intergenic | 25.0% |
| ! | GATTCTTTCAACATTAGTTA+TGG | - | chr8_4:50811129-50811148 | Msa1331300:intron | 25.0% |
| ! | AGGAACAAAGTAAAAATCTA+TGG | + | chr8_4:50811329-50811348 | None:intergenic | 25.0% |
| !! | CATTCTTTTTGTAACTTAAG+AGG | - | chr8_4:50811527-50811546 | Msa1331300:five_prime_UTR | 25.0% |
| !!! | ACCTTTTTTGTCTTTGAATT+TGG | - | chr8_4:50811657-50811676 | Msa1331300:five_prime_UTR | 25.0% |
| !!! | GGTTTTTATTTGGATCAATT+TGG | + | chr8_4:50811702-50811721 | None:intergenic | 25.0% |
| !!! | ATTGGTTTGTGGTTTTTATT+TGG | + | chr8_4:50811712-50811731 | None:intergenic | 25.0% |
| !!! | AGTTTTATGGTTCTTTGAAT+TGG | + | chr8_4:50811730-50811749 | None:intergenic | 25.0% |
| AGGACTAGGATTTAATAAAC+TGG | + | chr8_4:50807462-50807481 | None:intergenic | 30.0% | |
| TGATGTGAAGAAGATGAAAT+TGG | + | chr8_4:50807696-50807715 | None:intergenic | 30.0% | |
| AAAGGAAATGGAAACTTACA+GGG | + | chr8_4:50807820-50807839 | None:intergenic | 30.0% | |
| GAAAAATGGAAAGAGATCAA+AGG | + | chr8_4:50807838-50807857 | None:intergenic | 30.0% | |
| !! | TGATCTCTTTCCATTTTTCT+AGG | - | chr8_4:50807839-50807858 | Msa1331300:three_prime_UTR | 30.0% |
| !! | GATCTCTTTCCATTTTTCTA+GGG | - | chr8_4:50807840-50807859 | Msa1331300:three_prime_UTR | 30.0% |
| GAAAATTATCGTTACCTTGA+AGG | + | chr8_4:50807971-50807990 | None:intergenic | 30.0% | |
| ACATTGCGAAAAAACTAACA+GGG | + | chr8_4:50808114-50808133 | None:intergenic | 30.0% | |
| AACATTGCGAAAAAACTAAC+AGG | + | chr8_4:50808115-50808134 | None:intergenic | 30.0% | |
| !!! | TGTTAGTTTTTTCGCAATGT+TGG | - | chr8_4:50808114-50808133 | Msa1331300:intron | 30.0% |
| AAAATGACGAAAATCATTCG+TGG | + | chr8_4:50808144-50808163 | None:intergenic | 30.0% | |
| ! | TTTCTGAAAAAGAACCTCTA+GGG | + | chr8_4:50808722-50808741 | None:intergenic | 30.0% |
| !! | TTTTCTGAAAAAGAACCTCT+AGG | + | chr8_4:50808723-50808742 | None:intergenic | 30.0% |
| !!! | AGAGGTTCTTTTTCAGAAAA+TGG | - | chr8_4:50808723-50808742 | Msa1331300:intron | 30.0% |
| AACTAAAACAGGACAAGTTA+AGG | + | chr8_4:50808783-50808802 | None:intergenic | 30.0% | |
| !!! | ATTGAGATGCTTTTTCTTCT+TGG | - | chr8_4:50808833-50808852 | Msa1331300:intron | 30.0% |
| !!! | TTGAGATGCTTTTTCTTCTT+GGG | - | chr8_4:50808834-50808853 | Msa1331300:intron | 30.0% |
| ! | TTTTCTTCTTGGGATATTTC+AGG | - | chr8_4:50808844-50808863 | Msa1331300:intron | 30.0% |
| AGAATTCAATGAGTTCAACT+GGG | + | chr8_4:50808985-50809004 | None:intergenic | 30.0% | |
| ! | TTACGCTCATGAATTTTTGT+AGG | - | chr8_4:50809023-50809042 | Msa1331300:intron | 30.0% |
| AAGACAGTTGCAAAGTATAA+CGG | - | chr8_4:50809132-50809151 | Msa1331300:intron | 30.0% | |
| ACAACTAATCAACTGTTAGT+TGG | - | chr8_4:50809156-50809175 | Msa1331300:intron | 30.0% | |
| GAATTAAAATGAGATGAGAG+TGG | - | chr8_4:50809188-50809207 | Msa1331300:intron | 30.0% | |
| ATTAAAATGAGATGAGAGTG+GGG | - | chr8_4:50809190-50809209 | Msa1331300:intron | 30.0% | |
| TCATATATCATGGGTATGTT+TGG | - | chr8_4:50809443-50809462 | Msa1331300:intron | 30.0% | |
| GAACCAAACATACCATATAA+GGG | + | chr8_4:50809612-50809631 | None:intergenic | 30.0% | |
| TGAACCAAACATACCATATA+AGG | + | chr8_4:50809613-50809632 | None:intergenic | 30.0% | |
| TTAAAACACTCCAATATTGG+GGG | + | chr8_4:50809816-50809835 | None:intergenic | 30.0% | |
| ! | AAAAATATCAAGGCATCTAG+GGG | + | chr8_4:50810327-50810346 | None:intergenic | 30.0% |
| ! | CAAAAATATCAAGGCATCTA+GGG | + | chr8_4:50810328-50810347 | None:intergenic | 30.0% |
| ! | AAAGCTGATGGATAATTTCA+TGG | - | chr8_4:50810558-50810577 | Msa1331300:CDS | 30.0% |
| TCATGGTTTAAATATCCACA+AGG | - | chr8_4:50810575-50810594 | Msa1331300:CDS | 30.0% | |
| CATGGTTTAAATATCCACAA+GGG | - | chr8_4:50810576-50810595 | Msa1331300:CDS | 30.0% | |
| AATAAAGTAAACAACCCTTG+TGG | + | chr8_4:50810593-50810612 | None:intergenic | 30.0% | |
| ! | TGGTATTTGGAAAAGCATAA+CGG | - | chr8_4:50810629-50810648 | Msa1331300:intron | 30.0% |
| AGAAAAGGGAGAAATAATTG+TGG | - | chr8_4:50810653-50810672 | Msa1331300:intron | 30.0% | |
| ! | GTGGTTATCTGTTTTCTTTT+TGG | - | chr8_4:50810672-50810691 | Msa1331300:intron | 30.0% |
| ! | ATGGATTTTCAGTCTGAATA+GGG | - | chr8_4:50810927-50810946 | Msa1331300:CDS | 30.0% |
| ! | GTATTGCTACTATTTTATGG+AGG | - | chr8_4:50811025-50811044 | Msa1331300:intron | 30.0% |
| ! | ATTGCTACTATTTTATGGAG+GGG | - | chr8_4:50811027-50811046 | Msa1331300:intron | 30.0% |
| !! | TCTGCCATTTGTTTTCTATT+AGG | - | chr8_4:50811068-50811087 | Msa1331300:intron | 30.0% |
| !! | CTGCCATTTGTTTTCTATTA+GGG | - | chr8_4:50811069-50811088 | Msa1331300:intron | 30.0% |
| !! | TGCCATTTGTTTTCTATTAG+GGG | - | chr8_4:50811070-50811089 | Msa1331300:intron | 30.0% |
| TAGATCAATTCTTCATGTGT+TGG | - | chr8_4:50811380-50811399 | Msa1331300:intron | 30.0% | |
| TTATCCACCCAAAAATACAA+GGG | + | chr8_4:50811423-50811442 | None:intergenic | 30.0% | |
| !!! | TTTTTGGGTGGATAACATTT+TGG | - | chr8_4:50811428-50811447 | Msa1331300:exon | 30.0% |
| !! | TTTTGGAAGTAGAAGACTTT+AGG | - | chr8_4:50811445-50811464 | Msa1331300:exon | 30.0% |
| TTTGGAAGTAGAAGACTTTA+GGG | - | chr8_4:50811446-50811465 | Msa1331300:five_prime_UTR | 30.0% | |
| ! | AAAGTTTGTCGTTTCTTTAG+TGG | - | chr8_4:50811551-50811570 | Msa1331300:five_prime_UTR | 30.0% |
| GCCAAATTCAAAGACAAAAA+AGG | + | chr8_4:50811661-50811680 | None:intergenic | 30.0% | |
| !! | TTCAGTTATGCGTAGTTTTA+TGG | + | chr8_4:50811743-50811762 | None:intergenic | 30.0% |
| GTGAAGAAGATGAAATTGGA+GGG | + | chr8_4:50807692-50807711 | None:intergenic | 35.0% | |
| TGTGAAGAAGATGAAATTGG+AGG | + | chr8_4:50807693-50807712 | None:intergenic | 35.0% | |
| AAGGAAATGGAAACTTACAG+GGG | + | chr8_4:50807819-50807838 | None:intergenic | 35.0% | |
| CAAAGGAAATGGAAACTTAC+AGG | + | chr8_4:50807821-50807840 | None:intergenic | 35.0% | |
| TGGAAAGAGATCAAAGGAAA+TGG | + | chr8_4:50807832-50807851 | None:intergenic | 35.0% | |
| ! | CGTTTGAAACCCTAGAAAAA+TGG | + | chr8_4:50807852-50807871 | None:intergenic | 35.0% |
| ATTGCGAAAAAACTAACAGG+GGG | + | chr8_4:50808112-50808131 | None:intergenic | 35.0% | |
| CATTGCGAAAAAACTAACAG+GGG | + | chr8_4:50808113-50808132 | None:intergenic | 35.0% | |
| CTTATCCTTGCATTGCATAT+CGG | + | chr8_4:50808426-50808445 | None:intergenic | 35.0% | |
| ! | ATATCCGCAGAGATATCTTT+TGG | + | chr8_4:50808488-50808507 | None:intergenic | 35.0% |
| AAAAGATATCTCTGCGGATA+TGG | - | chr8_4:50808487-50808506 | Msa1331300:intron | 35.0% | |
| ! | GTTACAAGATTTGTGCCATT+CGG | - | chr8_4:50808576-50808595 | Msa1331300:intron | 35.0% |
| ! | TTACAAGATTTGTGCCATTC+GGG | - | chr8_4:50808577-50808596 | Msa1331300:intron | 35.0% |
| ! | TTCTGAAAAAGAACCTCTAG+GGG | + | chr8_4:50808721-50808740 | None:intergenic | 35.0% |
| AAGGTAGGTTCAACTAAAAC+AGG | + | chr8_4:50808794-50808813 | None:intergenic | 35.0% | |
| GAATTCAATGAGTTCAACTG+GGG | + | chr8_4:50808984-50809003 | None:intergenic | 35.0% | |
| CAGAATTCAATGAGTTCAAC+TGG | + | chr8_4:50808986-50809005 | None:intergenic | 35.0% | |
| TCTTAAGTAACTAAAAGGCC+TGG | + | chr8_4:50809110-50809129 | None:intergenic | 35.0% | |
| TAATCAACTGTTAGTTGGCA+TGG | - | chr8_4:50809161-50809180 | Msa1331300:intron | 35.0% | |
| TCATTGTTGTAGAGTAGTAC+TGG | - | chr8_4:50809233-50809252 | Msa1331300:intron | 35.0% | |
| !! | TTATTTCTGTTCCCTACGAA+CGG | + | chr8_4:50809282-50809301 | None:intergenic | 35.0% |
| GAAGAGAATTAAAAGACGAC+CGG | - | chr8_4:50809369-50809388 | Msa1331300:intron | 35.0% | |
| AAGAGAATTAAAAGACGACC+GGG | - | chr8_4:50809370-50809389 | Msa1331300:intron | 35.0% | |
| ATATCATGGGTATGTTTGGA+TGG | - | chr8_4:50809447-50809466 | Msa1331300:intron | 35.0% | |
| !! | TTTGGATGGAGAGTTTTGTA+GGG | - | chr8_4:50809461-50809480 | Msa1331300:intron | 35.0% |
| ! | GTAGGGCTAAGTCTATATTT+TGG | - | chr8_4:50809478-50809497 | Msa1331300:intron | 35.0% |
| !!! | ATGGAGGATTTTTTAGAGGA+GGG | + | chr8_4:50809580-50809599 | None:intergenic | 35.0% |
| !!! | TAGGATGGAGGATTTTTTAG+AGG | + | chr8_4:50809584-50809603 | None:intergenic | 35.0% |
| AAACATACCATATAAGGGTG+TGG | + | chr8_4:50809607-50809626 | None:intergenic | 35.0% | |
| ACACCCTTATATGGTATGTT+TGG | - | chr8_4:50809606-50809625 | Msa1331300:intron | 35.0% | |
| ! | TGGTATGTTTGGTTCAAACA+AGG | - | chr8_4:50809617-50809636 | Msa1331300:intron | 35.0% |
| ! | GGTATGTTTGGTTCAAACAA+GGG | - | chr8_4:50809618-50809637 | Msa1331300:intron | 35.0% |
| ! | GTATGTTTGGTTCAAACAAG+GGG | - | chr8_4:50809619-50809638 | Msa1331300:intron | 35.0% |
| ! | ATGAAATGAGGTATCCTGTT+TGG | - | chr8_4:50809654-50809673 | Msa1331300:intron | 35.0% |
| !! | ATATTTTAGGCAATGCCTCT+AGG | - | chr8_4:50809758-50809777 | Msa1331300:intron | 35.0% |
| ! | TGTTCAATTTCTAGGAATGG+AGG | + | chr8_4:50809865-50809884 | None:intergenic | 35.0% |
| ACATAAGAGTCTGTTTGGTT+GGG | + | chr8_4:50809933-50809952 | None:intergenic | 35.0% | |
| AACATAAGAGTCTGTTTGGT+TGG | + | chr8_4:50809934-50809953 | None:intergenic | 35.0% | |
| CTCATACAAGTTTACAGTTG+CGG | - | chr8_4:50810189-50810208 | Msa1331300:intron | 35.0% | |
| ! | GCAAAAATATCAAGGCATCT+AGG | + | chr8_4:50810329-50810348 | None:intergenic | 35.0% |
| GACTTAACGATCATGGTATT+TGG | - | chr8_4:50810616-50810635 | Msa1331300:intron | 35.0% | |
| ! | AAAAGCATAACGGCAGAAAA+GGG | - | chr8_4:50810639-50810658 | Msa1331300:intron | 35.0% |
| !!! | TTCTAGTGCTGTCGTTTTTA+TGG | - | chr8_4:50810695-50810714 | Msa1331300:intron | 35.0% |
| ! | GACTATAGTTGCTTTGTTAC+AGG | - | chr8_4:50810761-50810780 | Msa1331300:CDS | 35.0% |
| ATGCAATTCAACAAACTAGC+AGG | - | chr8_4:50810823-50810842 | Msa1331300:intron | 35.0% | |
| ! | CATGGATTTTCAGTCTGAAT+AGG | - | chr8_4:50810926-50810945 | Msa1331300:CDS | 35.0% |
| CTCCCCTAATAGAAAACAAA+TGG | + | chr8_4:50811075-50811094 | None:intergenic | 35.0% | |
| TGTAGCAGAAATTAGAGTAC+AGG | + | chr8_4:50811099-50811118 | None:intergenic | 35.0% | |
| ! | GTCATATTAATCGGCTTACT+TGG | - | chr8_4:50811247-50811266 | Msa1331300:CDS | 35.0% |
| !!! | TTTTCCCTTGTATTTTTGGG+TGG | - | chr8_4:50811416-50811435 | Msa1331300:CDS | 35.0% |
| GTTATCCACCCAAAAATACA+AGG | + | chr8_4:50811424-50811443 | None:intergenic | 35.0% | |
| TTGGAAGTAGAAGACTTTAG+GGG | - | chr8_4:50811447-50811466 | Msa1331300:five_prime_UTR | 35.0% | |
| TTCATCTAGTGACTAGCATA+TGG | - | chr8_4:50811574-50811593 | Msa1331300:five_prime_UTR | 35.0% | |
| AGCATATGGTAACATCAAGT+TGG | - | chr8_4:50811588-50811607 | Msa1331300:five_prime_UTR | 35.0% | |
| TCTTTGAATTTGGCAAGTAG+CGG | - | chr8_4:50811667-50811686 | Msa1331300:five_prime_UTR | 35.0% | |
| !! | TGGTTCTTTGAATTGGTTTG+TGG | + | chr8_4:50811723-50811742 | None:intergenic | 35.0% |
| ATACAGACATGGAAAGGACT+AGG | + | chr8_4:50807476-50807495 | None:intergenic | 40.0% | |
| TCAACGTGCGTTGAAACTTA+TGG | + | chr8_4:50807506-50807525 | None:intergenic | 40.0% | |
| ! | TTTCAATGTGGTGGAGAAAG+TGG | + | chr8_4:50807534-50807553 | None:intergenic | 40.0% |
| CATCTCTGAGTAATTGAAGC+AGG | + | chr8_4:50807749-50807768 | None:intergenic | 40.0% | |
| TGATAGCTATGTTGCCTTCA+AGG | - | chr8_4:50807954-50807973 | Msa1331300:CDS | 40.0% | |
| ATAACATCGCAGGTAGATCT+TGG | + | chr8_4:50808278-50808297 | None:intergenic | 40.0% | |
| AAGATCTACCTGCGATGTTA+TGG | - | chr8_4:50808277-50808296 | Msa1331300:intron | 40.0% | |
| AGATCTACCTGCGATGTTAT+GGG | - | chr8_4:50808278-50808297 | Msa1331300:intron | 40.0% | |
| CAGTCCAAAAGATATCTCTG+CGG | - | chr8_4:50808481-50808500 | Msa1331300:intron | 40.0% | |
| GGTATGATTATCACGCTAGT+TGG | - | chr8_4:50808508-50808527 | Msa1331300:intron | 40.0% | |
| TTGAACTAAGCAATCCCGAA+TGG | + | chr8_4:50808594-50808613 | None:intergenic | 40.0% | |
| GATTGCTTAGTTCAACAAGG+AGG | - | chr8_4:50808599-50808618 | Msa1331300:intron | 40.0% | |
| TCAGAAAATGGAAATGCCAG+TGG | - | chr8_4:50808735-50808754 | Msa1331300:intron | 40.0% | |
| ! | GGGATATTTCAGGTAACAAG+AGG | - | chr8_4:50808854-50808873 | Msa1331300:intron | 40.0% |
| GAACATTGGGGAGAGATATA+AGG | - | chr8_4:50809073-50809092 | Msa1331300:intron | 40.0% | |
| AGAGAATTAAAAGACGACCG+GGG | - | chr8_4:50809371-50809390 | Msa1331300:intron | 40.0% | |
| TACCGCTCTCTCATATATCA+TGG | - | chr8_4:50809433-50809452 | Msa1331300:intron | 40.0% | |
| ACCGCTCTCTCATATATCAT+GGG | - | chr8_4:50809434-50809453 | Msa1331300:intron | 40.0% | |
| ACCCATGATATATGAGAGAG+CGG | + | chr8_4:50809438-50809457 | None:intergenic | 40.0% | |
| !! | GTTTGGATGGAGAGTTTTGT+AGG | - | chr8_4:50809460-50809479 | Msa1331300:intron | 40.0% |
| !!! | GATGGAGGATTTTTTAGAGG+AGG | + | chr8_4:50809581-50809600 | None:intergenic | 40.0% |
| ! | ATACCATATAAGGGTGTGGT+AGG | + | chr8_4:50809603-50809622 | None:intergenic | 40.0% |
| ! | AAATGAGGTATCCTGTTTGG+TGG | - | chr8_4:50809657-50809676 | Msa1331300:intron | 40.0% |
| CTCTTCAAATCCCCCAATAT+TGG | - | chr8_4:50809803-50809822 | Msa1331300:intron | 40.0% | |
| ATAAGAGTCTGTTTGGTTGG+GGG | + | chr8_4:50809931-50809950 | None:intergenic | 40.0% | |
| CATAAGAGTCTGTTTGGTTG+GGG | + | chr8_4:50809932-50809951 | None:intergenic | 40.0% | |
| GGCTAACATAAGAGTCTGTT+TGG | + | chr8_4:50809938-50809957 | None:intergenic | 40.0% | |
| ATTATGGGATCATGGATCGA+AGG | + | chr8_4:50809977-50809996 | None:intergenic | 40.0% | |
| CATGATCCCATAATAGCGAT+GGG | - | chr8_4:50809983-50810002 | Msa1331300:intron | 40.0% | |
| ATGATCCCATAATAGCGATG+GGG | - | chr8_4:50809984-50810003 | Msa1331300:intron | 40.0% | |
| TCTTGTGTTGCAAAACTGTG+AGG | - | chr8_4:50810155-50810174 | Msa1331300:intron | 40.0% | |
| CGCAACTGTAAACTTGTATG+AGG | + | chr8_4:50810191-50810210 | None:intergenic | 40.0% | |
| AGTCGGGAGCAAAAATATCA+AGG | + | chr8_4:50810337-50810356 | None:intergenic | 40.0% | |
| ! | TTTTTGCTCCCGACTCTAAA+AGG | - | chr8_4:50810342-50810361 | Msa1331300:intron | 40.0% |
| !!! | AGAAAGCACCTTTTAGAGTC+GGG | + | chr8_4:50810353-50810372 | None:intergenic | 40.0% |
| !!! | CAGAAAGCACCTTTTAGAGT+CGG | + | chr8_4:50810354-50810373 | None:intergenic | 40.0% |
| !! | CTAAAAGGTGCTTTCTGAGT+TGG | - | chr8_4:50810357-50810376 | Msa1331300:intron | 40.0% |
| ! | TCTTTTGCGATCAAAGCTGA+TGG | - | chr8_4:50810546-50810565 | Msa1331300:CDS | 40.0% |
| ! | GAAAAGCATAACGGCAGAAA+AGG | - | chr8_4:50810638-50810657 | Msa1331300:intron | 40.0% |
| TCATCACTTCATTGAGTCTG+CGG | - | chr8_4:50810899-50810918 | Msa1331300:intron | 40.0% | |
| CGTGAAGGCAACAAAAATCA+CGG | - | chr8_4:50811205-50811224 | Msa1331300:intron | 40.0% | |
| AGAAGACCTAAGCATTTGCA+CGG | - | chr8_4:50811293-50811312 | Msa1331300:intron | 40.0% | |
| ATCAAACCGTGCAAATGCTT+AGG | + | chr8_4:50811302-50811321 | None:intergenic | 40.0% | |
| ! | AAGACTTTAGGGGAAGTTGT+GGG | - | chr8_4:50811457-50811476 | Msa1331300:five_prime_UTR | 40.0% |
| ! | ATGTGAACTGACTCATGCTT+TGG | - | chr8_4:50811496-50811515 | Msa1331300:five_prime_UTR | 40.0% |
| ! | TGTGAACTGACTCATGCTTT+GGG | - | chr8_4:50811497-50811516 | Msa1331300:five_prime_UTR | 40.0% |
| AGGTGAAAACAACGAATCCC+AGG | - | chr8_4:50808216-50808235 | Msa1331300:intron | 45.0% | |
| GGACGAACACAATACTTCCT+GGG | + | chr8_4:50808236-50808255 | None:intergenic | 45.0% | |
| TATTGTGTTCGTCCCAACAC+TGG | - | chr8_4:50808242-50808261 | Msa1331300:intron | 45.0% | |
| GGCAAGACAATTCCAGTGTT+GGG | + | chr8_4:50808257-50808276 | None:intergenic | 45.0% | |
| TGGCAAGACAATTCCAGTGT+TGG | + | chr8_4:50808258-50808277 | None:intergenic | 45.0% | |
| TACCTGCGATGTTATGGGTA+CGG | - | chr8_4:50808283-50808302 | Msa1331300:intron | 45.0% | |
| ! | AGCTTCTTTTTGCGCTTGCA+TGG | + | chr8_4:50808399-50808418 | None:intergenic | 45.0% |
| CAGAGCGTAAAAACCAACGA+TGG | - | chr8_4:50808455-50808474 | Msa1331300:intron | 45.0% | |
| ! | TTTTGGACTGACACCATCGT+TGG | + | chr8_4:50808471-50808490 | None:intergenic | 45.0% |
| CGGGATTGCTTAGTTCAACA+AGG | - | chr8_4:50808596-50808615 | Msa1331300:intron | 45.0% | |
| TATAAGGAGAGCAGAGATCC+AGG | - | chr8_4:50809089-50809108 | Msa1331300:intron | 45.0% | |
| TACAAGCTGTACCGTTCGTA+GGG | - | chr8_4:50809268-50809287 | Msa1331300:intron | 45.0% | |
| ! | CATATAAGGGTGTGGTAGGA+TGG | + | chr8_4:50809599-50809618 | None:intergenic | 45.0% |
| CATCCTACCACACCCTTATA+TGG | - | chr8_4:50809597-50809616 | Msa1331300:intron | 45.0% | |
| ! | TGTTTGGTTCAAACAAGGGG+AGG | - | chr8_4:50809622-50809641 | Msa1331300:intron | 45.0% |
| ! | GTTTGGTTCAAACAAGGGGA+GGG | - | chr8_4:50809623-50809642 | Msa1331300:intron | 45.0% |
| ! | TTTGGTTCAAACAAGGGGAG+GGG | - | chr8_4:50809624-50809643 | Msa1331300:intron | 45.0% |
| AGGGGAGGAAAGATGAAATG+AGG | - | chr8_4:50809642-50809661 | Msa1331300:intron | 45.0% | |
| TAAGAGTCTGTTTGGTTGGG+GGG | + | chr8_4:50809930-50809949 | None:intergenic | 45.0% | |
| CCATCGCTATTATGGGATCA+TGG | + | chr8_4:50809985-50810004 | None:intergenic | 45.0% | |
| CCATGATCCCATAATAGCGA+TGG | - | chr8_4:50809982-50810001 | Msa1331300:intron | 45.0% | |
| TGATCCCATAATAGCGATGG+GGG | - | chr8_4:50809985-50810004 | Msa1331300:intron | 45.0% | |
| ATTGCCCCCATCGCTATTAT+GGG | + | chr8_4:50809992-50810011 | None:intergenic | 45.0% | |
| AATTGCCCCCATCGCTATTA+TGG | + | chr8_4:50809993-50810012 | None:intergenic | 45.0% | |
| AGGCAAGAGCTCTTATCTCA+AGG | - | chr8_4:50810781-50810800 | Msa1331300:CDS | 45.0% | |
| GAAGGCAACAAAAATCACGG+TGG | - | chr8_4:50811208-50811227 | Msa1331300:intron | 45.0% | |
| GGCTTACTTGGCGTAATCAT+GGG | - | chr8_4:50811259-50811278 | Msa1331300:CDS | 45.0% | |
| GCTTACTTGGCGTAATCATG+GGG | - | chr8_4:50811260-50811279 | Msa1331300:CDS | 45.0% | |
| CCACAATTGCTTGAACAGTG+AGG | + | chr8_4:50811349-50811368 | None:intergenic | 45.0% | |
| CCTCACTGTTCAAGCAATTG+TGG | - | chr8_4:50811346-50811365 | Msa1331300:intron | 45.0% | |
| ! | GAAGACTTTAGGGGAAGTTG+TGG | - | chr8_4:50811456-50811475 | Msa1331300:five_prime_UTR | 45.0% |
| GGTCAAAACGACCACAAATC+AGG | - | chr8_4:50811609-50811628 | Msa1331300:five_prime_UTR | 45.0% | |
| ACCACAAATCAGGAACTCTC+AGG | - | chr8_4:50811619-50811638 | Msa1331300:five_prime_UTR | 45.0% | |
| !! | AAAATTATAAAATTCATATT+TGG | + | chr8_4:50810273-50810292 | None:intergenic | 5.0% |
| TACTCAGAGATGAGTCCCGA+TGG | - | chr8_4:50807757-50807776 | Msa1331300:three_prime_UTR | 50.0% | |
| ATGCTGAGGAGATCACCATC+GGG | + | chr8_4:50807775-50807794 | None:intergenic | 50.0% | |
| GATGCTGAGGAGATCACCAT+CGG | + | chr8_4:50807776-50807795 | None:intergenic | 50.0% | |
| GGGACGAACACAATACTTCC+TGG | + | chr8_4:50808237-50808256 | None:intergenic | 50.0% | |
| ATCCGTACCCATAACATCGC+AGG | + | chr8_4:50808288-50808307 | None:intergenic | 50.0% | |
| TCCAGCCGATATGCAATGCA+AGG | - | chr8_4:50808418-50808437 | Msa1331300:intron | 50.0% | |
| TCCTTGCATTGCATATCGGC+TGG | + | chr8_4:50808422-50808441 | None:intergenic | 50.0% | |
| GCTTAGTTCAACAAGGAGGC+AGG | - | chr8_4:50808603-50808622 | Msa1331300:intron | 50.0% | |
| ! | CGAGGAGTGCAAATTGAGAG+TGG | - | chr8_4:50808635-50808654 | Msa1331300:intron | 50.0% |
| !! | TCCCAGAAGGTTCTGAGGAA+GGG | - | chr8_4:50808691-50808710 | Msa1331300:intron | 50.0% |
| ACCCTTCCTCAGAACCTTCT+GGG | + | chr8_4:50808695-50808714 | None:intergenic | 50.0% | |
| TTGTGCGAATTCAGGACCAC+TGG | + | chr8_4:50808754-50808773 | None:intergenic | 50.0% | |
| TGGTCCTGAATTCGCACAAG+TGG | - | chr8_4:50808755-50808774 | Msa1331300:intron | 50.0% | |
| GGTCCTGAATTCGCACAAGT+GGG | - | chr8_4:50808756-50808775 | Msa1331300:intron | 50.0% | |
| GCAGATTTGTCTTGAGCCAC+AGG | + | chr8_4:50808893-50808912 | None:intergenic | 50.0% | |
| GGCTCAAGACAAATCTGCAG+AGG | - | chr8_4:50808895-50808914 | Msa1331300:intron | 50.0% | |
| CTACAAGCTGTACCGTTCGT+AGG | - | chr8_4:50809267-50809286 | Msa1331300:intron | 50.0% | |
| ! | ATAAGGGTGTGGTAGGATGG+AGG | + | chr8_4:50809596-50809615 | None:intergenic | 50.0% |
| ! | TGAGGTATCCTGTTTGGTGG+AGG | - | chr8_4:50809660-50809679 | Msa1331300:intron | 50.0% |
| ! | GAGGTATCCTGTTTGGTGGA+GGG | - | chr8_4:50809661-50809680 | Msa1331300:intron | 50.0% |
| ! | AGGTATCCTGTTTGGTGGAG+GGG | - | chr8_4:50809662-50809681 | Msa1331300:intron | 50.0% |
| TTTGGTTGGGGGGAAATGGA+GGG | + | chr8_4:50809920-50809939 | None:intergenic | 50.0% | |
| TCTGTTTGGTTGGGGGGAAA+TGG | + | chr8_4:50809924-50809943 | None:intergenic | 50.0% | |
| ! | GATCGAAGGTACGACTTGAG+GGG | + | chr8_4:50809963-50809982 | None:intergenic | 50.0% |
| ! | GGATCGAAGGTACGACTTGA+GGG | + | chr8_4:50809964-50809983 | None:intergenic | 50.0% |
| ! | TGGATCGAAGGTACGACTTG+AGG | + | chr8_4:50809965-50809984 | None:intergenic | 50.0% |
| AGTGAATCCTCACCAGTTCC+TGG | + | chr8_4:50810854-50810873 | None:intergenic | 50.0% | |
| CATTGAGTCTGCGGTCTTCA+TGG | - | chr8_4:50810908-50810927 | Msa1331300:intron | 50.0% | |
| CGGCTTACTTGGCGTAATCA+TGG | - | chr8_4:50811258-50811277 | Msa1331300:CDS | 50.0% | |
| ! | GCCTGAGAGTTCCTGATTTG+TGG | + | chr8_4:50811623-50811642 | None:intergenic | 50.0% |
| GTTCGAGAGGTTCGATGCTG+AGG | + | chr8_4:50807789-50807808 | None:intergenic | 55.0% | |
| CAGGGGAACTTGAGTTCGAG+AGG | + | chr8_4:50807802-50807821 | None:intergenic | 55.0% | |
| CAACAAGGAGGCAGGACATG+TGG | - | chr8_4:50808611-50808630 | Msa1331300:intron | 55.0% | |
| !! | GAACCTTCTGGGACTGGAGA+TGG | + | chr8_4:50808684-50808703 | None:intergenic | 55.0% |
| TCCAGTCCCAGAAGGTTCTG+AGG | - | chr8_4:50808686-50808705 | Msa1331300:intron | 55.0% | |
| !! | TCCTCAGAACCTTCTGGGAC+TGG | + | chr8_4:50808690-50808709 | None:intergenic | 55.0% |
| !! | GTCCCAGAAGGTTCTGAGGA+AGG | - | chr8_4:50808690-50808709 | Msa1331300:intron | 55.0% |
| GACCCTTCCTCAGAACCTTC+TGG | + | chr8_4:50808696-50808715 | None:intergenic | 55.0% | |
| GGACCCACTTGTGCGAATTC+AGG | + | chr8_4:50808762-50808781 | None:intergenic | 55.0% | |
| AGGATCTGCTGAACGACCTG+TGG | - | chr8_4:50808874-50808893 | Msa1331300:intron | 55.0% | |
| GAGATGAGAGTGGGGAGAGA+AGG | - | chr8_4:50809198-50809217 | Msa1331300:intron | 55.0% | |
| ! | GTCGATGTCTTTTCTCGCCC+CGG | + | chr8_4:50809391-50809410 | None:intergenic | 55.0% |
| AATGCTCCCCTCCACCAAAC+AGG | + | chr8_4:50809671-50809690 | None:intergenic | 55.0% | |
| !! | TGGTGGAGGGGAGCATTTCA+AGG | - | chr8_4:50809674-50809693 | Msa1331300:intron | 55.0% |
| !! | GGTGGAGGGGAGCATTTCAA+GGG | - | chr8_4:50809675-50809694 | Msa1331300:intron | 55.0% |
| !! | GAGGGGAGCATTTCAAGGGA+GGG | - | chr8_4:50809679-50809698 | Msa1331300:intron | 55.0% |
| GTTTGGTTGGGGGGAAATGG+AGG | + | chr8_4:50809921-50809940 | None:intergenic | 55.0% | |
| ! | GAAGGTACGACTTGAGGGGT+TGG | + | chr8_4:50809959-50809978 | None:intergenic | 55.0% |
| GAATCCTCACCAGTTCCTGG+CGG | + | chr8_4:50810851-50810870 | None:intergenic | 55.0% | |
| TAGGAGCTGCTGAAGCGTGA+AGG | - | chr8_4:50811190-50811209 | Msa1331300:intron | 55.0% | |
| ! | ACTGGAGATGGTGGTTGCGG+CGG | + | chr8_4:50808672-50808691 | None:intergenic | 60.0% |
| ! | GGGACTGGAGATGGTGGTTG+CGG | + | chr8_4:50808675-50808694 | None:intergenic | 60.0% |
| !! | CCTTCTGGGACTGGAGATGG+TGG | + | chr8_4:50808681-50808700 | None:intergenic | 60.0% |
| CCACCATCTCCAGTCCCAGA+AGG | - | chr8_4:50808678-50808697 | Msa1331300:intron | 60.0% | |
| GAGGAAGGGTCATCCCCTAG+AGG | - | chr8_4:50808705-50808724 | Msa1331300:intron | 60.0% | |
| GGTTCAAACAAGGGGAGGGG+AGG | - | chr8_4:50809627-50809646 | Msa1331300:intron | 60.0% | |
| !! | GGAGGGGAGCATTTCAAGGG+AGG | - | chr8_4:50809678-50809697 | Msa1331300:intron | 60.0% |
| GGGGGAAATGGAGGGAAGGA+AGG | + | chr8_4:50809912-50809931 | None:intergenic | 60.0% | |
| GTTGGGGGGAAATGGAGGGA+AGG | + | chr8_4:50809916-50809935 | None:intergenic | 60.0% | |
| ACAAACTAGCAGGCTCCGCC+AGG | - | chr8_4:50810833-50810852 | Msa1331300:intron | 60.0% | |
| GGAGGCAGGACATGTGGTCG+AGG | - | chr8_4:50808617-50808636 | Msa1331300:intron | 65.0% | |
| TAGCAGGCTCCGCCAGGAAC+TGG | - | chr8_4:50810839-50810858 | Msa1331300:intron | 65.0% | |
| GGCTCCGCCAGGAACTGGTG+AGG | - | chr8_4:50810844-50810863 | Msa1331300:intron | 70.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr8_4 | gene | 50807441 | 50811770 | 50807441 | ID=Msa1331300;Name=Msa1331300 |
| chr8_4 | mRNA | 50807441 | 50811770 | 50807441 | ID=Msa1331300-mRNA-1;Parent=Msa1331300;Name=Msa1331300-mRNA-1;_AED=0.00;_eAED=0.00;_QI=325|1|1|1|1|1|8|467|242 |
| chr8_4 | exon | 50807441 | 50808018 | 50807441 | ID=Msa1331300-mRNA-1:exon:14922;Parent=Msa1331300-mRNA-1 |
| chr8_4 | exon | 50808351 | 50808428 | 50808351 | ID=Msa1331300-mRNA-1:exon:14921;Parent=Msa1331300-mRNA-1 |
| chr8_4 | exon | 50810295 | 50810345 | 50810295 | ID=Msa1331300-mRNA-1:exon:14920;Parent=Msa1331300-mRNA-1 |
| chr8_4 | exon | 50810438 | 50810602 | 50810438 | ID=Msa1331300-mRNA-1:exon:14919;Parent=Msa1331300-mRNA-1 |
| chr8_4 | exon | 50810703 | 50810818 | 50810703 | ID=Msa1331300-mRNA-1:exon:14918;Parent=Msa1331300-mRNA-1 |
| chr8_4 | exon | 50810912 | 50810993 | 50810912 | ID=Msa1331300-mRNA-1:exon:14917;Parent=Msa1331300-mRNA-1 |
| chr8_4 | exon | 50811236 | 50811306 | 50811236 | ID=Msa1331300-mRNA-1:exon:14916;Parent=Msa1331300-mRNA-1 |
| chr8_4 | exon | 50811391 | 50811770 | 50811391 | ID=Msa1331300-mRNA-1:exon:14915;Parent=Msa1331300-mRNA-1 |
| chr8_4 | five_prime_UTR | 50811446 | 50811770 | 50811446 | ID=Msa1331300-mRNA-1:five_prime_utr;Parent=Msa1331300-mRNA-1 |
| chr8_4 | CDS | 50811391 | 50811445 | 50811391 | ID=Msa1331300-mRNA-1:cds;Parent=Msa1331300-mRNA-1 |
| chr8_4 | CDS | 50811236 | 50811306 | 50811236 | ID=Msa1331300-mRNA-1:cds;Parent=Msa1331300-mRNA-1 |
| chr8_4 | CDS | 50810912 | 50810993 | 50810912 | ID=Msa1331300-mRNA-1:cds;Parent=Msa1331300-mRNA-1 |
| chr8_4 | CDS | 50810703 | 50810818 | 50810703 | ID=Msa1331300-mRNA-1:cds;Parent=Msa1331300-mRNA-1 |
| chr8_4 | CDS | 50810438 | 50810602 | 50810438 | ID=Msa1331300-mRNA-1:cds;Parent=Msa1331300-mRNA-1 |
| chr8_4 | CDS | 50810295 | 50810345 | 50810295 | ID=Msa1331300-mRNA-1:cds;Parent=Msa1331300-mRNA-1 |
| chr8_4 | CDS | 50808351 | 50808428 | 50808351 | ID=Msa1331300-mRNA-1:cds;Parent=Msa1331300-mRNA-1 |
| chr8_4 | CDS | 50807908 | 50808018 | 50807908 | ID=Msa1331300-mRNA-1:cds;Parent=Msa1331300-mRNA-1 |
| chr8_4 | three_prime_UTR | 50807441 | 50807907 | 50807441 | ID=Msa1331300-mRNA-1:three_prime_utr;Parent=Msa1331300-mRNA-1 |
| Gene Sequence |
| Protein sequence |
