AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa1414510

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa1414510 MtrunA17_Chr4g0000521 92.096 291 6 2 1 274 1 291 2.40e-169 470
Msa1414510 MtrunA17_Chr8g0341911 33.607 244 147 4 35 267 20 259 2.04e-38 135
Msa1414510 MtrunA17_Chr5g0401861 35.878 262 143 9 27 267 71 328 2.32e-35 129
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa1414510 AT3G21215.3 62.701 311 76 3 1 271 1 311 1.18e-121 350
Msa1414510 AT3G21215.2 62.866 307 74 3 1 267 1 307 5.61e-119 344
Msa1414510 AT3G21215.1 62.866 307 74 3 1 267 1 307 5.61e-119 344
Msa1414510 AT3G21215.4 62.866 307 74 3 1 267 1 307 5.61e-119 344
Msa1414510 AT2G42240.4 37.500 256 143 6 24 271 38 284 2.14e-42 147
Msa1414510 AT2G42240.1 36.905 252 142 6 24 267 38 280 7.41e-41 143
Msa1414510 AT2G42240.3 36.653 251 142 6 24 266 38 279 8.39e-40 140
Msa1414510 AT3G13700.2 32.353 272 163 6 7 267 18 279 1.10e-34 127
Msa1414510 AT3G13700.1 30.104 289 163 6 7 266 18 296 7.85e-30 114

Find 198 sgRNAs with CRISPR-Local

Find 464 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
TTCTGTATACATTGGTATTT+AGG 0.097707 tig0024129:-46565 Msa1414510:three_prime_UTR
CCTTGCAACACCCTGTTTAT+TGG 0.156343 tig0024129:-47846 Msa1414510:CDS
CCAATGACTCTATAAGTCTT+TGG 0.208218 tig0024129:+43327 None:intergenic
ATCGGTGATTAGAAAATTAA+TGG 0.209037 tig0024129:-46295 Msa1414510:three_prime_UTR
AGAAAATTAATGGTTGAAAT+TGG 0.211039 tig0024129:-46285 Msa1414510:three_prime_UTR
CTCATACTTTGCATTCAATT+TGG 0.213545 tig0024129:-47072 Msa1414510:three_prime_UTR
CTTGCAACACCCTGTTTATT+GGG 0.228971 tig0024129:-47845 Msa1414510:CDS
TTGAAGTTAAAACTATTTAA+AGG 0.234294 tig0024129:-46093 Msa1414510:three_prime_UTR
TCTCTCTCTTTAACATCTTC+TGG 0.236900 tig0024129:+50158 None:intergenic
TGGTATCTGCTTCCAACTTT+AGG 0.243384 tig0024129:-46521 Msa1414510:three_prime_UTR
AGGTAAACTACCATCAAATT+TGG 0.247222 tig0024129:-45945 Msa1414510:three_prime_UTR
TGGTTTCTCCATTCTGTTGT+AGG 0.248963 tig0024129:-47035 Msa1414510:three_prime_UTR
AACCAATATTACTACATTAT+AGG 0.249534 tig0024129:-46844 Msa1414510:three_prime_UTR
CCGGATTTACTTCAAAAGTT+AGG 0.257743 tig0024129:-50418 Msa1414510:five_prime_UTR
TGGAAGACCCGTTATAAATA+TGG 0.265459 tig0024129:+50178 None:intergenic
CGGCGGCGGGAGGCCATTGC+TGG 0.265928 tig0024129:+50329 None:intergenic
TCTGTATACATTGGTATTTA+GGG 0.267237 tig0024129:-46564 Msa1414510:three_prime_UTR
TGCTACTGCCATATTGTTGC+AGG 0.267857 tig0024129:-45989 Msa1414510:three_prime_UTR
GGAGAAGTTACAACCTTATA+TGG 0.269549 tig0024129:-43414 Msa1414510:three_prime_UTR
CAAATTTAGTTTATGTGAAC+TGG 0.274557 tig0024129:-46352 Msa1414510:three_prime_UTR
CAATGACTCTATAAGTCTTT+GGG 0.281588 tig0024129:+43328 None:intergenic
AAAGCCATTCTCACCTGAAT+TGG 0.289777 tig0024129:+48904 None:intergenic
AACTAAGTATTGGTAAATTC+AGG 0.292403 tig0024129:-47175 Msa1414510:three_prime_UTR
ACACTGCCACTCTCCATATA+AGG 0.293581 tig0024129:+43401 None:intergenic
TGAAGCAGCCATTGAATTAT+AGG 0.297235 tig0024129:-45898 Msa1414510:three_prime_UTR
AAACACCTATGAAACTAATC+TGG 0.306027 tig0024129:+46664 None:intergenic
CACCCTGTTTATTGGGAACT+TGG 0.308237 tig0024129:-47838 Msa1414510:CDS
TAGCAGTTATGTTCCAATTC+AGG 0.309823 tig0024129:-48917 Msa1414510:intron
TTAAGCAAATGAAGATTATA+AGG 0.318083 tig0024129:-47653 Msa1414510:CDS
GTACTTTAGGCGATAAAATA+TGG 0.318453 tig0024129:-46325 Msa1414510:three_prime_UTR
AACTAAGGTTTGTGTTCTAT+TGG 0.321468 tig0024129:-43435 Msa1414510:three_prime_UTR
CTTCCACAAAAGGGGCTAAT+AGG 0.324527 tig0024129:+43362 None:intergenic
GAAGGAATAGCGGTGGGTTG+AGG 0.329734 tig0024129:+50295 None:intergenic
ATCCTATAATGTAGTAATAT+TGG 0.336175 tig0024129:+46842 None:intergenic
TTTGTTTGAAATGTGCTTTA+TGG 0.336993 tig0024129:-46599 Msa1414510:three_prime_UTR
ATGAGAGTGGAAAGGGTAGA+TGG 0.339157 tig0024129:+46415 None:intergenic
AATTTACCAATACTTAGTTT+TGG 0.340502 tig0024129:+47128 None:intergenic
AATTTACCAATACTTAGTTT+TGG 0.341755 tig0024129:+47179 None:intergenic
CTCCCAAGTTCCCAATAAAC+AGG 0.342043 tig0024129:+47835 None:intergenic
GGAGGAGGAGCGGCGGCGGG+AGG 0.344741 tig0024129:+50319 None:intergenic
TTCTCTATTAACCCAGCATC+TGG 0.347556 tig0024129:-47347 Msa1414510:three_prime_UTR
GGTGCTGTTATCCCAAGTTC+TGG 0.347584 tig0024129:-47460 Msa1414510:CDS
GACAAAGCTTCCTTTCATAA+TGG 0.348216 tig0024129:-46024 Msa1414510:three_prime_UTR
AATATCAGACATGCATTTAT+CGG 0.357969 tig0024129:-46703 Msa1414510:three_prime_UTR
TATCAGAAATTCGTAGTCAT+AGG 0.363049 tig0024129:+45872 None:intergenic
CCAAAGACTTATAGAGTCAT+TGG 0.366331 tig0024129:-43327 Msa1414510:three_prime_UTR
GACGTTCCAACCAAATTTGA+TGG 0.366859 tig0024129:+45935 None:intergenic
ATAGCGGTGGGTTGAGGAGG+AGG 0.368075 tig0024129:+50301 None:intergenic
AGCAGATACCAATGCCTGTT+TGG 0.374337 tig0024129:+46533 None:intergenic
CTAAGTATTGGTAAATTCAA+TGG 0.374747 tig0024129:-47122 Msa1414510:three_prime_UTR
ATATATTGTCTGATTTATAC+AGG 0.374769 tig0024129:-46057 Msa1414510:three_prime_UTR
GGTTCCCAGATTAGTTTCAT+AGG 0.376752 tig0024129:-46669 Msa1414510:three_prime_UTR
AGGAGGAGGAGGAGCGGCGG+CGG 0.380056 tig0024129:+50315 None:intergenic
ATCCCAAGTTCTGGTTCAAT+TGG 0.381310 tig0024129:-47451 Msa1414510:CDS
GGAGGCCATTGCTGGTGGTA+AGG 0.381880 tig0024129:+50337 None:intergenic
TAGTTTCATAGGTGTTTAGA+TGG 0.388607 tig0024129:-46658 Msa1414510:three_prime_UTR
ACCTACCCTATGGCTGTTCC+TGG 0.389519 tig0024129:-46937 Msa1414510:three_prime_UTR
CAATATGGCAGTAGCAGAAA+TGG 0.389651 tig0024129:+45996 None:intergenic
TGCTGCTAAAGATATTCTTC+AGG 0.389765 tig0024129:-50027 Msa1414510:CDS
GGCATTGGTACTTGTGCAAC+AGG 0.393304 tig0024129:+48961 None:intergenic
TTACTTCAAAAGTTAGGGTT+AGG 0.393352 tig0024129:-50412 Msa1414510:five_prime_UTR
TAAGAAAATGCTTCCACAAA+AGG 0.398319 tig0024129:+43352 None:intergenic
ATAAAATATGGTGTTATAAT+CGG 0.398468 tig0024129:-46313 Msa1414510:three_prime_UTR
TGGCATCATATACATTCATT+TGG 0.402096 tig0024129:-46738 Msa1414510:three_prime_UTR
CGGATTTACTTCAAAAGTTA+GGG 0.402484 tig0024129:-50417 Msa1414510:five_prime_UTR
ATGCCAATTGAACCAGAACT+TGG 0.417682 tig0024129:+47448 None:intergenic
GACAAAATACAAGTTATATT+CGG 0.418851 tig0024129:+46204 None:intergenic
TAGCTGTTCCTTTAGAACTA+AGG 0.428248 tig0024129:-43450 Msa1414510:three_prime_UTR
CCAATGCCAAAACTAAGTAT+TGG 0.428339 tig0024129:-47185 Msa1414510:three_prime_UTR
ATTAATGCTGTGTGATCAAA+TGG 0.429021 tig0024129:+46126 None:intergenic
GGTTCGAACCATATTTATAA+CGG 0.432197 tig0024129:-50186 Msa1414510:CDS
TTTCAAAGCCGAAAAGCCTA+TGG 0.434501 tig0024129:-50084 Msa1414510:CDS
CAGTCATAAACCCCAGATGC+TGG 0.438126 tig0024129:+47335 None:intergenic
AAACTATTTAAAGGATTCTC+CGG 0.439864 tig0024129:-46084 Msa1414510:three_prime_UTR
AAGAAAATGCTTCCACAAAA+GGG 0.443157 tig0024129:+43353 None:intergenic
GGAATAGCGGTGGGTTGAGG+AGG 0.444814 tig0024129:+50298 None:intergenic
TCAATGCCAAAACTAAGTAT+TGG 0.446988 tig0024129:-47134 Msa1414510:three_prime_UTR
TAGATGGCGTTATCATTTGT+AGG 0.452371 tig0024129:-46642 Msa1414510:three_prime_UTR
ACCCTGTTTATTGGGAACTT+GGG 0.453911 tig0024129:-47837 Msa1414510:CDS
GTTCGAACCATATTTATAAC+GGG 0.455076 tig0024129:-50185 Msa1414510:CDS
TTAGGGATGCTTATCCAAAC+AGG 0.455990 tig0024129:-46547 Msa1414510:three_prime_UTR
GAGGCCATTGCTGGTGGTAA+GGG 0.456679 tig0024129:+50338 None:intergenic
AACACAAACCTTAGTTCTAA+AGG 0.459146 tig0024129:+43442 None:intergenic
GGATCATACGGAGGAGGAGG+TGG 0.460265 tig0024129:+48997 None:intergenic
GCCATTGCTGGTGGTAAGGG+TGG 0.461353 tig0024129:+50341 None:intergenic
GGAGGAGGAGGAGCGGCGGC+GGG 0.463504 tig0024129:+50316 None:intergenic
CATTGCTACTGGAGCTCCAT+TGG 0.465712 tig0024129:+46912 None:intergenic
AACCTTTGTCGATGGTTACC+TGG 0.465772 tig0024129:-50128 Msa1414510:CDS
TCATACGGAGGAGGAGGTGG+TGG 0.465780 tig0024129:+49000 None:intergenic
CAGCATCTGGGGTTTATGAC+TGG 0.465788 tig0024129:-47334 Msa1414510:three_prime_UTR
AATTTGGTTGGAACGTCTGT+TGG 0.467457 tig0024129:-45929 Msa1414510:three_prime_UTR
GGAACAGCTAGTGGCGTTTG+AGG 0.470913 tig0024129:+43463 None:intergenic
GCTGGGGATTATAATCATAC+TGG 0.472133 tig0024129:-49391 Msa1414510:CDS
ATCTTCATTTGCTTAAAGCC+AGG 0.474830 tig0024129:+47660 None:intergenic
AAACTACCATCAAATTTGGT+TGG 0.478622 tig0024129:-45941 Msa1414510:three_prime_UTR
ATGACTTATCAGTAGCTTGA+AGG 0.479145 tig0024129:-46892 Msa1414510:three_prime_UTR
AGTAAACGGTTACGAACAGC+TGG 0.481756 tig0024129:-49409 Msa1414510:CDS
GCAACAGGATAGCCTGCATA+TGG 0.482662 tig0024129:+48976 None:intergenic
GTGGTAAGGGTGGATGCCGT+TGG 0.484200 tig0024129:+50351 None:intergenic
ATGGCTGTTCCTGGTGCCAA+TGG 0.485478 tig0024129:-46928 Msa1414510:three_prime_UTR
CATTTATCGGCAGCATGTGT+TGG 0.485795 tig0024129:-46690 Msa1414510:three_prime_UTR
TACTGATAAGTCATTGCTAC+TGG 0.489556 tig0024129:+46901 None:intergenic
CCGATGTGAAACGACATTAG+AGG 0.498201 tig0024129:-43524 Msa1414510:three_prime_UTR
ACTAAGTATTGGTAAATTCA+GGG 0.498341 tig0024129:-47174 Msa1414510:three_prime_UTR
ACAACACATGAACCTAAAGT+TGG 0.498571 tig0024129:+46509 None:intergenic
TCTCTATTAACCCAGCATCT+GGG 0.500261 tig0024129:-47346 Msa1414510:three_prime_UTR
GCAAATGAAGATTATAAGGC+AGG 0.500307 tig0024129:-47649 Msa1414510:CDS
CAAAGACTTATAGAGTCATT+GGG 0.502530 tig0024129:-43326 Msa1414510:three_prime_UTR
TTCTCAAGTTCAAGTTCAAG+TGG 0.502586 tig0024129:+50461 None:intergenic
AATGATAATGAGAGTGGAAA+GGG 0.506100 tig0024129:+46408 None:intergenic
ATGCTTATCCAAACAGGCAT+TGG 0.507705 tig0024129:-46541 Msa1414510:three_prime_UTR
GGCGATGACTTGATAATCAA+TGG 0.515826 tig0024129:+46795 None:intergenic
AAATTTAGTTTATGTGAACT+GGG 0.516314 tig0024129:-46351 Msa1414510:three_prime_UTR
ATTTGGTATAAAACTGCTTG+TGG 0.517696 tig0024129:-47055 Msa1414510:three_prime_UTR
AAATGTGCACCACAATCTGC+AGG 0.517804 tig0024129:-47482 Msa1414510:CDS
GCTTTGTAATGCAGACAACC+TGG 0.519392 tig0024129:-47678 Msa1414510:intron
AGTACTACCTCTTCGGAAGA+AGG 0.521807 tig0024129:+50271 None:intergenic
CTCTATTAACCCAGCATCTG+GGG 0.521963 tig0024129:-47345 Msa1414510:three_prime_UTR
GCGGTGGGTTGAGGAGGAGG+AGG 0.522344 tig0024129:+50304 None:intergenic
CGGCGGGAGGCCATTGCTGG+TGG 0.524594 tig0024129:+50332 None:intergenic
ATCAGAAATTCGTAGTCATA+GGG 0.525268 tig0024129:+45873 None:intergenic
GGTGAGATAGACACAGGAGC+AGG 0.526097 tig0024129:+48940 None:intergenic
TCTCCATTCTGTTGTAGGCA+AGG 0.527422 tig0024129:-47030 Msa1414510:three_prime_UTR
TGAAGGAAGTACTACCTCTT+CGG 0.528081 tig0024129:+50264 None:intergenic
TTGGCACCAGGAACAGCCAT+AGG 0.533854 tig0024129:+46931 None:intergenic
TGACTTATCAGTAGCTTGAA+GGG 0.534994 tig0024129:-46891 Msa1414510:three_prime_UTR
CAAATGGAGTCATGAATGCC+AGG 0.537483 tig0024129:+46142 None:intergenic
GTCTTCTAAAGTACACTCCC+AGG 0.538418 tig0024129:-46184 Msa1414510:three_prime_UTR
TCCACCCTTACCACCAGCAA+TGG 0.538447 tig0024129:-50342 Msa1414510:CDS
AACTTCAAAACCTTTGTCGA+TGG 0.541598 tig0024129:-50136 Msa1414510:CDS
ATAGGGCACCTATAATTCAA+TGG 0.545368 tig0024129:+45890 None:intergenic
TGAAGAACAGATTTAGCCTC+GGG 0.546026 tig0024129:+49990 None:intergenic
TCCTTCTCCTTCTTCCGAAG+AGG 0.546449 tig0024129:-50278 Msa1414510:intron
AAGCTTCCTTTCATAATGGA+AGG 0.546475 tig0024129:-46020 Msa1414510:three_prime_UTR
TAGCCTGCATATGGATCATA+CGG 0.548541 tig0024129:+48985 None:intergenic
TAAACAGGGTGTTGCAAGGA+GGG 0.548723 tig0024129:+47850 None:intergenic
AACATGAGCAGTGATGATAA+TGG 0.551137 tig0024129:+46774 None:intergenic
AGCATCTGGGGTTTATGACT+GGG 0.552350 tig0024129:-47333 Msa1414510:three_prime_UTR
AACTGAGAAGCTTCAAAACC+AGG 0.556577 tig0024129:+50110 None:intergenic
TTCAAAGCCGAAAAGCCTAT+GGG 0.558458 tig0024129:-50083 Msa1414510:CDS
CCTCCGTATGATCCATATGC+AGG 0.559113 tig0024129:-48988 Msa1414510:CDS
ATTCCTTGCCTACAACAGAA+TGG 0.560024 tig0024129:+47027 None:intergenic
CATTAGAGGCTATTAAAGAA+AGG 0.560405 tig0024129:-43510 Msa1414510:three_prime_UTR
ATCTGTTCTTCATACTGAGA+TGG 0.561919 tig0024129:-49979 Msa1414510:CDS
GAAGGAGAAGGAATAGCGGT+GGG 0.564113 tig0024129:+50289 None:intergenic
AAAAGATGGAACCTACCCTA+TGG 0.564455 tig0024129:-46947 Msa1414510:three_prime_UTR
AACACCTATGAAACTAATCT+GGG 0.566767 tig0024129:+46665 None:intergenic
GATTCATTCATGGCAGCCAA+CGG 0.570409 tig0024129:-50367 Msa1414510:exon
TAACAGCACCCTGCAGATTG+TGG 0.570755 tig0024129:+47473 None:intergenic
CATTAATGAGGAAGAAGTGA+GGG 0.575202 tig0024129:-47808 Msa1414510:CDS
ATGAAGAACAGATTTAGCCT+CGG 0.577945 tig0024129:+49989 None:intergenic
AATGGACCTTCCATTATGAA+AGG 0.578687 tig0024129:+46014 None:intergenic
AGTCATAAACCCCAGATGCT+GGG 0.579970 tig0024129:+47336 None:intergenic
TATGGATCATACGGAGGAGG+AGG 0.580137 tig0024129:+48994 None:intergenic
ATAGACACAGGAGCAGGCAT+TGG 0.580929 tig0024129:+48946 None:intergenic
CAATGATAATGAGAGTGGAA+AGG 0.592019 tig0024129:+46407 None:intergenic
AATGACAATGATAATGAGAG+TGG 0.596480 tig0024129:+46402 None:intergenic
AATCAGACAATATATAACTC+CGG 0.598244 tig0024129:+46065 None:intergenic
TGAATTGGAACATAACTGCT+AGG 0.602093 tig0024129:+48919 None:intergenic
ACCTCTTCGGAAGAAGGAGA+AGG 0.602484 tig0024129:+50277 None:intergenic
ACAGCTAGTGGCGTTTGAGG+TGG 0.602799 tig0024129:+43466 None:intergenic
ATTTAGTTTATGTGAACTGG+GGG 0.602858 tig0024129:-46349 Msa1414510:three_prime_UTR
CCAATAAACAGGGTGTTGCA+AGG 0.603873 tig0024129:+47846 None:intergenic
ACTGGAGCTCCATTGGCACC+AGG 0.605650 tig0024129:+46919 None:intergenic
CTTGGGAGAGAACATTAATG+AGG 0.606113 tig0024129:-47820 Msa1414510:CDS
GCATATGGATCATACGGAGG+AGG 0.606969 tig0024129:+48991 None:intergenic
TGAAGATTATAAGGCAGGAG+AGG 0.609049 tig0024129:-47644 Msa1414510:CDS
TGCCAATTGAACCAGAACTT+GGG 0.610282 tig0024129:+47449 None:intergenic
AGTTCTAAAGGAACAGCTAG+TGG 0.610897 tig0024129:+43454 None:intergenic
AATTTAGTTTATGTGAACTG+GGG 0.610923 tig0024129:-46350 Msa1414510:three_prime_UTR
GACTTATCAGTAGCTTGAAG+GGG 0.615446 tig0024129:-46890 Msa1414510:three_prime_UTR
TGGCACCAGGAACAGCCATA+GGG 0.617677 tig0024129:+46932 None:intergenic
AGAAAATGCTTCCACAAAAG+GGG 0.620217 tig0024129:+43354 None:intergenic
TTGAAGAGAGCAAAACCCAT+AGG 0.622823 tig0024129:+50068 None:intergenic
TTAGCAGCAATAGCTTGATG+AGG 0.625830 tig0024129:+50041 None:intergenic
TATATTGTCTGATTTATACA+GGG 0.645169 tig0024129:-46056 Msa1414510:three_prime_UTR
AATGACTCTATAAGTCTTTG+GGG 0.646712 tig0024129:+43329 None:intergenic
ACATTAATGAGGAAGAAGTG+AGG 0.646735 tig0024129:-47809 Msa1414510:CDS
AGAAGGAGAAGGAATAGCGG+TGG 0.646815 tig0024129:+50288 None:intergenic
AAACAAATGAAAGAAACTCA+CGG 0.653052 tig0024129:+47221 None:intergenic
TTACAACCTTATATGGAGAG+TGG 0.656010 tig0024129:-43407 Msa1414510:three_prime_UTR
AAATGGAGTCATGAATGCCA+GGG 0.656673 tig0024129:+46143 None:intergenic
CCTCTAATGTCGTTTCACAT+CGG 0.664600 tig0024129:+43524 None:intergenic
TGTTTAGAGTAAAACGACAC+CGG 0.666550 tig0024129:-50437 Msa1414510:five_prime_UTR
AACCAGGTAACCATCGACAA+AGG 0.666576 tig0024129:+50126 None:intergenic
TCCCAAGTTCCCAATAAACA+GGG 0.668529 tig0024129:+47836 None:intergenic
GTTCTGGTTCAATTGGCATG+CGG 0.674324 tig0024129:-47444 Msa1414510:CDS
AATGTGCACCACAATCTGCA+GGG 0.681242 tig0024129:-47481 Msa1414510:CDS
GTAAACGGTTACGAACAGCT+GGG 0.684153 tig0024129:-49408 Msa1414510:CDS
TAAACGGTTACGAACAGCTG+GGG 0.691927 tig0024129:-49407 Msa1414510:CDS
TGGAGTCATGAATGCCAGGG+TGG 0.694151 tig0024129:+46146 None:intergenic
CTGCTAGGTGAGATAGACAC+AGG 0.695547 tig0024129:+48934 None:intergenic
ATAAACAGGGTGTTGCAAGG+AGG 0.695618 tig0024129:+47849 None:intergenic
ACCAGGAACAGCCATAGGGT+AGG 0.709355 tig0024129:+46936 None:intergenic
ATTAATGAGGAAGAAGTGAG+GGG 0.716298 tig0024129:-47807 Msa1414510:CDS
GGAAGAAGGAGAAGGAATAG+CGG 0.729192 tig0024129:+50285 None:intergenic
CCTGCATATGGATCATACGG+AGG 0.734736 tig0024129:+48988 None:intergenic
TCATGTTAATGAATGCACAG+TGG 0.853491 tig0024129:-46758 Msa1414510:three_prime_UTR

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! TTAAAAAATTTAAGAGTTTA+AGG - tig0024129:48359-48378 Msa1414510:intron 10.0%
!!! AATAAGTAAATTTTTTTTGT+AGG - tig0024129:48419-48438 Msa1414510:intron 10.0%
!!! ATAAGTAAATTTTTTTTGTA+GGG - tig0024129:48420-48439 Msa1414510:intron 10.0%
!! TTAAAAATGCTATTAAAATT+AGG - tig0024129:48444-48463 Msa1414510:intron 10.0%
!!! ACATTTTAATATTTAGTTTT+TGG - tig0024129:48688-48707 Msa1414510:intron 10.0%
!!! CATTTTAATATTTAGTTTTT+GGG - tig0024129:48689-48708 Msa1414510:intron 10.0%
!! TTTAAATTAATAAATTTCTC+CGG + tig0024129:49260-49279 None:intergenic 10.0%
!!! TTATTAATTTATGATTTTCT+TGG - tig0024129:49545-49564 Msa1414510:intron 10.0%
!!! TATTAATTTATGATTTTCTT+GGG - tig0024129:49546-49565 Msa1414510:intron 10.0%
!!! TAATAAGATAATAATTTTTC+GGG + tig0024129:49594-49613 None:intergenic 10.0%
!!! AAAATGAATAATTTTTCTTA+TGG + tig0024129:50465-50484 None:intergenic 10.0%
!!! TCAATTTTTATTCAATTATG+TGG - tig0024129:43839-43858 Msa1414510:intron 15.0%
!!! CTTATTTTGATTTTTTTTGT+AGG - tig0024129:44277-44296 Msa1414510:intron 15.0%
!! GAAAAAATATGATGTTTAAA+GGG - tig0024129:45674-45693 Msa1414510:intron 15.0%
!! TCATTGATAAACAATATTAA+CGG + tig0024129:45813-45832 None:intergenic 15.0%
!! ATAAACTAAATTTGAAAAAC+AGG + tig0024129:47382-47401 None:intergenic 15.0%
!!! ATAAAATATGGTGTTATAAT+CGG - tig0024129:47427-47446 Msa1414510:CDS 15.0%
!! TTGAAGTTAAAACTATTTAA+AGG - tig0024129:47647-47666 Msa1414510:CDS 15.0%
!!! CAAAAAAAACTAACATTTTT+CGG + tig0024129:47896-47915 None:intergenic 15.0%
!! AATGCTATTAAAATTAAGTA+AGG + tig0024129:48037-48056 None:intergenic 15.0%
!! AAGCATAAATTAAACAAATT+TGG + tig0024129:48109-48128 None:intergenic 15.0%
!!! AATTTTTGCGATATTTTTTT+TGG + tig0024129:48193-48212 None:intergenic 15.0%
!! AGATATAAGTAACAAAAATA+TGG + tig0024129:48228-48247 None:intergenic 15.0%
!!! TAAACAAAATTTATTTTAGC+AGG - tig0024129:48387-48406 Msa1414510:intron 15.0%
!!! AAACAAAATTTATTTTAGCA+GGG - tig0024129:48388-48407 Msa1414510:intron 15.0%
!! AAAAAAAAAAAATCAACTTG+AGG - tig0024129:48965-48984 Msa1414510:CDS 15.0%
!! TTCTATAAATTAATAATGTC+AGG - tig0024129:49233-49252 Msa1414510:intron 15.0%
!!! TCTAAAATAATAAATTTGTC+TGG + tig0024129:49660-49679 None:intergenic 15.0%
!!! AAACTCTTTAATTTAATACT+CGG + tig0024129:49698-49717 None:intergenic 15.0%
!!! AATTCAATTATGCTTTTTTC+AGG - tig0024129:43533-43552 Msa1414510:intron 20.0%
!!! TTTAAAATAATCACATGTGT+CGG + tig0024129:43996-44015 None:intergenic 20.0%
!! TTTAGACTAAATTATGGTAT+TGG - tig0024129:44123-44142 Msa1414510:intron 20.0%
!!! TTGATTTTTTTTGTAGGAAT+AGG - tig0024129:44283-44302 Msa1414510:intron 20.0%
!! CAAACTTTCAGTTAATAATA+TGG + tig0024129:44692-44711 None:intergenic 20.0%
!!! TGAAAGTTTGTTTGTTTTTA+TGG - tig0024129:44702-44721 Msa1414510:intron 20.0%
!! GGAAAAAATATGATGTTTAA+AGG - tig0024129:45673-45692 Msa1414510:intron 20.0%
!! TTAAGCAAATGAAGATTATA+AGG - tig0024129:46087-46106 Msa1414510:three_prime_UTR 20.0%
!!! TACAATATCCTTTTTTATTG+TGG - tig0024129:46320-46339 Msa1414510:three_prime_UTR 20.0%
!!! TCTTTCATTTGTTTTTTCAA+TGG - tig0024129:46528-46547 Msa1414510:three_prime_UTR 20.0%
!!! AATTTACCAATACTTAGTTT+TGG + tig0024129:46564-46583 None:intergenic 20.0%
!!! TTTTGGCATTGAAAAATATA+AGG + tig0024129:46598-46617 None:intergenic 20.0%
!!! AATTTACCAATACTTAGTTT+TGG + tig0024129:46564-46583 None:intergenic 20.0%
!! AACCAATATTACTACATTAT+AGG - tig0024129:46896-46915 Msa1414510:three_prime_UTR 20.0%
!! ATCCTATAATGTAGTAATAT+TGG + tig0024129:46901-46920 None:intergenic 20.0%
!!! AAATTTAGTTTATGTGAACT+GGG - tig0024129:47389-47408 Msa1414510:three_prime_UTR 20.0%
!! AGAAAATTAATGGTTGAAAT+TGG - tig0024129:47455-47474 Msa1414510:CDS 20.0%
!! GACAAAATACAAGTTATATT+CGG + tig0024129:47539-47558 None:intergenic 20.0%
!! ATATATTGTCTGATTTATAC+AGG - tig0024129:47683-47702 Msa1414510:intron 20.0%
!! TATATTGTCTGATTTATACA+GGG - tig0024129:47684-47703 Msa1414510:intron 20.0%
!!! TTAGTTTTTTTTGCAAGAAT+TGG - tig0024129:47903-47922 Msa1414510:intron 20.0%
!!! GTTTTTCAACAATTTTTTAC+AGG - tig0024129:48139-48158 Msa1414510:intron 20.0%
!! AATGCTATTAAAATTAGGTA+AGG - tig0024129:48449-48468 Msa1414510:intron 20.0%
!!! TAATGGGTTAATTATGTTTT+TGG + tig0024129:48507-48526 None:intergenic 20.0%
!! CTAATGTAAGATAAAATGTT+GGG + tig0024129:48892-48911 None:intergenic 20.0%
!! ACTAATGTAAGATAAAATGT+TGG + tig0024129:48893-48912 None:intergenic 20.0%
!!! TTTTATCTTACATTAGTGAA+TGG - tig0024129:48896-48915 Msa1414510:intron 20.0%
!! TATATAGTTATATTAGCATG+TGG - tig0024129:49055-49074 Msa1414510:intron 20.0%
!! TATGTTATTCTCACTTAATT+AGG - tig0024129:50114-50133 Msa1414510:CDS 20.0%
!! TAGCCTAAATATATATATGA+TGG - tig0024129:50155-50174 Msa1414510:CDS 20.0%
!! CAACCATCATATATATATTT+AGG + tig0024129:50161-50180 None:intergenic 20.0%
!!! TGTGAATTTTGATTCATTCA+TGG - tig0024129:43363-43382 Msa1414510:three_prime_UTR 25.0%
! AATAAATAGAAGAAGAGTGA+AGG + tig0024129:43496-43515 None:intergenic 25.0%
! AAAAATCTCTTTGTTAAACG+AGG - tig0024129:43789-43808 Msa1414510:intron 25.0%
!!! TTGCTTTTGATCAAAGTAAA+CGG - tig0024129:44317-44336 Msa1414510:intron 25.0%
! AAAACAATGTTGTCAAATAG+TGG - tig0024129:44483-44502 Msa1414510:intron 25.0%
!! GTTTTTATGGTCTAGATATA+TGG - tig0024129:44715-44734 Msa1414510:intron 25.0%
!! TTAAACTGTTAATGCTACTT+TGG - tig0024129:44857-44876 Msa1414510:intron 25.0%
! AAAGTTGGAGTAATTATTGA+GGG + tig0024129:45133-45152 None:intergenic 25.0%
! AAAAGTTGGAGTAATTATTG+AGG + tig0024129:45134-45153 None:intergenic 25.0%
! TGTCTTTCTCTAATAAAGTA+AGG - tig0024129:45184-45203 Msa1414510:intron 25.0%
! GTCTTTCTCTAATAAAGTAA+GGG - tig0024129:45185-45204 Msa1414510:intron 25.0%
! ATCAATTTCTAACAGTTGAA+TGG + tig0024129:45370-45389 None:intergenic 25.0%
!!! TCTATTTTAACTACCAAAGA+AGG - tig0024129:45582-45601 Msa1414510:intron 25.0%
!!! AACATCATATTTTTTCCAGT+AGG + tig0024129:45670-45689 None:intergenic 25.0%
! GATTAATCCAATATATGACA+CGG + tig0024129:46031-46050 None:intergenic 25.0%
! ATGAAAAATACATGGTAAGT+TGG + tig0024129:46485-46504 None:intergenic 25.0%
! TATCAGTGATGAAAAATACA+TGG + tig0024129:46493-46512 None:intergenic 25.0%
! AAACAAATGAAAGAAACTCA+CGG + tig0024129:46522-46541 None:intergenic 25.0%
!!! AACTAAGTATTGGTAAATTC+AGG - tig0024129:46565-46584 Msa1414510:three_prime_UTR 25.0%
!!! ACTAAGTATTGGTAAATTCA+GGG - tig0024129:46566-46585 Msa1414510:three_prime_UTR 25.0%
!!! CTAAGTATTGGTAAATTCAA+TGG - tig0024129:46618-46637 Msa1414510:three_prime_UTR 25.0%
! AGATATTCCAAAAATCCATT+TGG - tig0024129:46764-46783 Msa1414510:three_prime_UTR 25.0%
!!! TCTTTTTCCAAATGGATTTT+TGG + tig0024129:46774-46793 None:intergenic 25.0%
! AATATCAGACATGCATTTAT+CGG - tig0024129:47037-47056 Msa1414510:three_prime_UTR 25.0%
!! TTTGTTTGAAATGTGCTTTA+TGG - tig0024129:47141-47160 Msa1414510:three_prime_UTR 25.0%
!! TTAGACTTTTCTGTATACAT+TGG - tig0024129:47167-47186 Msa1414510:three_prime_UTR 25.0%
! TTCTGTATACATTGGTATTT+AGG - tig0024129:47175-47194 Msa1414510:three_prime_UTR 25.0%
! TCTGTATACATTGGTATTTA+GGG - tig0024129:47176-47195 Msa1414510:three_prime_UTR 25.0%
!!! TGATGCTTTCTTTATTTTCA+TGG - tig0024129:47277-47296 Msa1414510:three_prime_UTR 25.0%
! AACTAAATTTGAAAAACAGG+AGG + tig0024129:47379-47398 None:intergenic 25.0%
!! CAAATTTAGTTTATGTGAAC+TGG - tig0024129:47388-47407 Msa1414510:three_prime_UTR 25.0%
!! AATTTAGTTTATGTGAACTG+GGG - tig0024129:47390-47409 Msa1414510:three_prime_UTR 25.0%
! ATCGGTGATTAGAAAATTAA+TGG - tig0024129:47445-47464 Msa1414510:CDS 25.0%
! AAACTATTTAAAGGATTCTC+CGG - tig0024129:47656-47675 Msa1414510:CDS 25.0%
! AATCAGACAATATATAACTC+CGG + tig0024129:47678-47697 None:intergenic 25.0%
!!! GAGTGCAAATTTTTTTTGTA+GGG + tig0024129:48066-48085 None:intergenic 25.0%
!!! TGAGTGCAAATTTTTTTTGT+AGG + tig0024129:48067-48086 None:intergenic 25.0%
! AAACAAATTTGGATTGAGTA+AGG + tig0024129:48098-48117 None:intergenic 25.0%
! GTGTTAAGAACGTTATTAAA+AGG - tig0024129:48163-48182 Msa1414510:intron 25.0%
!!! TTTTGCGATATTTTTTTTGG+AGG + tig0024129:48190-48209 None:intergenic 25.0%
! TTAACCCATTATAATACACT+AGG - tig0024129:48516-48535 Msa1414510:intron 25.0%
! TAACCCATTATAATACACTA+GGG - tig0024129:48517-48536 Msa1414510:intron 25.0%
!! AGTTTAAAATCATTGATAGC+AGG + tig0024129:48606-48625 None:intergenic 25.0%
! AAACAAGTTAGAACAGTTTA+TGG + tig0024129:48728-48747 None:intergenic 25.0%
! TATAACTGCTTATATTGCAT+TGG + tig0024129:49039-49058 None:intergenic 25.0%
! TAAATTAATAATGTCAGGAC+CGG - tig0024129:49238-49257 Msa1414510:intron 25.0%
! TTGGGACTGAAAATTATAAA+AGG - tig0024129:49564-49583 Msa1414510:intron 25.0%
! TAATTTACCCTGATATACAT+GGG + tig0024129:49902-49921 None:intergenic 25.0%
!!! TTTTAAGTAAATCTTAGCGA+AGG + tig0024129:49931-49950 None:intergenic 25.0%
!!! TCAGTTGAAAGGTTTTTTAT+GGG + tig0024129:49991-50010 None:intergenic 25.0%
!!! TTCAGTTGAAAGGTTTTTTA+TGG + tig0024129:49992-50011 None:intergenic 25.0%
!! AAAATGTTGATTACCAAAAC+AGG - tig0024129:50193-50212 Msa1414510:intron 25.0%
!!! CCTAACTTTTGAAGTAAATC+CGG + tig0024129:43325-43344 None:intergenic 30.0%
CGGATTTACTTCAAAAGTTA+GGG - tig0024129:43323-43342 Msa1414510:three_prime_UTR 30.0%
TTACTTCAAAAGTTAGGGTT+AGG - tig0024129:43328-43347 Msa1414510:three_prime_UTR 30.0%
GGTTCGAACCATATTTATAA+CGG - tig0024129:43554-43573 Msa1414510:intron 30.0%
GTTCGAACCATATTTATAAC+GGG - tig0024129:43555-43574 Msa1414510:intron 30.0%
CGGTGATTTAGACTAAATTA+TGG - tig0024129:44117-44136 Msa1414510:intron 30.0%
TTTGAATTCGGAGTTAAGTT+TGG + tig0024129:44218-44237 None:intergenic 30.0%
! TGTTGTGAAATAGTTGCTTT+AGG - tig0024129:44568-44587 Msa1414510:intron 30.0%
! GTTGTGAAATAGTTGCTTTA+GGG - tig0024129:44569-44588 Msa1414510:intron 30.0%
! TTGTGAAATAGTTGCTTTAG+GGG - tig0024129:44570-44589 Msa1414510:intron 30.0%
GCTCGTGATTTATAAAGATA+AGG - tig0024129:44936-44955 Msa1414510:intron 30.0%
CGTGATTTATAAAGATAAGG+CGG - tig0024129:44939-44958 Msa1414510:intron 30.0%
ATTACAGAGCTTATAGCTAA+CGG + tig0024129:44979-44998 None:intergenic 30.0%
AAGTGACACTCATTATGAAA+CGG + tig0024129:45033-45052 None:intergenic 30.0%
!! TTCATAATGAGTGTCACTTT+AGG - tig0024129:45034-45053 Msa1414510:intron 30.0%
!! TCATAATGAGTGTCACTTTA+GGG - tig0024129:45035-45054 Msa1414510:intron 30.0%
! GAAAATTCTGAGAGAAAAGT+TGG + tig0024129:45148-45167 None:intergenic 30.0%
TTGGCACATAGATTAAGAAA+TGG + tig0024129:45250-45269 None:intergenic 30.0%
TCTTAATCTATGTGCCAAAA+TGG - tig0024129:45252-45271 Msa1414510:intron 30.0%
ATTGTATCTCAAAGTGAATG+TGG - tig0024129:45465-45484 Msa1414510:intron 30.0%
TTGTATCTCAAAGTGAATGT+GGG - tig0024129:45466-45485 Msa1414510:intron 30.0%
!!! AGCATTTGTCTTTGTTTTGT+CGG - tig0024129:45495-45514 Msa1414510:intron 30.0%
CTTAATTGCTATATTCTGCT+TGG - tig0024129:45530-45549 Msa1414510:intron 30.0%
ACATTCATTCAGCAATTTAG+AGG + tig0024129:45628-45647 None:intergenic 30.0%
GTTCGAAGTATATTCATAGT+TGG - tig0024129:45716-45735 Msa1414510:intron 30.0%
TCACTGCATGATAATAACTA+AGG + tig0024129:45747-45766 None:intergenic 30.0%
! GTTTTACATACACACTGAAA+AGG + tig0024129:45959-45978 None:intergenic 30.0%
TTGGATTAATCTGTTGAACT+TGG - tig0024129:46040-46059 Msa1414510:three_prime_UTR 30.0%
! TATTTGTGCCTTTTATTGTC+TGG - tig0024129:46164-46183 Msa1414510:three_prime_UTR 30.0%
GAAAAGATCCAGACAATAAA+AGG + tig0024129:46175-46194 None:intergenic 30.0%
CTTATGTTTACGCTAATACT+TGG - tig0024129:46198-46217 Msa1414510:three_prime_UTR 30.0%
! GTATTTTTCATCACTGATAC+TGG - tig0024129:46494-46513 Msa1414510:three_prime_UTR 30.0%
TCAATGCCAAAACTAAGTAT+TGG - tig0024129:46606-46625 Msa1414510:three_prime_UTR 30.0%
CTCATACTTTGCATTCAATT+TGG - tig0024129:46668-46687 Msa1414510:three_prime_UTR 30.0%
ATTTGGTATAAAACTGCTTG+TGG - tig0024129:46685-46704 Msa1414510:three_prime_UTR 30.0%
! CCATCTTTTCTTTTTCCAAA+TGG + tig0024129:46782-46801 None:intergenic 30.0%
CCATTTGGAAAAAGAAAAGA+TGG - tig0024129:46779-46798 Msa1414510:three_prime_UTR 30.0%
TGGCATCATATACATTCATT+TGG - tig0024129:47002-47021 Msa1414510:three_prime_UTR 30.0%
AACACCTATGAAACTAATCT+GGG + tig0024129:47078-47097 None:intergenic 30.0%
AAACACCTATGAAACTAATC+TGG + tig0024129:47079-47098 None:intergenic 30.0%
TAGTTTCATAGGTGTTTAGA+TGG - tig0024129:47082-47101 Msa1414510:three_prime_UTR 30.0%
!!! CTTTCTTTATTTTCATGGCA+TGG - tig0024129:47282-47301 Msa1414510:three_prime_UTR 30.0%
! AATGATAATGAGAGTGGAAA+GGG + tig0024129:47335-47354 None:intergenic 30.0%
! AATGACAATGATAATGAGAG+TGG + tig0024129:47341-47360 None:intergenic 30.0%
! ATTTAGTTTATGTGAACTGG+GGG - tig0024129:47391-47410 Msa1414510:three_prime_UTR 30.0%
GTACTTTAGGCGATAAAATA+TGG - tig0024129:47415-47434 Msa1414510:CDS 30.0%
ATTAATGCTGTGTGATCAAA+TGG + tig0024129:47617-47636 None:intergenic 30.0%
AAAAATCACCTGCAACAATA+TGG + tig0024129:47762-47781 None:intergenic 30.0%
AGGTAAACTACCATCAAATT+TGG - tig0024129:47795-47814 Msa1414510:CDS 30.0%
AAACTACCATCAAATTTGGT+TGG - tig0024129:47799-47818 Msa1414510:CDS 30.0%
ATCAGAAATTCGTAGTCATA+GGG + tig0024129:47870-47889 None:intergenic 30.0%
TATCAGAAATTCGTAGTCAT+AGG + tig0024129:47871-47890 None:intergenic 30.0%
ACTGGTAGGCTAATTATAAT+AGG - tig0024129:47962-47981 Msa1414510:intron 30.0%
CTGGTAGGCTAATTATAATA+GGG - tig0024129:47963-47982 Msa1414510:intron 30.0%
AAGTAAGGACTAAACTTACA+AGG + tig0024129:48022-48041 None:intergenic 30.0%
! CAAGTTTAGAACACTATGAA+AGG + tig0024129:48325-48344 None:intergenic 30.0%
AACCCATTATAATACACTAG+GGG - tig0024129:48518-48537 Msa1414510:intron 30.0%
ATCCCCTAGTGTATTATAAT+GGG + tig0024129:48523-48542 None:intergenic 30.0%
TATCCCCTAGTGTATTATAA+TGG + tig0024129:48524-48543 None:intergenic 30.0%
!!! TGCCATCATTTTTTTTGGAT+GGG - tig0024129:48570-48589 Msa1414510:intron 30.0%
!! TAGTTTTTGGGCATTAAATG+AGG - tig0024129:48701-48720 Msa1414510:intron 30.0%
!! AGTTTTTGGGCATTAAATGA+GGG - tig0024129:48702-48721 Msa1414510:intron 30.0%
CAAATGAAAGAATTGAACAC+TGG + tig0024129:48791-48810 None:intergenic 30.0%
TCTAAACTATGTCTTGAAAG+TGG - tig0024129:48835-48854 Msa1414510:intron 30.0%
GAATGGTTCATTACTCAAAT+TGG - tig0024129:48913-48932 Msa1414510:intron 30.0%
! TCTAACACTCACTCTTTTAT+TGG - tig0024129:49187-49206 Msa1414510:intron 30.0%
! CTAACACTCACTCTTTTATT+GGG - tig0024129:49188-49207 Msa1414510:intron 30.0%
ACTGTACATACCAAACAAAA+AGG - tig0024129:49340-49359 Msa1414510:intron 30.0%
!! GACTAATTTGCCTTTTTGTT+TGG + tig0024129:49353-49372 None:intergenic 30.0%
TTATTGAGTGGTATCAATGT+AGG + tig0024129:49770-49789 None:intergenic 30.0%
ACTTGGGAGATAAATATATC+AGG + tig0024129:49841-49860 None:intergenic 30.0%
AAGTCAAGTTCAGTTCAATT+GGG + tig0024129:49864-49883 None:intergenic 30.0%
AAGATAAACCCATGTATATC+AGG - tig0024129:49891-49910 Msa1414510:intron 30.0%
AGATAAACCCATGTATATCA+GGG - tig0024129:49892-49911 Msa1414510:intron 30.0%
GTAATTTACCCTGATATACA+TGG + tig0024129:49903-49922 None:intergenic 30.0%
TGCTTGCTTACAAAATTTAG+AGG + tig0024129:49961-49980 None:intergenic 30.0%
ACAAACAATGTTCAGTTGAA+AGG + tig0024129:50002-50021 None:intergenic 30.0%
TCTAAACCTAAAAGGACAAA+CGG + tig0024129:50050-50069 None:intergenic 30.0%
CATTAGAGGCTATTAAAGAA+AGG - tig0024129:50230-50249 Msa1414510:intron 30.0%
!! AACACAAACCTTAGTTCTAA+AGG + tig0024129:50301-50320 None:intergenic 30.0%
AACTAAGGTTTGTGTTCTAT+TGG - tig0024129:50305-50324 Msa1414510:CDS 30.0%
AAGAAAATGCTTCCACAAAA+GGG + tig0024129:50390-50409 None:intergenic 30.0%
TAAGAAAATGCTTCCACAAA+AGG + tig0024129:50391-50410 None:intergenic 30.0%
AATGACTCTATAAGTCTTTG+GGG + tig0024129:50414-50433 None:intergenic 30.0%
CAATGACTCTATAAGTCTTT+GGG + tig0024129:50415-50434 None:intergenic 30.0%
CAAAGACTTATAGAGTCATT+GGG - tig0024129:50414-50433 Msa1414510:five_prime_UTR 30.0%
! TTCTCAAGTTCAAGTTCAAG+TGG + tig0024129:43282-43301 None:intergenic 35.0%
! TGTTTAGAGTAAAACGACAC+CGG - tig0024129:43303-43322 Msa1414510:three_prime_UTR 35.0%
CCGGATTTACTTCAAAAGTT+AGG - tig0024129:43322-43341 Msa1414510:three_prime_UTR 35.0%
TGGAAGACCCGTTATAAATA+TGG + tig0024129:43565-43584 None:intergenic 35.0%
TCTCTCTCTTTAACATCTTC+TGG + tig0024129:43585-43604 None:intergenic 35.0%
AACTTCAAAACCTTTGTCGA+TGG - tig0024129:43604-43623 Msa1414510:intron 35.0%
TGCTGCTAAAGATATTCTTC+AGG - tig0024129:43713-43732 Msa1414510:intron 35.0%
ATGAAGAACAGATTTAGCCT+CGG + tig0024129:43754-43773 None:intergenic 35.0%
ATCTGTTCTTCATACTGAGA+TGG - tig0024129:43761-43780 Msa1414510:intron 35.0%
TTATGTGTCTGTGTCATGTT+TGG - tig0024129:44039-44058 Msa1414510:intron 35.0%
TCAACTATGAATCACGTACA+AGG + tig0024129:44068-44087 None:intergenic 35.0%
TCTCACAATAAGTGCATGTT+TGG - tig0024129:44089-44108 Msa1414510:intron 35.0%
! TAAGTGCATGTTTGGAATGA+CGG - tig0024129:44097-44116 Msa1414510:intron 35.0%
!! TGTGATTTGTTGAAACTCCA+AGG - tig0024129:44152-44171 Msa1414510:intron 35.0%
ATTTGAACAAACCTCTACCT+TGG + tig0024129:44172-44191 None:intergenic 35.0%
! GTAGAGGTTTGTTCAAATCA+TGG - tig0024129:44174-44193 Msa1414510:intron 35.0%
TCTTAGTGCGTGTTTGAATT+CGG + tig0024129:44230-44249 None:intergenic 35.0%
! TTTGTGTTAGTTTACCCATG+TGG + tig0024129:44424-44443 None:intergenic 35.0%
CTAATTGCACTGAACAATAG+TGG + tig0024129:44602-44621 None:intergenic 35.0%
! AGAAAAACCGATATTTTCCG+CGG - tig0024129:44620-44639 Msa1414510:intron 35.0%
TGAATTGGAACATAACTGCT+AGG + tig0024129:44824-44843 None:intergenic 35.0%
TAGCAGTTATGTTCCAATTC+AGG - tig0024129:44823-44842 Msa1414510:intron 35.0%
GTAATTATTGAGGGCAAAGT+TGG + tig0024129:45124-45143 None:intergenic 35.0%
TAATCTATGTGCCAAAATGG+AGG - tig0024129:45255-45274 Msa1414510:intron 35.0%
AATCTATGTGCCAAAATGGA+GGG - tig0024129:45256-45275 Msa1414510:intron 35.0%
!! TTCACAATGAGTGTCGTTTA+AGG + tig0024129:45292-45311 None:intergenic 35.0%
AAACGACACTCATTGTGAAA+TGG - tig0024129:45293-45312 Msa1414510:intron 35.0%
! GGCTTGATATTTTCTCTTGT+TGG - tig0024129:45333-45352 Msa1414510:intron 35.0%
TGCTTTAATCTTGCCTTCTT+TGG + tig0024129:45598-45617 None:intergenic 35.0%
ATGTGTTATGTACATCCTAC+TGG - tig0024129:45652-45671 Msa1414510:intron 35.0%
ACATTAATGAGGAAGAAGTG+AGG - tig0024129:45931-45950 Msa1414510:three_prime_UTR 35.0%
CATTAATGAGGAAGAAGTGA+GGG - tig0024129:45932-45951 Msa1414510:three_prime_UTR 35.0%
ATTAATGAGGAAGAAGTGAG+GGG - tig0024129:45933-45952 Msa1414510:three_prime_UTR 35.0%
TTCTATGCCGTGTCATATAT+TGG - tig0024129:46021-46040 Msa1414510:three_prime_UTR 35.0%
ATCTTCATTTGCTTAAAGCC+AGG + tig0024129:46083-46102 None:intergenic 35.0%
GCAAATGAAGATTATAAGGC+AGG - tig0024129:46091-46110 Msa1414510:three_prime_UTR 35.0%
CAGATGCTCCACAATAAAAA+AGG + tig0024129:46331-46350 None:intergenic 35.0%
!!! CCAATACTTAGTTTTGGCAT+TGG + tig0024129:46558-46577 None:intergenic 35.0%
CCAATGCCAAAACTAAGTAT+TGG - tig0024129:46555-46574 Msa1414510:three_prime_UTR 35.0%
TACTGATAAGTCATTGCTAC+TGG + tig0024129:46842-46861 None:intergenic 35.0%
ATGACTTATCAGTAGCTTGA+AGG - tig0024129:46848-46867 Msa1414510:three_prime_UTR 35.0%
TGACTTATCAGTAGCTTGAA+GGG - tig0024129:46849-46868 Msa1414510:three_prime_UTR 35.0%
AACATGAGCAGTGATGATAA+TGG + tig0024129:46969-46988 None:intergenic 35.0%
TCATGTTAATGAATGCACAG+TGG - tig0024129:46982-47001 Msa1414510:three_prime_UTR 35.0%
TAGATGGCGTTATCATTTGT+AGG - tig0024129:47098-47117 Msa1414510:three_prime_UTR 35.0%
ACAACACATGAACCTAAAGT+TGG + tig0024129:47234-47253 None:intergenic 35.0%
! CAATGATAATGAGAGTGGAA+AGG + tig0024129:47336-47355 None:intergenic 35.0%
AAAACAGGAGGCTAAAAAAG+TGG + tig0024129:47367-47386 None:intergenic 35.0%
! GGATCTAGTTTAAAAAGCCT+GGG + tig0024129:47576-47595 None:intergenic 35.0%
! TGGATCTAGTTTAAAAAGCC+TGG + tig0024129:47577-47596 None:intergenic 35.0%
! TTTTTAAACTAGATCCACCC+TGG - tig0024129:47580-47599 Msa1414510:intron 35.0%
GACAAAGCTTCCTTTCATAA+TGG - tig0024129:47716-47735 Msa1414510:intron 35.0%
! AAGCTTCCTTTCATAATGGA+AGG - tig0024129:47720-47739 Msa1414510:intron 35.0%
AATGGACCTTCCATTATGAA+AGG + tig0024129:47729-47748 None:intergenic 35.0%
TGAAGCAGCCATTGAATTAT+AGG - tig0024129:47842-47861 Msa1414510:CDS 35.0%
! ATAGGGCACCTATAATTCAA+TGG + tig0024129:47853-47872 None:intergenic 35.0%
TTTGTTTGTGTAGAAGTGAC+TGG - tig0024129:47944-47963 Msa1414510:intron 35.0%
! TACAAGGTCGCAATTTTGTA+GGG + tig0024129:48480-48499 None:intergenic 35.0%
! TTACAAGGTCGCAATTTTGT+AGG + tig0024129:48479-48498 None:intergenic 35.0%
AGGTAAGGACTAAACTTACA+AGG - tig0024129:48464-48483 Msa1414510:intron 35.0%
! TTACAAGGTCGCAATTTTGT+AGG - tig0024129:48479-48498 Msa1414510:intron 35.0%
! TACAAGGTCGCAATTTTGTA+GGG - tig0024129:48480-48499 Msa1414510:intron 35.0%
AAAAAAATGATGGCAGGATG+AGG + tig0024129:48565-48584 None:intergenic 35.0%
!!! CATCCTGCCATCATTTTTTT+TGG - tig0024129:48565-48584 Msa1414510:intron 35.0%
CATCCAAAAAAAATGATGGC+AGG + tig0024129:48571-48590 None:intergenic 35.0%
!!! CTGCCATCATTTTTTTTGGA+TGG - tig0024129:48569-48588 Msa1414510:intron 35.0%
TGCCCATCCAAAAAAAATGA+TGG + tig0024129:48575-48594 None:intergenic 35.0%
!! CTCACACACTTTGAGTTTTA+CGG - tig0024129:48657-48676 Msa1414510:intron 35.0%
AGTGGTAGTATTCTTGCAAA+TGG - tig0024129:48853-48872 Msa1414510:intron 35.0%
TGCTGCAACATAATTCTAAG+AGG + tig0024129:49380-49399 None:intergenic 35.0%
AATTATGTTGCAGCAAACCT+TGG - tig0024129:49385-49404 Msa1414510:CDS 35.0%
ATTATGTTGCAGCAAACCTT+GGG - tig0024129:49386-49405 Msa1414510:CDS 35.0%
ACTACTGTGTTCATATGCAT+TGG - tig0024129:49427-49446 Msa1414510:CDS 35.0%
!!! TTTTTTACATTCGCCCAAGT+CGG - tig0024129:49632-49651 Msa1414510:intron 35.0%
GAAGTCAAGTTCAGTTCAAT+TGG + tig0024129:49865-49884 None:intergenic 35.0%
! AGACTTGCTCTAAACCTAAA+AGG + tig0024129:50058-50077 None:intergenic 35.0%
!! TAGCTGTTCCTTTAGAACTA+AGG - tig0024129:50290-50309 Msa1414510:CDS 35.0%
GGAGAAGTTACAACCTTATA+TGG - tig0024129:50326-50345 Msa1414510:CDS 35.0%
TTACAACCTTATATGGAGAG+TGG - tig0024129:50333-50352 Msa1414510:CDS 35.0%
AGAAAATGCTTCCACAAAAG+GGG + tig0024129:50389-50408 None:intergenic 35.0%
CCAATGACTCTATAAGTCTT+TGG + tig0024129:50416-50435 None:intergenic 35.0%
CCAAAGACTTATAGAGTCAT+TGG - tig0024129:50413-50432 Msa1414510:five_prime_UTR 35.0%
!! TGAAGGAAGTACTACCTCTT+CGG + tig0024129:43479-43498 None:intergenic 40.0%
AACTGAGAAGCTTCAAAACC+AGG + tig0024129:43633-43652 None:intergenic 40.0%
TTTCAAAGCCGAAAAGCCTA+TGG - tig0024129:43656-43675 Msa1414510:intron 40.0%
TTCAAAGCCGAAAAGCCTAT+GGG - tig0024129:43657-43676 Msa1414510:intron 40.0%
! AGCAAAACCCATAGGCTTTT+CGG + tig0024129:43667-43686 None:intergenic 40.0%
TTGAAGAGAGCAAAACCCAT+AGG + tig0024129:43675-43694 None:intergenic 40.0%
TTAGCAGCAATAGCTTGATG+AGG + tig0024129:43702-43721 None:intergenic 40.0%
TGAAGAACAGATTTAGCCTC+GGG + tig0024129:43753-43772 None:intergenic 40.0%
TGTCAATGTCGGTATTGTGA+AGG + tig0024129:43921-43940 None:intergenic 40.0%
!! ATCAGCAGAAGTGTCAATGT+CGG + tig0024129:43932-43951 None:intergenic 40.0%
TTGTTGAAACTCCAAGGTAG+AGG - tig0024129:44158-44177 Msa1414510:intron 40.0%
GCTGGGGATTATAATCATAC+TGG - tig0024129:44349-44368 Msa1414510:intron 40.0%
TAGCCTGCATATGGATCATA+CGG + tig0024129:44758-44777 None:intergenic 40.0%
TGTTCCAATTCAGGTGAGAA+TGG - tig0024129:44832-44851 Msa1414510:intron 40.0%
AAAGCCATTCTCACCTGAAT+TGG + tig0024129:44839-44858 None:intergenic 40.0%
GACACTCATTGTGAAATGGA+GGG - tig0024129:45297-45316 Msa1414510:intron 40.0%
AATGGAGGGAGTAGTTGAAA+AGG - tig0024129:45311-45330 Msa1414510:intron 40.0%
ATGGAGGGAGTAGTTGAAAA+GGG - tig0024129:45312-45331 Msa1414510:intron 40.0%
TATCTCAAAGTGAATGTGGG+AGG - tig0024129:45469-45488 Msa1414510:intron 40.0%
ATCTCAAAGTGAATGTGGGA+GGG - tig0024129:45470-45489 Msa1414510:intron 40.0%
CTTGCAACACCCTGTTTATT+GGG - tig0024129:45895-45914 Msa1414510:three_prime_UTR 40.0%
ACCCTGTTTATTGGGAACTT+GGG - tig0024129:45903-45922 Msa1414510:three_prime_UTR 40.0%
TCCCAAGTTCCCAATAAACA+GGG + tig0024129:45907-45926 None:intergenic 40.0%
CTTGGGAGAGAACATTAATG+AGG - tig0024129:45920-45939 Msa1414510:three_prime_UTR 40.0%
TGAAGATTATAAGGCAGGAG+AGG - tig0024129:46096-46115 Msa1414510:three_prime_UTR 40.0%
GGTATCCAATAACCTATTGC+AGG - tig0024129:46219-46238 Msa1414510:three_prime_UTR 40.0%
CACATCCTGCAATAGGTTAT+TGG + tig0024129:46227-46246 None:intergenic 40.0%
CACTATTCACATCCTGCAAT+AGG + tig0024129:46234-46253 None:intergenic 40.0%
!! ATCCCAAGTTCTGGTTCAAT+TGG - tig0024129:46289-46308 Msa1414510:three_prime_UTR 40.0%
TGCCAATTGAACCAGAACTT+GGG + tig0024129:46294-46313 None:intergenic 40.0%
ATGCCAATTGAACCAGAACT+TGG + tig0024129:46295-46314 None:intergenic 40.0%
TTCTCTATTAACCCAGCATC+TGG - tig0024129:46393-46412 Msa1414510:three_prime_UTR 40.0%
TCTCTATTAACCCAGCATCT+GGG - tig0024129:46394-46413 Msa1414510:three_prime_UTR 40.0%
TGGTTTCTCCATTCTGTTGT+AGG - tig0024129:46705-46724 Msa1414510:three_prime_UTR 40.0%
ATTCCTTGCCTACAACAGAA+TGG + tig0024129:46716-46735 None:intergenic 40.0%
AAAAGATGGAACCTACCCTA+TGG - tig0024129:46793-46812 Msa1414510:three_prime_UTR 40.0%
GACTTATCAGTAGCTTGAAG+GGG - tig0024129:46850-46869 Msa1414510:three_prime_UTR 40.0%
! GGCGATGACTTGATAATCAA+TGG + tig0024129:46948-46967 None:intergenic 40.0%
!! GGTTCCCAGATTAGTTTCAT+AGG - tig0024129:47071-47090 Msa1414510:three_prime_UTR 40.0%
TTAGGGATGCTTATCCAAAC+AGG - tig0024129:47193-47212 Msa1414510:three_prime_UTR 40.0%
ATGCTTATCCAAACAGGCAT+TGG - tig0024129:47199-47218 Msa1414510:three_prime_UTR 40.0%
TGGTATCTGCTTCCAACTTT+AGG - tig0024129:47219-47238 Msa1414510:three_prime_UTR 40.0%
AAATGGAGTCATGAATGCCA+GGG + tig0024129:47600-47619 None:intergenic 40.0%
CAATATGGCAGTAGCAGAAA+TGG + tig0024129:47747-47766 None:intergenic 40.0%
!! GCAGGTGATTTTTGTTTGCA+CGG - tig0024129:47769-47788 Msa1414510:intron 40.0%
!! CAGGTGATTTTTGTTTGCAC+GGG - tig0024129:47770-47789 Msa1414510:intron 40.0%
!! GATTTTTGTTTGCACGGGTA+AGG - tig0024129:47775-47794 Msa1414510:intron 40.0%
GACGTTCCAACCAAATTTGA+TGG + tig0024129:47808-47827 None:intergenic 40.0%
AATTTGGTTGGAACGTCTGT+TGG - tig0024129:47811-47830 Msa1414510:CDS 40.0%
TTTGTGTAGAAGTGACTGGT+AGG - tig0024129:47948-47967 Msa1414510:intron 40.0%
AGGGGATAATAGAGTCATTG+TGG - tig0024129:48536-48555 Msa1414510:intron 40.0%
GGGGATAATAGAGTCATTGT+GGG - tig0024129:48537-48556 Msa1414510:intron 40.0%
GGGATAATAGAGTCATTGTG+GGG - tig0024129:48538-48557 Msa1414510:intron 40.0%
!! ACACACTTTGAGTTTTACGG+TGG - tig0024129:48660-48679 Msa1414510:intron 40.0%
ATCACAGTAGACATTTGACG+AGG - tig0024129:49012-49031 Msa1414510:CDS 40.0%
!! GACGACTCTAGAAACTTTTC+TGG + tig0024129:49093-49112 None:intergenic 40.0%
! ATGCTAGCAACACTCTCTTT+TGG - tig0024129:49156-49175 Msa1414510:intron 40.0%
! TGCTAGCAACACTCTCTTTT+GGG - tig0024129:49157-49176 Msa1414510:intron 40.0%
CTAATTTACGTTGAGTCCCA+AGG + tig0024129:49405-49424 None:intergenic 40.0%
! TTTTTACATTCGCCCAAGTC+GGG - tig0024129:49633-49652 Msa1414510:intron 40.0%
TATGTCCCACCACTTTATGT+GGG - tig0024129:49724-49743 Msa1414510:intron 40.0%
GAAATGGAACCCACATAAAG+TGG + tig0024129:49736-49755 None:intergenic 40.0%
ATCAATGTAGGACACCACTT+TGG + tig0024129:49758-49777 None:intergenic 40.0%
! GCACTCACTCTTTTATTGAG+TGG + tig0024129:49782-49801 None:intergenic 40.0%
GTTCAGTTCAATTGGGACTT+GGG + tig0024129:49857-49876 None:intergenic 40.0%
AGTTCAGTTCAATTGGGACT+TGG + tig0024129:49858-49877 None:intergenic 40.0%
GGACAAACGGTTGTTGAAAA+TGG + tig0024129:50037-50056 None:intergenic 40.0%
! CAACAACCGTTTGTCCTTTT+AGG - tig0024129:50041-50060 Msa1414510:CDS 40.0%
! GTTTAGAGCAAGTCTTGCTT+TGG - tig0024129:50063-50082 Msa1414510:CDS 40.0%
! CCTCTAATGTCGTTTCACAT+CGG + tig0024129:50219-50238 None:intergenic 40.0%
!! AGTTCTAAAGGAACAGCTAG+TGG + tig0024129:50289-50308 None:intergenic 40.0%
GATTCATTCATGGCAGCCAA+CGG - tig0024129:43373-43392 Msa1414510:three_prime_UTR 45.0%
GGAAGAAGGAGAAGGAATAG+CGG + tig0024129:43458-43477 None:intergenic 45.0%
AGTACTACCTCTTCGGAAGA+AGG + tig0024129:43472-43491 None:intergenic 45.0%
AACCTTTGTCGATGGTTACC+TGG - tig0024129:43612-43631 Msa1414510:intron 45.0%
AACCAGGTAACCATCGACAA+AGG + tig0024129:43617-43636 None:intergenic 45.0%
!! GGATATGCTTTTTGATCCCG+AGG - tig0024129:43734-43753 Msa1414510:intron 45.0%
GACATTGACACTTCTGCTGA+TGG - tig0024129:43931-43950 Msa1414510:intron 45.0%
AGTAAACGGTTACGAACAGC+TGG - tig0024129:44331-44350 Msa1414510:intron 45.0%
GTAAACGGTTACGAACAGCT+GGG - tig0024129:44332-44351 Msa1414510:intron 45.0%
TAAACGGTTACGAACAGCTG+GGG - tig0024129:44333-44352 Msa1414510:intron 45.0%
TTGCAGACCGCGGAAAATAT+CGG + tig0024129:44630-44649 None:intergenic 45.0%
ATGTTGACAATTGCAGACCG+CGG + tig0024129:44640-44659 None:intergenic 45.0%
GAGCTCAAAATTGCACACGA+AGG + tig0024129:44920-44939 None:intergenic 45.0%
! TTGTCTTTCGCCCTCCATTT+TGG + tig0024129:45269-45288 None:intergenic 45.0%
CGACACTCATTGTGAAATGG+AGG - tig0024129:45296-45315 Msa1414510:intron 45.0%
ACTGTCCTTGAAGTCCTGAA+CGG - tig0024129:45424-45443 Msa1414510:intron 45.0%
TCTCAAAGTGAATGTGGGAG+GGG - tig0024129:45471-45490 Msa1414510:intron 45.0%
!! TAAACAGGGTGTTGCAAGGA+GGG + tig0024129:45893-45912 None:intergenic 45.0%
!! ATAAACAGGGTGTTGCAAGG+AGG + tig0024129:45894-45913 None:intergenic 45.0%
!! CCAATAAACAGGGTGTTGCA+AGG + tig0024129:45897-45916 None:intergenic 45.0%
CCTTGCAACACCCTGTTTAT+TGG - tig0024129:45894-45913 Msa1414510:three_prime_UTR 45.0%
CACCCTGTTTATTGGGAACT+TGG - tig0024129:45902-45921 Msa1414510:three_prime_UTR 45.0%
CTCCCAAGTTCCCAATAAAC+AGG + tig0024129:45908-45927 None:intergenic 45.0%
GAACAGAAGAGCTGTGTCAA+AGG + tig0024129:45986-46005 None:intergenic 45.0%
GCTTTGTAATGCAGACAACC+TGG - tig0024129:46062-46081 Msa1414510:three_prime_UTR 45.0%
AAATGTGCACCACAATCTGC+AGG - tig0024129:46258-46277 Msa1414510:three_prime_UTR 45.0%
AATGTGCACCACAATCTGCA+GGG - tig0024129:46259-46278 Msa1414510:three_prime_UTR 45.0%
!! GTTCTGGTTCAATTGGCATG+CGG - tig0024129:46296-46315 Msa1414510:three_prime_UTR 45.0%
CTCTATTAACCCAGCATCTG+GGG - tig0024129:46395-46414 Msa1414510:three_prime_UTR 45.0%
AGTCATAAACCCCAGATGCT+GGG + tig0024129:46407-46426 None:intergenic 45.0%
! AGCATCTGGGGTTTATGACT+GGG - tig0024129:46407-46426 Msa1414510:three_prime_UTR 45.0%
TCTCCATTCTGTTGTAGGCA+AGG - tig0024129:46710-46729 Msa1414510:three_prime_UTR 45.0%
CATTTATCGGCAGCATGTGT+TGG - tig0024129:47050-47069 Msa1414510:three_prime_UTR 45.0%
AGCAGATACCAATGCCTGTT+TGG + tig0024129:47210-47229 None:intergenic 45.0%
ATGAGAGTGGAAAGGGTAGA+TGG + tig0024129:47328-47347 None:intergenic 45.0%
!! GTCTTCTAAAGTACACTCCC+AGG - tig0024129:47556-47575 Msa1414510:intron 45.0%
CAAATGGAGTCATGAATGCC+AGG + tig0024129:47601-47620 None:intergenic 45.0%
TGCTACTGCCATATTGTTGC+AGG - tig0024129:47751-47770 Msa1414510:intron 45.0%
AATTTGTCTGGTCCCGACTT+GGG + tig0024129:49648-49667 None:intergenic 45.0%
AAATTTGTCTGGTCCCGACT+TGG + tig0024129:49649-49668 None:intergenic 45.0%
GTATGTCCCACCACTTTATG+TGG - tig0024129:49723-49742 Msa1414510:intron 45.0%
TGGAACCCACATAAAGTGGT+GGG + tig0024129:49732-49751 None:intergenic 45.0%
ATGGAACCCACATAAAGTGG+TGG + tig0024129:49733-49752 None:intergenic 45.0%
TGTGGGTTCCATTTCCAAAG+TGG - tig0024129:49741-49760 Msa1414510:intron 45.0%
! GTAGGACACCACTTTGGAAA+TGG + tig0024129:49752-49771 None:intergenic 45.0%
CCGATGTGAAACGACATTAG+AGG - tig0024129:50216-50235 Msa1414510:intron 45.0%
ACACTGCCACTCTCCATATA+AGG + tig0024129:50342-50361 None:intergenic 45.0%
! GATCCTATTAGCCCCTTTTG+TGG - tig0024129:50375-50394 Msa1414510:exon 45.0%
CTTCCACAAAAGGGGCTAAT+AGG + tig0024129:50381-50400 None:intergenic 45.0%
!!! ATAATAAGATAATAATTTTT+CGG + tig0024129:49595-49614 None:intergenic 5.0%
GAAGGAGAAGGAATAGCGGT+GGG + tig0024129:43454-43473 None:intergenic 50.0%
AGAAGGAGAAGGAATAGCGG+TGG + tig0024129:43455-43474 None:intergenic 50.0%
TCCTTCTCCTTCTTCCGAAG+AGG - tig0024129:43462-43481 Msa1414510:three_prime_UTR 50.0%
ACCTCTTCGGAAGAAGGAGA+AGG + tig0024129:43466-43485 None:intergenic 50.0%
TATGGATCATACGGAGGAGG+AGG + tig0024129:44749-44768 None:intergenic 50.0%
GCATATGGATCATACGGAGG+AGG + tig0024129:44752-44771 None:intergenic 50.0%
CCTGCATATGGATCATACGG+AGG + tig0024129:44755-44774 None:intergenic 50.0%
CCTCCGTATGATCCATATGC+AGG - tig0024129:44752-44771 Msa1414510:intron 50.0%
GCAACAGGATAGCCTGCATA+TGG + tig0024129:44767-44786 None:intergenic 50.0%
!! GGCATTGGTACTTGTGCAAC+AGG + tig0024129:44782-44801 None:intergenic 50.0%
ATAGACACAGGAGCAGGCAT+TGG + tig0024129:44797-44816 None:intergenic 50.0%
CTGCTAGGTGAGATAGACAC+AGG + tig0024129:44809-44828 None:intergenic 50.0%
CTGTCCTTGAAGTCCTGAAC+GGG - tig0024129:45425-45444 Msa1414510:intron 50.0%
TAACAGCACCCTGCAGATTG+TGG + tig0024129:46270-46289 None:intergenic 50.0%
!! GGTGCTGTTATCCCAAGTTC+TGG - tig0024129:46280-46299 Msa1414510:three_prime_UTR 50.0%
CAGTCATAAACCCCAGATGC+TGG + tig0024129:46408-46427 None:intergenic 50.0%
! CAGCATCTGGGGTTTATGAC+TGG - tig0024129:46406-46425 Msa1414510:three_prime_UTR 50.0%
CATTGCTACTGGAGCTCCAT+TGG + tig0024129:46831-46850 None:intergenic 50.0%
! CGTTTCACATCGGCCTGTTT+TGG + tig0024129:50209-50228 None:intergenic 50.0%
TCCACCCTTACCACCAGCAA+TGG - tig0024129:43398-43417 Msa1414510:three_prime_UTR 55.0%
GAGGCCATTGCTGGTGGTAA+GGG + tig0024129:43405-43424 None:intergenic 55.0%
!! GAAGGAATAGCGGTGGGTTG+AGG + tig0024129:43448-43467 None:intergenic 55.0%
CTGCTGATGGCAGATGTGTC+TGG - tig0024129:43944-43963 Msa1414510:intron 55.0%
GGCGGAGGATGAAAAGGAGA+CGG + tig0024129:44385-44404 None:intergenic 55.0%
CACCTGTTTGGGGACCACAT+GGG - tig0024129:44407-44426 Msa1414510:intron 55.0%
TACCCATGTGGTCCCCAAAC+AGG + tig0024129:44412-44431 None:intergenic 55.0%
GGTGAGATAGACACAGGAGC+AGG + tig0024129:44803-44822 None:intergenic 55.0%
TGTGCCCGTTCAGGACTTCA+AGG + tig0024129:45432-45451 None:intergenic 55.0%
GAACTCTTCTGTGCCCGTTC+AGG + tig0024129:45441-45460 None:intergenic 55.0%
ACCTACCCTATGGCTGTTCC+TGG - tig0024129:46803-46822 Msa1414510:three_prime_UTR 55.0%
ACCAGGAACAGCCATAGGGT+AGG + tig0024129:46807-46826 None:intergenic 55.0%
TGGCACCAGGAACAGCCATA+GGG + tig0024129:46811-46830 None:intergenic 55.0%
TTGGCACCAGGAACAGCCAT+AGG + tig0024129:46812-46831 None:intergenic 55.0%
! ATGGCTGTTCCTGGTGCCAA+TGG - tig0024129:46812-46831 Msa1414510:three_prime_UTR 55.0%
! GTGAACTGGGGGCGTACTTT+AGG - tig0024129:47402-47421 Msa1414510:exon 55.0%
TGGAGTCATGAATGCCAGGG+TGG + tig0024129:47597-47616 None:intergenic 55.0%
ACAGCTAGTGGCGTTTGAGG+TGG + tig0024129:50277-50296 None:intergenic 55.0%
GGAACAGCTAGTGGCGTTTG+AGG + tig0024129:50280-50299 None:intergenic 55.0%
GTGGTAAGGGTGGATGCCGT+TGG + tig0024129:43392-43411 None:intergenic 60.0%
GCCATTGCTGGTGGTAAGGG+TGG + tig0024129:43402-43421 None:intergenic 60.0%
GGAGGCCATTGCTGGTGGTA+AGG + tig0024129:43406-43425 None:intergenic 60.0%
!! ATAGCGGTGGGTTGAGGAGG+AGG + tig0024129:43442-43461 None:intergenic 60.0%
!! GGAATAGCGGTGGGTTGAGG+AGG + tig0024129:43445-43464 None:intergenic 60.0%
!! GGTGGTGGCGGAGGATGAAA+AGG + tig0024129:44391-44410 None:intergenic 60.0%
ATCCTCCGCCACCACCTGTT+TGG - tig0024129:44395-44414 Msa1414510:intron 60.0%
TCCTCCGCCACCACCTGTTT+GGG - tig0024129:44396-44415 Msa1414510:intron 60.0%
TGTGGTCCCCAAACAGGTGG+TGG + tig0024129:44406-44425 None:intergenic 60.0%
CCATGTGGTCCCCAAACAGG+TGG + tig0024129:44409-44428 None:intergenic 60.0%
CCACCTGTTTGGGGACCACA+TGG - tig0024129:44406-44425 Msa1414510:intron 60.0%
TCATACGGAGGAGGAGGTGG+TGG + tig0024129:44743-44762 None:intergenic 60.0%
GGATCATACGGAGGAGGAGG+TGG + tig0024129:44746-44765 None:intergenic 60.0%
ACTGGAGCTCCATTGGCACC+AGG + tig0024129:46824-46843 None:intergenic 60.0%
TTGAGGAGGAGGAGGAGCGG+CGG + tig0024129:43431-43450 None:intergenic 65.0%
GGGTTGAGGAGGAGGAGGAG+CGG + tig0024129:43434-43453 None:intergenic 65.0%
CCTCCGCCACCACCTGTTTG+GGG - tig0024129:44397-44416 Msa1414510:intron 65.0%
! GGTCCCCAAACAGGTGGTGG+CGG + tig0024129:44403-44422 None:intergenic 65.0%
!! GCGGTGGGTTGAGGAGGAGG+AGG + tig0024129:43439-43458 None:intergenic 70.0%
!! CCCCAAACAGGTGGTGGCGG+AGG + tig0024129:44400-44419 None:intergenic 70.0%
CGGCGGGAGGCCATTGCTGG+TGG + tig0024129:43411-43430 None:intergenic 75.0%
AGGAGGAGGAGGAGCGGCGG+CGG + tig0024129:43428-43447 None:intergenic 75.0%
! CGGCGGCGGGAGGCCATTGC+TGG + tig0024129:43414-43433 None:intergenic 80.0%
! GGAGGAGGAGGAGCGGCGGC+GGG + tig0024129:43427-43446 None:intergenic 80.0%
! GGAGGAGGAGCGGCGGCGGG+AGG + tig0024129:43424-43443 None:intergenic 85.0%
Chromosome Type Strat End Strand Name
tig0024129 gene 43218 50544 43218 ID=Msa1414510;Name=Msa1414510
tig0024129 mRNA 43218 50544 43218 ID=Msa1414510-mRNA-1;Parent=Msa1414510;Name=Msa1414510-mRNA-1;_AED=0.09;_eAED=0.09;_QI=164|0.71|0.87|1|0.85|0.75|8|1880|274
tig0024129 exon 43218 43547 43218 ID=Msa1414510-mRNA-1:exon:21862;Parent=Msa1414510-mRNA-1
tig0024129 exon 45861 47521 45861 ID=Msa1414510-mRNA-1:exon:21861;Parent=Msa1414510-mRNA-1
tig0024129 exon 47617 47686 47617 ID=Msa1414510-mRNA-1:exon:21860;Parent=Msa1414510-mRNA-1
tig0024129 exon 47795 47886 47795 ID=Msa1414510-mRNA-1:exon:21859;Parent=Msa1414510-mRNA-1
tig0024129 exon 48918 49032 48918 ID=Msa1414510-mRNA-1:exon:21858;Parent=Msa1414510-mRNA-1
tig0024129 exon 49379 49457 49379 ID=Msa1414510-mRNA-1:exon:21857;Parent=Msa1414510-mRNA-1
tig0024129 exon 49952 50207 49952 ID=Msa1414510-mRNA-1:exon:21856;Parent=Msa1414510-mRNA-1
tig0024129 exon 50279 50544 50279 ID=Msa1414510-mRNA-1:exon:21855;Parent=Msa1414510-mRNA-1
tig0024129 five_prime_UTR 50381 50544 50381 ID=Msa1414510-mRNA-1:five_prime_utr;Parent=Msa1414510-mRNA-1
tig0024129 CDS 50279 50380 50279 ID=Msa1414510-mRNA-1:cds;Parent=Msa1414510-mRNA-1
tig0024129 CDS 49952 50207 49952 ID=Msa1414510-mRNA-1:cds;Parent=Msa1414510-mRNA-1
tig0024129 CDS 49379 49457 49379 ID=Msa1414510-mRNA-1:cds;Parent=Msa1414510-mRNA-1
tig0024129 CDS 48918 49032 48918 ID=Msa1414510-mRNA-1:cds;Parent=Msa1414510-mRNA-1
tig0024129 CDS 47795 47886 47795 ID=Msa1414510-mRNA-1:cds;Parent=Msa1414510-mRNA-1
tig0024129 CDS 47617 47686 47617 ID=Msa1414510-mRNA-1:cds;Parent=Msa1414510-mRNA-1
tig0024129 CDS 47411 47521 47411 ID=Msa1414510-mRNA-1:cds;Parent=Msa1414510-mRNA-1
tig0024129 three_prime_UTR 45861 47410 45861 ID=Msa1414510-mRNA-1:three_prime_utr;Parent=Msa1414510-mRNA-1
tig0024129 three_prime_UTR 43218 43547 43218 ID=Msa1414510-mRNA-1:three_prime_utr;Parent=Msa1414510-mRNA-1
Gene Sequence

>Msa1414510

ATGGCAGCCAACGGCATCCACCCTTACCACCAGCAATGGCCTCCCGCCGCCGCTCCTCCTCCTCCTCAACCCACCGCTATTCCTTCTCCTTCTTCCGAAGAGGTTCGAACCATATTTATAACGGGTCTTCCAGAAGATGTTAAAGAGAGAGAACTTCAAAACCTTTGTCGATGGTTACCTGGTTTTGAAGCTTCTCAGTTGAATTTCAAAGCCGAAAAGCCTATGGGTTTTGCTCTCTTCAATTCTCCTCATCAAGCTATTGCTGCTAAAGATATTCTTCAGGATATGCTTTTTGATCCCGAGGCTAAATCTGTTCTTCATACTGAGATGGCTAAGAAAAATCTCTTTGTTAAACGAGGAGCTGATGCAGTTGCTTTTGATCAAAGTAAACGGTTACGAACAGCTGGGGATTATAATCATACTGGTTATGTAACTCCATATATGGCTCCACCACCTCCTCCTCCGTATGATCCATATGCAGGCTATCCTGTTGCACAAGTACCAATGCCTGCTCCTGTGTCTATCTCACCTAGCAGTTATGTTCCAATTCAGAACACTAAAGATAACCCTCCTTGCAACACCCTGTTTATTGGGAACTTGGGAGAGAACATTAATGAGGAAGAAGTGAGGGGCCTTTTCAGTGTACAACCTGGCTTTAAGCAAATGAAGATTATAAGGCAGGAGAGGCATACAGTTTGCTTCATTGAGTTTGAAGATGTGAATAGTGCTACAAATGTGCACCACAATCTGCAGGGTGCTGTTATCCCAAGTTCTGGTTCAATTGGCATGCGGATACAATATCCTTTTTTATTGTGGAGCATCTGA
Protein sequence

>Msa1414510

MAANGIHPYHQQWPPAAAPPPPQPTAIPSPSSEEVRTIFITGLPEDVKERELQNLCRWLPGFEASQLNFKAEKPMGFALFNSPHQAIAAKDILQDMLFDPEAKSVLHTEMAKKNLFVKRGADAVAFDQSKRLRTAGDYNHTGYVTPYMAPPPPPPYDPYAGYPVAQVPMPAPVSISPSSYVPIQNTKDNPPCNTLFIGNLGENINEEEVRGLFSVQPGFKQMKIIRQERHTVCFIEFEDVNSATNVHHNLQGAVIPSSGSIGMRIQYPFLLWSI*