Alfalfa Gene Editing Database
Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|
Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
Msa1417300 | sp|O82413|SYHM_ARATH | 72.929 | 495 | 114 | 5 | 9 | 494 | 3 | 486 | 0.0 | 719 |
Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
Msa1417300 | A0A396HB84 | 96.806 | 501 | 9 | 1 | 1 | 494 | 27 | 527 | 0.0 | 988 |
Gene ID | Type | Classification |
---|
Gene ID | Type | Classification |
---|
Co-expression Network
Gene1 | Gene2 | correlation coefficient | p_value | FDR |
---|---|---|---|---|
Msa0081400 | Msa1417300 | 0.836715 | 7.953569e-57 | -8.615850e-47 |
Msa0623470 | Msa1417300 | 0.819201 | 1.315040e-52 | -8.615850e-47 |
Msa0689880 | Msa1417300 | 0.887572 | 1.268321e-72 | -8.615850e-47 |
Msa0141770 | Msa1417300 | 0.835244 | 1.878287e-56 | -8.615850e-47 |
Msa0429490 | Msa1417300 | 0.820700 | 5.971991e-53 | -8.615850e-47 |
Msa0429560 | Msa1417300 | 0.828837 | 7.198813e-55 | -8.615850e-47 |
Msa1118390 | Msa1417300 | 0.814258 | 1.688577e-51 | -8.615850e-47 |
Msa1124260 | Msa1417300 | 0.991081 | 8.592413e-186 | -8.615850e-47 |
PPI
Gene1 | Gene2 | Type |
---|
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
Msa1417300 | MtrunA17_Chr7g0264611 | 96.806 | 501 | 9 | 1 | 1 | 494 | 27 | 527 | 0.0 | 988 |
Msa1417300 | MtrunA17_Chr1g0177811 | 28.306 | 431 | 271 | 13 | 87 | 490 | 434 | 853 | 1.80e-37 | 146 |
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
Msa1417300 | AT3G46100.1 | 72.929 | 495 | 114 | 5 | 9 | 494 | 3 | 486 | 0.0 | 719 |
Msa1417300 | AT5G03406.1 | 74.797 | 246 | 52 | 3 | 20 | 265 | 15 | 250 | 8.22e-127 | 370 |
Msa1417300 | AT3G02760.2 | 28.941 | 425 | 266 | 12 | 87 | 485 | 449 | 863 | 6.53e-35 | 139 |
Msa1417300 | AT3G02760.1 | 28.941 | 425 | 266 | 12 | 87 | 485 | 449 | 863 | 6.53e-35 | 139 |
Find 158 sgRNAs with CRISPR-Local
Find 703 sgRNAs with CRISPR-GE
CRISPR-Local
sgRNA_sequence | on_target_score | Position | Region |
---|---|---|---|
AGAATCAGATGTTGGATTTA+AGG | 0.120058 | tig0024468:-20623 | Msa1417300:CDS |
GACATTCCTGCTTGTGGTTT+TGG | 0.175515 | tig0024468:-17623 | Msa1417300:CDS |
ATCTTTAGTATGGTAGATTA+TGG | 0.241709 | tig0024468:+15524 | None:intergenic |
GATCATTTGTTCTCAACTTT+TGG | 0.257033 | tig0024468:-17653 | Msa1417300:CDS |
TGGAAAGCAAACCACTTAAA+TGG | 0.268229 | tig0024468:-16356 | Msa1417300:intron |
GAAAGCAGGAGAGGAGATTA+AGG | 0.268692 | tig0024468:-24001 | Msa1417300:CDS |
GCCTGAACTTACTCCTTCTT+TGG | 0.276143 | tig0024468:-21489 | Msa1417300:CDS |
ATGAAGAACGAACACGAAAA+TGG | 0.276211 | tig0024468:+24610 | None:intergenic |
GCTAACATTCTCAGAGAAAA+AGG | 0.300441 | tig0024468:-16399 | Msa1417300:CDS |
ATGGATATAATTGGTGTTCC+TGG | 0.307425 | tig0024468:-21184 | Msa1417300:CDS |
TGATTAAAGTTGGAGGTTTA+CGG | 0.309047 | tig0024468:-15502 | Msa1417300:three_prime_UTR |
AACTTTAATCATCTTTAGTA+TGG | 0.309556 | tig0024468:+15514 | None:intergenic |
ACAGAGTGTTGACTTAGTTT+TGG | 0.312626 | tig0024468:-16376 | Msa1417300:CDS |
AATTGGTGTTCCTGGGGTTA+TGG | 0.319193 | tig0024468:-21176 | Msa1417300:intron |
TTGCGCAATCGCATTTCTTC+GGG | 0.327261 | tig0024468:+24340 | None:intergenic |
TTCTCACTGGCTGAAAAGTT+TGG | 0.332656 | tig0024468:-18637 | Msa1417300:CDS |
AAGAAATGCGATTGCGCAAT+TGG | 0.335227 | tig0024468:-24336 | Msa1417300:CDS |
TCAATACCTGAAAATATGTT+TGG | 0.341014 | tig0024468:-19880 | Msa1417300:CDS |
TCTTTCTTTATCTCATCAAC+TGG | 0.341364 | tig0024468:+19439 | None:intergenic |
CAGTGGAATATGGATATAAT+TGG | 0.342819 | tig0024468:-21193 | Msa1417300:CDS |
ATTGCGCAATCGCATTTCTT+CGG | 0.343207 | tig0024468:+24339 | None:intergenic |
TCTACCAGCGGCGGCCGGTC+TGG | 0.350165 | tig0024468:-24445 | Msa1417300:CDS |
TTACACTGGCATTGTCTTTG+AGG | 0.365282 | tig0024468:-18563 | Msa1417300:intron |
TGCATCAAGTTGAAGCCATT+TGG | 0.368293 | tig0024468:+18609 | None:intergenic |
TACTCCTTCTTTGGCAAGGC+TGG | 0.376352 | tig0024468:-21480 | Msa1417300:CDS |
TGAGCACTACCAGTGGAATA+TGG | 0.383829 | tig0024468:-21203 | Msa1417300:CDS |
GTTACTTTCTTCAAACGAAT+AGG | 0.386013 | tig0024468:-20652 | Msa1417300:CDS |
AAAAGTTTGGTTACTCCAAA+TGG | 0.391232 | tig0024468:-18624 | Msa1417300:CDS |
AGTCCGAGGCATTGTTCGTT+AGG | 0.406959 | tig0024468:-24023 | Msa1417300:CDS |
TTCTGAACTTCGCCGGTGAC+CGG | 0.418243 | tig0024468:+24403 | None:intergenic |
AGTTCTTTCTGTAAAGTCAT+TGG | 0.420094 | tig0024468:-19368 | Msa1417300:CDS |
AAGTCATTGGCCGAGTTAGA+AGG | 0.420903 | tig0024468:-19355 | Msa1417300:intron |
TAGAATCGGTCTCGGCCGCT+TGG | 0.423947 | tig0024468:+24464 | None:intergenic |
CAGACGCTCAGCATTTGTTC+TGG | 0.424717 | tig0024468:+15863 | None:intergenic |
CAGAACAAATGCTGAGCGTC+TGG | 0.438474 | tig0024468:-15862 | Msa1417300:CDS |
ATAGAGCACTATGCTCAATA+AGG | 0.443078 | tig0024468:-15629 | Msa1417300:three_prime_UTR |
TAGCTCGGAGCTTTCCTTCA+CGG | 0.452781 | tig0024468:+17696 | None:intergenic |
AGAATCGGTCTCGGCCGCTT+GGG | 0.454590 | tig0024468:+24465 | None:intergenic |
GTCAAGGTTGTACGGATTTG+AGG | 0.457736 | tig0024468:-24067 | Msa1417300:CDS |
GCTGAGCGTCTGGTATTAGT+AGG | 0.457765 | tig0024468:-15852 | Msa1417300:CDS |
AGGAAATTCTGAGTGGCAAA+GGG | 0.459110 | tig0024468:-15832 | Msa1417300:CDS |
GAACACGAAAATGGAGTTGC+AGG | 0.459319 | tig0024468:+24619 | None:intergenic |
TGGATATAATTGGTGTTCCT+GGG | 0.461663 | tig0024468:-21183 | Msa1417300:CDS |
CCGGCCGCCGCTGGTAGAAT+CGG | 0.466117 | tig0024468:+24450 | None:intergenic |
AACTTACTCCTTCTTTGGCA+AGG | 0.466158 | tig0024468:-21484 | Msa1417300:CDS |
CTTGATGCATCAGTTGTTCG+TGG | 0.466479 | tig0024468:-18595 | Msa1417300:CDS |
AGGATTTCATACCATTTAAG+TGG | 0.467027 | tig0024468:+16345 | None:intergenic |
AAGAAAGAGTTGAAAGCTCT+TGG | 0.471584 | tig0024468:-19424 | Msa1417300:CDS |
TAGAGAGGCTCGGAGGGAGT+GGG | 0.473809 | tig0024468:-18687 | Msa1417300:CDS |
ATACTAAAGATGATTAAAGT+TGG | 0.475435 | tig0024468:-15512 | Msa1417300:three_prime_UTR |
TTAGAGAGGCTCGGAGGGAG+TGG | 0.476279 | tig0024468:-18688 | Msa1417300:intron |
TGCAAGAGAGTTGGATAGGG+AGG | 0.476440 | tig0024468:+24684 | None:intergenic |
GCATTGTTCGTTAGGAAAGC+AGG | 0.476537 | tig0024468:-24015 | Msa1417300:CDS |
GGGAAATCACGCGTACCCTT+AGG | 0.477420 | tig0024468:+24364 | None:intergenic |
GAAATGCAAGAGAGTTGGAT+AGG | 0.478934 | tig0024468:+24680 | None:intergenic |
ACATAACATTGTTTGTGCCT+TGG | 0.480651 | tig0024468:-16454 | Msa1417300:CDS |
CGTGGCCTTGCTTATTACAC+TGG | 0.483778 | tig0024468:-18577 | Msa1417300:CDS |
TTCTGAGTGGCAAAGGGGTA+TGG | 0.491732 | tig0024468:-15826 | Msa1417300:CDS |
TCTATCACAGGAGGCTGTCC+AGG | 0.492263 | tig0024468:-19401 | Msa1417300:CDS |
GTGGAGGGTTTGACATTGAA+AGG | 0.493937 | tig0024468:+24511 | None:intergenic |
GCCGCTGGTAGAATCGGTCT+CGG | 0.496944 | tig0024468:+24456 | None:intergenic |
TGCGTTGTCTCCTACTCCTC+CGG | 0.498407 | tig0024468:-24422 | Msa1417300:CDS |
CGTGTCAAAATTCTCTCCAC+TGG | 0.500301 | tig0024468:-15801 | Msa1417300:CDS |
CGATGGAAATGCAAGAGAGT+TGG | 0.501234 | tig0024468:+24675 | None:intergenic |
ACTTCAAGGGTGTGCTGCTA+TGG | 0.501860 | tig0024468:-16424 | Msa1417300:CDS |
GCTGATGACATTCCTGCTTG+TGG | 0.502207 | tig0024468:-17629 | Msa1417300:CDS |
GCCAAAGAAGGAGTAAGTTC+AGG | 0.503115 | tig0024468:+21488 | None:intergenic |
ACCTGAAAATATGTTTGGCA+AGG | 0.503204 | tig0024468:-19875 | Msa1417300:intron |
GGAACGGTGAAGAGGAGAGT+TGG | 0.503980 | tig0024468:+24533 | None:intergenic |
AAAGAACTTGCAATAGCTCC+TGG | 0.505194 | tig0024468:+19383 | None:intergenic |
CTAAAGATGATTAAAGTTGG+AGG | 0.506612 | tig0024468:-15509 | Msa1417300:three_prime_UTR |
CTCCGAGCTATCTGTGGTGG+TGG | 0.506968 | tig0024468:-17683 | Msa1417300:CDS |
TGTACTTGCAAGCTGAGCTC+TGG | 0.507893 | tig0024468:+16474 | None:intergenic |
CGCACCAGACCGGCCGCCGC+TGG | 0.512867 | tig0024468:+24441 | None:intergenic |
CCAACAGTGAACCACTTCAA+TGG | 0.513257 | tig0024468:+21268 | None:intergenic |
GGAATTACAGAATCAGATGT+TGG | 0.513279 | tig0024468:-20631 | Msa1417300:CDS |
AATGCCTCGGACTCAAGCAC+TGG | 0.516330 | tig0024468:+24033 | None:intergenic |
ATCACCAGCCTTGCCAAAGA+AGG | 0.517000 | tig0024468:+21476 | None:intergenic |
CGCAATCGCATTTCTTCGGG+CGG | 0.522443 | tig0024468:+24343 | None:intergenic |
AGAGAGGCTCGGAGGGAGTG+GGG | 0.527244 | tig0024468:-18686 | Msa1417300:CDS |
CAACAGTTGCTCAGAGAGAA+GGG | 0.528047 | tig0024468:-16504 | Msa1417300:intron |
CCATTGAAGTGGTTCACTGT+TGG | 0.531184 | tig0024468:-21268 | Msa1417300:CDS |
TAGGAAATTCTGAGTGGCAA+AGG | 0.533148 | tig0024468:-15833 | Msa1417300:CDS |
AGGAGAGGAGATTAAGGACC+AGG | 0.533987 | tig0024468:-23995 | Msa1417300:intron |
GCAACAGTTGCTCAGAGAGA+AGG | 0.536005 | tig0024468:-16505 | Msa1417300:intron |
GCAAGGCTGGTGATACAGAA+AGG | 0.536792 | tig0024468:-21467 | Msa1417300:CDS |
TCTCCTACTCCTCCGGTCAC+CGG | 0.544407 | tig0024468:-24415 | Msa1417300:CDS |
AATCGACGTGAATCCTCCTA+AGG | 0.547709 | tig0024468:-24380 | Msa1417300:CDS |
TGGAGGGTTTGACATTGAAA+GGG | 0.551825 | tig0024468:+24512 | None:intergenic |
CCCTTGAAGTTCTTCATCCA+AGG | 0.553738 | tig0024468:+16437 | None:intergenic |
AAATCACGCGTACCCTTAGG+AGG | 0.557442 | tig0024468:+24367 | None:intergenic |
TCGCCGGTGACCGGAGGAGT+AGG | 0.557747 | tig0024468:+24412 | None:intergenic |
CAGTGGAATCTGACGGTGGA+GGG | 0.560948 | tig0024468:+24496 | None:intergenic |
AGAGTTGGTGTGTGAGTGAA+CGG | 0.561460 | tig0024468:+24548 | None:intergenic |
ACATATATAGAAACACATGC+GGG | 0.561777 | tig0024468:+15654 | None:intergenic |
ATTTAAGGTTTCTAGTCGAA+AGG | 0.563806 | tig0024468:-20608 | Msa1417300:intron |
TAAAGTTGGAGGTTTACGGT+TGG | 0.563872 | tig0024468:-15498 | None:intergenic |
GACCACCACCACAGATAGCT+CGG | 0.565388 | tig0024468:+17681 | None:intergenic |
CCACTTCAATGGTAGTGATA+CGG | 0.565478 | tig0024468:+21279 | None:intergenic |
CCGATTCTACCAGCGGCGGC+CGG | 0.571294 | tig0024468:-24450 | Msa1417300:CDS |
AAATGCAAGAGAGTTGGATA+GGG | 0.571473 | tig0024468:+24681 | None:intergenic |
TAGGAGACAACGCACCAGAC+CGG | 0.574351 | tig0024468:+24431 | None:intergenic |
GAAAGCTCTTGGTCTATCAC+AGG | 0.575882 | tig0024468:-19413 | Msa1417300:CDS |
TGAATTTAGAGAGGCTCGGA+GGG | 0.577193 | tig0024468:-18693 | Msa1417300:intron |
GTTCGTTAGGAAAGCAGGAG+AGG | 0.578818 | tig0024468:-24010 | Msa1417300:CDS |
GAGGCTCGGAGGGAGTGGGG+AGG | 0.582108 | tig0024468:-18683 | Msa1417300:CDS |
TGAACTTCGCCGGTGACCGG+AGG | 0.586827 | tig0024468:+24406 | None:intergenic |
TATTCCACTGGTAGTGCTCA+CGG | 0.588018 | tig0024468:+21206 | None:intergenic |
CAAGGCTGGTGATACAGAAA+GGG | 0.591824 | tig0024468:-21466 | Msa1417300:intron |
TGTGTGAGTGAACGGAAAAT+AGG | 0.591994 | tig0024468:+24556 | None:intergenic |
CCGTATCACTACCATTGAAG+TGG | 0.593455 | tig0024468:-21279 | Msa1417300:CDS |
ACAGTGGAATCTGACGGTGG+AGG | 0.593494 | tig0024468:+24495 | None:intergenic |
GGTTTGACATTGAAAGGGAA+CGG | 0.593636 | tig0024468:+24517 | None:intergenic |
CAATTATATCCATATTCCAC+TGG | 0.595037 | tig0024468:+21194 | None:intergenic |
TCTCAAACAGCTATTCTCAC+TGG | 0.596116 | tig0024468:-18650 | Msa1417300:CDS |
GCCTTGGATGAAGAACTTCA+AGG | 0.603043 | tig0024468:-16438 | Msa1417300:CDS |
GGTTCACTGTTGGACAATGT+TGG | 0.604004 | tig0024468:-21258 | Msa1417300:CDS |
ATTGAAAGGGAACGGTGAAG+AGG | 0.606097 | tig0024468:+24525 | None:intergenic |
GGATATAATTGGTGTTCCTG+GGG | 0.608512 | tig0024468:-21182 | Msa1417300:CDS |
CCAAATCCAAAACCACAAGC+AGG | 0.611173 | tig0024468:+17617 | None:intergenic |
CACATACATACCATAACCCC+AGG | 0.611623 | tig0024468:+21166 | None:intergenic |
GCAATCGCATTTCTTCGGGC+GGG | 0.612392 | tig0024468:+24344 | None:intergenic |
CAATGCCAGTGTAATAAGCA+AGG | 0.613142 | tig0024468:+18572 | None:intergenic |
TCGTTTGAAGAAAGTAACAA+TGG | 0.617916 | tig0024468:+20657 | None:intergenic |
TGGTTGAATTTAGAGAGGCT+CGG | 0.621474 | tig0024468:-18697 | Msa1417300:intron |
AAAGAGCGGACCTTCTAACT+CGG | 0.622357 | tig0024468:+19345 | None:intergenic |
AACATATATAGAAACACATG+CGG | 0.622934 | tig0024468:+15653 | None:intergenic |
CTCCACTGGTGAACAATACG+AGG | 0.626065 | tig0024468:-15787 | Msa1417300:CDS |
TCACTGTTGGACAATGTTGG+CGG | 0.626392 | tig0024468:-21255 | Msa1417300:CDS |
TTTCCTAACGAACAATGCCT+CGG | 0.643402 | tig0024468:+24020 | None:intergenic |
AAGCTCCGAGCTATCTGTGG+TGG | 0.643646 | tig0024468:-17686 | Msa1417300:CDS |
GGAAAGCTCCGAGCTATCTG+TGG | 0.644865 | tig0024468:-17689 | Msa1417300:CDS |
AGCTCTTGGTCTATCACAGG+AGG | 0.646723 | tig0024468:-19410 | Msa1417300:CDS |
CCTTGGATGAAGAACTTCAA+GGG | 0.647475 | tig0024468:-16437 | Msa1417300:CDS |
GCCGAGACCGATTCTACCAG+CGG | 0.650921 | tig0024468:-24457 | Msa1417300:CDS |
AACCTCGTATTGTTCACCAG+TGG | 0.653526 | tig0024468:+15785 | None:intergenic |
ATATATAGAAACACATGCGG+GGG | 0.653706 | tig0024468:+15656 | None:intergenic |
ATCGACGTGAATCCTCCTAA+GGG | 0.655052 | tig0024468:-24379 | Msa1417300:CDS |
ATATAGAAACACATGCGGGG+GGG | 0.656275 | tig0024468:+15658 | None:intergenic |
GAGTGCACAGTGGAATCTGA+CGG | 0.659937 | tig0024468:+24489 | None:intergenic |
GTAATCGCCGTGTTGCATTG+AGG | 0.663414 | tig0024468:-21511 | Msa1417300:CDS |
CATATATAGAAACACATGCG+GGG | 0.667867 | tig0024468:+15655 | None:intergenic |
TTGAATTTAGAGAGGCTCGG+AGG | 0.669866 | tig0024468:-18694 | Msa1417300:intron |
GCGGTATGAGAGAATGACAA+GGG | 0.676411 | tig0024468:-21236 | Msa1417300:CDS |
GTTCAGGCCTCAATGCAACA+CGG | 0.681935 | tig0024468:+21504 | None:intergenic |
TATATAGAAACACATGCGGG+GGG | 0.684454 | tig0024468:+15657 | None:intergenic |
GGAAATTCTGAGTGGCAAAG+GGG | 0.695274 | tig0024468:-15831 | Msa1417300:CDS |
AGTGAAGCTAAGCTTGACGA+TGG | 0.700789 | tig0024468:+24658 | None:intergenic |
CCACTGTGCACTCTCCCAAG+CGG | 0.704619 | tig0024468:-24479 | Msa1417300:CDS |
GGCGGTATGAGAGAATGACA+AGG | 0.707468 | tig0024468:-21237 | Msa1417300:CDS |
CGGTATGAGAGAATGACAAG+GGG | 0.708276 | tig0024468:-21235 | Msa1417300:CDS |
CTAATGTAGTAATTGAAACG+CGG | 0.709241 | tig0024468:+24580 | None:intergenic |
TGCACAGTGGAATCTGACGG+TGG | 0.724350 | tig0024468:+24492 | None:intergenic |
GAGACCGATTCTACCAGCGG+CGG | 0.724522 | tig0024468:-24454 | Msa1417300:CDS |
GTCGCCGTGAGCACTACCAG+TGG | 0.740173 | tig0024468:-21210 | Msa1417300:CDS |
CCGCTTGGGAGAGTGCACAG+TGG | 0.741033 | tig0024468:+24479 | None:intergenic |
TATTAGTAGGAAATTCTGAG+TGG | 0.746821 | tig0024468:-15839 | Msa1417300:CDS |
GGTATGAGAGAATGACAAGG+GGG | 0.786024 | tig0024468:-21234 | Msa1417300:CDS |
CRISPR-GE
badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
---|---|---|---|---|---|
!! | TAATAATATTAAAAAAAAAA+AGG | + | tig0024468:18647-18666 | None:intergenic | 0.0% |
!!! | TATTTAAAATATTTGTACTA+TGG | - | tig0024468:19429-19448 | Msa1417300:CDS | 10.0% |
!! | AATAATATTATTGAATGTAT+TGG | - | tig0024468:19456-19475 | Msa1417300:intron | 10.0% |
!!! | TTATATTTTATAATTGTAGA+TGG | - | tig0024468:20406-20425 | Msa1417300:intron | 10.0% |
!!! | TAACCATATTTAATTTTTTT+AGG | + | tig0024468:20461-20480 | None:intergenic | 10.0% |
!!! | ATTTTTAATGGTATTTTTAT+TGG | - | tig0024468:20520-20539 | Msa1417300:intron | 10.0% |
!!! | TTTTTAATGGTATTTTTATT+GGG | - | tig0024468:20521-20540 | Msa1417300:intron | 10.0% |
!!! | AAATATTGAGAAATTTTTTT+GGG | - | tig0024468:21843-21862 | Msa1417300:intron | 10.0% |
!! | ATTTCTAATTTATATTCTTA+TGG | - | tig0024468:21872-21891 | Msa1417300:intron | 10.0% |
!! | ATAAAGTAAATAATTCATTA+AGG | + | tig0024468:22207-22226 | None:intergenic | 10.0% |
!! | AAATAATATAATATATTGAG+TGG | + | tig0024468:22703-22722 | None:intergenic | 10.0% |
!!! | TTTTTTAATTTTTTGTACAA+AGG | + | tig0024468:22853-22872 | None:intergenic | 10.0% |
!!! | TGACATTTTTAACTAATTAT+TGG | - | tig0024468:16021-16040 | Msa1417300:intron | 15.0% |
!!! | GAGATTTTAAATGTTATTTT+TGG | - | tig0024468:16322-16341 | Msa1417300:intron | 15.0% |
!!! | TTTAAATGTTATTTTTGGTT+AGG | - | tig0024468:16327-16346 | Msa1417300:intron | 15.0% |
!!! | TTAAATGTTATTTTTGGTTA+GGG | - | tig0024468:16328-16347 | Msa1417300:intron | 15.0% |
!! | TGTTTAACTCTAATTTATTA+TGG | - | tig0024468:16589-16608 | Msa1417300:intron | 15.0% |
!! | AATTAAAGGGAAATTAAAAT+TGG | + | tig0024468:16818-16837 | None:intergenic | 15.0% |
!! | AAAACTTTAAACTAATTAAC+TGG | + | tig0024468:17707-17726 | None:intergenic | 15.0% |
!!! | ATTAAATTATGATTTTTGTG+AGG | - | tig0024468:17733-17752 | Msa1417300:intron | 15.0% |
!!! | TTAAATTATGATTTTTGTGA+GGG | - | tig0024468:17734-17753 | Msa1417300:intron | 15.0% |
!! | GTTCCTAAAAAAATTAAATA+TGG | - | tig0024468:20455-20474 | Msa1417300:intron | 15.0% |
!!! | TTTTATACGTGAATTTTTAA+TGG | - | tig0024468:20508-20527 | Msa1417300:intron | 15.0% |
!! | AATCTGTATAAAATTGAAAA+TGG | + | tig0024468:20740-20759 | None:intergenic | 15.0% |
!!! | TTTTATTTCCATTTTTTTTG+TGG | - | tig0024468:21251-21270 | Msa1417300:CDS | 15.0% |
!!! | CAAATATTGAGAAATTTTTT+TGG | - | tig0024468:21842-21861 | Msa1417300:intron | 15.0% |
!! | GATTAAATAATTCATATTCT+TGG | - | tig0024468:21959-21978 | Msa1417300:intron | 15.0% |
!! | TACTTTATAAAAAACAAGAA+AGG | - | tig0024468:22219-22238 | Msa1417300:intron | 15.0% |
!! | ACTTTATAAAAAACAAGAAA+GGG | - | tig0024468:22220-22239 | Msa1417300:intron | 15.0% |
!! | CAAGATGTAATAAAATATTA+AGG | + | tig0024468:23036-23055 | None:intergenic | 15.0% |
!! | AATTCTTATGAATTAAAAGT+TGG | + | tig0024468:23209-23228 | None:intergenic | 15.0% |
!!! | TTTTTCATTTGTAAAATTAC+TGG | + | tig0024468:23277-23296 | None:intergenic | 15.0% |
!!! | TTTTATAATTTCCATTTCAT+AGG | - | tig0024468:23419-23438 | Msa1417300:intron | 15.0% |
!! | CTTACAAGTATTAAAAATAA+AGG | + | tig0024468:23635-23654 | None:intergenic | 15.0% |
!! | TAATCGAAAAAAACATATTA+TGG | + | tig0024468:24054-24073 | None:intergenic | 15.0% |
!!! | TATGTATTTTGTTTCATTAT+TGG | - | tig0024468:24488-24507 | Msa1417300:CDS | 15.0% |
!!! | GCTTTTTAATAATTTCAAAG+AGG | - | tig0024468:15894-15913 | Msa1417300:intron | 20.0% |
!! | GTATACTTTATGGTTATAAT+TGG | - | tig0024468:15916-15935 | Msa1417300:intron | 20.0% |
!!! | TTTAATATGGATTGTTTTTG+TGG | - | tig0024468:16097-16116 | Msa1417300:intron | 20.0% |
!! | GACATTAAATATTAAAAGCA+TGG | + | tig0024468:16554-16573 | None:intergenic | 20.0% |
!! | TTTATTATGGTAGCTAAAAT+TGG | - | tig0024468:16602-16621 | Msa1417300:intron | 20.0% |
!! | TATTTACAACTTTAGTTGTT+TGG | + | tig0024468:16669-16688 | None:intergenic | 20.0% |
!! | TTTCTCAAAATACAATAGAA+TGG | - | tig0024468:16767-16786 | Msa1417300:intron | 20.0% |
!! | ATTAAAATTGGAGAATTTCA+TGG | + | tig0024468:16806-16825 | None:intergenic | 20.0% |
!! | AAATTTGGATACTTAAAAAG+TGG | + | tig0024468:17172-17191 | None:intergenic | 20.0% |
!!! | AATTTGATGGTACAAAAATT+TGG | + | tig0024468:17187-17206 | None:intergenic | 20.0% |
!! | AACATATGTGGTTTAAAAAA+CGG | - | tig0024468:17509-17528 | Msa1417300:intron | 20.0% |
!!! | TAAATTATGATTTTTGTGAG+GGG | - | tig0024468:17735-17754 | Msa1417300:intron | 20.0% |
!!! | TCTCATTTAAGTTTATTTTC+AGG | - | tig0024468:17987-18006 | Msa1417300:intron | 20.0% |
!! | ACAACTAAAATAATGATATG+TGG | + | tig0024468:18033-18052 | None:intergenic | 20.0% |
!!! | ATTTTAGTTGTAAACAAACT+TGG | - | tig0024468:18042-18061 | Msa1417300:intron | 20.0% |
!!! | TTTTAGTTGTAAACAAACTT+GGG | - | tig0024468:18043-18062 | Msa1417300:intron | 20.0% |
!! | ATTGTACATAACATATTGTA+TGG | + | tig0024468:18388-18407 | None:intergenic | 20.0% |
!!! | TTTTGTTATTTGAATCCAAT+AGG | - | tig0024468:18425-18444 | Msa1417300:intron | 20.0% |
!! | TTATGTTAATATAGCAGTTA+TGG | - | tig0024468:19170-19189 | Msa1417300:intron | 20.0% |
!! | TATGTTAATATAGCAGTTAT+GGG | - | tig0024468:19171-19190 | Msa1417300:intron | 20.0% |
!! | TTAAAATATTTGTACTATGG+CGG | - | tig0024468:19432-19451 | Msa1417300:CDS | 20.0% |
!!! | TATTTTCTTTTTATGAACGA+TGG | - | tig0024468:19632-19651 | Msa1417300:intron | 20.0% |
!!! | TTTATTTTAACCTATTCATG+TGG | - | tig0024468:20214-20233 | Msa1417300:intron | 20.0% |
!!! | AATTTTTTTAGGAACAAACA+AGG | + | tig0024468:20450-20469 | None:intergenic | 20.0% |
!! | AATAATAGAATAGAGGATAA+TGG | + | tig0024468:20573-20592 | None:intergenic | 20.0% |
!!! | ATCCTCTATTCTATTATTTT+TGG | - | tig0024468:20575-20594 | Msa1417300:intron | 20.0% |
!! | ATCCAAAAATAATAGAATAG+AGG | + | tig0024468:20580-20599 | None:intergenic | 20.0% |
!! | AATCAATTTAATGTAAAGAG+CGG | + | tig0024468:20880-20899 | None:intergenic | 20.0% |
!!! | TTCATTTTTCCAAAATATTC+TGG | - | tig0024468:21151-21170 | Msa1417300:intron | 20.0% |
!! | ACCTCTTTCATATTATTATT+GGG | - | tig0024468:21218-21237 | Msa1417300:CDS | 20.0% |
!!! | TTGTTTTTAACAACTAATAC+AGG | + | tig0024468:21464-21483 | None:intergenic | 20.0% |
!!! | ATGAATTTTGACAAAAAAAG+TGG | - | tig0024468:21987-22006 | Msa1417300:intron | 20.0% |
!! | AAAAAAAATTACAGAATGAG+AGG | + | tig0024468:22184-22203 | None:intergenic | 20.0% |
!!! | TCAAAATACTAAAGTTTTAC+CGG | - | tig0024468:22301-22320 | Msa1417300:intron | 20.0% |
!! | TACACAATATGAAAAACAAA+TGG | - | tig0024468:22375-22394 | Msa1417300:intron | 20.0% |
!! | TTACAAATTAACACAACAAT+AGG | + | tig0024468:22421-22440 | None:intergenic | 20.0% |
!! | AAATGATTGAATTCTTCATT+AGG | - | tig0024468:22482-22501 | Msa1417300:intron | 20.0% |
!! | AATGATTGAATTCTTCATTA+GGG | - | tig0024468:22483-22502 | Msa1417300:intron | 20.0% |
!!! | AGTTGAGTTGTTTAAATAAT+TGG | + | tig0024468:22734-22753 | None:intergenic | 20.0% |
!!! | TATAAATGTGTTTTTGCTTT+TGG | - | tig0024468:23065-23084 | Msa1417300:intron | 20.0% |
!!! | ATAAATGTGTTTTTGCTTTT+GGG | - | tig0024468:23066-23085 | Msa1417300:intron | 20.0% |
!!! | ATTTGTAAAATTACTGGTTT+GGG | + | tig0024468:23271-23290 | None:intergenic | 20.0% |
!! | TGGAAATTATAAAAGAATCA+GGG | + | tig0024468:23413-23432 | None:intergenic | 20.0% |
!! | ATGGAAATTATAAAAGAATC+AGG | + | tig0024468:23414-23433 | None:intergenic | 20.0% |
!!! | AGATTTTTATCACTAGTTAA+AGG | - | tig0024468:23444-23463 | Msa1417300:intron | 20.0% |
!! | AATTAAGCAAAAATGACAAA+AGG | + | tig0024468:23886-23905 | None:intergenic | 20.0% |
!!! | TGTCATTTTTGCTTAATTTT+TGG | - | tig0024468:23888-23907 | Msa1417300:intron | 20.0% |
!!! | TTTTTTACACAGTATATGTT+AGG | - | tig0024468:23916-23935 | Msa1417300:intron | 20.0% |
!!! | TTTTTACACAGTATATGTTA+GGG | - | tig0024468:23917-23936 | Msa1417300:intron | 20.0% |
!! | AACTTTAATCATCTTTAGTA+TGG | + | tig0024468:24697-24716 | None:intergenic | 20.0% |
!! | ATACTAAAGATGATTAAAGT+TGG | - | tig0024468:24696-24715 | Msa1417300:five_prime_UTR | 20.0% |
!! | TTTCAAAGAGGTATACTTTA+TGG | - | tig0024468:15906-15925 | Msa1417300:intron | 25.0% |
! | GCACAAATAATTCTTATCAA+AGG | - | tig0024468:15959-15978 | Msa1417300:intron | 25.0% |
!!! | GGTATTTGGATGTTTTAATA+TGG | - | tig0024468:16084-16103 | Msa1417300:intron | 25.0% |
! | TCTTTCACTTGTTTGTAATT+AGG | - | tig0024468:16243-16262 | Msa1417300:intron | 25.0% |
! | CTTTCACTTGTTTGTAATTA+GGG | - | tig0024468:16244-16263 | Msa1417300:intron | 25.0% |
!!! | GAGATTTTTATTTCGTCTAT+AGG | - | tig0024468:16375-16394 | Msa1417300:CDS | 25.0% |
!!! | ATTTTTATTTCGTCTATAGG+TGG | - | tig0024468:16378-16397 | Msa1417300:CDS | 25.0% |
! | ATGATTCCAATCCAAATTTA+AGG | + | tig0024468:16727-16746 | None:intergenic | 25.0% |
!! | ATTTGGATTGGAATCATAAA+CGG | - | tig0024468:16730-16749 | Msa1417300:intron | 25.0% |
! | ACCATTCTCAAAGAATTAAA+GGG | + | tig0024468:16831-16850 | None:intergenic | 25.0% |
! | TACCATTCTCAAAGAATTAA+AGG | + | tig0024468:16832-16851 | None:intergenic | 25.0% |
!! | TTAATTCTTTGAGAATGGTA+TGG | - | tig0024468:16832-16851 | Msa1417300:intron | 25.0% |
!! | ATTTAAAACACCCAAAACAA+CGG | - | tig0024468:16878-16897 | Msa1417300:intron | 25.0% |
! | AAATTAGAATCTAAACCTGA+TGG | - | tig0024468:17485-17504 | Msa1417300:intron | 25.0% |
! | TTAATAAAAGTGACATCCAT+TGG | + | tig0024468:17663-17682 | None:intergenic | 25.0% |
! | TTTAGTTGTAAACAAACTTG+GGG | - | tig0024468:18044-18063 | Msa1417300:intron | 25.0% |
!! | ACCAAAGTTTTTAATCAAAG+AGG | + | tig0024468:18081-18100 | None:intergenic | 25.0% |
! | AATGTTATCTGTCCATAAAA+CGG | + | tig0024468:18358-18377 | None:intergenic | 25.0% |
! | ATTACCTCTAAATTACCTTA+CGG | + | tig0024468:18485-18504 | None:intergenic | 25.0% |
!!! | GTAAAAATTTGCTATGACAA+TGG | + | tig0024468:18583-18602 | None:intergenic | 25.0% |
!!! | CATTTTGATATTCCCATTTT+AGG | - | tig0024468:18772-18791 | Msa1417300:intron | 25.0% |
!!! | ACTGTAATTTTTAGACATAG+AGG | + | tig0024468:18826-18845 | None:intergenic | 25.0% |
! | GAAAACATGAGTAATTATAC+AGG | + | tig0024468:18853-18872 | None:intergenic | 25.0% |
!! | ATACACATCTTTTTATGTAG+TGG | - | tig0024468:19074-19093 | Msa1417300:intron | 25.0% |
!! | TACACATCTTTTTATGTAGT+GGG | - | tig0024468:19075-19094 | Msa1417300:intron | 25.0% |
! | TCCATTAACTAATAAAACCA+CGG | + | tig0024468:19136-19155 | None:intergenic | 25.0% |
! | TCTATTGTCGGAAAAAAAAA+GGG | + | tig0024468:19241-19260 | None:intergenic | 25.0% |
! | ATCTATTGTCGGAAAAAAAA+AGG | + | tig0024468:19242-19261 | None:intergenic | 25.0% |
! | ACTCATTTCATGACTTATTA+CGG | + | tig0024468:19316-19335 | None:intergenic | 25.0% |
! | AATGTATTGGACTCTAATAT+TGG | - | tig0024468:19469-19488 | Msa1417300:intron | 25.0% |
! | TAGCACATCTATTAAATCTA+CGG | + | tig0024468:19889-19908 | None:intergenic | 25.0% |
! | ATAATGTCCACAAGTATATA+GGG | + | tig0024468:20009-20028 | None:intergenic | 25.0% |
! | AATAATGTCCACAAGTATAT+AGG | + | tig0024468:20010-20029 | None:intergenic | 25.0% |
!!! | TTGTTATTTAGGATTCTTTC+TGG | - | tig0024468:20054-20073 | Msa1417300:intron | 25.0% |
! | AGATATACAACAAAATGACA+AGG | + | tig0024468:20268-20287 | None:intergenic | 25.0% |
! | TCAATACCTGAAAATATGTT+TGG | - | tig0024468:20328-20347 | Msa1417300:intron | 25.0% |
! | ATAAAGTGAGTTATGCATAT+TGG | - | tig0024468:20371-20390 | Msa1417300:intron | 25.0% |
!!! | TTATGCATATTGGTTCTATT+TGG | - | tig0024468:20381-20400 | Msa1417300:intron | 25.0% |
!!! | TATGCATATTGGTTCTATTT+GGG | - | tig0024468:20382-20401 | Msa1417300:intron | 25.0% |
!! | ATAGTGGGGTAAAAATAATA+TGG | + | tig0024468:20603-20622 | None:intergenic | 25.0% |
! | TGAAAAACACAAATAATAGC+CGG | - | tig0024468:20961-20980 | Msa1417300:intron | 25.0% |
! | TAACTTGGGAAATGATAAAT+TGG | + | tig0024468:21060-21079 | None:intergenic | 25.0% |
! | AAAAACAAAATCCTTCACTA+AGG | + | tig0024468:21112-21131 | None:intergenic | 25.0% |
!!! | TTGTTTTTTTCACTTGTTGA+TGG | - | tig0024468:21124-21143 | Msa1417300:intron | 25.0% |
!! | AAATCTTGTCCAGAATATTT+TGG | + | tig0024468:21163-21182 | None:intergenic | 25.0% |
! | GACCTCTTTCATATTATTAT+TGG | - | tig0024468:21217-21236 | Msa1417300:CDS | 25.0% |
! | ACCCAATAATAATATGAAAG+AGG | + | tig0024468:21222-21241 | None:intergenic | 25.0% |
! | TCTTTCATATTATTATTGGG+TGG | - | tig0024468:21221-21240 | Msa1417300:CDS | 25.0% |
!! | ATGATTTGCCACAAAAAAAA+TGG | + | tig0024468:21262-21281 | None:intergenic | 25.0% |
!! | GGTTTTTAAATCTAACATGA+GGG | + | tig0024468:21356-21375 | None:intergenic | 25.0% |
!! | AGGTTTTTAAATCTAACATG+AGG | + | tig0024468:21357-21376 | None:intergenic | 25.0% |
! | CATATACTCTCTCAATTATT+AGG | - | tig0024468:21424-21443 | Msa1417300:intron | 25.0% |
! | ACTTACATGAAATCTCAATT+TGG | - | tig0024468:21491-21510 | Msa1417300:CDS | 25.0% |
! | TGCAAACAATACTATCTATT+TGG | + | tig0024468:21694-21713 | None:intergenic | 25.0% |
! | TTACTTGATACATTTCTCAT+TGG | - | tig0024468:21777-21796 | Msa1417300:intron | 25.0% |
! | AAAGAAGATGAAATGCATAA+AGG | - | tig0024468:22149-22168 | Msa1417300:intron | 25.0% |
!!! | GTTGTGTTAATTTGTAACTA+TGG | - | tig0024468:22424-22443 | Msa1417300:intron | 25.0% |
! | GAATTCAATCATTTGAAAGA+GGG | + | tig0024468:22476-22495 | None:intergenic | 25.0% |
! | AGAATTCAATCATTTGAAAG+AGG | + | tig0024468:22477-22496 | None:intergenic | 25.0% |
! | AGTCTATAACTTCTCATTAA+TGG | - | tig0024468:22636-22655 | Msa1417300:intron | 25.0% |
! | GTCTATAACTTCTCATTAAT+GGG | - | tig0024468:22637-22656 | Msa1417300:intron | 25.0% |
!! | TTTTATTACATCTTGATACC+TGG | - | tig0024468:23041-23060 | Msa1417300:intron | 25.0% |
! | TTTATTACATCTTGATACCT+GGG | - | tig0024468:23042-23061 | Msa1417300:intron | 25.0% |
!!! | GAATGCATTTTTTATACATG+TGG | + | tig0024468:23185-23204 | None:intergenic | 25.0% |
! | AATTCATAAGAATTGTTGCA+TGG | - | tig0024468:23215-23234 | Msa1417300:intron | 25.0% |
!! | CATTTGTAAAATTACTGGTT+TGG | + | tig0024468:23272-23291 | None:intergenic | 25.0% |
!!! | TGGAGAATTTCATATTTTGA+GGG | + | tig0024468:23351-23370 | None:intergenic | 25.0% |
!! | ATGGAGAATTTCATATTTTG+AGG | + | tig0024468:23352-23371 | None:intergenic | 25.0% |
! | GGAAATTATAAAAGAATCAG+GGG | + | tig0024468:23412-23431 | None:intergenic | 25.0% |
! | TAAAAATCTCTCCTATGAAA+TGG | + | tig0024468:23433-23452 | None:intergenic | 25.0% |
! | AATAAAGGTAAGATATCAGT+TGG | + | tig0024468:23620-23639 | None:intergenic | 25.0% |
!! | ATCCTCTCTTTTCAATTAAA+AGG | + | tig0024468:24026-24045 | None:intergenic | 25.0% |
! | TAATTGAAAAGAGAGGATAA+AGG | - | tig0024468:24028-24047 | Msa1417300:CDS | 25.0% |
!! | TTTTCGATTATAAAGTACAG+AGG | - | tig0024468:24064-24083 | Msa1417300:CDS | 25.0% |
! | TTTCGATTATAAAGTACAGA+GGG | - | tig0024468:24065-24084 | Msa1417300:CDS | 25.0% |
! | TGTTTGATTAAGAAACTATG+AGG | - | tig0024468:24115-24134 | Msa1417300:intron | 25.0% |
! | ATCAAATTTATCCTAACTAC+AGG | - | tig0024468:24165-24184 | Msa1417300:intron | 25.0% |
! | AACATATATAGAAACACATG+CGG | + | tig0024468:24558-24577 | None:intergenic | 25.0% |
! | ATCTTTAGTATGGTAGATTA+TGG | + | tig0024468:24687-24706 | None:intergenic | 25.0% |
CTAATGTAGTAATTGAAACG+CGG | + | tig0024468:15631-15650 | None:intergenic | 30.0% | |
!! | GTTTGTAATTAGGGTTAGTT+TGG | - | tig0024468:16253-16272 | Msa1417300:intron | 30.0% |
!!! | TATTTTTGGTTAGGGAGAAA+TGG | - | tig0024468:16336-16355 | Msa1417300:intron | 30.0% |
!! | TTGGTTCAATTTTTGAGAGA+GGG | + | tig0024468:16650-16669 | None:intergenic | 30.0% |
!! | TTTGGTTCAATTTTTGAGAG+AGG | + | tig0024468:16651-16670 | None:intergenic | 30.0% |
TCATAAACGGCTATATTGTT+TGG | - | tig0024468:16743-16762 | Msa1417300:intron | 30.0% | |
GAGAATTTCATGGAATATGA+TGG | + | tig0024468:16796-16815 | None:intergenic | 30.0% | |
! | TCCCTTTAATTCTTTGAGAA+TGG | - | tig0024468:16827-16846 | Msa1417300:intron | 30.0% |
!! | AGTTGTTATTCCGTTGTTTT+GGG | + | tig0024468:16891-16910 | None:intergenic | 30.0% |
TAATAAGTGTACTCAGAGAA+TGG | + | tig0024468:17079-17098 | None:intergenic | 30.0% | |
! | TTTTGTACCATCAAATTGCT+AGG | - | tig0024468:17190-17209 | Msa1417300:intron | 30.0% |
CATATATCCTAGCAATTTGA+TGG | + | tig0024468:17200-17219 | None:intergenic | 30.0% | |
ATGTTCTTCACACTTTCAAT+AGG | - | tig0024468:17238-17257 | Msa1417300:intron | 30.0% | |
GGTACACTCAAATCTAATAT+CGG | - | tig0024468:17433-17452 | Msa1417300:intron | 30.0% | |
!! | TAAACTAATTAACTGGCCTT+GGG | + | tig0024468:17700-17719 | None:intergenic | 30.0% |
! | TTAAACTAATTAACTGGCCT+TGG | + | tig0024468:17701-17720 | None:intergenic | 30.0% |
AATGTCTATCACAAACTACT+AGG | - | tig0024468:17878-17897 | Msa1417300:intron | 30.0% | |
TACTAGGTGTAGTATTATCT+TGG | - | tig0024468:17894-17913 | Msa1417300:intron | 30.0% | |
GCCTCTTTGATTAAAAACTT+TGG | - | tig0024468:18077-18096 | Msa1417300:intron | 30.0% | |
CTGCAAAAACACTGAAATAT+CGG | + | tig0024468:18112-18131 | None:intergenic | 30.0% | |
!! | TTTCAGTGTTTTTGCAGTTA+AGG | - | tig0024468:18115-18134 | Msa1417300:intron | 30.0% |
!! | GTCTTTGTTATTCTGCATTA+TGG | - | tig0024468:18141-18160 | Msa1417300:intron | 30.0% |
AACCACTTGTGTAAAAAACA+GGG | - | tig0024468:18252-18271 | Msa1417300:intron | 30.0% | |
GATGTAAGCAAACCTAAAAT+GGG | + | tig0024468:18787-18806 | None:intergenic | 30.0% | |
AGATGTAAGCAAACCTAAAA+TGG | + | tig0024468:18788-18807 | None:intergenic | 30.0% | |
! | ATGATTGTTCCTTTTTCTTC+AGG | - | tig0024468:18902-18921 | Msa1417300:intron | 30.0% |
CAATTATATCCATATTCCAC+TGG | + | tig0024468:19017-19036 | None:intergenic | 30.0% | |
CAGTGGAATATGGATATAAT+TGG | - | tig0024468:19015-19034 | Msa1417300:intron | 30.0% | |
! | ACACATCTTTTTATGTAGTG+GGG | - | tig0024468:19076-19095 | Msa1417300:intron | 30.0% |
AAATGTTTCATGATTGATCC+AGG | - | tig0024468:19101-19120 | Msa1417300:intron | 30.0% | |
!!! | ACCGTGGTTTTATTAGTTAA+TGG | - | tig0024468:19132-19151 | Msa1417300:intron | 30.0% |
CAACTACAAAAAGAAGAAAC+AGG | + | tig0024468:19268-19287 | None:intergenic | 30.0% | |
TCATTTCATGACTTATTACG+GGG | + | tig0024468:19314-19333 | None:intergenic | 30.0% | |
CTCATTTCATGACTTATTAC+GGG | + | tig0024468:19315-19334 | None:intergenic | 30.0% | |
! | ATGCTTTGTATGAAGTTTTG+TGG | - | tig0024468:19386-19405 | Msa1417300:CDS | 30.0% |
!! | CTGCTTATTTTCAACATTGT+AGG | - | tig0024468:19507-19526 | Msa1417300:intron | 30.0% |
TCGTTTGAAGAAAGTAACAA+TGG | + | tig0024468:19554-19573 | None:intergenic | 30.0% | |
! | GTTACTTTCTTCAAACGAAT+AGG | - | tig0024468:19556-19575 | Msa1417300:intron | 30.0% |
AGAATCAGATGTTGGATTTA+AGG | - | tig0024468:19585-19604 | Msa1417300:intron | 30.0% | |
!! | ATTTAAGGTTTCTAGTCGAA+AGG | - | tig0024468:19600-19619 | Msa1417300:intron | 30.0% |
!! | AGCTTTTTAGGAACATATCA+TGG | + | tig0024468:19764-19783 | None:intergenic | 30.0% |
ATGATATGTTCCTAAAAAGC+TGG | - | tig0024468:19763-19782 | Msa1417300:intron | 30.0% | |
! | TAGCAAATTACCAGCTTTTT+AGG | + | tig0024468:19776-19795 | None:intergenic | 30.0% |
GTTATAACTGCATCATTCAA+TGG | + | tig0024468:20099-20118 | None:intergenic | 30.0% | |
ACGAACATGAAATAATAGTG+GGG | + | tig0024468:20617-20636 | None:intergenic | 30.0% | |
GACGAACATGAAATAATAGT+GGG | + | tig0024468:20618-20637 | None:intergenic | 30.0% | |
AGACGAACATGAAATAATAG+TGG | + | tig0024468:20619-20638 | None:intergenic | 30.0% | |
TCCTTGTCTACTTTAGATTT+AGG | - | tig0024468:20673-20692 | Msa1417300:CDS | 30.0% | |
! | ACCTAAATCTAAAGTAGACA+AGG | + | tig0024468:20677-20696 | None:intergenic | 30.0% |
TACATATTTCACTCACAGTA+TGG | + | tig0024468:20704-20723 | None:intergenic | 30.0% | |
TCTTTCTTTATCTCATCAAC+TGG | + | tig0024468:20772-20791 | None:intergenic | 30.0% | |
AGTTCTTTCTGTAAAGTCAT+TGG | - | tig0024468:20840-20859 | Msa1417300:intron | 30.0% | |
TTCATTAGCATGCATAACTT+GGG | + | tig0024468:21074-21093 | None:intergenic | 30.0% | |
TTTCATTAGCATGCATAACT+TGG | + | tig0024468:21075-21094 | None:intergenic | 30.0% | |
AAAATCCTTCACTAAGGAAA+GGG | + | tig0024468:21106-21125 | None:intergenic | 30.0% | |
ATGAGGGATATGATAAACAA+CGG | + | tig0024468:21340-21359 | None:intergenic | 30.0% | |
AAGAAATAGGCAAAGAAACT+AGG | + | tig0024468:21377-21396 | None:intergenic | 30.0% | |
AACTTTATGGTACCACAAAT+GGG | + | tig0024468:21404-21423 | None:intergenic | 30.0% | |
! | GAGAGAGTATATGAACTTTA+TGG | + | tig0024468:21417-21436 | None:intergenic | 30.0% |
CAATTTGGTTGAATTTAGAG+AGG | - | tig0024468:21506-21525 | Msa1417300:CDS | 30.0% | |
AAAAGTTTGGTTACTCCAAA+TGG | - | tig0024468:21584-21603 | Msa1417300:intron | 30.0% | |
! | TGCACTAGTATACATAGTTT+TGG | - | tig0024468:21710-21729 | Msa1417300:intron | 30.0% |
TACATACTCATGTAATGTGT+AGG | - | tig0024468:22043-22062 | Msa1417300:intron | 30.0% | |
AATTACAGAATGAGAGGAAA+CGG | + | tig0024468:22178-22197 | None:intergenic | 30.0% | |
TCATATTGTGTAACTGCAAT+GGG | + | tig0024468:22367-22386 | None:intergenic | 30.0% | |
TTCATATTGTGTAACTGCAA+TGG | + | tig0024468:22368-22387 | None:intergenic | 30.0% | |
! | GATCATTTGTTCTCAACTTT+TGG | - | tig0024468:22555-22574 | Msa1417300:intron | 30.0% |
TCCATTTATACCACCAAATT+GGG | + | tig0024468:22678-22697 | None:intergenic | 30.0% | |
GAGTATATTGCGAGATTTAT+GGG | + | tig0024468:22804-22823 | None:intergenic | 30.0% | |
AGAGTATATTGCGAGATTTA+TGG | + | tig0024468:22805-22824 | None:intergenic | 30.0% | |
ATCTCGCAATATACTCTAAA+TGG | - | tig0024468:22808-22827 | Msa1417300:intron | 30.0% | |
TCTCGCAATATACTCTAAAT+GGG | - | tig0024468:22809-22828 | Msa1417300:intron | 30.0% | |
! | CATAAGAGCATAAATATGTG+TGG | + | tig0024468:22984-23003 | None:intergenic | 30.0% |
CACACATATTTATGCTCTTA+TGG | - | tig0024468:22982-23001 | Msa1417300:intron | 30.0% | |
!! | ACTTGCTGAAAGATTGTTTT+GGG | - | tig0024468:23097-23116 | Msa1417300:intron | 30.0% |
!! | TACTGGTTTGGGTATTTATT+TGG | + | tig0024468:23260-23279 | None:intergenic | 30.0% |
TTCAAAATGCAAGGGAAAAT+GGG | + | tig0024468:23326-23345 | None:intergenic | 30.0% | |
ATTCAAAATGCAAGGGAAAA+TGG | + | tig0024468:23327-23346 | None:intergenic | 30.0% | |
AAGGTGATATACATCTACAA+AGG | - | tig0024468:23463-23482 | Msa1417300:intron | 30.0% | |
!!! | ATACATCTACAAAGGTGTTT+TGG | - | tig0024468:23471-23490 | Msa1417300:intron | 30.0% |
!!! | TACATCTACAAAGGTGTTTT+GGG | - | tig0024468:23472-23491 | Msa1417300:intron | 30.0% |
ACTGTTGCATAAAACAAAGT+TGG | + | tig0024468:23691-23710 | None:intergenic | 30.0% | |
AGGATTTCATACCATTTAAG+TGG | + | tig0024468:23866-23885 | None:intergenic | 30.0% | |
!! | CTCCTTTTAATTGAAAAGAG+AGG | - | tig0024468:24021-24040 | Msa1417300:CDS | 30.0% |
! | TTCTTTAGTTTCCTGTAGTT+AGG | + | tig0024468:24179-24198 | None:intergenic | 30.0% |
AAATCTTATCAGAAGACTGA+CGG | + | tig0024468:24287-24306 | None:intergenic | 30.0% | |
TATCCTCTTTATTCTCCTTT+AGG | - | tig0024468:24306-24325 | Msa1417300:intron | 30.0% | |
ATCCTCTTTATTCTCCTTTA+GGG | - | tig0024468:24307-24326 | Msa1417300:intron | 30.0% | |
TATTAGTAGGAAATTCTGAG+TGG | - | tig0024468:24369-24388 | Msa1417300:CDS | 30.0% | |
ACATATATAGAAACACATGC+GGG | + | tig0024468:24557-24576 | None:intergenic | 30.0% | |
CTAAAGATGATTAAAGTTGG+AGG | - | tig0024468:24699-24718 | Msa1417300:five_prime_UTR | 30.0% | |
TGATTAAAGTTGGAGGTTTA+CGG | - | tig0024468:24706-24725 | Msa1417300:five_prime_UTR | 30.0% | |
AAATGCAAGAGAGTTGGATA+GGG | + | tig0024468:15530-15549 | None:intergenic | 35.0% | |
ATGAAGAACGAACACGAAAA+TGG | + | tig0024468:15601-15620 | None:intergenic | 35.0% | |
TGTAGTGTAAATGTCTGTGT+TGG | - | tig0024468:16052-16071 | Msa1417300:intron | 35.0% | |
!!! | TGGTTTGTTGCGATGATTTT+AGG | - | tig0024468:16117-16136 | Msa1417300:intron | 35.0% |
!! | TTTTAGGTGTCAAGGTTGTA+CGG | - | tig0024468:16133-16152 | Msa1417300:intron | 35.0% |
!! | TTAGGGTTAGTTTGGTTCAA+TGG | - | tig0024468:16261-16280 | Msa1417300:intron | 35.0% |
!! | TAGGGTTAGTTTGGTTCAAT+GGG | - | tig0024468:16262-16281 | Msa1417300:intron | 35.0% |
TTAGGGAGAAATGGTTAAAG+AGG | - | tig0024468:16345-16364 | Msa1417300:intron | 35.0% | |
ACTGCAATGTTGAGATTGTT+AGG | + | tig0024468:16483-16502 | None:intergenic | 35.0% | |
CTCAACATTGCAGTTGAATT+AGG | - | tig0024468:16489-16508 | Msa1417300:CDS | 35.0% | |
!! | TTCAATTTTTGAGAGAGGGT+GGG | + | tig0024468:16646-16665 | None:intergenic | 35.0% |
ACCAATAGGCTCCTTAAATT+TGG | - | tig0024468:16713-16732 | Msa1417300:intron | 35.0% | |
TCCAAATTTAAGGAGCCTAT+TGG | + | tig0024468:16717-16736 | None:intergenic | 35.0% | |
TAGGCTCCTTAAATTTGGAT+TGG | - | tig0024468:16718-16737 | Msa1417300:intron | 35.0% | |
!! | CAGTTGTTATTCCGTTGTTT+TGG | + | tig0024468:16892-16911 | None:intergenic | 35.0% |
! | TCATCTTACGAGCTAACTTT+TGG | + | tig0024468:16974-16993 | None:intergenic | 35.0% |
AAAAGTTAGCTCGTAAGATG+AGG | - | tig0024468:16973-16992 | Msa1417300:intron | 35.0% | |
AAAGTTAGCTCGTAAGATGA+GGG | - | tig0024468:16974-16993 | Msa1417300:intron | 35.0% | |
TTAACAATGTGAGACTCCAA+CGG | - | tig0024468:17029-17048 | Msa1417300:intron | 35.0% | |
TGGATACTTAAAAAGTGGAG+TGG | + | tig0024468:17167-17186 | None:intergenic | 35.0% | |
ATGTGTTTCTTAGCTTAGCT+TGG | - | tig0024468:17279-17298 | Msa1417300:intron | 35.0% | |
CATTCATCACTCTCAGAATT+CGG | - | tig0024468:17370-17389 | Msa1417300:intron | 35.0% | |
AAACCTGATGGAAACATATG+TGG | - | tig0024468:17497-17516 | Msa1417300:intron | 35.0% | |
AAACCACATATGTTTCCATC+AGG | + | tig0024468:17503-17522 | None:intergenic | 35.0% | |
TAGAAGTAAAAGTCCCACAT+CGG | - | tig0024468:17532-17551 | Msa1417300:intron | 35.0% | |
TACACATTGATAGGAAGAGA+AGG | - | tig0024468:17563-17582 | Msa1417300:intron | 35.0% | |
!! | GGTAGTTTGTTTAAGGAATG+AGG | + | tig0024468:17610-17629 | None:intergenic | 35.0% |
!! | AAAGTGTTGTTCATTTCCCA+AGG | - | tig0024468:17681-17700 | Msa1417300:CDS | 35.0% |
CATGGAATTCGACAATTGTA+GGG | + | tig0024468:17771-17790 | None:intergenic | 35.0% | |
TCGAATTCCATGCGAATTAT+GGG | - | tig0024468:17779-17798 | Msa1417300:intron | 35.0% | |
GATGTCAATCATGTACTACT+AGG | - | tig0024468:17919-17938 | Msa1417300:intron | 35.0% | |
TACTAGGTGTAGCATTATCT+TGG | - | tig0024468:17935-17954 | Msa1417300:intron | 35.0% | |
TATGGACAGATAACATTGTG+AGG | - | tig0024468:18159-18178 | Msa1417300:intron | 35.0% | |
ATGGACAGATAACATTGTGA+GGG | - | tig0024468:18160-18179 | Msa1417300:intron | 35.0% | |
CAACCACTTGTGTAAAAAAC+AGG | - | tig0024468:18251-18270 | Msa1417300:intron | 35.0% | |
!!! | TACCCTGTTTTTTACACAAG+TGG | + | tig0024468:18257-18276 | None:intergenic | 35.0% |
CTTGTGTAAAAAACAGGGTA+AGG | - | tig0024468:18257-18276 | Msa1417300:intron | 35.0% | |
TGTCTTCTCTTCACAATTAG+TGG | + | tig0024468:18618-18637 | None:intergenic | 35.0% | |
! | ATGGATATAATTGGTGTTCC+TGG | - | tig0024468:19024-19043 | Msa1417300:intron | 35.0% |
! | TGGATATAATTGGTGTTCCT+GGG | - | tig0024468:19025-19044 | Msa1417300:intron | 35.0% |
ATTGTCGGAAAAAAAAAGGG+TGG | + | tig0024468:19238-19257 | None:intergenic | 35.0% | |
GAAACAGGTTCATCTATTGT+CGG | + | tig0024468:19253-19272 | None:intergenic | 35.0% | |
! | CTTTTTGTAGTTGAGTCTCA+AGG | - | tig0024468:19275-19294 | Msa1417300:intron | 35.0% |
!! | TTTGTATGAAGTTTTGTGGC+TGG | - | tig0024468:19390-19409 | Msa1417300:CDS | 35.0% |
TTGGACTCTAATATTGGACA+TGG | - | tig0024468:19475-19494 | Msa1417300:intron | 35.0% | |
GGAATTACAGAATCAGATGT+TGG | - | tig0024468:19577-19596 | Msa1417300:intron | 35.0% | |
! | TCATATAACTTGTGGAGAAG+TGG | + | tig0024468:19695-19714 | None:intergenic | 35.0% |
CTCCACAAGTTATATGATCA+AGG | - | tig0024468:19698-19717 | Msa1417300:intron | 35.0% | |
CTCCTTGATCATATAACTTG+TGG | + | tig0024468:19703-19722 | None:intergenic | 35.0% | |
!! | AAAGCTGGTAATTTGCTATG+TGG | - | tig0024468:19778-19797 | Msa1417300:intron | 35.0% |
CATATTGTGTTGTCAAAGCT+TGG | - | tig0024468:19944-19963 | Msa1417300:intron | 35.0% | |
AAGCTTGGTTAAATTGTGCA+AGG | - | tig0024468:19959-19978 | Msa1417300:intron | 35.0% | |
ATCTACACCCTATATACTTG+TGG | - | tig0024468:19999-20018 | Msa1417300:intron | 35.0% | |
CCTAAATAACAACTGTAGCA+AGG | + | tig0024468:20046-20065 | None:intergenic | 35.0% | |
!! | CCTTGCTACAGTTGTTATTT+AGG | - | tig0024468:20043-20062 | Msa1417300:intron | 35.0% |
TAACCTATTCATGTGGTTCT+AGG | - | tig0024468:20221-20240 | Msa1417300:intron | 35.0% | |
ATACCTAGAACCACATGAAT+AGG | + | tig0024468:20227-20246 | None:intergenic | 35.0% | |
!! | TATTCATGTGGTTCTAGGTA+TGG | - | tig0024468:20226-20245 | Msa1417300:intron | 35.0% |
TGTATATCTACCTTTGTTGC+AGG | - | tig0024468:20279-20298 | Msa1417300:intron | 35.0% | |
ACCTGAAAATATGTTTGGCA+AGG | - | tig0024468:20333-20352 | Msa1417300:intron | 35.0% | |
! | ACCTTGCCAAACATATTTTC+AGG | + | tig0024468:20337-20356 | None:intergenic | 35.0% |
TTTAGGAACAAACAAGGATC+AGG | + | tig0024468:20444-20463 | None:intergenic | 35.0% | |
AATATGGTTAGCAGATCATG+TGG | - | tig0024468:20471-20490 | Msa1417300:intron | 35.0% | |
AAGAAAGAGTTGAAAGCTCT+TGG | - | tig0024468:20784-20803 | Msa1417300:intron | 35.0% | |
CAGGAAATTTGTCATACTGT+TGG | + | tig0024468:20914-20933 | None:intergenic | 35.0% | |
CTACGAGATATAAGACTTTC+AGG | + | tig0024468:20933-20952 | None:intergenic | 35.0% | |
CTCTAGCACAAAGTTAAAAC+CGG | + | tig0024468:20983-21002 | None:intergenic | 35.0% | |
TTTATCCCTTTCCTTAGTGA+AGG | - | tig0024468:21098-21117 | Msa1417300:intron | 35.0% | |
CAAAATCCTTCACTAAGGAA+AGG | + | tig0024468:21107-21126 | None:intergenic | 35.0% | |
! | ACAAATGGGCTTCAAGAAAT+AGG | + | tig0024468:21390-21409 | None:intergenic | 35.0% |
TATTTCTTGAAGCCCATTTG+TGG | - | tig0024468:21389-21408 | Msa1417300:intron | 35.0% | |
GAACTTTATGGTACCACAAA+TGG | + | tig0024468:21405-21424 | None:intergenic | 35.0% | |
! | TTGAGCAAAACTCTTGCTTT+TGG | - | tig0024468:21739-21758 | Msa1417300:intron | 35.0% |
TGTATCAAGTAACGCAACAT+AGG | + | tig0024468:21769-21788 | None:intergenic | 35.0% | |
TTTGTGACAAGTGTGTCAAA+AGG | - | tig0024468:21813-21832 | Msa1417300:intron | 35.0% | |
TTACCGAGTTTGGCAAATAA+AGG | - | tig0024468:21925-21944 | Msa1417300:intron | 35.0% | |
ATTCAAATTGATGAAGCCAG+CGG | - | tig0024468:22081-22100 | Msa1417300:intron | 35.0% | |
TGGTTGCAACAAAATAATGC+CGG | + | tig0024468:22323-22342 | None:intergenic | 35.0% | |
AGCATGGTGAAAATACAGTT+TGG | + | tig0024468:22343-22362 | None:intergenic | 35.0% | |
! | AATGGCATTGTTGATTGCAA+TGG | - | tig0024468:22393-22412 | Msa1417300:intron | 35.0% |
ACCAAATTGGGTATAAATGG+TGG | + | tig0024468:22666-22685 | None:intergenic | 35.0% | |
ACCATTTATACCCAATTTGG+TGG | - | tig0024468:22665-22684 | Msa1417300:intron | 35.0% | |
ACCACCAAATTGGGTATAAA+TGG | + | tig0024468:22669-22688 | None:intergenic | 35.0% | |
! | ACCCAATTTGGTGGTATAAA+TGG | - | tig0024468:22674-22693 | Msa1417300:intron | 35.0% |
GTCCATTTATACCACCAAAT+TGG | + | tig0024468:22679-22698 | None:intergenic | 35.0% | |
!!! | ATTTTAGAGTTTTGGATGGG+TGG | + | tig0024468:22777-22796 | None:intergenic | 35.0% |
! | ACCCATCCAAAACTCTAAAA+TGG | - | tig0024468:22776-22795 | Msa1417300:intron | 35.0% |
!!! | CCCATTTTAGAGTTTTGGAT+GGG | + | tig0024468:22780-22799 | None:intergenic | 35.0% |
!! | CCCATCCAAAACTCTAAAAT+GGG | - | tig0024468:22777-22796 | Msa1417300:intron | 35.0% |
!!! | ACCCATTTTAGAGTTTTGGA+TGG | + | tig0024468:22781-22800 | None:intergenic | 35.0% |
ACTCATGTGGAACCAATTAT+CGG | - | tig0024468:22921-22940 | Msa1417300:intron | 35.0% | |
! | AAGAGCATAAATATGTGTGG+TGG | + | tig0024468:22981-23000 | None:intergenic | 35.0% |
GCAAAAACACATTTATACCC+AGG | + | tig0024468:23062-23081 | None:intergenic | 35.0% | |
!!! | GACTTGCTGAAAGATTGTTT+TGG | - | tig0024468:23096-23115 | Msa1417300:intron | 35.0% |
TGAGGGAATTCAAAATGCAA+GGG | + | tig0024468:23334-23353 | None:intergenic | 35.0% | |
TTGAGGGAATTCAAAATGCA+AGG | + | tig0024468:23335-23354 | None:intergenic | 35.0% | |
TTCAATACATCCCACTAGTA+TGG | + | tig0024468:23389-23408 | None:intergenic | 35.0% | |
TCATACTGCATGTAGGTAAA+GGG | + | tig0024468:23511-23530 | None:intergenic | 35.0% | |
ATCATACTGCATGTAGGTAA+AGG | + | tig0024468:23512-23531 | None:intergenic | 35.0% | |
CCTACATGCAGTATGATTAT+CGG | - | tig0024468:23515-23534 | Msa1417300:intron | 35.0% | |
CTACATGCAGTATGATTATC+GGG | - | tig0024468:23516-23535 | Msa1417300:intron | 35.0% | |
TACATGCAGTATGATTATCG+GGG | - | tig0024468:23517-23536 | Msa1417300:intron | 35.0% | |
AGTTGGAGCATAGTTGAAAA+AGG | + | tig0024468:23674-23693 | None:intergenic | 35.0% | |
ACATAACATTGTTTGTGCCT+TGG | - | tig0024468:23754-23773 | Msa1417300:intron | 35.0% | |
GCTAACATTCTCAGAGAAAA+AGG | - | tig0024468:23809-23828 | Msa1417300:intron | 35.0% | |
!!! | ACAGAGTGTTGACTTAGTTT+TGG | - | tig0024468:23832-23851 | Msa1417300:intron | 35.0% |
TGGAAAGCAAACCACTTAAA+TGG | - | tig0024468:23852-23871 | Msa1417300:intron | 35.0% | |
CAGTATATGTTAGGGCTTTA+AGG | - | tig0024468:23925-23944 | Msa1417300:intron | 35.0% | |
ATCTAGCAGGAAAACACTTT+GGG | - | tig0024468:23983-24002 | Msa1417300:intron | 35.0% | |
ATATATAGAAACACATGCGG+GGG | + | tig0024468:24555-24574 | None:intergenic | 35.0% | |
CATATATAGAAACACATGCG+GGG | + | tig0024468:24556-24575 | None:intergenic | 35.0% | |
! | ATAGAGCACTATGCTCAATA+AGG | - | tig0024468:24579-24598 | Msa1417300:CDS | 35.0% |
GAAATGCAAGAGAGTTGGAT+AGG | + | tig0024468:15531-15550 | None:intergenic | 40.0% | |
TGTGTGAGTGAACGGAAAAT+AGG | + | tig0024468:15655-15674 | None:intergenic | 40.0% | |
GGTTTGACATTGAAAGGGAA+CGG | + | tig0024468:15694-15713 | None:intergenic | 40.0% | |
TGGAGGGTTTGACATTGAAA+GGG | + | tig0024468:15699-15718 | None:intergenic | 40.0% | |
ATTGCGCAATCGCATTTCTT+CGG | + | tig0024468:15872-15891 | None:intergenic | 40.0% | |
AAGAAATGCGATTGCGCAAT+TGG | - | tig0024468:15872-15891 | Msa1417300:CDS | 40.0% | |
! | GTTGGTGCTTCTTAGGTATT+TGG | - | tig0024468:16070-16089 | Msa1417300:intron | 40.0% |
!! | TGCGATGATTTTAGGTGTCA+AGG | - | tig0024468:16125-16144 | Msa1417300:intron | 40.0% |
TTTCCTAACGAACAATGCCT+CGG | + | tig0024468:16191-16210 | None:intergenic | 40.0% | |
CAAGTGAAAGAGTTACTACC+TGG | + | tig0024468:16234-16253 | None:intergenic | 40.0% | |
!! | AGGGTTAGTTTGGTTCAATG+GGG | - | tig0024468:16263-16282 | Msa1417300:intron | 40.0% |
! | TTAGTTTGGTTCAATGGGGA+GGG | - | tig0024468:16267-16286 | Msa1417300:intron | 40.0% |
GGAGAAATGGTTAAAGAGGA+AGG | - | tig0024468:16349-16368 | Msa1417300:intron | 40.0% | |
TGGAAATTCACATTCGCCAA+GGG | - | tig0024468:16417-16436 | Msa1417300:CDS | 40.0% | |
ATTGTTAGGCTGGACATTTG+CGG | + | tig0024468:16469-16488 | None:intergenic | 40.0% | |
CAATGTTGAGATTGTTAGGC+TGG | + | tig0024468:16479-16498 | None:intergenic | 40.0% | |
ATCTCTCTCCTTCATCTGTA+GGG | + | tig0024468:16515-16534 | None:intergenic | 40.0% | |
AATCTCTCTCCTTCATCTGT+AGG | + | tig0024468:16516-16535 | None:intergenic | 40.0% | |
!! | GTTCAATTTTTGAGAGAGGG+TGG | + | tig0024468:16647-16666 | None:intergenic | 40.0% |
!! | TATTGGTTCCAAGGAAATGG+GGG | + | tig0024468:16700-16719 | None:intergenic | 40.0% |
!! | CTATTGGTTCCAAGGAAATG+GGG | + | tig0024468:16701-16720 | None:intergenic | 40.0% |
!! | CCTATTGGTTCCAAGGAAAT+GGG | + | tig0024468:16702-16721 | None:intergenic | 40.0% |
TGTTCCATTTCACTTTGCTC+TGG | - | tig0024468:16921-16940 | Msa1417300:intron | 40.0% | |
ACAACCAGAGCAAAGTGAAA+TGG | + | tig0024468:16928-16947 | None:intergenic | 40.0% | |
TAACAATGTGAGACTCCAAC+GGG | - | tig0024468:17030-17049 | Msa1417300:intron | 40.0% | |
GAGAATGGCAAAGTAGGAAT+TGG | + | tig0024468:17064-17083 | None:intergenic | 40.0% | |
TACTCAGAGAATGGCAAAGT+AGG | + | tig0024468:17070-17089 | None:intergenic | 40.0% | |
ACTTAAAAAGTGGAGTGGAG+AGG | + | tig0024468:17162-17181 | None:intergenic | 40.0% | |
! | TTTCTTAGCTTAGCTTGGTG+AGG | - | tig0024468:17284-17303 | Msa1417300:intron | 40.0% |
TATACGTTCGCAATTCGCTT+CGG | - | tig0024468:17323-17342 | Msa1417300:intron | 40.0% | |
! | CGAATTCTGAGAGTGATGAA+TGG | + | tig0024468:17372-17391 | None:intergenic | 40.0% |
TATACATAGTCGGTACGCTA+TGG | - | tig0024468:17404-17423 | Msa1417300:intron | 40.0% | |
ATACATAGTCGGTACGCTAT+GGG | - | tig0024468:17405-17424 | Msa1417300:intron | 40.0% | |
AGAAGTAAAAGTCCCACATC+GGG | - | tig0024468:17533-17552 | Msa1417300:intron | 40.0% | |
GGCACTTACTACACATTGAT+AGG | - | tig0024468:17554-17573 | Msa1417300:intron | 40.0% | |
GCCTGGCAATATATATTGGT+GGG | - | tig0024468:17636-17655 | Msa1417300:CDS | 40.0% | |
CCTGGCAATATATATTGGTG+GGG | - | tig0024468:17637-17656 | Msa1417300:CDS | 40.0% | |
ATATATATTGGTGGGGCCAA+TGG | - | tig0024468:17644-17663 | Msa1417300:CDS | 40.0% | |
GCATGGAATTCGACAATTGT+AGG | + | tig0024468:17772-17791 | None:intergenic | 40.0% | |
GTCGAATTCCATGCGAATTA+TGG | - | tig0024468:17778-17797 | Msa1417300:intron | 40.0% | |
CATGCGAATTATGGGTAAAC+CGG | - | tig0024468:17787-17806 | Msa1417300:intron | 40.0% | |
TGGACAGATAACATTGTGAG+GGG | - | tig0024468:18161-18180 | Msa1417300:intron | 40.0% | |
TGAAGTTGTTGTCATGTGAC+TGG | - | tig0024468:18202-18221 | Msa1417300:intron | 40.0% | |
CGTACAATACACCAAAAGGT+GGG | - | tig0024468:18283-18302 | Msa1417300:intron | 40.0% | |
TAGCAAACGCTAACTCCTAT+TGG | + | tig0024468:18443-18462 | None:intergenic | 40.0% | |
GTGTCCGTAAGGTAATTTAG+AGG | - | tig0024468:18478-18497 | Msa1417300:intron | 40.0% | |
!!! | CTGTACTGTTTTGAAGATCG+AGG | - | tig0024468:18675-18694 | Msa1417300:CDS | 40.0% |
AACTTACTCCTTCTTTGGCA+AGG | - | tig0024468:18724-18743 | Msa1417300:intron | 40.0% | |
TACGGACTTCCTGAAGAAAA+AGG | + | tig0024468:18914-18933 | None:intergenic | 40.0% | |
! | CCACTTCAATGGTAGTGATA+CGG | + | tig0024468:18932-18951 | None:intergenic | 40.0% |
! | GGATATAATTGGTGTTCCTG+GGG | - | tig0024468:19026-19045 | Msa1417300:intron | 40.0% |
TATGGTATGTATGTGCTGTC+TGG | - | tig0024468:19050-19069 | Msa1417300:intron | 40.0% | |
CAATAAAACAGCACTGTGGA+AGG | + | tig0024468:19667-19686 | None:intergenic | 40.0% | |
GATGCAATAAAACAGCACTG+TGG | + | tig0024468:19671-19690 | None:intergenic | 40.0% | |
GGTTAAATTGTGCAAGGACT+CGG | - | tig0024468:19965-19984 | Msa1417300:intron | 40.0% | |
GTTAAATTGTGCAAGGACTC+GGG | - | tig0024468:19966-19985 | Msa1417300:intron | 40.0% | |
TCTTGTAGAACCTGCAACAA+AGG | + | tig0024468:20292-20311 | None:intergenic | 40.0% | |
ATTGGGCCTAAGCTTTCATA+TGG | - | tig0024468:20538-20557 | Msa1417300:intron | 40.0% | |
TTGGGCCTAAGCTTTCATAT+GGG | - | tig0024468:20539-20558 | Msa1417300:intron | 40.0% | |
AAAGAACTTGCAATAGCTCC+TGG | + | tig0024468:20828-20847 | None:intergenic | 40.0% | |
!! | GTGCTAGAGATTTTGAGAGT+AGG | - | tig0024468:20994-21013 | Msa1417300:intron | 40.0% |
TGGTTGAATTTAGAGAGGCT+CGG | - | tig0024468:21511-21530 | Msa1417300:CDS | 40.0% | |
TCTCAAACAGCTATTCTCAC+TGG | - | tig0024468:21558-21577 | Msa1417300:intron | 40.0% | |
! | TTCTCACTGGCTGAAAAGTT+TGG | - | tig0024468:21571-21590 | Msa1417300:intron | 40.0% |
!! | TGCATCAAGTTGAAGCCATT+TGG | + | tig0024468:21602-21621 | None:intergenic | 40.0% |
CAATGCCAGTGTAATAAGCA+AGG | + | tig0024468:21639-21658 | None:intergenic | 40.0% | |
TTACACTGGCATTGTCTTTG+AGG | - | tig0024468:21645-21664 | Msa1417300:intron | 40.0% | |
TGACACACTTGTCACAAAAG+CGG | + | tig0024468:21811-21830 | None:intergenic | 40.0% | |
ACATGCATGATTACCGAGTT+TGG | - | tig0024468:21915-21934 | Msa1417300:intron | 40.0% | |
! | CAGCCTTTATTTGCCAAACT+CGG | + | tig0024468:21931-21950 | None:intergenic | 40.0% |
AGTTTGGCAAATAAAGGCTG+AGG | - | tig0024468:21931-21950 | Msa1417300:intron | 40.0% | |
ACCAAAGATCTTACATGCCA+AGG | + | tig0024468:22107-22126 | None:intergenic | 40.0% | |
GCCACCATTTATACCCAATT+TGG | - | tig0024468:22662-22681 | Msa1417300:intron | 40.0% | |
!!! | TGGGACCCATTTTAGAGTTT+TGG | + | tig0024468:22785-22804 | None:intergenic | 40.0% |
! | CAAAGGCCTTTTCAATGAGT+GGG | + | tig0024468:22836-22855 | None:intergenic | 40.0% |
! | ACAAAGGCCTTTTCAATGAG+TGG | + | tig0024468:22837-22856 | None:intergenic | 40.0% |
! | GATAATTGGTTCCACATGAG+TGG | + | tig0024468:22922-22941 | None:intergenic | 40.0% |
ATACATCCCACTAGTATGGT+GGG | + | tig0024468:23385-23404 | None:intergenic | 40.0% | |
AATACATCCCACTAGTATGG+TGG | + | tig0024468:23386-23405 | None:intergenic | 40.0% | |
!!! | AAGGTGTTTTGGGTTTACTC+TGG | - | tig0024468:23482-23501 | Msa1417300:intron | 40.0% |
CCGATAATCATACTGCATGT+AGG | + | tig0024468:23518-23537 | None:intergenic | 40.0% | |
GCACGCAACACTGTAATATT+TGG | - | tig0024468:23539-23558 | Msa1417300:intron | 40.0% | |
TGGAGCATAGTTGAAAAAGG+AGG | + | tig0024468:23671-23690 | None:intergenic | 40.0% | |
CCTTGGATGAAGAACTTCAA+GGG | - | tig0024468:23771-23790 | Msa1417300:intron | 40.0% | |
GTATCGTGCCATCATTTGAT+TGG | - | tig0024468:23947-23966 | Msa1417300:intron | 40.0% | |
CAGCTACACCAATCAAATGA+TGG | + | tig0024468:23958-23977 | None:intergenic | 40.0% | |
CATCTAGCAGGAAAACACTT+TGG | - | tig0024468:23982-24001 | Msa1417300:intron | 40.0% | |
GAGTTGAATCGTGCTAACTA+TGG | - | tig0024468:24222-24241 | Msa1417300:intron | 40.0% | |
CGTGCTAACTATGGTAGTTA+TGG | - | tig0024468:24231-24250 | Msa1417300:intron | 40.0% | |
CACCCTAAAGGAGAATAAAG+AGG | + | tig0024468:24312-24331 | None:intergenic | 40.0% | |
TAGGAAATTCTGAGTGGCAA+AGG | - | tig0024468:24375-24394 | Msa1417300:CDS | 40.0% | |
AGGAAATTCTGAGTGGCAAA+GGG | - | tig0024468:24376-24395 | Msa1417300:CDS | 40.0% | |
TATATAGAAACACATGCGGG+GGG | + | tig0024468:24554-24573 | None:intergenic | 40.0% | |
CGATGGAAATGCAAGAGAGT+TGG | + | tig0024468:15536-15555 | None:intergenic | 45.0% | |
AGTGAAGCTAAGCTTGACGA+TGG | + | tig0024468:15553-15572 | None:intergenic | 45.0% | |
GAACACGAAAATGGAGTTGC+AGG | + | tig0024468:15592-15611 | None:intergenic | 45.0% | |
!! | AGAGTTGGTGTGTGAGTGAA+CGG | + | tig0024468:15663-15682 | None:intergenic | 45.0% |
ATTGAAAGGGAACGGTGAAG+AGG | + | tig0024468:15686-15705 | None:intergenic | 45.0% | |
GTGGAGGGTTTGACATTGAA+AGG | + | tig0024468:15700-15719 | None:intergenic | 45.0% | |
!! | GTCGATTTTCTGAACTTCGC+CGG | + | tig0024468:15815-15834 | None:intergenic | 45.0% |
AATCGACGTGAATCCTCCTA+AGG | - | tig0024468:15828-15847 | Msa1417300:CDS | 45.0% | |
ATCGACGTGAATCCTCCTAA+GGG | - | tig0024468:15829-15848 | Msa1417300:CDS | 45.0% | |
TTGCGCAATCGCATTTCTTC+GGG | + | tig0024468:15871-15890 | None:intergenic | 45.0% | |
! | TGTCTGTGTTGGTGCTTCTT+AGG | - | tig0024468:16063-16082 | Msa1417300:intron | 45.0% |
GTCAAGGTTGTACGGATTTG+AGG | - | tig0024468:16141-16160 | Msa1417300:intron | 45.0% | |
GCATTGTTCGTTAGGAAAGC+AGG | - | tig0024468:16193-16212 | Msa1417300:intron | 45.0% | |
GAAAGCAGGAGAGGAGATTA+AGG | - | tig0024468:16207-16226 | Msa1417300:intron | 45.0% | |
! | GTTAGTTTGGTTCAATGGGG+AGG | - | tig0024468:16266-16285 | Msa1417300:intron | 45.0% |
! | TAGTTTGGTTCAATGGGGAG+GGG | - | tig0024468:16268-16287 | Msa1417300:intron | 45.0% |
CTTGGCGAATGTGAATTTCC+AGG | + | tig0024468:16418-16437 | None:intergenic | 45.0% | |
CTGGAAATTCACATTCGCCA+AGG | - | tig0024468:16416-16435 | Msa1417300:CDS | 45.0% | |
GGAAATTCACATTCGCCAAG+GGG | - | tig0024468:16418-16437 | Msa1417300:CDS | 45.0% | |
GAATTAGGCCCTACAGATGA+AGG | - | tig0024468:16504-16523 | Msa1417300:intron | 45.0% | |
! | ATTGGTTCCAAGGAAATGGG+GGG | + | tig0024468:16699-16718 | None:intergenic | 45.0% |
CCCATTTCCTTGGAACCAAT+AGG | - | tig0024468:16699-16718 | Msa1417300:intron | 45.0% | |
!! | GCCTATTGGTTCCAAGGAAA+TGG | + | tig0024468:16703-16722 | None:intergenic | 45.0% |
!! | TAAGGAGCCTATTGGTTCCA+AGG | + | tig0024468:16709-16728 | None:intergenic | 45.0% |
GAGTTGTGTGTGTGTGTGTT+GGG | + | tig0024468:17002-17021 | None:intergenic | 45.0% | |
ACTCTCAGAATTCGGTACGT+AGG | - | tig0024468:17378-17397 | Msa1417300:intron | 45.0% | |
CTCTCAGAATTCGGTACGTA+GGG | - | tig0024468:17379-17398 | Msa1417300:intron | 45.0% | |
TCTCAGAATTCGGTACGTAG+GGG | - | tig0024468:17380-17399 | Msa1417300:intron | 45.0% | |
! | ACGTAGGGGGTATACATAGT+CGG | - | tig0024468:17394-17413 | Msa1417300:intron | 45.0% |
!! | CGTGGCTGGTAGTTTGTTTA+AGG | + | tig0024468:17617-17636 | None:intergenic | 45.0% |
CCAATATATATTGCCAGGCG+TGG | + | tig0024468:17635-17654 | None:intergenic | 45.0% | |
CCACGCCTGGCAATATATAT+TGG | - | tig0024468:17632-17651 | Msa1417300:CDS | 45.0% | |
CGCCTGGCAATATATATTGG+TGG | - | tig0024468:17635-17654 | Msa1417300:CDS | 45.0% | |
CCCCACCAATATATATTGCC+AGG | + | tig0024468:17640-17659 | None:intergenic | 45.0% | |
!!! | GATTTTTGTGAGGGGTACTC+TGG | - | tig0024468:17743-17762 | Msa1417300:intron | 45.0% |
CGGTTTACCCATAATTCGCA+TGG | + | tig0024468:17789-17808 | None:intergenic | 45.0% | |
! | TTCGCGGTACTTTTACGAAC+CGG | + | tig0024468:17809-17828 | None:intergenic | 45.0% |
!! | TTCGTAAAAGTACCGCGAAC+CGG | - | tig0024468:17810-17829 | Msa1417300:intron | 45.0% |
GTTGTAAACAAACTTGGGGC+AGG | - | tig0024468:18048-18067 | Msa1417300:intron | 45.0% | |
GTTGTTGTCATGTGACTGGA+AGG | - | tig0024468:18206-18225 | Msa1417300:intron | 45.0% | |
GCTGCGTACAATACACCAAA+AGG | - | tig0024468:18279-18298 | Msa1417300:intron | 45.0% | |
GCGTACAATACACCAAAAGG+TGG | - | tig0024468:18282-18301 | Msa1417300:intron | 45.0% | |
CTAAAGCTCCAGTATACGCA+GGG | + | tig0024468:18322-18341 | None:intergenic | 45.0% | |
ACTAAAGCTCCAGTATACGC+AGG | + | tig0024468:18323-18342 | None:intergenic | 45.0% | |
TGTCCATAAAACGGACAACC+TGG | + | tig0024468:18349-18368 | None:intergenic | 45.0% | |
AGAGTCATGATGTGTCCGTA+AGG | - | tig0024468:18467-18486 | Msa1417300:intron | 45.0% | |
CAAAGCACAGGAGAACTCAA+TGG | + | tig0024468:18508-18527 | None:intergenic | 45.0% | |
TGAGTTCTCCTGTGCTTTGA+TGG | - | tig0024468:18509-18528 | Msa1417300:intron | 45.0% | |
CACAATTGCCATCAAAGCAC+AGG | + | tig0024468:18520-18539 | None:intergenic | 45.0% | |
GCCTGAACTTACTCCTTCTT+TGG | - | tig0024468:18719-18738 | Msa1417300:intron | 45.0% | |
GCCAAAGAAGGAGTAAGTTC+AGG | + | tig0024468:18723-18742 | None:intergenic | 45.0% | |
CAAGGCTGGTGATACAGAAA+GGG | - | tig0024468:18742-18761 | Msa1417300:intron | 45.0% | |
CCGTATCACTACCATTGAAG+TGG | - | tig0024468:18929-18948 | Msa1417300:intron | 45.0% | |
CCAACAGTGAACCACTTCAA+TGG | + | tig0024468:18943-18962 | None:intergenic | 45.0% | |
CCATTGAAGTGGTTCACTGT+TGG | - | tig0024468:18940-18959 | Msa1417300:intron | 45.0% | |
GGTTCACTGTTGGACAATGT+TGG | - | tig0024468:18950-18969 | Msa1417300:intron | 45.0% | |
TCACTGTTGGACAATGTTGG+CGG | - | tig0024468:18953-18972 | Msa1417300:intron | 45.0% | |
GCGGTATGAGAGAATGACAA+GGG | - | tig0024468:18972-18991 | Msa1417300:intron | 45.0% | |
CGGTATGAGAGAATGACAAG+GGG | - | tig0024468:18973-18992 | Msa1417300:intron | 45.0% | |
GGTATGAGAGAATGACAAGG+GGG | - | tig0024468:18974-18993 | Msa1417300:intron | 45.0% | |
! | TATTCCACTGGTAGTGCTCA+CGG | + | tig0024468:19005-19024 | None:intergenic | 45.0% |
TGAGCACTACCAGTGGAATA+TGG | - | tig0024468:19005-19024 | Msa1417300:intron | 45.0% | |
! | AATTGGTGTTCCTGGGGTTA+TGG | - | tig0024468:19032-19051 | Msa1417300:intron | 45.0% |
CACATACATACCATAACCCC+AGG | + | tig0024468:19045-19064 | None:intergenic | 45.0% | |
!! | AGGTTTCTAGTCGAAAGGTG+TGG | - | tig0024468:19605-19624 | Msa1417300:intron | 45.0% |
!! | GGTTTCTAGTCGAAAGGTGT+GGG | - | tig0024468:19606-19625 | Msa1417300:intron | 45.0% |
TGTGCTAAGTGCAGCAATAG+AGG | - | tig0024468:19902-19921 | Msa1417300:CDS | 45.0% | |
GTGCTAAGTGCAGCAATAGA+GGG | - | tig0024468:19903-19922 | Msa1417300:CDS | 45.0% | |
TGGGCCTAAGCTTTCATATG+GGG | - | tig0024468:20540-20559 | Msa1417300:intron | 45.0% | |
ACCACCCCATATGAAAGCTT+AGG | + | tig0024468:20547-20566 | None:intergenic | 45.0% | |
GAAAGCTCTTGGTCTATCAC+AGG | - | tig0024468:20795-20814 | Msa1417300:intron | 45.0% | |
AAGTCATTGGCCGAGTTAGA+AGG | - | tig0024468:20853-20872 | Msa1417300:intron | 45.0% | |
AAAGAGCGGACCTTCTAACT+CGG | + | tig0024468:20866-20885 | None:intergenic | 45.0% | |
! | AAGCCTTATCCCACTAAGTG+GGG | + | tig0024468:21300-21319 | None:intergenic | 45.0% |
! | CAAGCCTTATCCCACTAAGT+GGG | + | tig0024468:21301-21320 | None:intergenic | 45.0% |
TTGAATTTAGAGAGGCTCGG+AGG | - | tig0024468:21514-21533 | Msa1417300:CDS | 45.0% | |
TGAATTTAGAGAGGCTCGGA+GGG | - | tig0024468:21515-21534 | Msa1417300:CDS | 45.0% | |
CTTGATGCATCAGTTGTTCG+TGG | - | tig0024468:21613-21632 | Msa1417300:intron | 45.0% | |
GACACACTTGTCACAAAAGC+GGG | + | tig0024468:21810-21829 | None:intergenic | 45.0% | |
GCCTTGGCATGTAAGATCTT+TGG | - | tig0024468:22103-22122 | Msa1417300:intron | 45.0% | |
TGTAACTGCAATGGGAAGCA+TGG | + | tig0024468:22359-22378 | None:intergenic | 45.0% | |
!! | CATTAGGGTTTTGACCGTGA+AGG | - | tig0024468:22498-22517 | Msa1417300:intron | 45.0% |
! | GACATTCCTGCTTGTGGTTT+TGG | - | tig0024468:22585-22604 | Msa1417300:intron | 45.0% |
CCAAATCCAAAACCACAAGC+AGG | + | tig0024468:22594-22613 | None:intergenic | 45.0% | |
!!! | CCTGCTTGTGGTTTTGGATT+TGG | - | tig0024468:22591-22610 | Msa1417300:intron | 45.0% |
!!! | AGAGTTTTGGATGGGTGGTA+TGG | + | tig0024468:22772-22791 | None:intergenic | 45.0% |
ATGGGTCCCACTCATTGAAA+AGG | - | tig0024468:22827-22846 | Msa1417300:intron | 45.0% | |
TGAGTGGCATTACTCACCTA+CGG | + | tig0024468:22906-22925 | None:intergenic | 45.0% | |
! | CAAGTTTAAAGCCACTGCCT+CGG | + | tig0024468:22953-22972 | None:intergenic | 45.0% |
!! | TGTTTTGGGCAATGCCCATT+AGG | - | tig0024468:23111-23130 | Msa1417300:intron | 45.0% |
!! | GTTTTGGGCAATGCCCATTA+GGG | - | tig0024468:23112-23131 | Msa1417300:intron | 45.0% |
CAAGTTGCCAAGTCCCTAAT+GGG | + | tig0024468:23128-23147 | None:intergenic | 45.0% | |
! | TCAAGTTGCCAAGTCCCTAA+TGG | + | tig0024468:23129-23148 | None:intergenic | 45.0% |
!! | TATGGTGGGTTGTGTTTCGA+TGG | + | tig0024468:23371-23390 | None:intergenic | 45.0% |
AACACAACCCACCATACTAG+TGG | - | tig0024468:23375-23394 | Msa1417300:intron | 45.0% | |
ACACAACCCACCATACTAGT+GGG | - | tig0024468:23376-23395 | Msa1417300:intron | 45.0% | |
CAACAGTTGCTCAGAGAGAA+GGG | - | tig0024468:23704-23723 | Msa1417300:intron | 45.0% | |
GCCTTGGATGAAGAACTTCA+AGG | - | tig0024468:23770-23789 | Msa1417300:intron | 45.0% | |
CCCTTGAAGTTCTTCATCCA+AGG | + | tig0024468:23774-23793 | None:intergenic | 45.0% | |
TGTAGCTGACAACATCTAGC+AGG | - | tig0024468:23970-23989 | Msa1417300:intron | 45.0% | |
AGCACGTTTGAACACCCTAA+AGG | + | tig0024468:24324-24343 | None:intergenic | 45.0% | |
GGAAATTCTGAGTGGCAAAG+GGG | - | tig0024468:24377-24396 | Msa1417300:CDS | 45.0% | |
CGTGTCAAAATTCTCTCCAC+TGG | - | tig0024468:24407-24426 | Msa1417300:CDS | 45.0% | |
AACCTCGTATTGTTCACCAG+TGG | + | tig0024468:24426-24445 | None:intergenic | 45.0% | |
ATATAGAAACACATGCGGGG+GGG | + | tig0024468:24553-24572 | None:intergenic | 45.0% | |
TGCAAGAGAGTTGGATAGGG+AGG | + | tig0024468:15527-15546 | None:intergenic | 50.0% | |
GAGTGCACAGTGGAATCTGA+CGG | + | tig0024468:15722-15741 | None:intergenic | 50.0% | |
AAATCACGCGTACCCTTAGG+AGG | + | tig0024468:15844-15863 | None:intergenic | 50.0% | |
! | TTTTCCAGTGCTTGAGTCCG+AGG | - | tig0024468:16171-16190 | Msa1417300:intron | 50.0% |
!! | AGTCCGAGGCATTGTTCGTT+AGG | - | tig0024468:16185-16204 | Msa1417300:intron | 50.0% |
GTTCGTTAGGAAAGCAGGAG+AGG | - | tig0024468:16198-16217 | Msa1417300:intron | 50.0% | |
AGGAGAGGAGATTAAGGACC+AGG | - | tig0024468:16213-16232 | Msa1417300:intron | 50.0% | |
GTGGAATGACAAACACCACC+TGG | - | tig0024468:16397-16416 | Msa1417300:CDS | 50.0% | |
GGCGAATGTGAATTTCCAGG+TGG | + | tig0024468:16415-16434 | None:intergenic | 50.0% | |
! | GGTGGTTAGTCAGGTAACCT+AGG | + | tig0024468:16448-16467 | None:intergenic | 50.0% |
! | GACATTTGCGGTGGTTAGTC+AGG | + | tig0024468:16457-16476 | None:intergenic | 50.0% |
ATCTCTTCCCCCCATTTCCT+TGG | - | tig0024468:16689-16708 | Msa1417300:intron | 50.0% | |
CGAGTTGTGTGTGTGTGTGT+TGG | + | tig0024468:17003-17022 | None:intergenic | 50.0% | |
GAATTGGATCCAGAACCCGT+TGG | + | tig0024468:17048-17067 | None:intergenic | 50.0% | |
ATTCGCTTCGGTACGTGGTA+CGG | - | tig0024468:17335-17354 | Msa1417300:intron | 50.0% | |
CTCAGAATTCGGTACGTAGG+GGG | - | tig0024468:17381-17400 | Msa1417300:intron | 50.0% | |
GTGTAGTAAGTGCCCGATGT+GGG | + | tig0024468:17548-17567 | None:intergenic | 50.0% | |
TGTGTAGTAAGTGCCCGATG+TGG | + | tig0024468:17549-17568 | None:intergenic | 50.0% | |
TATATATTGCCAGGCGTGGC+TGG | + | tig0024468:17631-17650 | None:intergenic | 50.0% | |
CAACTTCACCAGTTGCGCAA+AGG | + | tig0024468:18190-18209 | None:intergenic | 50.0% | |
GTCATGTGACTGGAAGGTCA+CGG | - | tig0024468:18212-18231 | Msa1417300:intron | 50.0% | |
TCATGTGACTGGAAGGTCAC+GGG | - | tig0024468:18213-18232 | Msa1417300:intron | 50.0% | |
AAGGTCACGGGTTCAAGTCA+TGG | - | tig0024468:18225-18244 | Msa1417300:intron | 50.0% | |
! | TACTGGAGCTTTAGTGCACC+AGG | - | tig0024468:18328-18347 | Msa1417300:intron | 50.0% |
! | GCACCAGGTTGTCCGTTTTA+TGG | - | tig0024468:18343-18362 | Msa1417300:intron | 50.0% |
GTAATCGCCGTGTTGCATTG+AGG | - | tig0024468:18697-18716 | Msa1417300:intron | 50.0% | |
GTTCAGGCCTCAATGCAACA+CGG | + | tig0024468:18707-18726 | None:intergenic | 50.0% | |
TACTCCTTCTTTGGCAAGGC+TGG | - | tig0024468:18728-18747 | Msa1417300:intron | 50.0% | |
ATCACCAGCCTTGCCAAAGA+AGG | + | tig0024468:18735-18754 | None:intergenic | 50.0% | |
GCAAGGCTGGTGATACAGAA+AGG | - | tig0024468:18741-18760 | Msa1417300:intron | 50.0% | |
GGCGGTATGAGAGAATGACA+AGG | - | tig0024468:18971-18990 | Msa1417300:intron | 50.0% | |
AAACCACGGTACAAGCTTCC+TGG | + | tig0024468:19122-19141 | None:intergenic | 50.0% | |
GCCTAAGCTTTCATATGGGG+TGG | - | tig0024468:20543-20562 | Msa1417300:intron | 50.0% | |
AGCTCTTGGTCTATCACAGG+AGG | - | tig0024468:20798-20817 | Msa1417300:intron | 50.0% | |
CTTATCCCACTAAGTGGGGT+CGG | + | tig0024468:21296-21315 | None:intergenic | 50.0% | |
! | CCAAGCCTTATCCCACTAAG+TGG | + | tig0024468:21302-21321 | None:intergenic | 50.0% |
CCACTTAGTGGGATAAGGCT+TGG | - | tig0024468:21299-21318 | Msa1417300:intron | 50.0% | |
! | CGTGGCCTTGCTTATTACAC+TGG | - | tig0024468:21631-21650 | Msa1417300:intron | 50.0% |
!! | CTGGCATTGTCTTTGAGGTC+AGG | - | tig0024468:21650-21669 | Msa1417300:intron | 50.0% |
TAGCTCGGAGCTTTCCTTCA+CGG | + | tig0024468:22515-22534 | None:intergenic | 50.0% | |
GCTGATGACATTCCTGCTTG+TGG | - | tig0024468:22579-22598 | Msa1417300:intron | 50.0% | |
GGTGAGTAATGCCACTCATG+TGG | - | tig0024468:22908-22927 | Msa1417300:intron | 50.0% | |
CCTCGGTGGTAACCGATAAT+TGG | + | tig0024468:22936-22955 | None:intergenic | 50.0% | |
! | CCAATTATCGGTTACCACCG+AGG | - | tig0024468:22933-22952 | Msa1417300:intron | 50.0% |
GCAACAGTTGCTCAGAGAGA+AGG | - | tig0024468:23703-23722 | Msa1417300:intron | 50.0% | |
TGTACTTGCAAGCTGAGCTC+TGG | + | tig0024468:23737-23756 | None:intergenic | 50.0% | |
! | ACTTCAAGGGTGTGCTGCTA+TGG | - | tig0024468:23784-23803 | Msa1417300:intron | 50.0% |
CAGACGCTCAGCATTTGTTC+TGG | + | tig0024468:24348-24367 | None:intergenic | 50.0% | |
CAGAACAAATGCTGAGCGTC+TGG | - | tig0024468:24346-24365 | Msa1417300:CDS | 50.0% | |
GCTGAGCGTCTGGTATTAGT+AGG | - | tig0024468:24356-24375 | Msa1417300:CDS | 50.0% | |
TTCTGAGTGGCAAAGGGGTA+TGG | - | tig0024468:24382-24401 | Msa1417300:CDS | 50.0% | |
CTCCACTGGTGAACAATACG+AGG | - | tig0024468:24421-24440 | Msa1417300:CDS | 50.0% | |
GGAACGGTGAAGAGGAGAGT+TGG | + | tig0024468:15678-15697 | None:intergenic | 55.0% | |
CAGTGGAATCTGACGGTGGA+GGG | + | tig0024468:15715-15734 | None:intergenic | 55.0% | |
ACAGTGGAATCTGACGGTGG+AGG | + | tig0024468:15716-15735 | None:intergenic | 55.0% | |
TGCACAGTGGAATCTGACGG+TGG | + | tig0024468:15719-15738 | None:intergenic | 55.0% | |
TAGGAGACAACGCACCAGAC+CGG | + | tig0024468:15780-15799 | None:intergenic | 55.0% | |
TGCGTTGTCTCCTACTCCTC+CGG | - | tig0024468:15786-15805 | Msa1417300:CDS | 55.0% | |
TTCTGAACTTCGCCGGTGAC+CGG | + | tig0024468:15808-15827 | None:intergenic | 55.0% | |
GGGAAATCACGCGTACCCTT+AGG | + | tig0024468:15847-15866 | None:intergenic | 55.0% | |
GCAATCGCATTTCTTCGGGC+GGG | + | tig0024468:15867-15886 | None:intergenic | 55.0% | |
CGCAATCGCATTTCTTCGGG+CGG | + | tig0024468:15868-15887 | None:intergenic | 55.0% | |
AATGCCTCGGACTCAAGCAC+TGG | + | tig0024468:16178-16197 | None:intergenic | 55.0% | |
! | TTTGGTTCAATGGGGAGGGG+AGG | - | tig0024468:16271-16290 | Msa1417300:intron | 55.0% |
TTGGTTCAATGGGGAGGGGA+GGG | - | tig0024468:16272-16291 | Msa1417300:intron | 55.0% | |
AGGGGATTCAAGGGAAGGGA+GGG | - | tig0024468:16291-16310 | Msa1417300:intron | 55.0% | |
ATTCGCCAAGGGGAGATCCT+AGG | - | tig0024468:16428-16447 | Msa1417300:CDS | 55.0% | |
GGTAACCTAGGATCTCCCCT+TGG | + | tig0024468:16436-16455 | None:intergenic | 55.0% | |
GTTAGGCTGGACATTTGCGG+TGG | + | tig0024468:16466-16485 | None:intergenic | 55.0% | |
! | TGTGAGACTCCAACGGGTTC+TGG | - | tig0024468:17036-17055 | Msa1417300:intron | 55.0% |
TCGCAATTCGCTTCGGTACG+TGG | - | tig0024468:17330-17349 | Msa1417300:intron | 55.0% | |
TTCGCTTCGGTACGTGGTAC+GGG | - | tig0024468:17336-17355 | Msa1417300:intron | 55.0% | |
GTCGGTACGCTATGGGTTTG+TGG | - | tig0024468:17412-17431 | Msa1417300:intron | 55.0% | |
AACAAACTACCAGCCACGCC+TGG | - | tig0024468:17619-17638 | Msa1417300:CDS | 55.0% | |
!! | AAGTACCGCGAACCGGTTTG+CGG | - | tig0024468:17817-17836 | Msa1417300:intron | 55.0% |
!! | GAACCGGTTTGCGGTTCTCT+GGG | - | tig0024468:17826-17845 | Msa1417300:intron | 55.0% |
TAGCCCAGAGAACCGCAAAC+CGG | + | tig0024468:17832-17851 | None:intergenic | 55.0% | |
AGGGGTAACCTTTGCGCAAC+TGG | - | tig0024468:18179-18198 | Msa1417300:intron | 55.0% | |
GATCCAGGAAGCTTGTACCG+TGG | - | tig0024468:19116-19135 | Msa1417300:intron | 55.0% | |
GTGCAGCAATAGAGGGCTGA+AGG | - | tig0024468:19910-19929 | Msa1417300:CDS | 55.0% | |
TCTATCACAGGAGGCTGTCC+AGG | - | tig0024468:20807-20826 | Msa1417300:intron | 55.0% | |
CGACCCCACTTAGTGGGATA+AGG | - | tig0024468:21294-21313 | Msa1417300:intron | 55.0% | |
ATTGATGAAGCCAGCGGCCT+TGG | - | tig0024468:22087-22106 | Msa1417300:intron | 55.0% | |
ATCTTACATGCCAAGGCCGC+TGG | + | tig0024468:22100-22119 | None:intergenic | 55.0% | |
GGAAAGCTCCGAGCTATCTG+TGG | - | tig0024468:22519-22538 | Msa1417300:intron | 55.0% | |
AAGCTCCGAGCTATCTGTGG+TGG | - | tig0024468:22522-22541 | Msa1417300:intron | 55.0% | |
GACCACCACCACAGATAGCT+CGG | + | tig0024468:22530-22549 | None:intergenic | 55.0% | |
!! | CAAAGCACCGCTGCCTCATT+TGG | - | tig0024468:22878-22897 | Msa1417300:intron | 55.0% |
! | TACGGTGCCAAATGAGGCAG+CGG | + | tig0024468:22888-22907 | None:intergenic | 55.0% |
! | CTCACCTACGGTGCCAAATG+AGG | + | tig0024468:22894-22913 | None:intergenic | 55.0% |
! | GTTTAAAGCCACTGCCTCGG+TGG | + | tig0024468:22950-22969 | None:intergenic | 55.0% |
GGCAATGCCCATTAGGGACT+TGG | - | tig0024468:23118-23137 | Msa1417300:intron | 55.0% | |
CCACTGTGCACTCTCCCAAG+CGG | - | tig0024468:15729-15748 | Msa1417300:three_prime_UTR | 60.0% | |
AGAATCGGTCTCGGCCGCTT+GGG | + | tig0024468:15746-15765 | None:intergenic | 60.0% | |
TAGAATCGGTCTCGGCCGCT+TGG | + | tig0024468:15747-15766 | None:intergenic | 60.0% | |
! | GCCGAGACCGATTCTACCAG+CGG | - | tig0024468:15751-15770 | Msa1417300:exon | 60.0% |
GCCGCTGGTAGAATCGGTCT+CGG | + | tig0024468:15755-15774 | None:intergenic | 60.0% | |
! | GAGACCGATTCTACCAGCGG+CGG | - | tig0024468:15754-15773 | Msa1417300:exon | 60.0% |
TCTCCTACTCCTCCGGTCAC+CGG | - | tig0024468:15793-15812 | Msa1417300:CDS | 60.0% | |
TGGTTCAATGGGGAGGGGAG+GGG | - | tig0024468:16273-16292 | Msa1417300:intron | 60.0% | |
AGGGGAGGGGATTCAAGGGA+AGG | - | tig0024468:16286-16305 | Msa1417300:intron | 60.0% | |
GGGGAGGGGATTCAAGGGAA+GGG | - | tig0024468:16287-16306 | Msa1417300:intron | 60.0% | |
GAGGGGATTCAAGGGAAGGG+AGG | - | tig0024468:16290-16309 | Msa1417300:intron | 60.0% | |
GGGGATTCAAGGGAAGGGAG+GGG | - | tig0024468:16292-16311 | Msa1417300:intron | 60.0% | |
GGGATTCAAGGGAAGGGAGG+GGG | - | tig0024468:16293-16312 | Msa1417300:intron | 60.0% | |
!! | GAGAACCGCAAACCGGTTCG+CGG | + | tig0024468:17825-17844 | None:intergenic | 60.0% |
!! | CGAACCGGTTTGCGGTTCTC+TGG | - | tig0024468:17825-17844 | Msa1417300:intron | 60.0% |
CAAAAGGTGGGACCCCTTCC+CGG | - | tig0024468:18295-18314 | Msa1417300:intron | 60.0% | |
TATACGCAGGGTCCGGGAAG+GGG | + | tig0024468:18310-18329 | None:intergenic | 60.0% | |
GTATACGCAGGGTCCGGGAA+GGG | + | tig0024468:18311-18330 | None:intergenic | 60.0% | |
AGTATACGCAGGGTCCGGGA+AGG | + | tig0024468:18312-18331 | None:intergenic | 60.0% | |
TTCCCGGACCCTGCGTATAC+TGG | - | tig0024468:18311-18330 | Msa1417300:intron | 60.0% | |
CTCCAGTATACGCAGGGTCC+GGG | + | tig0024468:18316-18335 | None:intergenic | 60.0% | |
GCTCCAGTATACGCAGGGTC+CGG | + | tig0024468:18317-18336 | None:intergenic | 60.0% | |
TTAGAGAGGCTCGGAGGGAG+TGG | - | tig0024468:21520-21539 | Msa1417300:CDS | 60.0% | |
TAGAGAGGCTCGGAGGGAGT+GGG | - | tig0024468:21521-21540 | Msa1417300:CDS | 60.0% | |
CTCCGAGCTATCTGTGGTGG+TGG | - | tig0024468:22525-22544 | Msa1417300:intron | 60.0% | |
GCTGCCTCATTTGGCACCGT+AGG | - | tig0024468:22887-22906 | Msa1417300:intron | 60.0% | |
ATCGGTTACCACCGAGGCAG+TGG | - | tig0024468:22939-22958 | Msa1417300:intron | 60.0% | |
TAGAAACACATGCGGGGGGG+AGG | + | tig0024468:24550-24569 | None:intergenic | 60.0% | |
! | CCGCTTGGGAGAGTGCACAG+TGG | + | tig0024468:15732-15751 | None:intergenic | 65.0% |
TGAACTTCGCCGGTGACCGG+AGG | + | tig0024468:15805-15824 | None:intergenic | 65.0% | |
TGGGGAGGGGAGGGGATTCA+AGG | - | tig0024468:16281-16300 | Msa1417300:intron | 65.0% | |
GGGGAGGGGAGGGGATTCAA+GGG | - | tig0024468:16282-16301 | Msa1417300:intron | 65.0% | |
! | CGGGAAGGGGTCCCACCTTT+TGG | + | tig0024468:18297-18316 | None:intergenic | 65.0% |
GTCGCCGTGAGCACTACCAG+TGG | - | tig0024468:18998-19017 | Msa1417300:intron | 65.0% | |
TCGCAGCCGACCCCACTTAG+TGG | - | tig0024468:21287-21306 | Msa1417300:CDS | 65.0% | |
CGCAGCCGACCCCACTTAGT+GGG | - | tig0024468:21288-21307 | Msa1417300:intron | 65.0% | |
AGAGAGGCTCGGAGGGAGTG+GGG | - | tig0024468:21522-21541 | Msa1417300:CDS | 65.0% | |
CCGGCCGCCGCTGGTAGAAT+CGG | + | tig0024468:15761-15780 | None:intergenic | 70.0% | |
CCGATTCTACCAGCGGCGGC+CGG | - | tig0024468:15758-15777 | Msa1417300:exon | 70.0% | |
TCGCCGGTGACCGGAGGAGT+AGG | + | tig0024468:15799-15818 | None:intergenic | 70.0% | |
TCTACCAGCGGCGGCCGGTC+TGG | - | tig0024468:15763-15782 | Msa1417300:exon | 75.0% | |
GAGGCTCGGAGGGAGTGGGG+AGG | - | tig0024468:21525-21544 | Msa1417300:CDS | 75.0% | |
! | CGCACCAGACCGGCCGCCGC+TGG | + | tig0024468:15770-15789 | None:intergenic | 85.0% |
Chromosome | Type | Strat | End | Strand | Name |
---|---|---|---|---|---|
tig0024468 | gene | 15499 | 24731 | 15499 | ID=Msa1417300;Name=Msa1417300 |
tig0024468 | mRNA | 15499 | 24731 | 15499 | ID=Msa1417300-mRNA-1;Parent=Msa1417300;Name=Msa1417300-mRNA-1;_AED=0.19;_eAED=0.19;_QI=87|0.9|0.90|1|1|1|11|265|494 |
tig0024468 | exon | 15499 | 15902 | 15499 | ID=Msa1417300-mRNA-1:exon:23348;Parent=Msa1417300-mRNA-1 |
tig0024468 | exon | 16357 | 16520 | 16357 | ID=Msa1417300-mRNA-1:exon:23347;Parent=Msa1417300-mRNA-1 |
tig0024468 | exon | 17598 | 17726 | 17598 | ID=Msa1417300-mRNA-1:exon:23346;Parent=Msa1417300-mRNA-1 |
tig0024468 | exon | 18564 | 18706 | 18564 | ID=Msa1417300-mRNA-1:exon:23345;Parent=Msa1417300-mRNA-1 |
tig0024468 | exon | 19356 | 19473 | 19356 | ID=Msa1417300-mRNA-1:exon:23344;Parent=Msa1417300-mRNA-1 |
tig0024468 | exon | 19876 | 19929 | 19876 | ID=Msa1417300-mRNA-1:exon:23343;Parent=Msa1417300-mRNA-1 |
tig0024468 | exon | 20609 | 20701 | 20609 | ID=Msa1417300-mRNA-1:exon:23342;Parent=Msa1417300-mRNA-1 |
tig0024468 | exon | 21177 | 21306 | 21177 | ID=Msa1417300-mRNA-1:exon:23341;Parent=Msa1417300-mRNA-1 |
tig0024468 | exon | 21467 | 21555 | 21467 | ID=Msa1417300-mRNA-1:exon:23340;Parent=Msa1417300-mRNA-1 |
tig0024468 | exon | 23996 | 24091 | 23996 | ID=Msa1417300-mRNA-1:exon:23339;Parent=Msa1417300-mRNA-1 |
tig0024468 | exon | 24315 | 24731 | 24315 | ID=Msa1417300-mRNA-1:exon:23338;Parent=Msa1417300-mRNA-1 |
tig0024468 | five_prime_UTR | 24645 | 24731 | 24645 | ID=Msa1417300-mRNA-1:five_prime_utr;Parent=Msa1417300-mRNA-1 |
tig0024468 | CDS | 24315 | 24644 | 24315 | ID=Msa1417300-mRNA-1:cds;Parent=Msa1417300-mRNA-1 |
tig0024468 | CDS | 23996 | 24091 | 23996 | ID=Msa1417300-mRNA-1:cds;Parent=Msa1417300-mRNA-1 |
tig0024468 | CDS | 21467 | 21555 | 21467 | ID=Msa1417300-mRNA-1:cds;Parent=Msa1417300-mRNA-1 |
tig0024468 | CDS | 21177 | 21306 | 21177 | ID=Msa1417300-mRNA-1:cds;Parent=Msa1417300-mRNA-1 |
tig0024468 | CDS | 20609 | 20701 | 20609 | ID=Msa1417300-mRNA-1:cds;Parent=Msa1417300-mRNA-1 |
tig0024468 | CDS | 19876 | 19929 | 19876 | ID=Msa1417300-mRNA-1:cds;Parent=Msa1417300-mRNA-1 |
tig0024468 | CDS | 19356 | 19473 | 19356 | ID=Msa1417300-mRNA-1:cds;Parent=Msa1417300-mRNA-1 |
tig0024468 | CDS | 18564 | 18706 | 18564 | ID=Msa1417300-mRNA-1:cds;Parent=Msa1417300-mRNA-1 |
tig0024468 | CDS | 17598 | 17726 | 17598 | ID=Msa1417300-mRNA-1:cds;Parent=Msa1417300-mRNA-1 |
tig0024468 | CDS | 16357 | 16520 | 16357 | ID=Msa1417300-mRNA-1:cds;Parent=Msa1417300-mRNA-1 |
tig0024468 | CDS | 15764 | 15902 | 15764 | ID=Msa1417300-mRNA-1:cds;Parent=Msa1417300-mRNA-1 |
tig0024468 | three_prime_UTR | 15499 | 15763 | 15499 | ID=Msa1417300-mRNA-1:three_prime_utr;Parent=Msa1417300-mRNA-1 |
Gene Sequence |
Protein sequence |