AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa0429560


Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0429560 MtrunA17_Chr3g0133261 98.895 543 5 1 1 543 1 542 0.0 1111
Msa0429560 MtrunA17_Chr7g0270811 40.909 484 271 6 69 543 52 529 7.79e-136 404
Msa0429560 MtrunA17_Chr3g0143341 36.000 525 284 7 64 543 6 523 6.78e-115 350
Msa0429560 MtrunA17_Chr3g0143331 33.114 456 203 9 82 495 6 401 1.22e-77 250
Msa0429560 MtrunA17_Chr3g0096421 34.796 319 192 5 234 543 8 319 5.25e-57 193
Msa0429560 MtrunA17_Chr3g0096431 38.849 139 85 0 64 202 12 150 2.76e-33 124
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0429560 AT5G52520.1 80.882 544 96 3 3 543 5 543 0.0 901
Msa0429560 AT3G62120.3 40.909 484 270 8 69 543 41 517 2.96e-129 387
Msa0429560 AT3G62120.2 40.909 484 270 8 69 543 54 530 3.57e-129 387
Msa0429560 AT3G62120.1 40.909 484 270 8 69 543 54 530 3.57e-129 387
Msa0429560 AT5G10880.1 36.245 229 125 5 329 543 88 309 1.92e-30 121

Find 168 sgRNAs with CRISPR-Local

Find 443 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
CTTTCTAATAATATGATTTA+TGG 0.079203 3_2:-81012960 Msa0429560:three_prime_UTR
CTCTATGGAGCCTTCAATTT+TGG 0.135831 3_2:-81013834 Msa0429560:CDS
CTGGATGGAAATTCAATTTC+TGG 0.137157 3_2:-81014101 Msa0429560:CDS
ATCTGCTGTCATTGTGTAAA+AGG 0.173357 3_2:-81012818 Msa0429560:three_prime_UTR
CGCCATTTGGGAAGCCATTC+AGG 0.220881 3_2:-81018574 Msa0429560:intron
TCATCATCCTTCTTCCAAAT+TGG 0.238394 3_2:+81014219 None:intergenic
CGAGATACAGTCTTCTCTTT+TGG 0.245617 3_2:-81013786 Msa0429560:CDS
TTAGAACTCTTGAATTTCTT+TGG 0.246752 3_2:-81016975 Msa0429560:CDS
GGCCTCTGCTGCAGTGGTTT+TGG 0.247674 3_2:+81018755 None:intergenic
ACTTGCTTCTTTCTCTATAA+AGG 0.261830 3_2:+81017465 None:intergenic
CAAAGGCACGGGAAAAGTTT+TGG 0.265297 3_2:+81016639 None:intergenic
ACTTTCGTCCCTTTGCTCTA+AGG 0.265320 3_2:+81012720 None:intergenic
CGAGTTGTCGACTCGGTCTT+TGG 0.269239 3_2:+81018734 None:intergenic
CTTGCAGAGTTAGTAAGATT+TGG 0.279485 3_2:+81013002 None:intergenic
GTCCCTATGGTTACGCCATT+TGG 0.281205 3_2:-81018587 Msa0429560:CDS
ATGGACAAAGGGAATATATT+TGG 0.290677 3_2:-81015506 Msa0429560:CDS
ACTTAGGCAAAAGTTGTATA+AGG 0.293929 3_2:-81012875 Msa0429560:three_prime_UTR
ACCTGTATCGGTGCAATCTT+TGG 0.300338 3_2:+81015402 None:intergenic
GTTCCTCTTAGAATTGAAAT+TGG 0.310395 3_2:-81013935 Msa0429560:CDS
CGGCGGTGGCGGAGAATGAT+TGG 0.327896 3_2:+81018807 None:intergenic
TTTCTAATAATATGATTTAT+GGG 0.331996 3_2:-81012959 Msa0429560:three_prime_UTR
ATCCCTTGTGGCTGTTCAAA+TGG 0.354235 3_2:+81013075 None:intergenic
GGGCAATTGCATTTCGAGAT+AGG 0.356660 3_2:-81013760 Msa0429560:intron
AGGTGGTAATTGTACCAATT+TGG 0.362681 3_2:-81014233 Msa0429560:CDS
CAAGGGGCCCTTGGTCTGCT+AGG 0.366722 3_2:-81013272 Msa0429560:intron
AGCTGCCATACCTGTTATTA+CGG 0.369384 3_2:-81016771 Msa0429560:CDS
CTTGAATTTCTTTGGCAAGA+AGG 0.374606 3_2:-81016967 Msa0429560:CDS
AACACTTTCCCTTGCTTCCC+AGG 0.380427 3_2:+81013863 None:intergenic
GTGCAGTTCACAGATGAAAA+TGG 0.386375 3_2:-81015525 Msa0429560:intron
GGCGGTGGCGGAGAATGATT+GGG 0.387864 3_2:+81018808 None:intergenic
TCTTCCTCTCTTGATTAATC+AGG 0.388403 3_2:-81017138 Msa0429560:intron
TCCCTATGGTTACGCCATTT+GGG 0.391559 3_2:-81018586 Msa0429560:CDS
TCCAAAGATTGCACCGATAC+AGG 0.393092 3_2:-81015403 Msa0429560:intron
TTCACAATGGTTTCACTTGT+AGG 0.397403 3_2:+81017197 None:intergenic
GAAAGTGTTTGGAATCTCTA+TGG 0.397700 3_2:-81013849 Msa0429560:CDS
AGGAAACTGGAGCAACTATC+AGG 0.398901 3_2:-81013104 Msa0429560:CDS
CTGCAATATCACAAGGCAAA+TGG 0.399141 3_2:-81013296 Msa0429560:CDS
CAATCTTTGGAGGAAGCATT+AGG 0.399281 3_2:+81015415 None:intergenic
AGTTAGCAGTAGTGACAATT+GGG 0.403138 3_2:-81017420 Msa0429560:CDS
AGCTTGTTCAAAAGCAAATC+TGG 0.405332 3_2:+81016790 None:intergenic
ATTCAATTTCTGGGAAATGA+AGG 0.410990 3_2:-81014091 Msa0429560:intron
CTTTCGTCCCTTTGCTCTAA+GGG 0.412454 3_2:+81012721 None:intergenic
CGGACCGTAATCTGCTAATT+CGG 0.418329 3_2:+81018632 None:intergenic
GCAAATGGGCAAGGGGCCCT+TGG 0.418567 3_2:-81013281 Msa0429560:CDS
AATATATTTGGCAGACATCA+TGG 0.419041 3_2:-81015494 Msa0429560:CDS
GGGAAGCAAGGGAAAGTGTT+TGG 0.420165 3_2:-81013860 Msa0429560:CDS
TTAAAAGTGAAAGAGGAAAC+TGG 0.421097 3_2:-81013117 Msa0429560:CDS
CAGAAATTGAATTTCCATCC+AGG 0.425508 3_2:+81014102 None:intergenic
ATAACCATTGTACCGCGAAC+CGG 0.425988 3_2:+81018612 None:intergenic
TGGATGGAAATTCAATTTCT+GGG 0.428325 3_2:-81014100 Msa0429560:CDS
ACATACACCTCCAAAATTGA+AGG 0.437424 3_2:+81013824 None:intergenic
TGCAATATCACAAGGCAAAT+GGG 0.439132 3_2:-81013295 Msa0429560:CDS
AATTCAAGAGTTCTAACAAA+TGG 0.442257 3_2:+81016982 None:intergenic
GAGTTAGCAGTAGTGACAAT+TGG 0.442737 3_2:-81017421 Msa0429560:CDS
TGAAAGGTTGGTGACGGCGG+TGG 0.445524 3_2:+81018793 None:intergenic
TAATAATATGATTTATGGGT+GGG 0.449328 3_2:-81012955 Msa0429560:three_prime_UTR
AATGTCAAGTTCAAGGAGAC+TGG 0.459172 3_2:-81018451 Msa0429560:CDS
TCTAAAGTGGAAACATTTGC+TGG 0.460420 3_2:-81016740 Msa0429560:CDS
GTGGAAGTGTGGTGATATCC+AGG 0.467177 3_2:-81013895 Msa0429560:CDS
ATTAAAAGATGTTTGATGAC+AGG 0.474053 3_2:-81013054 Msa0429560:CDS
ACAATGGTTATTCGTCCCTA+TGG 0.476175 3_2:-81018600 Msa0429560:CDS
CTAGGAGTGATGACTCGGTC+AGG 0.476493 3_2:+81018699 None:intergenic
TCTTTCTCTATAAAGGAGTA+AGG 0.477392 3_2:+81017472 None:intergenic
AGATGAGTTAAAAGTGAAAG+AGG 0.477450 3_2:-81013124 Msa0429560:CDS
AATTGTACCAATTTGGAAGA+AGG 0.481601 3_2:-81014226 Msa0429560:CDS
CTTCCCAGGAATATCTCTCC+TGG 0.482230 3_2:+81013877 None:intergenic
CACAGATGAAAATGGACAAA+GGG 0.483190 3_2:-81015517 Msa0429560:CDS
AAAGAAGCTCTTCAAAGCTC+TGG 0.483538 3_2:-81014162 Msa0429560:CDS
GCTTGAACCCTTAGAGCAAA+GGG 0.484129 3_2:-81012728 Msa0429560:three_prime_UTR
CACTTCCACTAGACACGTCC+CGG 0.484364 3_2:+81013909 None:intergenic
TTATTTGAATGTCAAGTTCA+AGG 0.486269 3_2:-81018458 Msa0429560:CDS
GTCTTTGGCCTCTGCTGCAG+TGG 0.486813 3_2:+81018749 None:intergenic
AAGGTTGGTGACGGCGGTGG+CGG 0.488368 3_2:+81018796 None:intergenic
AACCTGAATGGCTTCCCAAA+TGG 0.497397 3_2:+81018572 None:intergenic
GCAGATTACGGTCCGGTTCG+CGG 0.498963 3_2:-81018624 Msa0429560:CDS
GCTGCCATACCTGTTATTAC+GGG 0.500792 3_2:-81016770 Msa0429560:CDS
TGAGAAATTGCTGTTGTTGA+GGG 0.506381 3_2:+81018837 None:intergenic
GGACCAATTTCAATTCTAAG+AGG 0.507990 3_2:+81013932 None:intergenic
CTACACGATTGAGGCAATGA+TGG 0.509021 3_2:-81016705 Msa0429560:CDS
GAGGAAGATCACGGTAGCTA+TGG 0.509612 3_2:+81017153 None:intergenic
GACTCAGATCAAAGAACCCC+TGG 0.510899 3_2:-81014120 Msa0429560:CDS
AAAGAAGCAAGTCATGTTGA+GGG 0.511967 3_2:-81017454 Msa0429560:CDS
CGCCAAAACCACTGCAGCAG+AGG 0.513327 3_2:-81018757 Msa0429560:CDS
AAAATAGCCACTTCTTCAGC+AGG 0.513654 3_2:+81013027 None:intergenic
CTTAGGCAAAAGTTGTATAA+GGG 0.514326 3_2:-81012874 Msa0429560:three_prime_UTR
AGAGATATTCCTGGGAAGCA+AGG 0.516068 3_2:-81013872 Msa0429560:CDS
AGAAGGTGGCGGTGAAAGGT+TGG 0.519073 3_2:+81018781 None:intergenic
GCGGAGAAGGTGGCGGTGAA+AGG 0.520115 3_2:+81018777 None:intergenic
GGTGTATGTTAAAGACAAGT+TGG 0.524044 3_2:-81013810 Msa0429560:CDS
TAGAATTGAAATTGGTCCCC+GGG 0.525862 3_2:-81013927 Msa0429560:CDS
TTCCCAAATGGCGTAACCAT+AGG 0.529134 3_2:+81018584 None:intergenic
AATGCCGAATTAGCAGATTA+CGG 0.529226 3_2:-81018636 Msa0429560:CDS
CTGACCGAGTCATCACTCCT+AGG 0.534702 3_2:-81018698 Msa0429560:CDS
GAGAAATTGCTGTTGTTGAG+GGG 0.535670 3_2:+81018838 None:intergenic
GCATTGAAGTCCTGTGACCT+AGG 0.538432 3_2:+81018681 None:intergenic
TATCACAAGGCAAATGGGCA+AGG 0.539052 3_2:-81013290 Msa0429560:CDS
TCGACCCGTAATAACAGGTA+TGG 0.539172 3_2:+81016766 None:intergenic
TCCAGAAGAGGCAGAAAATG+AGG 0.539198 3_2:-81016926 Msa0429560:intron
GTAATCTGCTAATTCGGCAT+TGG 0.539992 3_2:+81018638 None:intergenic
TGCTTGAACCCTTAGAGCAA+AGG 0.540304 3_2:-81012729 Msa0429560:three_prime_UTR
TCCCAAATGGCGTAACCATA+GGG 0.541410 3_2:+81018585 None:intergenic
TTGGAGAAGAGTGAAAGAGG+AGG 0.544001 3_2:+81018916 None:intergenic
AGAAATTGAATTTCCATCCA+GGG 0.544417 3_2:+81014103 None:intergenic
AGAAATTGCTGTTGTTGAGG+GGG 0.546767 3_2:+81018839 None:intergenic
TGTATCGGTGCAATCTTTGG+AGG 0.548894 3_2:+81015405 None:intergenic
TACGGGTCGAAAATCTAAAG+TGG 0.549532 3_2:-81016753 Msa0429560:CDS
GAAAGAAGCAAGTCATGTTG+AGG 0.549877 3_2:-81017455 Msa0429560:CDS
AGTGGGCAAATGTCACAAGA+TGG 0.552413 3_2:-81017020 Msa0429560:CDS
TTCCCGTGCCTTTGAAACAC+AGG 0.553524 3_2:-81016630 Msa0429560:intron
GACAAGAAAGCATTGCAAGC+AGG 0.555118 3_2:-81016680 Msa0429560:CDS
ATCACAAGGCAAATGGGCAA+GGG 0.555350 3_2:-81013289 Msa0429560:CDS
GCATCAGACCTGTGTTTCAA+AGG 0.556209 3_2:+81016622 None:intergenic
TGCTCATGCAACTCCAGAAG+AGG 0.559996 3_2:-81016938 Msa0429560:CDS
TTAATTTCTTGTTACCACTT+AGG 0.560972 3_2:-81012891 Msa0429560:three_prime_UTR
GCATCCAACCATACCTGTAT+CGG 0.561155 3_2:+81015390 None:intergenic
AGACCTGTGTTTCAAAGGCA+CGG 0.561432 3_2:+81016627 None:intergenic
GACCTGTGTTTCAAAGGCAC+GGG 0.565333 3_2:+81016628 None:intergenic
GAGATATTCCTGGGAAGCAA+GGG 0.565396 3_2:-81013871 Msa0429560:CDS
GGTCCCCGGGACGTGTCTAG+TGG 0.566931 3_2:-81013914 Msa0429560:CDS
CTAATAATATGATTTATGGG+TGG 0.568766 3_2:-81012956 Msa0429560:three_prime_UTR
GGAGGCATCATCATGGTACA+TGG 0.569062 3_2:-81015450 Msa0429560:CDS
GAAATTGAATTTCCATCCAG+GGG 0.569742 3_2:+81014104 None:intergenic
CAATGGTTTCACTTGTAGGT+CGG 0.569797 3_2:+81017201 None:intergenic
TTAGAATTGAAATTGGTCCC+CGG 0.570679 3_2:-81013928 Msa0429560:CDS
ACTTCCACTAGACACGTCCC+GGG 0.571135 3_2:+81013910 None:intergenic
ATATCCAGGAGAGATATTCC+TGG 0.571372 3_2:-81013881 Msa0429560:CDS
AGGAGATCCTGCTGAAGAAG+TGG 0.571589 3_2:-81013034 Msa0429560:CDS
CGGTGAAAGGTTGGTGACGG+CGG 0.571786 3_2:+81018790 None:intergenic
GTGGGCAAATGTCACAAGAT+GGG 0.573271 3_2:-81017019 Msa0429560:CDS
GCAGGAACCAGCCACAACCT+TGG 0.576341 3_2:-81016662 Msa0429560:CDS
GTGAGAAATTGCTGTTGTTG+AGG 0.578924 3_2:+81018836 None:intergenic
ATATATTTGGCAGACATCAT+GGG 0.579832 3_2:-81015493 Msa0429560:CDS
CGGTCCGGTTCGCGGTACAA+TGG 0.585347 3_2:-81018616 Msa0429560:CDS
TTTACCTGATTAATCAAGAG+AGG 0.586404 3_2:+81017134 None:intergenic
AGTCATCACTCCTAGGTCAC+AGG 0.587801 3_2:-81018691 Msa0429560:CDS
GAGGTAGAGAGAGTGAGATG+AGG 0.589946 3_2:+81018935 None:intergenic
ATTGTCACTACTGCTAACTC+TGG 0.591910 3_2:+81017424 None:intergenic
CAGATCAAAGAACCCCTGGA+TGG 0.591928 3_2:-81014116 Msa0429560:CDS
TATCCAGGAGAGATATTCCT+GGG 0.592768 3_2:-81013880 Msa0429560:CDS
TACACGATTGAGGCAATGAT+GGG 0.595098 3_2:-81016704 Msa0429560:CDS
CGAATTAGCAGATTACGGTC+CGG 0.596537 3_2:-81018631 Msa0429560:CDS
TCACAAGGCAAATGGGCAAG+GGG 0.599892 3_2:-81013288 Msa0429560:CDS
CTTAAATCTGCAATATCACA+AGG 0.602226 3_2:-81013303 Msa0429560:CDS
TCACAGATGAAAATGGACAA+AGG 0.608406 3_2:-81015518 Msa0429560:CDS
TTCCATTTGAACAGCCACAA+GGG 0.611470 3_2:-81013077 Msa0429560:CDS
TTTCCATTTGAACAGCCACA+AGG 0.612338 3_2:-81013078 Msa0429560:CDS
CTTGAGAGACACCATTTGTG+TGG 0.613060 3_2:+81018890 None:intergenic
TTGTAAGACCTACACGATTG+AGG 0.616283 3_2:-81016714 Msa0429560:CDS
ATGGTACATGGAGATGATGC+TGG 0.617498 3_2:-81015438 Msa0429560:CDS
GTGACCTAGGAGTGATGACT+CGG 0.622486 3_2:+81018694 None:intergenic
TGGCGGTGAAAGGTTGGTGA+CGG 0.625593 3_2:+81018787 None:intergenic
GGCGGAGAATGATTGGGGAA+CGG 0.627567 3_2:+81018814 None:intergenic
AACACAACCTAGCAGACCAA+GGG 0.628350 3_2:+81013265 None:intergenic
AGTAAACATGTGATTCACAA+TGG 0.630715 3_2:+81017184 None:intergenic
CATCATTGCCTCAATCGTGT+AGG 0.631552 3_2:+81016706 None:intergenic
TAGGAGTGATGACTCGGTCA+GGG 0.637146 3_2:+81018700 None:intergenic
TGAATCACATGTTTACTCAG+TGG 0.643424 3_2:-81017178 Msa0429560:CDS
GATTCTTCGAGTTGTCGACT+CGG 0.646760 3_2:+81018727 None:intergenic
AAACACAACCTAGCAGACCA+AGG 0.647106 3_2:+81013264 None:intergenic
TAATCAAGAGAGGAAGATCA+CGG 0.658472 3_2:+81017144 None:intergenic
GTTAGCAGTAGTGACAATTG+GGG 0.660405 3_2:-81017419 Msa0429560:CDS
GGACGTGTCTAGTGGAAGTG+TGG 0.684037 3_2:-81013906 Msa0429560:CDS
GCGGTGGCGGAGAATGATTG+GGG 0.684633 3_2:+81018809 None:intergenic
GGAACTTGAAGAGAAGCTCG+TGG 0.700042 3_2:-81017389 Msa0429560:intron
CTTCCACTAGACACGTCCCG+GGG 0.711499 3_2:+81013911 None:intergenic
TATTTGGCAGACATCATGGG+CGG 0.711856 3_2:-81015490 Msa0429560:CDS
TTAGCAGTAGTGACAATTGG+GGG 0.717559 3_2:-81017418 Msa0429560:CDS
GGTCACAGGACTTCAATGCG+TGG 0.719791 3_2:-81018677 Msa0429560:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! TAAATAAATAAATAAATAAA+TGG + chr3_2:81013177-81013196 None:intergenic 0.0%
!! AAAAATTAATAAAAAAAATT+AGG + chr3_2:81018001-81018020 None:intergenic 0.0%
!! TTTCTAATAATATGATTTAT+GGG - chr3_2:81018713-81018732 Msa0429560:CDS 10.0%
!! CAAAAAAATTAAAGTAAAAC+AGG + chr3_2:81013337-81013356 None:intergenic 15.0%
!!! GTGTTATTAAATCAATTATA+TGG - chr3_2:81013363-81013382 Msa0429560:intron 15.0%
!!! AAGCGAAATTTAAAATTTAA+AGG + chr3_2:81013950-81013969 None:intergenic 15.0%
!!! TTATCTTTTAGAATCATATA+TGG - chr3_2:81015125-81015144 Msa0429560:intron 15.0%
!!! GTATAATTTTATGACTAATT+TGG + chr3_2:81015510-81015529 None:intergenic 15.0%
!! TGTATATTAGTAGAAAAATA+TGG + chr3_2:81015596-81015615 None:intergenic 15.0%
!! TCATAAGTTTCAATTTAAAT+TGG + chr3_2:81015799-81015818 None:intergenic 15.0%
!! AAAAATTGAGTTATATGATA+TGG + chr3_2:81015900-81015919 None:intergenic 15.0%
!!! ATATTATCCATTTTCTTTTA+TGG - chr3_2:81016040-81016059 Msa0429560:intron 15.0%
!!! TATTATCCATTTTCTTTTAT+GGG - chr3_2:81016041-81016060 Msa0429560:intron 15.0%
!! AATAGAGATATAATATATGA+TGG - chr3_2:81016739-81016758 Msa0429560:CDS 15.0%
!! TTAATCTTTACCAAATTATA+AGG - chr3_2:81017203-81017222 Msa0429560:CDS 15.0%
!! CTTTCTAATAATATGATTTA+TGG - chr3_2:81018712-81018731 Msa0429560:CDS 15.0%
!!! TTATTTAGTTTTGTTTGTGT+AGG - chr3_2:81013190-81013209 Msa0429560:intron 20.0%
!!! ATTTTCTTGTGTTAAAGAAA+TGG + chr3_2:81013449-81013468 None:intergenic 20.0%
!! CAACATAATCTTAAGTAAAA+AGG + chr3_2:81013886-81013905 None:intergenic 20.0%
!!! GGTAATGAAATTTTATGTTA+TGG + chr3_2:81014134-81014153 None:intergenic 20.0%
!! AAGAAAAACAGTCATAAAAA+AGG + chr3_2:81014325-81014344 None:intergenic 20.0%
!!! TGTTTTTCTTCACATATTAT+CGG - chr3_2:81014335-81014354 Msa0429560:intron 20.0%
!!! TTTGATTTTTCCATTTTTTG+AGG - chr3_2:81014437-81014456 Msa0429560:intron 20.0%
!!! AATATGAGATTTTTTTTCAC+CGG - chr3_2:81015308-81015327 Msa0429560:intron 20.0%
!! AAATATGGTCAAAATAAGTT+AGG + chr3_2:81015581-81015600 None:intergenic 20.0%
!! AAATGAATAAAAACAGAAGT+GGG + chr3_2:81016013-81016032 None:intergenic 20.0%
!! TAAATGAATAAAAACAGAAG+TGG + chr3_2:81016014-81016033 None:intergenic 20.0%
!!! ATTATCCATTTTCTTTTATG+GGG - chr3_2:81016042-81016061 Msa0429560:intron 20.0%
!!! TAATATATGATGGAAAATTG+AGG - chr3_2:81016749-81016768 Msa0429560:CDS 20.0%
!! TGAGAATCTTATAAAATGAA+AGG + chr3_2:81017256-81017275 None:intergenic 20.0%
!! TTTATAAGATTCTCATTTGA+AGG - chr3_2:81017261-81017280 Msa0429560:intron 20.0%
!! TTATAAGATTCTCATTTGAA+GGG - chr3_2:81017262-81017281 Msa0429560:intron 20.0%
!! TATATTCAGATAGTCAAATA+TGG + chr3_2:81017685-81017704 None:intergenic 20.0%
!!! TATTTTTTTCTTCCAATTTC+AGG - chr3_2:81017712-81017731 Msa0429560:intron 20.0%
!!! ATTTTTTTCTTCCAATTTCA+GGG - chr3_2:81017713-81017732 Msa0429560:intron 20.0%
!! TAATAATATGATTTATGGGT+GGG - chr3_2:81018717-81018736 Msa0429560:CDS 20.0%
! AATGGCAAAATGAAAATTGA+AGG + chr3_2:81013159-81013178 None:intergenic 25.0%
! TTATTTGAATGTCAAGTTCA+AGG - chr3_2:81013214-81013233 Msa0429560:intron 25.0%
! ATAAGTTGTTTATCCAAACA+AGG + chr3_2:81013389-81013408 None:intergenic 25.0%
!!! ACTTATTTTGCAGCTTATAT+AGG - chr3_2:81013403-81013422 Msa0429560:intron 25.0%
!! TTTTAAATTTCGCTTGTACT+TGG - chr3_2:81013955-81013974 Msa0429560:intron 25.0%
! TTTAAATTTCGCTTGTACTT+GGG - chr3_2:81013956-81013975 Msa0429560:intron 25.0%
! TTTGTAGTGTAAGAATATGA+GGG - chr3_2:81014066-81014085 Msa0429560:intron 25.0%
!!! AAAGTGATATCTTGATAATG+TGG - chr3_2:81014095-81014114 Msa0429560:CDS 25.0%
!! GTTTTTCTTCACATATTATC+GGG - chr3_2:81014336-81014355 Msa0429560:intron 25.0%
! AAAATCAAAGACAAAACCTT+AGG + chr3_2:81014426-81014445 None:intergenic 25.0%
!! AATTCAAGAGTTCTAACAAA+TGG + chr3_2:81014693-81014712 None:intergenic 25.0%
! TTAGAACTCTTGAATTTCTT+TGG - chr3_2:81014697-81014716 Msa0429560:intron 25.0%
!!! TTTTTTTCTTCTGTGAGTTA+TGG - chr3_2:81015217-81015236 Msa0429560:intron 25.0%
! TTAAGCTCAAAATTATGCAT+TGG - chr3_2:81015717-81015736 Msa0429560:intron 25.0%
! AATGAATAAAAACAGAAGTG+GGG + chr3_2:81016012-81016031 None:intergenic 25.0%
!! ATTTCTCTTGTAGTTTTTCT+AGG + chr3_2:81016688-81016707 None:intergenic 25.0%
! TTTCATACATAACATCCAAT+AGG - chr3_2:81016861-81016880 Msa0429560:intron 25.0%
! TTACATGCAAAATGATTTCA+TGG + chr3_2:81017014-81017033 None:intergenic 25.0%
! AACTTCAGTTAGAGTATATT+CGG - chr3_2:81017124-81017143 Msa0429560:intron 25.0%
! TCATAGCATTCCTTATAATT+TGG + chr3_2:81017216-81017235 None:intergenic 25.0%
! TATATTTGGATGTAGAAGTT+TGG + chr3_2:81017328-81017347 None:intergenic 25.0%
! AAACTTCTACATCCAAATAT+AGG - chr3_2:81017327-81017346 Msa0429560:intron 25.0%
! CATGTAAACTATCCTATATT+TGG + chr3_2:81017342-81017361 None:intergenic 25.0%
!! ACTTGGATAGATTTCATTTT+TGG - chr3_2:81017615-81017634 Msa0429560:intron 25.0%
!!! CTTGGATAGATTTCATTTTT+GGG - chr3_2:81017616-81017635 Msa0429560:intron 25.0%
!!! CAAGTAAAAAGTATCACAAA+AGG + chr3_2:81017944-81017963 None:intergenic 25.0%
!! TTTTACTTGTGATAGACATT+TGG - chr3_2:81017955-81017974 Msa0429560:intron 25.0%
! AAGACTAGAATATATCATTC+AGG + chr3_2:81018039-81018058 None:intergenic 25.0%
!!! CTTCTGAAAAGTATTTAACT+AGG + chr3_2:81018073-81018092 None:intergenic 25.0%
!! CTAGTTAAATACTTTTCAGA+AGG - chr3_2:81018071-81018090 Msa0429560:intron 25.0%
! ATTTAGTGTATTACATAGAG+TGG + chr3_2:81018128-81018147 None:intergenic 25.0%
! AATTCCAATCTCTATTAGAA+AGG - chr3_2:81018190-81018209 Msa0429560:intron 25.0%
! ATTTCCTTTCTAATAGAGAT+TGG + chr3_2:81018197-81018216 None:intergenic 25.0%
! CTATTAGAAAGGAAATCAAT+TGG - chr3_2:81018201-81018220 Msa0429560:intron 25.0%
!! ATTAAAAGATGTTTGATGAC+AGG - chr3_2:81018618-81018637 Msa0429560:CDS 25.0%
! CTAATAATATGATTTATGGG+TGG - chr3_2:81018716-81018735 Msa0429560:CDS 25.0%
! TTAATTTCTTGTTACCACTT+AGG - chr3_2:81018781-81018800 Msa0429560:CDS 25.0%
AGAAAAAGAATGAACCTGAA+TGG + chr3_2:81013115-81013134 None:intergenic 30.0%
! TAGTAACATGTATTTTCCAC+AGG - chr3_2:81013247-81013266 Msa0429560:intron 30.0%
TGGTAATTAATGTTTACCTG+TGG + chr3_2:81013266-81013285 None:intergenic 30.0%
! TATCTGCAATTTGTTTGCAT+AGG - chr3_2:81013306-81013325 Msa0429560:CDS 30.0%
!! ATCAATTATATGGCCTTGTT+TGG - chr3_2:81013373-81013392 Msa0429560:intron 30.0%
TAAGCTATCCTAGTGAATTT+AGG - chr3_2:81013495-81013514 Msa0429560:intron 30.0%
AAGCTATCCTAGTGAATTTA+GGG - chr3_2:81013496-81013515 Msa0429560:intron 30.0%
CTTATTTCCCTAAATTCACT+AGG + chr3_2:81013506-81013525 None:intergenic 30.0%
AATATCTGATCTGACACTAT+GGG + chr3_2:81013642-81013661 None:intergenic 30.0%
AACGTCGAAAAAATTAAGCT+AGG + chr3_2:81013665-81013684 None:intergenic 30.0%
ACAATAAAAAAAGGGTAACC+CGG + chr3_2:81013798-81013817 None:intergenic 30.0%
CTACAAACAGTACAAGATAT+AGG + chr3_2:81014053-81014072 None:intergenic 30.0%
GTTTGTAGTGTAAGAATATG+AGG - chr3_2:81014065-81014084 Msa0429560:intron 30.0%
TCTTTCTCTATAAAGGAGTA+AGG + chr3_2:81014203-81014222 None:intergenic 30.0%
ACTTGCTTCTTTCTCTATAA+AGG + chr3_2:81014210-81014229 None:intergenic 30.0%
AGTAAACATGTGATTCACAA+TGG + chr3_2:81014491-81014510 None:intergenic 30.0%
TTTACCTGATTAATCAAGAG+AGG + chr3_2:81014541-81014560 None:intergenic 30.0%
TTCATTCAACAGGAAAAAAC+AGG + chr3_2:81014624-81014643 None:intergenic 30.0%
!!! GTTTTTTCCTGTTGAATGAA+CGG - chr3_2:81014624-81014643 Msa0429560:intron 30.0%
!!! TTTTTTCCTGTTGAATGAAC+GGG - chr3_2:81014625-81014644 Msa0429560:intron 30.0%
ACAAAATACTTCATTCCTGT+GGG - chr3_2:81015084-81015103 Msa0429560:intron 30.0%
TAGTAACAAATAAGAAGTCG+TGG + chr3_2:81015249-81015268 None:intergenic 30.0%
!! TTACTGAAACTTTGAGTTGA+CGG + chr3_2:81015290-81015309 None:intergenic 30.0%
!!! GCTGTTTTTCTGTAAATAAG+AGG - chr3_2:81015356-81015375 Msa0429560:intron 30.0%
! GTTTTTCTGTAAATAAGAGG+AGG - chr3_2:81015359-81015378 Msa0429560:intron 30.0%
ACAACAATCCTTCCTAAAAT+AGG - chr3_2:81015437-81015456 Msa0429560:CDS 30.0%
!! TTGGATTTCCTATTTTAGGA+AGG + chr3_2:81015448-81015467 None:intergenic 30.0%
! CTAGTTGGATTTCCTATTTT+AGG + chr3_2:81015452-81015471 None:intergenic 30.0%
! GTTTTTGTACAAGTGATAGT+AGG + chr3_2:81015476-81015495 None:intergenic 30.0%
TTCAAATGAGTCATCTATTG+CGG + chr3_2:81015543-81015562 None:intergenic 30.0%
TCAACTGTGTCATGTATTAA+GGG - chr3_2:81015754-81015773 Msa0429560:intron 30.0%
GCTTGGATTTATCATAAGTA+GGG + chr3_2:81015864-81015883 None:intergenic 30.0%
ATGATATGGCACAATCAATA+TGG + chr3_2:81015886-81015905 None:intergenic 30.0%
TTGATTAAATCCTTTCAACG+AGG - chr3_2:81016099-81016118 Msa0429560:intron 30.0%
ATGGACAAAGGGAATATATT+TGG - chr3_2:81016166-81016185 Msa0429560:intron 30.0%
AATATATTTGGCAGACATCA+TGG - chr3_2:81016178-81016197 Msa0429560:intron 30.0%
ATATATTTGGCAGACATCAT+GGG - chr3_2:81016179-81016198 Msa0429560:intron 30.0%
CATGTGTAGATATCTTTGTT+AGG - chr3_2:81016320-81016339 Msa0429560:intron 30.0%
TTACATTACTTGTCTGATCA+AGG + chr3_2:81016382-81016401 None:intergenic 30.0%
!! AGATTTGCTACACAAGAATA+TGG - chr3_2:81016401-81016420 Msa0429560:intron 30.0%
!! GATTTGCTACACAAGAATAT+GGG - chr3_2:81016402-81016421 Msa0429560:intron 30.0%
GACCTATAGTTTATGTAGTA+AGG - chr3_2:81016618-81016637 Msa0429560:intron 30.0%
CTCCTTACTACATAAACTAT+AGG + chr3_2:81016623-81016642 None:intergenic 30.0%
! TGAGATCAGATTTTGAATTG+AGG + chr3_2:81016892-81016911 None:intergenic 30.0%
TCATGGAAGAAAATGAATTG+AGG + chr3_2:81016997-81017016 None:intergenic 30.0%
TTCTTAGTGTAATATCTCAC+TGG - chr3_2:81017077-81017096 Msa0429560:intron 30.0%
AATTGTACCAATTTGGAAGA+AGG - chr3_2:81017446-81017465 Msa0429560:CDS 30.0%
GAAGAAGGATGATGAAAAAA+TGG - chr3_2:81017461-81017480 Msa0429560:CDS 30.0%
AGAAATTGAATTTCCATCCA+GGG + chr3_2:81017572-81017591 None:intergenic 30.0%
TGGATGGAAATTCAATTTCT+GGG - chr3_2:81017572-81017591 Msa0429560:intron 30.0%
! ATTCAATTTCTGGGAAATGA+AGG - chr3_2:81017581-81017600 Msa0429560:intron 30.0%
CAGAATCAATGTGTACAATT+TGG + chr3_2:81017643-81017662 None:intergenic 30.0%
GTTCCTCTTAGAATTGAAAT+TGG - chr3_2:81017737-81017756 Msa0429560:intron 30.0%
CTTAAATCTGCAATATCACA+AGG - chr3_2:81018369-81018388 Msa0429560:intron 30.0%
GTCATTAGAGTTGTTAATCA+TGG + chr3_2:81018503-81018522 None:intergenic 30.0%
AGATGAGTTAAAAGTGAAAG+AGG - chr3_2:81018548-81018567 Msa0429560:intron 30.0%
TTAAAAGTGAAAGAGGAAAC+TGG - chr3_2:81018555-81018574 Msa0429560:intron 30.0%
! AAACATCTTTTAATCCCTTG+TGG + chr3_2:81018612-81018631 None:intergenic 30.0%
! TTATACAACTTTTGCCTAAG+TGG + chr3_2:81018798-81018817 None:intergenic 30.0%
ACTTAGGCAAAAGTTGTATA+AGG - chr3_2:81018797-81018816 Msa0429560:CDS 30.0%
CTTAGGCAAAAGTTGTATAA+GGG - chr3_2:81018798-81018817 Msa0429560:CDS 30.0%
!! TTTTTGGAGAAGAGTGAAAG+AGG + chr3_2:81012762-81012781 None:intergenic 35.0%
TTCTCCAAAAACCACACAAA+TGG - chr3_2:81012771-81012790 Msa0429560:three_prime_UTR 35.0%
! TGAGAAATTGCTGTTGTTGA+GGG + chr3_2:81012838-81012857 None:intergenic 35.0%
AATGCCGAATTAGCAGATTA+CGG - chr3_2:81013036-81013055 Msa0429560:CDS 35.0%
GAATATCTGATCTGACACTA+TGG + chr3_2:81013643-81013662 None:intergenic 35.0%
TTAAGGCTGCTTGTAAAAAC+AGG - chr3_2:81013700-81013719 Msa0429560:intron 35.0%
TAAGGCTGCTTGTAAAAACA+GGG - chr3_2:81013701-81013720 Msa0429560:intron 35.0%
!! GAAGGCATCAAACAAATGAT+GGG + chr3_2:81014155-81014174 None:intergenic 35.0%
!! AGAAGGCATCAAACAAATGA+TGG + chr3_2:81014156-81014175 None:intergenic 35.0%
AAAGAAGCAAGTCATGTTGA+GGG - chr3_2:81014218-81014237 Msa0429560:CDS 35.0%
AGTTAGCAGTAGTGACAATT+GGG - chr3_2:81014252-81014271 Msa0429560:intron 35.0%
!!! TTTTCCATTTTTTGAGGCTG+TGG - chr3_2:81014443-81014462 Msa0429560:intron 35.0%
TTCACAATGGTTTCACTTGT+AGG + chr3_2:81014478-81014497 None:intergenic 35.0%
TGAATCACATGTTTACTCAG+TGG - chr3_2:81014494-81014513 Msa0429560:intron 35.0%
TAATCAAGAGAGGAAGATCA+CGG + chr3_2:81014531-81014550 None:intergenic 35.0%
TCTTCCTCTCTTGATTAATC+AGG - chr3_2:81014534-81014553 Msa0429560:intron 35.0%
! TTTTGCTTACAAACGAAACC+AGG + chr3_2:81014570-81014589 None:intergenic 35.0%
CTTGAATTTCTTTGGCAAGA+AGG - chr3_2:81014705-81014724 Msa0429560:intron 35.0%
ATCTTGACGAAGAGAATATG+CGG + chr3_2:81014773-81014792 None:intergenic 35.0%
! AGCTTGTTCAAAAGCAAATC+TGG + chr3_2:81014885-81014904 None:intergenic 35.0%
! TCTAAAGTGGAAACATTTGC+TGG - chr3_2:81014932-81014951 Msa0429560:intron 35.0%
CACAAAATACTTCATTCCTG+TGG - chr3_2:81015083-81015102 Msa0429560:intron 35.0%
GAAGAAAAAAAAACTCCCAC+AGG + chr3_2:81015102-81015121 None:intergenic 35.0%
!! AGCTTGCTACTTAAAGTTCA+AGG + chr3_2:81015153-81015172 None:intergenic 35.0%
! CTTGATTTTGCCAGCTATTT+CGG - chr3_2:81015171-81015190 Msa0429560:intron 35.0%
TTTAAAGAGACCGAAATAGC+TGG + chr3_2:81015184-81015203 None:intergenic 35.0%
TTGCAGCTAATGTAGCATTA+AGG - chr3_2:81015331-81015350 Msa0429560:intron 35.0%
TTCTGTAAATAAGAGGAGGT+AGG - chr3_2:81015363-81015382 Msa0429560:intron 35.0%
AAATAAGAGGAGGTAGGATT+AGG - chr3_2:81015369-81015388 Msa0429560:intron 35.0%
TCAAATGAGTCATCTATTGC+GGG + chr3_2:81015542-81015561 None:intergenic 35.0%
! TATGCATTGGTATGCGTAAT+AGG - chr3_2:81015730-81015749 Msa0429560:intron 35.0%
! ATGCATTGGTATGCGTAATA+GGG - chr3_2:81015731-81015750 Msa0429560:intron 35.0%
GTCAACTGTGTCATGTATTA+AGG - chr3_2:81015753-81015772 Msa0429560:intron 35.0%
GGCTTGGATTTATCATAAGT+AGG + chr3_2:81015865-81015884 None:intergenic 35.0%
! GACTATAGCAAACCTTTTAG+TGG - chr3_2:81015963-81015982 Msa0429560:intron 35.0%
GAAGACCCCATAAAAGAAAA+TGG + chr3_2:81016050-81016069 None:intergenic 35.0%
TCACAGATGAAAATGGACAA+AGG - chr3_2:81016154-81016173 Msa0429560:intron 35.0%
CACAGATGAAAATGGACAAA+GGG - chr3_2:81016155-81016174 Msa0429560:intron 35.0%
GGTTAAATGTAGCACTTTAG+AGG - chr3_2:81016341-81016360 Msa0429560:intron 35.0%
!!! CGCTTATTTTATGCTCGAAT+TGG + chr3_2:81016451-81016470 None:intergenic 35.0%
ACAACATTAGAGAGAGACTT+GGG - chr3_2:81016533-81016552 Msa0429560:intron 35.0%
AGTAAGGAGAGTAGATAAGA+CGG - chr3_2:81016634-81016653 Msa0429560:CDS 35.0%
TCAGTTAGAGTATATTCGGA+TGG - chr3_2:81017128-81017147 Msa0429560:intron 35.0%
AGGTGGTAATTGTACCAATT+TGG - chr3_2:81017439-81017458 Msa0429560:CDS 35.0%
TCATCATCCTTCTTCCAAAT+TGG + chr3_2:81017456-81017475 None:intergenic 35.0%
GAAATTGAATTTCCATCCAG+GGG + chr3_2:81017571-81017590 None:intergenic 35.0%
CAGAAATTGAATTTCCATCC+AGG + chr3_2:81017573-81017592 None:intergenic 35.0%
CTGGATGGAAATTCAATTTC+TGG - chr3_2:81017571-81017590 Msa0429560:intron 35.0%
! ATTTCTGGGAAATGAAGGTT+CGG - chr3_2:81017586-81017605 Msa0429560:intron 35.0%
TGAAGGTTCGGATTTAAACT+TGG - chr3_2:81017598-81017617 Msa0429560:intron 35.0%
! ATTGATTCTGTTTATGCTGC+TGG - chr3_2:81017653-81017672 Msa0429560:intron 35.0%
GGACCAATTTCAATTCTAAG+AGG + chr3_2:81017743-81017762 None:intergenic 35.0%
TTAGAATTGAAATTGGTCCC+CGG - chr3_2:81017744-81017763 Msa0429560:intron 35.0%
!! GAAAGTGTTTGGAATCTCTA+TGG - chr3_2:81017823-81017842 Msa0429560:intron 35.0%
ACATACACCTCCAAAATTGA+AGG + chr3_2:81017851-81017870 None:intergenic 35.0%
GGTGTATGTTAAAGACAAGT+TGG - chr3_2:81017862-81017881 Msa0429560:intron 35.0%
AGACATTTGGATCTAACTGT+TGG - chr3_2:81017968-81017987 Msa0429560:intron 35.0%
! TGTATTACATAGAGTGGACT+TGG + chr3_2:81018122-81018141 None:intergenic 35.0%
! AAAGCATTAGAGACAGTTCT+CGG + chr3_2:81018155-81018174 None:intergenic 35.0%
AACTGTCTCTAATGCTTTAG+TGG - chr3_2:81018157-81018176 Msa0429560:intron 35.0%
TGCAATATCACAAGGCAAAT+GGG - chr3_2:81018377-81018396 Msa0429560:intron 35.0%
GTTGTTAATCATGGTCTTTC+TGG + chr3_2:81018494-81018513 None:intergenic 35.0%
CTTGCAGAGTTAGTAAGATT+TGG + chr3_2:81018673-81018692 None:intergenic 35.0%
ATCTGCTGTCATTGTGTAAA+AGG - chr3_2:81018854-81018873 Msa0429560:CDS 35.0%
! GACACCATTTGTGTGGTTTT+TGG + chr3_2:81012778-81012797 None:intergenic 40.0%
! AGAAATTGCTGTTGTTGAGG+GGG + chr3_2:81012836-81012855 None:intergenic 40.0%
! GAGAAATTGCTGTTGTTGAG+GGG + chr3_2:81012837-81012856 None:intergenic 40.0%
! GTGAGAAATTGCTGTTGTTG+AGG + chr3_2:81012839-81012858 None:intergenic 40.0%
GTAATCTGCTAATTCGGCAT+TGG + chr3_2:81013037-81013056 None:intergenic 40.0%
ACAATGGTTATTCGTCCCTA+TGG - chr3_2:81013072-81013091 Msa0429560:CDS 40.0%
AATGTCAAGTTCAAGGAGAC+TGG - chr3_2:81013221-81013240 Msa0429560:intron 40.0%
! CTGCAATTTGTTTGCATAGG+AGG - chr3_2:81013309-81013328 Msa0429560:CDS 40.0%
CTGCTTGTAAAAACAGGGTA+AGG - chr3_2:81013706-81013725 Msa0429560:intron 40.0%
CGTACAATACACCAAATGGT+GGG - chr3_2:81013732-81013751 Msa0429560:intron 40.0%
ACAGTACAAGATATAGGCAC+AGG + chr3_2:81014047-81014066 None:intergenic 40.0%
TGCAGAACAGATTTGAGAGA+AGG + chr3_2:81014173-81014192 None:intergenic 40.0%
GAAAGAAGCAAGTCATGTTG+AGG - chr3_2:81014217-81014236 Msa0429560:CDS 40.0%
ATTGTCACTACTGCTAACTC+TGG + chr3_2:81014251-81014270 None:intergenic 40.0%
GAGTTAGCAGTAGTGACAAT+TGG - chr3_2:81014251-81014270 Msa0429560:intron 40.0%
GTTAGCAGTAGTGACAATTG+GGG - chr3_2:81014253-81014272 Msa0429560:intron 40.0%
TTAGCAGTAGTGACAATTGG+GGG - chr3_2:81014254-81014273 Msa0429560:intron 40.0%
CAATGGTTTCACTTGTAGGT+CGG + chr3_2:81014474-81014493 None:intergenic 40.0%
TAATCAGGTAAACGATGTCC+TGG - chr3_2:81014549-81014568 Msa0429560:intron 40.0%
AGCTGCCATACCTGTTATTA+CGG - chr3_2:81014901-81014920 Msa0429560:intron 40.0%
! GATTTTCGACCCGTAATAAC+AGG + chr3_2:81014914-81014933 None:intergenic 40.0%
TACGGGTCGAAAATCTAAAG+TGG - chr3_2:81014919-81014938 Msa0429560:intron 40.0%
TTGTAAGACCTACACGATTG+AGG - chr3_2:81014958-81014977 Msa0429560:intron 40.0%
TACACGATTGAGGCAATGAT+GGG - chr3_2:81014968-81014987 Msa0429560:intron 40.0%
!! AAAAGTTTTGGCCAAGGTTG+TGG + chr3_2:81015024-81015043 None:intergenic 40.0%
AATGCTACATTAGCTGCAAC+CGG + chr3_2:81015330-81015349 None:intergenic 40.0%
CAGCTAATGTAGCATTAAGG+AGG - chr3_2:81015334-81015353 Msa0429560:intron 40.0%
GAAGGATTGTTGTGTAAGTG+TGG + chr3_2:81015430-81015449 None:intergenic 40.0%
! CAAGTGATAGTAGGACTAGT+TGG + chr3_2:81015467-81015486 None:intergenic 40.0%
CTGTGTCATGTATTAAGGGA+CGG - chr3_2:81015758-81015777 Msa0429560:intron 40.0%
ATGGCACAATCAATATGGCT+TGG + chr3_2:81015881-81015900 None:intergenic 40.0%
CACTCATGGTTTCTATAGCT+TGG + chr3_2:81015933-81015952 None:intergenic 40.0%
AGTCTTTCAGTAAGCACTCA+TGG + chr3_2:81015947-81015966 None:intergenic 40.0%
GTGCAGTTCACAGATGAAAA+TGG - chr3_2:81016147-81016166 Msa0429560:intron 40.0%
!! GTTAGTACTCGTTTTGTTGG+AGG - chr3_2:81016204-81016223 Msa0429560:intron 40.0%
!!! TTTTGTTGGAGGCATCATCA+TGG - chr3_2:81016215-81016234 Msa0429560:intron 40.0%
!! CAATCTTTGGAGGAAGCATT+AGG + chr3_2:81016260-81016279 None:intergenic 40.0%
AAGAATATGGGACAGAGTGT+TGG - chr3_2:81016414-81016433 Msa0429560:intron 40.0%
! AGAATATGGGACAGAGTGTT+GGG - chr3_2:81016415-81016434 Msa0429560:intron 40.0%
CGAGCATAAAATAAGCGTAG+AGG - chr3_2:81016454-81016473 Msa0429560:intron 40.0%
AAATAAGCGTAGAGGAGATG+AGG - chr3_2:81016462-81016481 Msa0429560:intron 40.0%
TGTGGTAAGACTAGCAAGAT+AGG - chr3_2:81016500-81016519 Msa0429560:intron 40.0%
GACAACATTAGAGAGAGACT+TGG - chr3_2:81016532-81016551 Msa0429560:intron 40.0%
CAACATTAGAGAGAGACTTG+GGG - chr3_2:81016534-81016553 Msa0429560:intron 40.0%
! TTCACCGTCTTTTCTACAAG+AGG + chr3_2:81016565-81016584 None:intergenic 40.0%
TAGAAAAGACGGTGAAAACC+CGG - chr3_2:81016569-81016588 Msa0429560:intron 40.0%
GAGGATAGTCAAATCACTAG+AGG - chr3_2:81016656-81016675 Msa0429560:CDS 40.0%
TTATACCACTAAGTGGTGGT+CGG + chr3_2:81016794-81016813 None:intergenic 40.0%
TGAATTGAGGTGAGTCCTAT+TGG + chr3_2:81016879-81016898 None:intergenic 40.0%
! ACAGTGAAAGCTGTCTCTTT+TGG - chr3_2:81016942-81016961 Msa0429560:CDS 40.0%
CACTGGATGTATTCATGCAT+CGG - chr3_2:81017094-81017113 Msa0429560:intron 40.0%
GTTAGAGTATATTCGGATGG+AGG - chr3_2:81017131-81017150 Msa0429560:intron 40.0%
TTGGATGTAGAAGTTTGGAG+TGG + chr3_2:81017323-81017342 None:intergenic 40.0%
CAGCATGAGCTTGTCAAAAA+TGG + chr3_2:81017404-81017423 None:intergenic 40.0%
GTACAATTACCACCTAAACC+AGG + chr3_2:81017434-81017453 None:intergenic 40.0%
AAAGAAGCTCTTCAAAGCTC+TGG - chr3_2:81017510-81017529 Msa0429560:intron 40.0%
TAAGAGGAACTCCCTGAAAT+TGG + chr3_2:81017727-81017746 None:intergenic 40.0%
TAGAATTGAAATTGGTCCCC+GGG - chr3_2:81017745-81017764 Msa0429560:intron 40.0%
ATATCCAGGAGAGATATTCC+TGG - chr3_2:81017791-81017810 Msa0429560:intron 40.0%
TATCCAGGAGAGATATTCCT+GGG - chr3_2:81017792-81017811 Msa0429560:intron 40.0%
! CTCTATGGAGCCTTCAATTT+TGG - chr3_2:81017838-81017857 Msa0429560:intron 40.0%
! TATGGAGCCTTCAATTTTGG+AGG - chr3_2:81017841-81017860 Msa0429560:intron 40.0%
! CGAGATACAGTCTTCTCTTT+TGG - chr3_2:81017886-81017905 Msa0429560:intron 40.0%
!! TACAGTCTTCTCTTTTGGAG+AGG - chr3_2:81017891-81017910 Msa0429560:intron 40.0%
!! ACAGTCTTCTCTTTTGGAGA+GGG - chr3_2:81017892-81017911 Msa0429560:intron 40.0%
!! TTGGATCTAACTGTTGGTTC+TGG - chr3_2:81017974-81017993 Msa0429560:intron 40.0%
! TACATAGAGTGGACTTGGTT+TGG + chr3_2:81018117-81018136 None:intergenic 40.0%
CAATTGGAATGAGTTCCTTG+TGG - chr3_2:81018217-81018236 Msa0429560:intron 40.0%
TGTCAATTTGCCTGTTTGCT+GGG + chr3_2:81018287-81018306 None:intergenic 40.0%
ATGTCAATTTGCCTGTTTGC+TGG + chr3_2:81018288-81018307 None:intergenic 40.0%
CTGCAATATCACAAGGCAAA+TGG - chr3_2:81018376-81018395 Msa0429560:intron 40.0%
TTTCCATTTGAACAGCCACA+AGG - chr3_2:81018594-81018613 Msa0429560:CDS 40.0%
TTCCATTTGAACAGCCACAA+GGG - chr3_2:81018595-81018614 Msa0429560:CDS 40.0%
AAAATAGCCACTTCTTCAGC+AGG + chr3_2:81018648-81018667 None:intergenic 40.0%
TTGGAGAAGAGTGAAAGAGG+AGG + chr3_2:81012759-81012778 None:intergenic 45.0%
CTTGAGAGACACCATTTGTG+TGG + chr3_2:81012785-81012804 None:intergenic 45.0%
!! GATTCTTCGAGTTGTCGACT+CGG + chr3_2:81012948-81012967 None:intergenic 45.0%
CGGACCGTAATCTGCTAATT+CGG + chr3_2:81013043-81013062 None:intergenic 45.0%
CGAATTAGCAGATTACGGTC+CGG - chr3_2:81013041-81013060 Msa0429560:CDS 45.0%
ATAACCATTGTACCGCGAAC+CGG + chr3_2:81013063-81013082 None:intergenic 45.0%
TCCCTATGGTTACGCCATTT+GGG - chr3_2:81013086-81013105 Msa0429560:CDS 45.0%
TCCCAAATGGCGTAACCATA+GGG + chr3_2:81013090-81013109 None:intergenic 45.0%
TTCCCAAATGGCGTAACCAT+AGG + chr3_2:81013091-81013110 None:intergenic 45.0%
AACCTGAATGGCTTCCCAAA+TGG + chr3_2:81013103-81013122 None:intergenic 45.0%
AAGCACTTGCGACACTGTTT+GGG + chr3_2:81013580-81013599 None:intergenic 45.0%
TAAGCACTTGCGACACTGTT+TGG + chr3_2:81013581-81013600 None:intergenic 45.0%
GCTGCGTACAATACACCAAA+TGG - chr3_2:81013728-81013747 Msa0429560:intron 45.0%
GCGTACAATACACCAAATGG+TGG - chr3_2:81013731-81013750 Msa0429560:intron 45.0%
CGTTGAAAAGCTGTGACCTA+AGG - chr3_2:81014407-81014426 Msa0429560:intron 45.0%
! TTGAATGAACGGGCTTCAGT+GGG - chr3_2:81014635-81014654 Msa0429560:intron 45.0%
AGTGGGCAAATGTCACAAGA+TGG - chr3_2:81014652-81014671 Msa0429560:intron 45.0%
GTGGGCAAATGTCACAAGAT+GGG - chr3_2:81014653-81014672 Msa0429560:intron 45.0%
TCCAGAAGAGGCAGAAAATG+AGG - chr3_2:81014746-81014765 Msa0429560:intron 45.0%
! ACCTCATTTTCTGCCTCTTC+TGG + chr3_2:81014750-81014769 None:intergenic 45.0%
CAAGTATTCTGCTCTGTTGC+AGG - chr3_2:81014835-81014854 Msa0429560:intron 45.0%
GCTGCCATACCTGTTATTAC+GGG - chr3_2:81014902-81014921 Msa0429560:intron 45.0%
TCGACCCGTAATAACAGGTA+TGG + chr3_2:81014909-81014928 None:intergenic 45.0%
CATCATTGCCTCAATCGTGT+AGG + chr3_2:81014969-81014988 None:intergenic 45.0%
CTACACGATTGAGGCAATGA+TGG - chr3_2:81014967-81014986 Msa0429560:intron 45.0%
!! GACAAGAAAGCATTGCAAGC+AGG - chr3_2:81014992-81015011 Msa0429560:intron 45.0%
!! CAAAGGCACGGGAAAAGTTT+TGG + chr3_2:81015036-81015055 None:intergenic 45.0%
AGACCTGTGTTTCAAAGGCA+CGG + chr3_2:81015048-81015067 None:intergenic 45.0%
GCATCAGACCTGTGTTTCAA+AGG + chr3_2:81015053-81015072 None:intergenic 45.0%
ATGAGTCATCTATTGCGGGA+CGG + chr3_2:81015538-81015557 None:intergenic 45.0%
TGTCATGTATTAAGGGACGG+AGG - chr3_2:81015761-81015780 Msa0429560:intron 45.0%
GTCATGTATTAAGGGACGGA+GGG - chr3_2:81015762-81015781 Msa0429560:intron 45.0%
GAAGTGGGGAAAACAGAATC+TGG + chr3_2:81015998-81016017 None:intergenic 45.0%
TATTTGGCAGACATCATGGG+CGG - chr3_2:81016182-81016201 Msa0429560:intron 45.0%
! GCGGTTAGTACTCGTTTTGT+TGG - chr3_2:81016201-81016220 Msa0429560:intron 45.0%
ATGGTACATGGAGATGATGC+TGG - chr3_2:81016234-81016253 Msa0429560:intron 45.0%
! TGTATCGGTGCAATCTTTGG+AGG + chr3_2:81016270-81016289 None:intergenic 45.0%
! TCCAAAGATTGCACCGATAC+AGG - chr3_2:81016269-81016288 Msa0429560:intron 45.0%
! ACCTGTATCGGTGCAATCTT+TGG + chr3_2:81016273-81016292 None:intergenic 45.0%
! AGATTGCACCGATACAGGTA+TGG - chr3_2:81016274-81016293 Msa0429560:intron 45.0%
GCATCCAACCATACCTGTAT+CGG + chr3_2:81016285-81016304 None:intergenic 45.0%
CAGGTATGGTTGGATGCTAT+TGG - chr3_2:81016288-81016307 Msa0429560:intron 45.0%
AGGATGTTGCGTTGTATGTG+TGG - chr3_2:81016482-81016501 Msa0429560:intron 45.0%
AGCGCCTCTTGTAGAAAAGA+CGG - chr3_2:81016558-81016577 Msa0429560:intron 45.0%
AAGGAGAGTAGATAAGACGG+AGG - chr3_2:81016637-81016656 Msa0429560:CDS 45.0%
GACCACCACTTAGTGGTATA+AGG - chr3_2:81016793-81016812 Msa0429560:CDS 45.0%
! AGCCTTATACCACTAAGTGG+TGG + chr3_2:81016798-81016817 None:intergenic 45.0%
! CCAAGCCTTATACCACTAAG+TGG + chr3_2:81016801-81016820 None:intergenic 45.0%
CCACTTAGTGGTATAAGGCT+TGG - chr3_2:81016798-81016817 Msa0429560:CDS 45.0%
GGAGGAGATTGAGAAGATGA+AGG - chr3_2:81017149-81017168 Msa0429560:CDS 45.0%
AGAGATATTCCTGGGAAGCA+AGG - chr3_2:81017800-81017819 Msa0429560:intron 45.0%
GAGATATTCCTGGGAAGCAA+GGG - chr3_2:81017801-81017820 Msa0429560:intron 45.0%
GGGCAATTGCATTTCGAGAT+AGG - chr3_2:81017912-81017931 Msa0429560:intron 45.0%
TGCACAACATGATGACCACA+AGG + chr3_2:81018235-81018254 None:intergenic 45.0%
! GTCAATTTGCCTGTTTGCTG+GGG + chr3_2:81018286-81018305 None:intergenic 45.0%
TATCACAAGGCAAATGGGCA+AGG - chr3_2:81018382-81018401 Msa0429560:intron 45.0%
ATCACAAGGCAAATGGGCAA+GGG - chr3_2:81018383-81018402 Msa0429560:intron 45.0%
AACACAACCTAGCAGACCAA+GGG + chr3_2:81018410-81018429 None:intergenic 45.0%
AAACACAACCTAGCAGACCA+AGG + chr3_2:81018411-81018430 None:intergenic 45.0%
AGGAAACTGGAGCAACTATC+AGG - chr3_2:81018568-81018587 Msa0429560:intron 45.0%
ATCCCTTGTGGCTGTTCAAA+TGG + chr3_2:81018600-81018619 None:intergenic 45.0%
TGCTTGAACCCTTAGAGCAA+AGG - chr3_2:81018943-81018962 Msa0429560:five_prime_UTR 45.0%
GCTTGAACCCTTAGAGCAAA+GGG - chr3_2:81018944-81018963 Msa0429560:five_prime_UTR 45.0%
CTTTCGTCCCTTTGCTCTAA+GGG + chr3_2:81018954-81018973 None:intergenic 45.0%
ACTTTCGTCCCTTTGCTCTA+AGG + chr3_2:81018955-81018974 None:intergenic 45.0%
!! TATATATAATTAATTAAGTT+TGG + chr3_2:81013286-81013305 None:intergenic 5.0%
!! TTTATTGTTATATAAATTTA+AGG - chr3_2:81013683-81013702 Msa0429560:intron 5.0%
!! TTTATATAACAATAAAAAAA+GGG + chr3_2:81013806-81013825 None:intergenic 5.0%
!! ATTTATATAACAATAAAAAA+AGG + chr3_2:81013807-81013826 None:intergenic 5.0%
!! ACATATTTATATAAAAATAA+AGG + chr3_2:81018444-81018463 None:intergenic 5.0%
!!! TTTTATATAAATATGTTATA+CGG - chr3_2:81018448-81018467 Msa0429560:CDS 5.0%
GAGGTAGAGAGAGTGAGATG+AGG + chr3_2:81012740-81012759 None:intergenic 50.0%
! AATTGCTGTTGTTGAGGGGG+AGG + chr3_2:81012833-81012852 None:intergenic 50.0%
!! TAGGAGTGATGACTCGGTCA+GGG + chr3_2:81012975-81012994 None:intergenic 50.0%
GTGACCTAGGAGTGATGACT+CGG + chr3_2:81012981-81013000 None:intergenic 50.0%
AGTCATCACTCCTAGGTCAC+AGG - chr3_2:81012981-81013000 Msa0429560:three_prime_UTR 50.0%
GCATTGAAGTCCTGTGACCT+AGG + chr3_2:81012994-81013013 None:intergenic 50.0%
GTCCCTATGGTTACGCCATT+TGG - chr3_2:81013085-81013104 Msa0429560:CDS 50.0%
!! TCTGACACTATGGGCTGGTT+TGG + chr3_2:81013633-81013652 None:intergenic 50.0%
TCTGATCTGACACTATGGGC+TGG + chr3_2:81013638-81013657 None:intergenic 50.0%
CTAAAGCTCCCTCATACGCA+GGG + chr3_2:81013771-81013790 None:intergenic 50.0%
ACTAAAGCTCCCTCATACGC+AGG + chr3_2:81013772-81013791 None:intergenic 50.0%
! ATGAGGGAGCTTTAGTGCAC+CGG - chr3_2:81013776-81013795 Msa0429560:CDS 50.0%
!! CGCTTGTACTTGGGTTAGTG+CGG - chr3_2:81013965-81013984 Msa0429560:intron 50.0%
AGTGACAATTGGGGGTGGAA+AGG - chr3_2:81014262-81014281 Msa0429560:intron 50.0%
GGAACTTGAAGAGAAGCTCG+TGG - chr3_2:81014283-81014302 Msa0429560:intron 50.0%
CCTGCCACAGCCTCAAAAAA+TGG + chr3_2:81014450-81014469 None:intergenic 50.0%
!!! CCATTTTTTGAGGCTGTGGC+AGG - chr3_2:81014447-81014466 Msa0429560:intron 50.0%
GAGGAAGATCACGGTAGCTA+TGG + chr3_2:81014522-81014541 None:intergenic 50.0%
CTGAAGCCCGTTCATTCAAC+AGG + chr3_2:81014634-81014653 None:intergenic 50.0%
! GTTGAATGAACGGGCTTCAG+TGG - chr3_2:81014634-81014653 Msa0429560:intron 50.0%
TGCTCATGCAACTCCAGAAG+AGG - chr3_2:81014734-81014753 Msa0429560:intron 50.0%
!! CACGGGAAAAGTTTTGGCCA+AGG + chr3_2:81015030-81015049 None:intergenic 50.0%
!! TTCCCGTGCCTTTGAAACAC+AGG - chr3_2:81015042-81015061 Msa0429560:intron 50.0%
! GACCTGTGTTTCAAAGGCAC+GGG + chr3_2:81015047-81015066 None:intergenic 50.0%
TGGATGCTGCAGCCACTAAA+AGG + chr3_2:81015978-81015997 None:intergenic 50.0%
!! GGAGGCATCATCATGGTACA+TGG - chr3_2:81016222-81016241 Msa0429560:intron 50.0%
! TGCACCGATACAGGTATGGT+TGG - chr3_2:81016278-81016297 Msa0429560:intron 50.0%
!! ATATGGGACAGAGTGTTGGG+CGG - chr3_2:81016418-81016437 Msa0429560:intron 50.0%
AAAACCCGGCTTAGGTGGTT+TGG - chr3_2:81016583-81016602 Msa0429560:intron 50.0%
AAACCCGGCTTAGGTGGTTT+GGG - chr3_2:81016584-81016603 Msa0429560:intron 50.0%
TGCTGTGCATTGCCTGGTTT+AGG - chr3_2:81017419-81017438 Msa0429560:CDS 50.0%
TGTGCATTGCCTGGTTTAGG+TGG - chr3_2:81017422-81017441 Msa0429560:CDS 50.0%
GACTCAGATCAAAGAACCCC+TGG - chr3_2:81017552-81017571 Msa0429560:intron 50.0%
CAGATCAAAGAACCCCTGGA+TGG - chr3_2:81017556-81017575 Msa0429560:intron 50.0%
! GTGGAAGTGTGGTGATATCC+AGG - chr3_2:81017777-81017796 Msa0429560:intron 50.0%
CTTCCCAGGAATATCTCTCC+TGG + chr3_2:81017798-81017817 None:intergenic 50.0%
AACACTTTCCCTTGCTTCCC+AGG + chr3_2:81017812-81017831 None:intergenic 50.0%
!! GGGAAGCAAGGGAAAGTGTT+TGG - chr3_2:81017812-81017831 Msa0429560:intron 50.0%
GGCATGAACATGTGTGCGAT+GGG + chr3_2:81018261-81018280 None:intergenic 50.0%
TGGCATGAACATGTGTGCGA+TGG + chr3_2:81018262-81018281 None:intergenic 50.0%
! ATTTGCCTGTTTGCTGGGGA+TGG + chr3_2:81018282-81018301 None:intergenic 50.0%
TCACAAGGCAAATGGGCAAG+GGG - chr3_2:81018384-81018403 Msa0429560:intron 50.0%
AGGAGATCCTGCTGAAGAAG+TGG - chr3_2:81018638-81018657 Msa0429560:CDS 50.0%
TTGTTGAGGGGGAGGAGAAG+AGG + chr3_2:81012825-81012844 None:intergenic 55.0%
GGCGGAGAATGATTGGGGAA+CGG + chr3_2:81012861-81012880 None:intergenic 55.0%
!! TGGCGGTGAAAGGTTGGTGA+CGG + chr3_2:81012888-81012907 None:intergenic 55.0%
! AGAAGGTGGCGGTGAAAGGT+TGG + chr3_2:81012894-81012913 None:intergenic 55.0%
!!! AGTGGTTTTGGCGGAGAAGG+TGG + chr3_2:81012908-81012927 None:intergenic 55.0%
!!! TGCAGTGGTTTTGGCGGAGA+AGG + chr3_2:81012911-81012930 None:intergenic 55.0%
!!! CTCTGCTGCAGTGGTTTTGG+CGG + chr3_2:81012917-81012936 None:intergenic 55.0%
!! CGAGTTGTCGACTCGGTCTT+TGG + chr3_2:81012941-81012960 None:intergenic 55.0%
!! CTAGGAGTGATGACTCGGTC+AGG + chr3_2:81012976-81012995 None:intergenic 55.0%
CTGACCGAGTCATCACTCCT+AGG - chr3_2:81012974-81012993 Msa0429560:three_prime_UTR 55.0%
GGTCACAGGACTTCAATGCG+TGG - chr3_2:81012995-81013014 Msa0429560:exon 55.0%
CGCCATTTGGGAAGCCATTC+AGG - chr3_2:81013098-81013117 Msa0429560:CDS 55.0%
! TGAGGGAGCTTTAGTGCACC+GGG - chr3_2:81013777-81013796 Msa0429560:CDS 55.0%
GCAGTAGTGACAATTGGGGG+TGG - chr3_2:81014257-81014276 Msa0429560:intron 55.0%
!! GTTTTGGCCAAGGTTGTGGC+TGG + chr3_2:81015020-81015039 None:intergenic 55.0%
GTCATCTATTGCGGGACGGA+GGG + chr3_2:81015534-81015553 None:intergenic 55.0%
AGTCATCTATTGCGGGACGG+AGG + chr3_2:81015535-81015554 None:intergenic 55.0%
GCAGCTGCATCCTCGTTGAA+AGG + chr3_2:81016112-81016131 None:intergenic 55.0%
AGACGGTGAAAACCCGGCTT+AGG - chr3_2:81016575-81016594 Msa0429560:intron 55.0%
ATGCCCAAACCACCTAAGCC+GGG + chr3_2:81016590-81016609 None:intergenic 55.0%
CATGCCCAAACCACCTAAGC+CGG + chr3_2:81016591-81016610 None:intergenic 55.0%
! GGTGGTTTGGGCATGTAGAG+AGG - chr3_2:81016596-81016615 Msa0429560:intron 55.0%
CTAAGTGGTGGTCGGCTACA+TGG + chr3_2:81016786-81016805 None:intergenic 55.0%
TGTAGCCGACCACCACTTAG+TGG - chr3_2:81016786-81016805 Msa0429560:CDS 55.0%
AGCTCATGCTGTGCATTGCC+TGG - chr3_2:81017413-81017432 Msa0429560:CDS 55.0%
ACTTCCACTAGACACGTCCC+GGG + chr3_2:81017765-81017784 None:intergenic 55.0%
CACTTCCACTAGACACGTCC+CGG + chr3_2:81017766-81017785 None:intergenic 55.0%
GGACGTGTCTAGTGGAAGTG+TGG - chr3_2:81017766-81017785 Msa0429560:intron 55.0%
TCATGCCATCCCCAGCAAAC+AGG - chr3_2:81018274-81018293 Msa0429560:intron 55.0%
!! GCGGTGGCGGAGAATGATTG+GGG + chr3_2:81012866-81012885 None:intergenic 60.0%
!! GGCGGTGGCGGAGAATGATT+GGG + chr3_2:81012867-81012886 None:intergenic 60.0%
!! TGAAAGGTTGGTGACGGCGG+TGG + chr3_2:81012882-81012901 None:intergenic 60.0%
!! CGGTGAAAGGTTGGTGACGG+CGG + chr3_2:81012885-81012904 None:intergenic 60.0%
!! GGTTTTGGCGGAGAAGGTGG+CGG + chr3_2:81012905-81012924 None:intergenic 60.0%
CGCCAAAACCACTGCAGCAG+AGG - chr3_2:81012915-81012934 Msa0429560:three_prime_UTR 60.0%
! GGCCTCTGCTGCAGTGGTTT+TGG + chr3_2:81012920-81012939 None:intergenic 60.0%
GTCTTTGGCCTCTGCTGCAG+TGG + chr3_2:81012926-81012945 None:intergenic 60.0%
! GCAGATTACGGTCCGGTTCG+CGG - chr3_2:81013048-81013067 Msa0429560:CDS 60.0%
! CAAATGGTGGGACCCCTTCC+CGG - chr3_2:81013744-81013763 Msa0429560:intron 60.0%
TCATACGCAGGGTCCGGGAA+GGG + chr3_2:81013760-81013779 None:intergenic 60.0%
TTCCCGGACCCTGCGTATGA+GGG - chr3_2:81013760-81013779 Msa0429560:intron 60.0%
GCAGGAACCAGCCACAACCT+TGG - chr3_2:81015010-81015029 Msa0429560:intron 60.0%
CGGTGAAAACCCGGCTTAGG+TGG - chr3_2:81016578-81016597 Msa0429560:intron 60.0%
CTTCCACTAGACACGTCCCG+GGG + chr3_2:81017764-81017783 None:intergenic 60.0%
!! CGGCGGTGGCGGAGAATGAT+TGG + chr3_2:81012868-81012887 None:intergenic 65.0%
!! AAGGTTGGTGACGGCGGTGG+CGG + chr3_2:81012879-81012898 None:intergenic 65.0%
! GCGGAGAAGGTGGCGGTGAA+AGG + chr3_2:81012898-81012917 None:intergenic 65.0%
! CGGTCCGGTTCGCGGTACAA+TGG - chr3_2:81013056-81013075 Msa0429560:CDS 65.0%
CGGGAAGGGGTCCCACCATT+TGG + chr3_2:81013746-81013765 None:intergenic 65.0%
CATACGCAGGGTCCGGGAAG+GGG + chr3_2:81013759-81013778 None:intergenic 65.0%
CTCATACGCAGGGTCCGGGA+AGG + chr3_2:81013761-81013780 None:intergenic 65.0%
CTTCCCGGACCCTGCGTATG+AGG - chr3_2:81013759-81013778 Msa0429560:intron 65.0%
CTCCCTCATACGCAGGGTCC+GGG + chr3_2:81013765-81013784 None:intergenic 65.0%
GCTCCCTCATACGCAGGGTC+CGG + chr3_2:81013766-81013785 None:intergenic 65.0%
GCAAATGGGCAAGGGGCCCT+TGG - chr3_2:81018391-81018410 Msa0429560:intron 65.0%
CAAGGGGCCCTTGGTCTGCT+AGG - chr3_2:81018400-81018419 Msa0429560:intron 65.0%
GGTCCCCGGGACGTGTCTAG+TGG - chr3_2:81017758-81017777 Msa0429560:intron 70.0%
Chromosome Type Strat End Strand Name
chr3_2 gene 81012719 81018975 81012719 ID=Msa0429560;Name=Msa0429560
chr3_2 mRNA 81012719 81018975 81012719 ID=Msa0429560-mRNA-1;Parent=Msa0429560;Name=Msa0429560-mRNA-1;_AED=0.09;_eAED=0.09;_QI=71|1|1|1|1|1|11|292|543
chr3_2 exon 81012719 81013152 81012719 ID=Msa0429560-mRNA-1:exon:22322;Parent=Msa0429560-mRNA-1
chr3_2 exon 81013273 81013356 81013273 ID=Msa0429560-mRNA-1:exon:22321;Parent=Msa0429560-mRNA-1
chr3_2 exon 81013761 81013960 81013761 ID=Msa0429560-mRNA-1:exon:22320;Parent=Msa0429560-mRNA-1
chr3_2 exon 81014092 81014253 81014092 ID=Msa0429560-mRNA-1:exon:22319;Parent=Msa0429560-mRNA-1
chr3_2 exon 81015404 81015541 81015404 ID=Msa0429560-mRNA-1:exon:22318;Parent=Msa0429560-mRNA-1
chr3_2 exon 81016631 81016837 81016631 ID=Msa0429560-mRNA-1:exon:22317;Parent=Msa0429560-mRNA-1
chr3_2 exon 81016927 81017040 81016927 ID=Msa0429560-mRNA-1:exon:22316;Parent=Msa0429560-mRNA-1
chr3_2 exon 81017139 81017225 81017139 ID=Msa0429560-mRNA-1:exon:22315;Parent=Msa0429560-mRNA-1
chr3_2 exon 81017390 81017500 81017390 ID=Msa0429560-mRNA-1:exon:22314;Parent=Msa0429560-mRNA-1
chr3_2 exon 81018426 81018482 81018426 ID=Msa0429560-mRNA-1:exon:22313;Parent=Msa0429560-mRNA-1
chr3_2 exon 81018575 81018975 81018575 ID=Msa0429560-mRNA-1:exon:22312;Parent=Msa0429560-mRNA-1
chr3_2 five_prime_UTR 81018905 81018975 81018905 ID=Msa0429560-mRNA-1:five_prime_utr;Parent=Msa0429560-mRNA-1
chr3_2 CDS 81018575 81018904 81018575 ID=Msa0429560-mRNA-1:cds;Parent=Msa0429560-mRNA-1
chr3_2 CDS 81018426 81018482 81018426 ID=Msa0429560-mRNA-1:cds;Parent=Msa0429560-mRNA-1
chr3_2 CDS 81017390 81017500 81017390 ID=Msa0429560-mRNA-1:cds;Parent=Msa0429560-mRNA-1
chr3_2 CDS 81017139 81017225 81017139 ID=Msa0429560-mRNA-1:cds;Parent=Msa0429560-mRNA-1
chr3_2 CDS 81016927 81017040 81016927 ID=Msa0429560-mRNA-1:cds;Parent=Msa0429560-mRNA-1
chr3_2 CDS 81016631 81016837 81016631 ID=Msa0429560-mRNA-1:cds;Parent=Msa0429560-mRNA-1
chr3_2 CDS 81015404 81015541 81015404 ID=Msa0429560-mRNA-1:cds;Parent=Msa0429560-mRNA-1
chr3_2 CDS 81014092 81014253 81014092 ID=Msa0429560-mRNA-1:cds;Parent=Msa0429560-mRNA-1
chr3_2 CDS 81013761 81013960 81013761 ID=Msa0429560-mRNA-1:cds;Parent=Msa0429560-mRNA-1
chr3_2 CDS 81013273 81013356 81013273 ID=Msa0429560-mRNA-1:cds;Parent=Msa0429560-mRNA-1
chr3_2 CDS 81013011 81013152 81013011 ID=Msa0429560-mRNA-1:cds;Parent=Msa0429560-mRNA-1
chr3_2 three_prime_UTR 81012719 81013010 81012719 ID=Msa0429560-mRNA-1:three_prime_utr;Parent=Msa0429560-mRNA-1
Gene Sequence

>Msa0429560

ATGGTGTCTCTCAAGCTATCTTCTTTCACTCACCTCTTCTCCTCCCCCTCAACAACAGCAATTTCTCACCGTTCCCCAATCATTCTCCGCCACCGCCGTCACCAACCTTTCACCGCCACCTTCTCCGCCAAAACCACTGCAGCAGAGGCCAAAGACCGAGTCGACAACTCGAAGAATCGCGTCCCTGACCGAGTCATCACTCCTAGGTCACAGGACTTCAATGCGTGGTATCTCGATATCATAGCCAATGCCGAATTAGCAGATTACGGTCCGGTTCGCGGTACAATGGTTATTCGTCCCTATGGTTACGCCATTTGGGAAGCCATTCAGGATTATTTGAATGTCAAGTTCAAGGAGACTGGACATAGTAACATGTATTTTCCACAGTTTATTCCTTACTCCTTTATAGAGAAAGAAGCAAGTCATGTTGAGGGTTTCAGTCCAGAGTTAGCAGTAGTGACAATTGGGGGTGGAAAGGAACTTGAAGAGAAGCTCGTGGTCCGACCTACAAGTGAAACCATTGTGAATCACATGTTTACTCAGTGGATCCATAGCTACCGTGATCTTCCTCTCTTGATTAATCAGTGGGCAAATGTCACAAGATGGGAGATGCGCACTAAACCATTTGTTAGAACTCTTGAATTTCTTTGGCAAGAAGGTCATACTGCTCATGCAACTCCAGAAGAGGCAGAAAATGAGGCTAAACAAATGATTGACATCTATACCAGATTTGCTTTTGAACAAGCTGCCATACCTGTTATTACGGGTCGAAAATCTAAAGTGGAAACATTTGCTGGTGCTTGTAAGACCTACACGATTGAGGCAATGATGGGTGACAAGAAAGCATTGCAAGCAGGAACCAGCCACAACCTTGGCCAAAACTTTTCCCGTGCCTTTGAAACACAGTTCACAGATGAAAATGGACAAAGGGAATATATTTGGCAGACATCATGGGCGGTTAGTACTCGTTTTGTTGGAGGCATCATCATGGTACATGGAGATGATGCTGGCCTAATGCTTCCTCCAAAGATTGCACCGATACAGGTGGTAATTGTACCAATTTGGAAGAAGGATGATGAAAAAATGGAAGTTCTTAGTGCAGCATTGTCTGTAAAAGAAGCTCTTCAAAGCTCTGGCGTTAAAGTAAAACTTGATGACTCAGATCAAAGAACCCCTGGATGGAAATTCAATTTCTGGGAAATGAAGGGAGTTCCTCTTAGAATTGAAATTGGTCCCCGGGACGTGTCTAGTGGAAGTGTGGTGATATCCAGGAGAGATATTCCTGGGAAGCAAGGGAAAGTGTTTGGAATCTCTATGGAGCCTTCAATTTTGGAGGTGTATGTTAAAGACAAGTTGGACGAGATACAGTCTTCTCTTTTGGAGAGGGCAATTGCATTTCGAGATAGTAATATTGTAGATGTGAGCACATACGAAGATCTTAAATCTGCAATATCACAAGGCAAATGGGCAAGGGGCCCTTGGTCTGCTAGCGATGAAGATGAGTTAAAAGTGAAAGAGGAAACTGGAGCAACTATCAGGTGTTTTCCATTTGAACAGCCACAAGGGATTAAAAGATGTTTGATGACAGGAGATCCTGCTGAAGAAGTGGCTATTTTTGCCAAATCTTACTAA

Protein sequence

>Msa0429560

MVSLKLSSFTHLFSSPSTTAISHRSPIILRHRRHQPFTATFSAKTTAAEAKDRVDNSKNRVPDRVITPRSQDFNAWYLDIIANAELADYGPVRGTMVIRPYGYAIWEAIQDYLNVKFKETGHSNMYFPQFIPYSFIEKEASHVEGFSPELAVVTIGGGKELEEKLVVRPTSETIVNHMFTQWIHSYRDLPLLINQWANVTRWEMRTKPFVRTLEFLWQEGHTAHATPEEAENEAKQMIDIYTRFAFEQAAIPVITGRKSKVETFAGACKTYTIEAMMGDKKALQAGTSHNLGQNFSRAFETQFTDENGQREYIWQTSWAVSTRFVGGIIMVHGDDAGLMLPPKIAPIQVVIVPIWKKDDEKMEVLSAALSVKEALQSSGVKVKLDDSDQRTPGWKFNFWEMKGVPLRIEIGPRDVSSGSVVISRRDIPGKQGKVFGISMEPSILEVYVKDKLDEIQSSLLERAIAFRDSNIVDVSTYEDLKSAISQGKWARGPWSASDEDELKVKEETGATIRCFPFEQPQGIKRCLMTGDPAEEVAIFAKSY*