AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa0141770


Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0141770 MtrunA17_Chr3g0133261 96.370 551 11 2 1 551 1 542 0.0 1092
Msa0141770 MtrunA17_Chr7g0270811 39.837 492 273 7 69 551 52 529 1.86e-130 391
Msa0141770 MtrunA17_Chr3g0143341 35.272 533 285 8 64 551 6 523 3.35e-110 338
Msa0141770 MtrunA17_Chr3g0143331 32.328 464 204 10 82 503 6 401 1.08e-72 238
Msa0141770 MtrunA17_Chr3g0096421 33.333 327 194 6 234 551 8 319 2.48e-52 181
Msa0141770 MtrunA17_Chr3g0096431 38.849 139 85 0 64 202 12 150 3.14e-33 124
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0141770 AT5G52520.1 78.804 552 101 4 3 551 5 543 0.0 884
Msa0141770 AT3G62120.3 39.837 492 272 9 69 551 41 517 5.36e-124 374
Msa0141770 AT3G62120.2 39.837 492 272 9 69 551 54 530 1.15e-123 374
Msa0141770 AT3G62120.1 39.837 492 272 9 69 551 54 530 1.15e-123 374
Msa0141770 AT5G10880.1 36.245 229 125 5 337 551 88 309 2.47e-30 121

Find 171 sgRNAs with CRISPR-Local

Find 441 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
CTTTCTAATAATATGATTTA+TGG 0.079203 1_4:-504017 Msa0141770:three_prime_UTR
CTCTATGGAGCCTTCAATTT+TGG 0.135831 1_4:-504890 Msa0141770:CDS
CTGGATGGAAATTCAATTTC+TGG 0.137157 1_4:-505157 Msa0141770:CDS
ATCTGCTGTCATTGTGTAAA+AGG 0.173357 1_4:-503875 Msa0141770:three_prime_UTR
CGCCATTTGGGAAGCCATTC+AGG 0.220881 1_4:-509634 Msa0141770:intron
TCATCATCCTTCTTCCAAAT+TGG 0.238394 1_4:+505275 None:intergenic
CGAGATACAGTCTTCTCTTT+TGG 0.245617 1_4:-504842 Msa0141770:CDS
TTAGAACTCTTGAATTTCTT+TGG 0.246752 1_4:-508030 Msa0141770:CDS
GGCCTCTGCTGCAGTGGTTT+TGG 0.247674 1_4:+509815 None:intergenic
ACTTGCTTCTTTCTCTATAA+AGG 0.261830 1_4:+508521 None:intergenic
ACTTTCGTCCCTTTGCTCTA+AGG 0.265320 1_4:+503777 None:intergenic
CGAGTTGTCGACTCGGTCTT+TGG 0.269239 1_4:+509794 None:intergenic
CTTGCAGAGTTAGTAAGATT+TGG 0.279485 1_4:+504059 None:intergenic
GTCCCTATGGTTACGCCATT+TGG 0.281205 1_4:-509647 Msa0141770:CDS
ATGGACAAAGGGAATATATT+TGG 0.290677 1_4:-506561 Msa0141770:CDS
ACTTAGGCAAAAGTTGTATA+AGG 0.293929 1_4:-503932 Msa0141770:three_prime_UTR
ACCTGTATCGGTGCAATCTT+TGG 0.300338 1_4:+506457 None:intergenic
GTTCCTCTTAGAATTGAAAT+TGG 0.310395 1_4:-504991 Msa0141770:CDS
CGGCGGTGGCGGAGAATGAT+TGG 0.327896 1_4:+509867 None:intergenic
TTTCTAATAATATGATTTAT+GGG 0.331996 1_4:-504016 Msa0141770:three_prime_UTR
ATCCCTTGTGGCTGTTCAAA+TGG 0.354235 1_4:+504132 None:intergenic
GGGCAATTGCATTTCGAGAT+AGG 0.356660 1_4:-504816 Msa0141770:intron
TCAAAGGCACGGGAAAAGTT+TGG 0.359443 1_4:+507694 None:intergenic
AGGTGGTAATTGTACCAATT+TGG 0.362681 1_4:-505289 Msa0141770:CDS
CAAGGGGCCCTTGGTCTGCT+AGG 0.366722 1_4:-504329 Msa0141770:intron
AGCTGCCATACCTGTTATTA+CGG 0.369384 1_4:-507826 Msa0141770:CDS
CTTGAATTTCTTTGGCAAGA+AGG 0.374606 1_4:-508022 Msa0141770:CDS
AACACTTTCCCTTGCTTCCC+AGG 0.380427 1_4:+504919 None:intergenic
GTGCAGTTCACAGATGAAAA+TGG 0.386375 1_4:-506580 Msa0141770:CDS
GGCGGTGGCGGAGAATGATT+GGG 0.387864 1_4:+509868 None:intergenic
TCTTCCTCTCTTGATTAATC+AGG 0.388403 1_4:-508193 Msa0141770:intron
TCCCTATGGTTACGCCATTT+GGG 0.391559 1_4:-509646 Msa0141770:CDS
TCCAAAGATTGCACCGATAC+AGG 0.393092 1_4:-506458 Msa0141770:intron
TTCACAATGGTTTCACTTGT+AGG 0.397403 1_4:+508252 None:intergenic
GAAAGTGTTTGGAATCTCTA+TGG 0.397700 1_4:-504905 Msa0141770:CDS
AGGAAACTGGAGCAACTATC+AGG 0.398901 1_4:-504161 Msa0141770:CDS
CTGCAATATCACAAGGCAAA+TGG 0.399141 1_4:-504353 Msa0141770:CDS
CAATCTTTGGAGGAAGCATT+AGG 0.399281 1_4:+506470 None:intergenic
AGTTAGCAGTAGTGACAATT+GGG 0.403138 1_4:-508476 Msa0141770:CDS
AGCTTGTTCAAAAGCAAATC+TGG 0.405332 1_4:+507845 None:intergenic
ATTCAATTTCTGGGAAATGA+AGG 0.410990 1_4:-505147 Msa0141770:intron
CTTTCGTCCCTTTGCTCTAA+GGG 0.412454 1_4:+503778 None:intergenic
CGGACCGTAATCTGCTAATT+CGG 0.418329 1_4:+509692 None:intergenic
GCAAATGGGCAAGGGGCCCT+TGG 0.418567 1_4:-504338 Msa0141770:CDS
AATATATTTGGCAGACATCA+TGG 0.419041 1_4:-506549 Msa0141770:CDS
GGGAAGCAAGGGAAAGTGTT+TGG 0.420165 1_4:-504916 Msa0141770:CDS
TTAAAAGTGAAAGAGGAAAC+TGG 0.421097 1_4:-504174 Msa0141770:CDS
CAGAAATTGAATTTCCATCC+AGG 0.425508 1_4:+505158 None:intergenic
ATAACCATTGTACCGCGAAC+CGG 0.425988 1_4:+509672 None:intergenic
TGGATGGAAATTCAATTTCT+GGG 0.428325 1_4:-505156 Msa0141770:CDS
ACATACACCTCCAAAATTGA+AGG 0.437424 1_4:+504880 None:intergenic
TGCAATATCACAAGGCAAAT+GGG 0.439132 1_4:-504352 Msa0141770:CDS
GAAAAGTTTGGCCAAGGTTG+TGG 0.440170 1_4:+507706 None:intergenic
AATTCAAGAGTTCTAACAAA+TGG 0.442257 1_4:+508037 None:intergenic
GAGTTAGCAGTAGTGACAAT+TGG 0.442737 1_4:-508477 Msa0141770:CDS
TGAAAGGTTGGTGACGGCGG+TGG 0.445524 1_4:+509853 None:intergenic
TAATAATATGATTTATGGGT+GGG 0.449328 1_4:-504012 Msa0141770:three_prime_UTR
AATGTCAAGTTCAAGGAGAC+TGG 0.459172 1_4:-509510 Msa0141770:CDS
TCTAAAGTGGAAACATTTGC+TGG 0.460420 1_4:-507795 Msa0141770:CDS
GTGGAAGTGTGGTGATATCC+AGG 0.467177 1_4:-504951 Msa0141770:CDS
ATTAAAAGATGTTTGATGAC+AGG 0.474053 1_4:-504111 Msa0141770:CDS
ACAATGGTTATTCGTCCCTA+TGG 0.476175 1_4:-509660 Msa0141770:CDS
CTAGGAGTGATGACTCGGTC+AGG 0.476493 1_4:+509759 None:intergenic
TCTTTCTCTATAAAGGAGTA+AGG 0.477392 1_4:+508528 None:intergenic
AGATGAGTTAAAAGTGAAAG+AGG 0.477450 1_4:-504181 Msa0141770:CDS
AATTGTACCAATTTGGAAGA+AGG 0.481601 1_4:-505282 Msa0141770:CDS
CTTCCCAGGAATATCTCTCC+TGG 0.482230 1_4:+504933 None:intergenic
CACAGATGAAAATGGACAAA+GGG 0.483190 1_4:-506572 Msa0141770:CDS
AAAGAAGCTCTTCAAAGCTC+TGG 0.483538 1_4:-505218 Msa0141770:CDS
GCTTGAACCCTTAGAGCAAA+GGG 0.484129 1_4:-503785 Msa0141770:three_prime_UTR
CACTTCCACTAGACACGTCC+CGG 0.484364 1_4:+504965 None:intergenic
TTATTTGAATGTCAAGTTCA+AGG 0.486269 1_4:-509517 Msa0141770:CDS
GTCTTTGGCCTCTGCTGCAG+TGG 0.486813 1_4:+509809 None:intergenic
AAGGTTGGTGACGGCGGTGG+CGG 0.488368 1_4:+509856 None:intergenic
AGTTTGGCCAAGGTTGTGGC+TGG 0.493603 1_4:+507710 None:intergenic
AACCTGAATGGCTTCCCAAA+TGG 0.497397 1_4:+509632 None:intergenic
GCAGATTACGGTCCGGTTCG+CGG 0.498963 1_4:-509684 Msa0141770:CDS
GCTGCCATACCTGTTATTAC+GGG 0.500792 1_4:-507825 Msa0141770:CDS
TGAGAAATTGCTGTTGTTGA+GGG 0.506381 1_4:+509897 None:intergenic
GGACCAATTTCAATTCTAAG+AGG 0.507990 1_4:+504988 None:intergenic
CTACACGATTGAGGCAATGA+TGG 0.509021 1_4:-507760 Msa0141770:CDS
GAGGAAGATCACGGTAGCTA+TGG 0.509612 1_4:+508208 None:intergenic
GACTCAGATCAAAGAACCCC+TGG 0.510899 1_4:-505176 Msa0141770:CDS
AAAGAAGCAAGTCATGTTGA+GGG 0.511967 1_4:-508510 Msa0141770:CDS
CGCCAAAACCACTGCAGCAG+AGG 0.513327 1_4:-509817 Msa0141770:CDS
AAAATAGCCACTTCTTCAGC+AGG 0.513654 1_4:+504084 None:intergenic
CTTAGGCAAAAGTTGTATAA+GGG 0.514326 1_4:-503931 Msa0141770:three_prime_UTR
AGAGATATTCCTGGGAAGCA+AGG 0.516068 1_4:-504928 Msa0141770:CDS
AGAAGGTGGCGGTGAAAGGT+TGG 0.519073 1_4:+509841 None:intergenic
GCGGAGAAGGTGGCGGTGAA+AGG 0.520115 1_4:+509837 None:intergenic
GGTGTATGTTAAAGACAAGT+TGG 0.524044 1_4:-504866 Msa0141770:CDS
TAGAATTGAAATTGGTCCCC+GGG 0.525862 1_4:-504983 Msa0141770:CDS
TTCCCAAATGGCGTAACCAT+AGG 0.529134 1_4:+509644 None:intergenic
AATGCCGAATTAGCAGATTA+CGG 0.529226 1_4:-509696 Msa0141770:CDS
CTGACCGAGTCATCACTCCT+AGG 0.534702 1_4:-509758 Msa0141770:CDS
GAGAAATTGCTGTTGTTGAG+GGG 0.535670 1_4:+509898 None:intergenic
GCATTGAAGTCCTGTGACCT+AGG 0.538432 1_4:+509741 None:intergenic
TATCACAAGGCAAATGGGCA+AGG 0.539052 1_4:-504347 Msa0141770:CDS
TCGACCCGTAATAACAGGTA+TGG 0.539172 1_4:+507821 None:intergenic
TCCAGAAGAGGCAGAAAATG+AGG 0.539198 1_4:-507981 Msa0141770:intron
GTAATCTGCTAATTCGGCAT+TGG 0.539992 1_4:+509698 None:intergenic
TGCTTGAACCCTTAGAGCAA+AGG 0.540304 1_4:-503786 Msa0141770:three_prime_UTR
TCCCAAATGGCGTAACCATA+GGG 0.541410 1_4:+509645 None:intergenic
TTGGAGAAGAGTGAAAGAGG+AGG 0.544001 1_4:+509976 None:intergenic
AGAAATTGAATTTCCATCCA+GGG 0.544417 1_4:+505159 None:intergenic
AGAAATTGCTGTTGTTGAGG+GGG 0.546767 1_4:+509899 None:intergenic
TGTATCGGTGCAATCTTTGG+AGG 0.548894 1_4:+506460 None:intergenic
TACGGGTCGAAAATCTAAAG+TGG 0.549532 1_4:-507808 Msa0141770:CDS
GAAAGAAGCAAGTCATGTTG+AGG 0.549877 1_4:-508511 Msa0141770:CDS
AGTGGGCAAATGTCACAAGA+TGG 0.552413 1_4:-508075 Msa0141770:CDS
TTCCCGTGCCTTTGAAACAC+AGG 0.553524 1_4:-507686 Msa0141770:intron
GACAAGAAAGCATTGCAAGC+AGG 0.555118 1_4:-507735 Msa0141770:CDS
ATCACAAGGCAAATGGGCAA+GGG 0.555350 1_4:-504346 Msa0141770:CDS
GCATCAGACCTGTGTTTCAA+AGG 0.556209 1_4:+507678 None:intergenic
TGCTCATGCAACTCCAGAAG+AGG 0.559996 1_4:-507993 Msa0141770:CDS
TTAATTTCTTGTTACCACTT+AGG 0.560972 1_4:-503948 Msa0141770:three_prime_UTR
GCATCCAACCATACCTGTAT+CGG 0.561155 1_4:+506445 None:intergenic
AGACCTGTGTTTCAAAGGCA+CGG 0.561432 1_4:+507683 None:intergenic
GACCTGTGTTTCAAAGGCAC+GGG 0.565333 1_4:+507684 None:intergenic
GAGATATTCCTGGGAAGCAA+GGG 0.565396 1_4:-504927 Msa0141770:CDS
GGTCCCCGGGACGTGTCTAG+TGG 0.566931 1_4:-504970 Msa0141770:CDS
CTAATAATATGATTTATGGG+TGG 0.568766 1_4:-504013 Msa0141770:three_prime_UTR
GGAGGCATCATCATGGTACA+TGG 0.569062 1_4:-506505 Msa0141770:CDS
GAAATTGAATTTCCATCCAG+GGG 0.569742 1_4:+505160 None:intergenic
CAATGGTTTCACTTGTAGGT+CGG 0.569797 1_4:+508256 None:intergenic
TTAGAATTGAAATTGGTCCC+CGG 0.570679 1_4:-504984 Msa0141770:CDS
ACTTCCACTAGACACGTCCC+GGG 0.571135 1_4:+504966 None:intergenic
ATATCCAGGAGAGATATTCC+TGG 0.571372 1_4:-504937 Msa0141770:CDS
AGGAGATCCTGCTGAAGAAG+TGG 0.571589 1_4:-504091 Msa0141770:CDS
CGGTGAAAGGTTGGTGACGG+CGG 0.571786 1_4:+509850 None:intergenic
GTGGGCAAATGTCACAAGAT+GGG 0.573271 1_4:-508074 Msa0141770:CDS
GCAGGAACCAGCCACAACCT+TGG 0.576341 1_4:-507717 Msa0141770:CDS
GTGAGAAATTGCTGTTGTTG+AGG 0.578924 1_4:+509896 None:intergenic
ATATATTTGGCAGACATCAT+GGG 0.579832 1_4:-506548 Msa0141770:CDS
CGGTCCGGTTCGCGGTACAA+TGG 0.585347 1_4:-509676 Msa0141770:CDS
GCACGGGAAAAGTTTGGCCA+AGG 0.585830 1_4:+507700 None:intergenic
TTTACCTGATTAATCAAGAG+AGG 0.586404 1_4:+508189 None:intergenic
AGTCATCACTCCTAGGTCAC+AGG 0.587801 1_4:-509751 Msa0141770:CDS
GAGGTAGAGAGAGTGAGATG+AGG 0.589946 1_4:+509995 None:intergenic
ATTGTCACTACTGCTAACTC+TGG 0.591910 1_4:+508480 None:intergenic
CAGATCAAAGAACCCCTGGA+TGG 0.591928 1_4:-505172 Msa0141770:CDS
TATCCAGGAGAGATATTCCT+GGG 0.592768 1_4:-504936 Msa0141770:CDS
TACACGATTGAGGCAATGAT+GGG 0.595098 1_4:-507759 Msa0141770:CDS
CGAATTAGCAGATTACGGTC+CGG 0.596537 1_4:-509691 Msa0141770:CDS
TCACAAGGCAAATGGGCAAG+GGG 0.599892 1_4:-504345 Msa0141770:CDS
CTTAAATCTGCAATATCACA+AGG 0.602226 1_4:-504360 Msa0141770:CDS
TCACAGATGAAAATGGACAA+AGG 0.608406 1_4:-506573 Msa0141770:CDS
TTCCATTTGAACAGCCACAA+GGG 0.611470 1_4:-504134 Msa0141770:CDS
TTTCCATTTGAACAGCCACA+AGG 0.612338 1_4:-504135 Msa0141770:CDS
CTTGAGAGACACCATTTGTG+TGG 0.613060 1_4:+509950 None:intergenic
TTGTAAGACCTACACGATTG+AGG 0.616283 1_4:-507769 Msa0141770:CDS
ATGGTACATGGAGATGATGC+TGG 0.617498 1_4:-506493 Msa0141770:CDS
GTGACCTAGGAGTGATGACT+CGG 0.622486 1_4:+509754 None:intergenic
TGGCGGTGAAAGGTTGGTGA+CGG 0.625593 1_4:+509847 None:intergenic
GGCGGAGAATGATTGGGGAA+CGG 0.627567 1_4:+509874 None:intergenic
AACACAACCTAGCAGACCAA+GGG 0.628350 1_4:+504322 None:intergenic
AGTAAACATGTGATTCACAA+TGG 0.630715 1_4:+508239 None:intergenic
CATCATTGCCTCAATCGTGT+AGG 0.631552 1_4:+507761 None:intergenic
TAGGAGTGATGACTCGGTCA+GGG 0.637146 1_4:+509760 None:intergenic
TGAATCACATGTTTACTCAG+TGG 0.643424 1_4:-508233 Msa0141770:CDS
GATTCTTCGAGTTGTCGACT+CGG 0.646760 1_4:+509787 None:intergenic
AAACACAACCTAGCAGACCA+AGG 0.647106 1_4:+504321 None:intergenic
TAATCAAGAGAGGAAGATCA+CGG 0.658472 1_4:+508199 None:intergenic
GTTAGCAGTAGTGACAATTG+GGG 0.660405 1_4:-508475 Msa0141770:CDS
GGACGTGTCTAGTGGAAGTG+TGG 0.684037 1_4:-504962 Msa0141770:CDS
GCGGTGGCGGAGAATGATTG+GGG 0.684633 1_4:+509869 None:intergenic
GGAACTTGAAGAGAAGCTCG+TGG 0.700042 1_4:-508445 Msa0141770:intron
CTTCCACTAGACACGTCCCG+GGG 0.711499 1_4:+504967 None:intergenic
TATTTGGCAGACATCATGGG+CGG 0.711856 1_4:-506545 Msa0141770:CDS
TTAGCAGTAGTGACAATTGG+GGG 0.717559 1_4:-508474 Msa0141770:CDS
GGTCACAGGACTTCAATGCG+TGG 0.719791 1_4:-509737 Msa0141770:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! TAAATAAATAAATAAATAAA+TGG + chr1_4:504235-504254 None:intergenic 0.0%
!! TTTCTAATAATATGATTTAT+GGG - chr1_4:509773-509792 Msa0141770:CDS 10.0%
!! CAAAAAAATTAAAGTAAAAC+AGG + chr1_4:504396-504415 None:intergenic 15.0%
!!! GTGTTATTAAATCAATTATA+TGG - chr1_4:504422-504441 Msa0141770:intron 15.0%
!!! AAGCGAAATTTAAAATTTAA+AGG + chr1_4:505011-505030 None:intergenic 15.0%
!!! TTATCTTTTAGAATCATATA+TGG - chr1_4:506188-506207 Msa0141770:intron 15.0%
!!! GTATAATTTTATGACTAATT+TGG + chr1_4:506573-506592 None:intergenic 15.0%
!! TGTATATTAGTAGAAAAATA+TGG + chr1_4:506659-506678 None:intergenic 15.0%
!! TCATAAGTTTCAATTTAAAT+TGG + chr1_4:506862-506881 None:intergenic 15.0%
!! AAAAATTGAGTTATATGATA+TGG + chr1_4:506963-506982 None:intergenic 15.0%
!!! ATATTATCCATTTTCTTTTA+TGG - chr1_4:507102-507121 Msa0141770:intron 15.0%
!!! TATTATCCATTTTCTTTTAT+GGG - chr1_4:507103-507122 Msa0141770:intron 15.0%
!! AATAGAGATATAATATATGA+TGG - chr1_4:507801-507820 Msa0141770:CDS 15.0%
!! TTAATCTTTACCAAATTATA+AGG - chr1_4:508264-508283 Msa0141770:intron 15.0%
!! CTTTCTAATAATATGATTTA+TGG - chr1_4:509772-509791 Msa0141770:CDS 15.0%
!!! TTATTTAGTTTTGTTTGTGT+AGG - chr1_4:504248-504267 Msa0141770:intron 20.0%
!! TTTATCTTGTGTTAAAGAAA+TGG + chr1_4:504508-504527 None:intergenic 20.0%
!! CAACATAATCTTAAGTAAAA+AGG + chr1_4:504947-504966 None:intergenic 20.0%
!!! GGTAATGAAATTTTATGTTA+TGG + chr1_4:505195-505214 None:intergenic 20.0%
!! AGAAAAACAGTCATAAAAAA+AGG + chr1_4:505386-505405 None:intergenic 20.0%
!!! TGTTTTTCTTCACATATTAT+CGG - chr1_4:505397-505416 Msa0141770:intron 20.0%
!!! TTTGATTTTTCCATTTTTTG+AGG - chr1_4:505499-505518 Msa0141770:intron 20.0%
!!! AATATGAGATTTTTTTTCAC+CGG - chr1_4:506371-506390 Msa0141770:intron 20.0%
!! AAATATGGTCAAAATAAGTT+AGG + chr1_4:506644-506663 None:intergenic 20.0%
!! AAATGAATAAAAACAGAAGT+GGG + chr1_4:507075-507094 None:intergenic 20.0%
!! TAAATGAATAAAAACAGAAG+TGG + chr1_4:507076-507095 None:intergenic 20.0%
!!! ATTATCCATTTTCTTTTATG+GGG - chr1_4:507104-507123 Msa0141770:intron 20.0%
!!! ATAATATATGATGGAAATTG+AGG - chr1_4:507810-507829 Msa0141770:CDS 20.0%
!! TGAGAATCTTATAAAATGAA+AGG + chr1_4:508317-508336 None:intergenic 20.0%
!! TTTATAAGATTCTCATTTGA+AGG - chr1_4:508322-508341 Msa0141770:intron 20.0%
!! TTATAAGATTCTCATTTGAA+GGG - chr1_4:508323-508342 Msa0141770:intron 20.0%
!! TATATTCAGATAGTCAAATA+TGG + chr1_4:508746-508765 None:intergenic 20.0%
!!! TATTTTTTTCTTCCAATTTC+AGG - chr1_4:508773-508792 Msa0141770:intron 20.0%
!!! ATTTTTTTCTTCCAATTTCA+GGG - chr1_4:508774-508793 Msa0141770:intron 20.0%
!! TAATAATATGATTTATGGGT+GGG - chr1_4:509777-509796 Msa0141770:CDS 20.0%
! AATGGCAAAATGAAAATTGA+AGG + chr1_4:504217-504236 None:intergenic 25.0%
! TTATTTGAATGTCAAGTTCA+AGG - chr1_4:504272-504291 Msa0141770:intron 25.0%
! ATAAGTTGTTTATCCAAACA+AGG + chr1_4:504448-504467 None:intergenic 25.0%
!!! ACTTATTTTGCAGCTTATAT+AGG - chr1_4:504462-504481 Msa0141770:intron 25.0%
!! TTTTAAATTTCGCTTGTACT+TGG - chr1_4:505016-505035 Msa0141770:intron 25.0%
! TTTAAATTTCGCTTGTACTT+GGG - chr1_4:505017-505036 Msa0141770:intron 25.0%
! TTTGTAGTGTAAGAATATGA+GGG - chr1_4:505127-505146 Msa0141770:intron 25.0%
!!! AAAGTGATATCTTGATAATG+TGG - chr1_4:505156-505175 Msa0141770:CDS 25.0%
!! GTTTTTCTTCACATATTATC+GGG - chr1_4:505398-505417 Msa0141770:intron 25.0%
! AAAATCAAAGACAAAACCTT+AGG + chr1_4:505488-505507 None:intergenic 25.0%
!! AATTCAAGAGTTCTAACAAA+TGG + chr1_4:505755-505774 None:intergenic 25.0%
! TTAGAACTCTTGAATTTCTT+TGG - chr1_4:505759-505778 Msa0141770:intron 25.0%
! AGAAAAAAAAAATACTCCAC+AGG + chr1_4:506163-506182 None:intergenic 25.0%
!!! TTTTTTTCTTCTGTGAGTTA+TGG - chr1_4:506280-506299 Msa0141770:intron 25.0%
! TTAAGCTCAAAATTATGCAT+TGG - chr1_4:506780-506799 Msa0141770:intron 25.0%
! AATGAATAAAAACAGAAGTG+GGG + chr1_4:507074-507093 None:intergenic 25.0%
!! ATTTCTCTTGTAGTTTTTCT+AGG + chr1_4:507750-507769 None:intergenic 25.0%
! TTTCATACATAACATCCAAT+AGG - chr1_4:507922-507941 Msa0141770:intron 25.0%
! TTACATGCAAAATGATTTCA+TGG + chr1_4:508075-508094 None:intergenic 25.0%
! AACTTCAGTTAGAGTATATT+CGG - chr1_4:508185-508204 Msa0141770:intron 25.0%
! TCATAGCATTCCTTATAATT+TGG + chr1_4:508277-508296 None:intergenic 25.0%
! TATATTTGGATGTAGAAGTT+TGG + chr1_4:508389-508408 None:intergenic 25.0%
! AAACTTCTACATCCAAATAT+AGG - chr1_4:508388-508407 Msa0141770:intron 25.0%
! CATGTAAACTATCCTATATT+TGG + chr1_4:508403-508422 None:intergenic 25.0%
!! ACTTGGATAGATTTCATTTT+TGG - chr1_4:508676-508695 Msa0141770:intron 25.0%
!!! CTTGGATAGATTTCATTTTT+GGG - chr1_4:508677-508696 Msa0141770:intron 25.0%
!!! CAAGTAAAAAGTATCACAAA+AGG + chr1_4:509005-509024 None:intergenic 25.0%
!! TTTTACTTGTGATAGACATT+TGG - chr1_4:509016-509035 Msa0141770:intron 25.0%
! AAGACTAGAATATATCATTC+AGG + chr1_4:509099-509118 None:intergenic 25.0%
!!! CTTCTGAAAAGTATTTAACT+AGG + chr1_4:509133-509152 None:intergenic 25.0%
!! CTAGTTAAATACTTTTCAGA+AGG - chr1_4:509131-509150 Msa0141770:intron 25.0%
! ATTTAGTGTATTACATAGAG+TGG + chr1_4:509188-509207 None:intergenic 25.0%
! AATTCCAATCTCTATTAGAA+AGG - chr1_4:509250-509269 Msa0141770:intron 25.0%
! ATTTCCTTTCTAATAGAGAT+TGG + chr1_4:509257-509276 None:intergenic 25.0%
! CTATTAGAAAGGAAATCAAT+TGG - chr1_4:509261-509280 Msa0141770:intron 25.0%
!! ATTAAAAGATGTTTGATGAC+AGG - chr1_4:509678-509697 Msa0141770:CDS 25.0%
! CTAATAATATGATTTATGGG+TGG - chr1_4:509776-509795 Msa0141770:CDS 25.0%
! TTAATTTCTTGTTACCACTT+AGG - chr1_4:509841-509860 Msa0141770:CDS 25.0%
AGAAAAAGAATGAACCTGAA+TGG + chr1_4:504172-504191 None:intergenic 30.0%
! TAGTAACATGTATTTTCCAC+AGG - chr1_4:504305-504324 Msa0141770:intron 30.0%
TGGTAATTAATGTTTACCTG+TGG + chr1_4:504324-504343 None:intergenic 30.0%
! TATCTGCAATTTGTTTGCAT+AGG - chr1_4:504365-504384 Msa0141770:CDS 30.0%
!! ATCAATTATATGGCCTTGTT+TGG - chr1_4:504432-504451 Msa0141770:intron 30.0%
TAAGCTATCCTAGTGAATTT+AGG - chr1_4:504556-504575 Msa0141770:intron 30.0%
AAGCTATCCTAGTGAATTTA+GGG - chr1_4:504557-504576 Msa0141770:intron 30.0%
CTTATTTCCCTAAATTCACT+AGG + chr1_4:504567-504586 None:intergenic 30.0%
AATATCTGATCTGACACTAT+GGG + chr1_4:504703-504722 None:intergenic 30.0%
AACGTCGAAAAAATTAAGCT+AGG + chr1_4:504726-504745 None:intergenic 30.0%
ACAATAAAAAAAGGGTAACC+CGG + chr1_4:504859-504878 None:intergenic 30.0%
CTACAAACAGTACAAGATAT+AGG + chr1_4:505114-505133 None:intergenic 30.0%
GTTTGTAGTGTAAGAATATG+AGG - chr1_4:505126-505145 Msa0141770:intron 30.0%
TCTTTCTCTATAAAGGAGTA+AGG + chr1_4:505264-505283 None:intergenic 30.0%
ACTTGCTTCTTTCTCTATAA+AGG + chr1_4:505271-505290 None:intergenic 30.0%
AGTAAACATGTGATTCACAA+TGG + chr1_4:505553-505572 None:intergenic 30.0%
TTTACCTGATTAATCAAGAG+AGG + chr1_4:505603-505622 None:intergenic 30.0%
TTCATTCAACAGGAAAAAAC+AGG + chr1_4:505686-505705 None:intergenic 30.0%
!!! GTTTTTTCCTGTTGAATGAA+CGG - chr1_4:505686-505705 Msa0141770:intron 30.0%
!!! TTTTTTCCTGTTGAATGAAC+GGG - chr1_4:505687-505706 Msa0141770:intron 30.0%
TAGTAACAAATAAGAAGTCG+TGG + chr1_4:506312-506331 None:intergenic 30.0%
!! TTACTGAAACTTTGAGTTGA+CGG + chr1_4:506353-506372 None:intergenic 30.0%
!!! GCTGTTTTTCTGTAAATAAG+AGG - chr1_4:506419-506438 Msa0141770:intron 30.0%
! GTTTTTCTGTAAATAAGAGG+AGG - chr1_4:506422-506441 Msa0141770:intron 30.0%
ACAACAATCCTTCCTAAAAT+AGG - chr1_4:506500-506519 Msa0141770:CDS 30.0%
!! TTGGATTTCCTATTTTAGGA+AGG + chr1_4:506511-506530 None:intergenic 30.0%
! CTAGTTGGATTTCCTATTTT+AGG + chr1_4:506515-506534 None:intergenic 30.0%
! GTTTTTGTACAAGTGATAGT+AGG + chr1_4:506539-506558 None:intergenic 30.0%
TTCAAATGAGTCATCTATTG+CGG + chr1_4:506606-506625 None:intergenic 30.0%
TCAACTGTGTCATGTATTAA+GGG - chr1_4:506817-506836 Msa0141770:intron 30.0%
GCTTGGATTTATCATAAGTA+GGG + chr1_4:506927-506946 None:intergenic 30.0%
ATGATATGGCACAATCAATA+TGG + chr1_4:506949-506968 None:intergenic 30.0%
TTGATTAAATCCTTTCAACG+AGG - chr1_4:507161-507180 Msa0141770:intron 30.0%
ATGGACAAAGGGAATATATT+TGG - chr1_4:507228-507247 Msa0141770:intron 30.0%
AATATATTTGGCAGACATCA+TGG - chr1_4:507240-507259 Msa0141770:intron 30.0%
ATATATTTGGCAGACATCAT+GGG - chr1_4:507241-507260 Msa0141770:intron 30.0%
CATGTGTAGATATCTTTGTT+AGG - chr1_4:507382-507401 Msa0141770:intron 30.0%
TTACATTACTTGTCTGATCA+AGG + chr1_4:507444-507463 None:intergenic 30.0%
!! AGATTTGCTACACAAGAATA+TGG - chr1_4:507463-507482 Msa0141770:intron 30.0%
!! GATTTGCTACACAAGAATAT+GGG - chr1_4:507464-507483 Msa0141770:intron 30.0%
GACCTATAGTTTATGTAGTA+AGG - chr1_4:507680-507699 Msa0141770:intron 30.0%
CTCCTTACTACATAAACTAT+AGG + chr1_4:507685-507704 None:intergenic 30.0%
! TGAGATCAGATTTTGAATTG+AGG + chr1_4:507953-507972 None:intergenic 30.0%
TCATGGAAGAAAATGAATTG+AGG + chr1_4:508058-508077 None:intergenic 30.0%
TTCTTAGTGTAATATCTCAC+TGG - chr1_4:508138-508157 Msa0141770:intron 30.0%
AATTGTACCAATTTGGAAGA+AGG - chr1_4:508507-508526 Msa0141770:CDS 30.0%
GAAGAAGGATGATGAAAAAA+TGG - chr1_4:508522-508541 Msa0141770:CDS 30.0%
AGAAATTGAATTTCCATCCA+GGG + chr1_4:508633-508652 None:intergenic 30.0%
TGGATGGAAATTCAATTTCT+GGG - chr1_4:508633-508652 Msa0141770:intron 30.0%
! ATTCAATTTCTGGGAAATGA+AGG - chr1_4:508642-508661 Msa0141770:intron 30.0%
CAGAATCAATGTGTACAATT+TGG + chr1_4:508704-508723 None:intergenic 30.0%
GTTCCTCTTAGAATTGAAAT+TGG - chr1_4:508798-508817 Msa0141770:intron 30.0%
CTTAAATCTGCAATATCACA+AGG - chr1_4:509429-509448 Msa0141770:intron 30.0%
GTCATTAGAGTTGTTAATCA+TGG + chr1_4:509563-509582 None:intergenic 30.0%
AGATGAGTTAAAAGTGAAAG+AGG - chr1_4:509608-509627 Msa0141770:intron 30.0%
TTAAAAGTGAAAGAGGAAAC+TGG - chr1_4:509615-509634 Msa0141770:intron 30.0%
! AAACATCTTTTAATCCCTTG+TGG + chr1_4:509672-509691 None:intergenic 30.0%
! TTATACAACTTTTGCCTAAG+TGG + chr1_4:509858-509877 None:intergenic 30.0%
ACTTAGGCAAAAGTTGTATA+AGG - chr1_4:509857-509876 Msa0141770:CDS 30.0%
CTTAGGCAAAAGTTGTATAA+GGG - chr1_4:509858-509877 Msa0141770:CDS 30.0%
!! TTTTTGGAGAAGAGTGAAAG+AGG + chr1_4:503819-503838 None:intergenic 35.0%
TTCTCCAAAAACCACACAAA+TGG - chr1_4:503828-503847 Msa0141770:three_prime_UTR 35.0%
! TGAGAAATTGCTGTTGTTGA+GGG + chr1_4:503895-503914 None:intergenic 35.0%
AATGCCGAATTAGCAGATTA+CGG - chr1_4:504093-504112 Msa0141770:CDS 35.0%
GAATATCTGATCTGACACTA+TGG + chr1_4:504704-504723 None:intergenic 35.0%
TTAAGGCTGCTTGTAAAAAC+AGG - chr1_4:504761-504780 Msa0141770:intron 35.0%
TAAGGCTGCTTGTAAAAACA+GGG - chr1_4:504762-504781 Msa0141770:intron 35.0%
!! GAAGGCATCAAACAAATGAT+GGG + chr1_4:505216-505235 None:intergenic 35.0%
!! AGAAGGCATCAAACAAATGA+TGG + chr1_4:505217-505236 None:intergenic 35.0%
AAAGAAGCAAGTCATGTTGA+GGG - chr1_4:505279-505298 Msa0141770:CDS 35.0%
AGTTAGCAGTAGTGACAATT+GGG - chr1_4:505313-505332 Msa0141770:intron 35.0%
!!! TTTTCCATTTTTTGAGGCTG+TGG - chr1_4:505505-505524 Msa0141770:intron 35.0%
TTCACAATGGTTTCACTTGT+AGG + chr1_4:505540-505559 None:intergenic 35.0%
TGAATCACATGTTTACTCAG+TGG - chr1_4:505556-505575 Msa0141770:intron 35.0%
TAATCAAGAGAGGAAGATCA+CGG + chr1_4:505593-505612 None:intergenic 35.0%
TCTTCCTCTCTTGATTAATC+AGG - chr1_4:505596-505615 Msa0141770:intron 35.0%
! TTTTGCTTACAAACGAAACC+AGG + chr1_4:505632-505651 None:intergenic 35.0%
CTTGAATTTCTTTGGCAAGA+AGG - chr1_4:505767-505786 Msa0141770:intron 35.0%
ATCTTGACGAAGAGAATATG+CGG + chr1_4:505835-505854 None:intergenic 35.0%
! AGCTTGTTCAAAAGCAAATC+TGG + chr1_4:505947-505966 None:intergenic 35.0%
! TCTAAAGTGGAAACATTTGC+TGG - chr1_4:505994-506013 Msa0141770:intron 35.0%
CACAAAATACTTCATTCCTG+TGG - chr1_4:506144-506163 Msa0141770:intron 35.0%
!! AGCTTGCTACTTAAAGTTCA+AGG + chr1_4:506216-506235 None:intergenic 35.0%
! CTTGATTTTGCCAGCTATTT+CGG - chr1_4:506234-506253 Msa0141770:intron 35.0%
TTTAAAGAGACCGAAATAGC+TGG + chr1_4:506247-506266 None:intergenic 35.0%
TTGCAGCTAATGTAGCATTA+AGG - chr1_4:506394-506413 Msa0141770:intron 35.0%
TTCTGTAAATAAGAGGAGGT+AGG - chr1_4:506426-506445 Msa0141770:intron 35.0%
AAATAAGAGGAGGTAGGATT+AGG - chr1_4:506432-506451 Msa0141770:intron 35.0%
TCAAATGAGTCATCTATTGC+GGG + chr1_4:506605-506624 None:intergenic 35.0%
! TATGCATTGGTATGCGTAAT+AGG - chr1_4:506793-506812 Msa0141770:intron 35.0%
! ATGCATTGGTATGCGTAATA+GGG - chr1_4:506794-506813 Msa0141770:intron 35.0%
GTCAACTGTGTCATGTATTA+AGG - chr1_4:506816-506835 Msa0141770:intron 35.0%
GGCTTGGATTTATCATAAGT+AGG + chr1_4:506928-506947 None:intergenic 35.0%
! GACTATAGCAAACCTTTTAG+TGG - chr1_4:507025-507044 Msa0141770:intron 35.0%
GAAGACCCCATAAAAGAAAA+TGG + chr1_4:507112-507131 None:intergenic 35.0%
TCACAGATGAAAATGGACAA+AGG - chr1_4:507216-507235 Msa0141770:intron 35.0%
CACAGATGAAAATGGACAAA+GGG - chr1_4:507217-507236 Msa0141770:intron 35.0%
GGTTAAATGTAGCACTTTAG+AGG - chr1_4:507403-507422 Msa0141770:intron 35.0%
!!! CGCTTATTTTATGCTCGAAT+TGG + chr1_4:507513-507532 None:intergenic 35.0%
ACAACATTAGAGAGAGACTT+GGG - chr1_4:507595-507614 Msa0141770:intron 35.0%
AGTAAGGAGAGTAGATAAGA+CGG - chr1_4:507696-507715 Msa0141770:CDS 35.0%
TCAGTTAGAGTATATTCGGA+TGG - chr1_4:508189-508208 Msa0141770:intron 35.0%
AGGTGGTAATTGTACCAATT+TGG - chr1_4:508500-508519 Msa0141770:CDS 35.0%
TCATCATCCTTCTTCCAAAT+TGG + chr1_4:508517-508536 None:intergenic 35.0%
GAAATTGAATTTCCATCCAG+GGG + chr1_4:508632-508651 None:intergenic 35.0%
CAGAAATTGAATTTCCATCC+AGG + chr1_4:508634-508653 None:intergenic 35.0%
CTGGATGGAAATTCAATTTC+TGG - chr1_4:508632-508651 Msa0141770:intron 35.0%
! ATTTCTGGGAAATGAAGGTT+CGG - chr1_4:508647-508666 Msa0141770:intron 35.0%
TGAAGGTTCGGATTTAAACT+TGG - chr1_4:508659-508678 Msa0141770:intron 35.0%
! ATTGATTCTGTTTATGCTGC+TGG - chr1_4:508714-508733 Msa0141770:intron 35.0%
GGACCAATTTCAATTCTAAG+AGG + chr1_4:508804-508823 None:intergenic 35.0%
TTAGAATTGAAATTGGTCCC+CGG - chr1_4:508805-508824 Msa0141770:intron 35.0%
!! GAAAGTGTTTGGAATCTCTA+TGG - chr1_4:508884-508903 Msa0141770:intron 35.0%
ACATACACCTCCAAAATTGA+AGG + chr1_4:508912-508931 None:intergenic 35.0%
GGTGTATGTTAAAGACAAGT+TGG - chr1_4:508923-508942 Msa0141770:intron 35.0%
AGACATTTGGATCTAACTGT+TGG - chr1_4:509029-509048 Msa0141770:intron 35.0%
! TGTATTACATAGAGTGGACT+TGG + chr1_4:509182-509201 None:intergenic 35.0%
! AAAGCATTAGAGACAGTTCT+CGG + chr1_4:509215-509234 None:intergenic 35.0%
AACTGTCTCTAATGCTTTAG+TGG - chr1_4:509217-509236 Msa0141770:intron 35.0%
TGCAATATCACAAGGCAAAT+GGG - chr1_4:509437-509456 Msa0141770:intron 35.0%
GTTGTTAATCATGGTCTTTC+TGG + chr1_4:509554-509573 None:intergenic 35.0%
CTTGCAGAGTTAGTAAGATT+TGG + chr1_4:509733-509752 None:intergenic 35.0%
ATCTGCTGTCATTGTGTAAA+AGG - chr1_4:509914-509933 Msa0141770:CDS 35.0%
! GACACCATTTGTGTGGTTTT+TGG + chr1_4:503835-503854 None:intergenic 40.0%
! AGAAATTGCTGTTGTTGAGG+GGG + chr1_4:503893-503912 None:intergenic 40.0%
! GAGAAATTGCTGTTGTTGAG+GGG + chr1_4:503894-503913 None:intergenic 40.0%
! GTGAGAAATTGCTGTTGTTG+AGG + chr1_4:503896-503915 None:intergenic 40.0%
GTAATCTGCTAATTCGGCAT+TGG + chr1_4:504094-504113 None:intergenic 40.0%
ACAATGGTTATTCGTCCCTA+TGG - chr1_4:504129-504148 Msa0141770:CDS 40.0%
AATGTCAAGTTCAAGGAGAC+TGG - chr1_4:504279-504298 Msa0141770:intron 40.0%
! CTGCAATTTGTTTGCATAGG+AGG - chr1_4:504368-504387 Msa0141770:CDS 40.0%
CTGCTTGTAAAAACAGGGTA+AGG - chr1_4:504767-504786 Msa0141770:intron 40.0%
CGTACAATACACCAAATGGT+GGG - chr1_4:504793-504812 Msa0141770:intron 40.0%
ACAGTACAAGATATAGGCAC+AGG + chr1_4:505108-505127 None:intergenic 40.0%
TGCAGAACAGATTTGAGAGA+AGG + chr1_4:505234-505253 None:intergenic 40.0%
GAAAGAAGCAAGTCATGTTG+AGG - chr1_4:505278-505297 Msa0141770:CDS 40.0%
ATTGTCACTACTGCTAACTC+TGG + chr1_4:505312-505331 None:intergenic 40.0%
GAGTTAGCAGTAGTGACAAT+TGG - chr1_4:505312-505331 Msa0141770:intron 40.0%
GTTAGCAGTAGTGACAATTG+GGG - chr1_4:505314-505333 Msa0141770:intron 40.0%
TTAGCAGTAGTGACAATTGG+GGG - chr1_4:505315-505334 Msa0141770:intron 40.0%
CAATGGTTTCACTTGTAGGT+CGG + chr1_4:505536-505555 None:intergenic 40.0%
TAATCAGGTAAACGATGTCC+TGG - chr1_4:505611-505630 Msa0141770:intron 40.0%
AGCTGCCATACCTGTTATTA+CGG - chr1_4:505963-505982 Msa0141770:intron 40.0%
! GATTTTCGACCCGTAATAAC+AGG + chr1_4:505976-505995 None:intergenic 40.0%
TACGGGTCGAAAATCTAAAG+TGG - chr1_4:505981-506000 Msa0141770:intron 40.0%
TTGTAAGACCTACACGATTG+AGG - chr1_4:506020-506039 Msa0141770:intron 40.0%
TACACGATTGAGGCAATGAT+GGG - chr1_4:506030-506049 Msa0141770:intron 40.0%
AATGCTACATTAGCTGCAAC+CGG + chr1_4:506393-506412 None:intergenic 40.0%
CAGCTAATGTAGCATTAAGG+AGG - chr1_4:506397-506416 Msa0141770:intron 40.0%
GAAGGATTGTTGTGTAAGTG+TGG + chr1_4:506493-506512 None:intergenic 40.0%
! CAAGTGATAGTAGGACTAGT+TGG + chr1_4:506530-506549 None:intergenic 40.0%
CTGTGTCATGTATTAAGGGA+CGG - chr1_4:506821-506840 Msa0141770:intron 40.0%
ATGGCACAATCAATATGGCT+TGG + chr1_4:506944-506963 None:intergenic 40.0%
! GCACTCATGTTTCTATAGCT+TGG + chr1_4:506996-507015 None:intergenic 40.0%
GTGCAGTTCACAGATGAAAA+TGG - chr1_4:507209-507228 Msa0141770:intron 40.0%
!! GTTAGTACTCGTTTTGTTGG+AGG - chr1_4:507266-507285 Msa0141770:intron 40.0%
!!! TTTTGTTGGAGGCATCATCA+TGG - chr1_4:507277-507296 Msa0141770:intron 40.0%
!! CAATCTTTGGAGGAAGCATT+AGG + chr1_4:507322-507341 None:intergenic 40.0%
AAGAATATGGGACAGAGTGT+TGG - chr1_4:507476-507495 Msa0141770:intron 40.0%
! AGAATATGGGACAGAGTGTT+GGG - chr1_4:507477-507496 Msa0141770:intron 40.0%
CGAGCATAAAATAAGCGTAG+AGG - chr1_4:507516-507535 Msa0141770:intron 40.0%
AAATAAGCGTAGAGGAGATG+AGG - chr1_4:507524-507543 Msa0141770:intron 40.0%
TGTGGTAAGACTAGCAAGAT+AGG - chr1_4:507562-507581 Msa0141770:intron 40.0%
GACAACATTAGAGAGAGACT+TGG - chr1_4:507594-507613 Msa0141770:intron 40.0%
CAACATTAGAGAGAGACTTG+GGG - chr1_4:507596-507615 Msa0141770:intron 40.0%
! TTCACCGTCTTTTCTACAAG+AGG + chr1_4:507627-507646 None:intergenic 40.0%
TAGAAAAGACGGTGAAAACC+CGG - chr1_4:507631-507650 Msa0141770:intron 40.0%
GAGGATAGTCAAATCACTAG+AGG - chr1_4:507718-507737 Msa0141770:CDS 40.0%
TTATACCACTAAGTGGTGGT+CGG + chr1_4:507855-507874 None:intergenic 40.0%
TGAATTGAGGTGAGTCCTAT+TGG + chr1_4:507940-507959 None:intergenic 40.0%
! ACAGTGAAAGCTGTCTCTTT+TGG - chr1_4:508003-508022 Msa0141770:CDS 40.0%
CACTGGATGTATTCATGCAT+CGG - chr1_4:508155-508174 Msa0141770:intron 40.0%
GTTAGAGTATATTCGGATGG+AGG - chr1_4:508192-508211 Msa0141770:intron 40.0%
TTGGATGTAGAAGTTTGGAG+TGG + chr1_4:508384-508403 None:intergenic 40.0%
CAGCATGAGCTTGTCAAAAA+TGG + chr1_4:508465-508484 None:intergenic 40.0%
GTACAATTACCACCTAAACC+AGG + chr1_4:508495-508514 None:intergenic 40.0%
AAAGAAGCTCTTCAAAGCTC+TGG - chr1_4:508571-508590 Msa0141770:intron 40.0%
TAAGAGGAACTCCCTGAAAT+TGG + chr1_4:508788-508807 None:intergenic 40.0%
TAGAATTGAAATTGGTCCCC+GGG - chr1_4:508806-508825 Msa0141770:intron 40.0%
ATATCCAGGAGAGATATTCC+TGG - chr1_4:508852-508871 Msa0141770:intron 40.0%
TATCCAGGAGAGATATTCCT+GGG - chr1_4:508853-508872 Msa0141770:intron 40.0%
! CTCTATGGAGCCTTCAATTT+TGG - chr1_4:508899-508918 Msa0141770:intron 40.0%
! TATGGAGCCTTCAATTTTGG+AGG - chr1_4:508902-508921 Msa0141770:intron 40.0%
! CGAGATACAGTCTTCTCTTT+TGG - chr1_4:508947-508966 Msa0141770:intron 40.0%
!! TACAGTCTTCTCTTTTGGAG+AGG - chr1_4:508952-508971 Msa0141770:intron 40.0%
!! ACAGTCTTCTCTTTTGGAGA+GGG - chr1_4:508953-508972 Msa0141770:intron 40.0%
!! TTGGATCTAACTGTTGGTTC+TGG - chr1_4:509035-509054 Msa0141770:intron 40.0%
! TACATAGAGTGGACTTGGTT+TGG + chr1_4:509177-509196 None:intergenic 40.0%
CAATTGGAATGAGTTCCTTG+TGG - chr1_4:509277-509296 Msa0141770:intron 40.0%
TGTCAATTTGCCTGTTTGCT+GGG + chr1_4:509347-509366 None:intergenic 40.0%
ATGTCAATTTGCCTGTTTGC+TGG + chr1_4:509348-509367 None:intergenic 40.0%
CTGCAATATCACAAGGCAAA+TGG - chr1_4:509436-509455 Msa0141770:intron 40.0%
TTTCCATTTGAACAGCCACA+AGG - chr1_4:509654-509673 Msa0141770:CDS 40.0%
TTCCATTTGAACAGCCACAA+GGG - chr1_4:509655-509674 Msa0141770:CDS 40.0%
AAAATAGCCACTTCTTCAGC+AGG + chr1_4:509708-509727 None:intergenic 40.0%
TTGGAGAAGAGTGAAAGAGG+AGG + chr1_4:503816-503835 None:intergenic 45.0%
CTTGAGAGACACCATTTGTG+TGG + chr1_4:503842-503861 None:intergenic 45.0%
!! GATTCTTCGAGTTGTCGACT+CGG + chr1_4:504005-504024 None:intergenic 45.0%
CGGACCGTAATCTGCTAATT+CGG + chr1_4:504100-504119 None:intergenic 45.0%
CGAATTAGCAGATTACGGTC+CGG - chr1_4:504098-504117 Msa0141770:CDS 45.0%
ATAACCATTGTACCGCGAAC+CGG + chr1_4:504120-504139 None:intergenic 45.0%
TCCCTATGGTTACGCCATTT+GGG - chr1_4:504143-504162 Msa0141770:CDS 45.0%
TCCCAAATGGCGTAACCATA+GGG + chr1_4:504147-504166 None:intergenic 45.0%
TTCCCAAATGGCGTAACCAT+AGG + chr1_4:504148-504167 None:intergenic 45.0%
AACCTGAATGGCTTCCCAAA+TGG + chr1_4:504160-504179 None:intergenic 45.0%
AAGCACTTGCGACACTGTTT+GGG + chr1_4:504641-504660 None:intergenic 45.0%
TAAGCACTTGCGACACTGTT+TGG + chr1_4:504642-504661 None:intergenic 45.0%
GCTGCGTACAATACACCAAA+TGG - chr1_4:504789-504808 Msa0141770:intron 45.0%
GCGTACAATACACCAAATGG+TGG - chr1_4:504792-504811 Msa0141770:intron 45.0%
CGTTGAAAAGCTGTGACCTA+AGG - chr1_4:505469-505488 Msa0141770:intron 45.0%
! TTGAATGAACGGGCTTCAGT+GGG - chr1_4:505697-505716 Msa0141770:intron 45.0%
AGTGGGCAAATGTCACAAGA+TGG - chr1_4:505714-505733 Msa0141770:intron 45.0%
GTGGGCAAATGTCACAAGAT+GGG - chr1_4:505715-505734 Msa0141770:intron 45.0%
TCCAGAAGAGGCAGAAAATG+AGG - chr1_4:505808-505827 Msa0141770:intron 45.0%
! ACCTCATTTTCTGCCTCTTC+TGG + chr1_4:505812-505831 None:intergenic 45.0%
CAAGTATTCTGCTCTGTTGC+AGG - chr1_4:505897-505916 Msa0141770:intron 45.0%
GCTGCCATACCTGTTATTAC+GGG - chr1_4:505964-505983 Msa0141770:intron 45.0%
TCGACCCGTAATAACAGGTA+TGG + chr1_4:505971-505990 None:intergenic 45.0%
CATCATTGCCTCAATCGTGT+AGG + chr1_4:506031-506050 None:intergenic 45.0%
CTACACGATTGAGGCAATGA+TGG - chr1_4:506029-506048 Msa0141770:intron 45.0%
!! GACAAGAAAGCATTGCAAGC+AGG - chr1_4:506054-506073 Msa0141770:intron 45.0%
GAAAAGTTTGGCCAAGGTTG+TGG + chr1_4:506086-506105 None:intergenic 45.0%
! TCAAAGGCACGGGAAAAGTT+TGG + chr1_4:506098-506117 None:intergenic 45.0%
AGACCTGTGTTTCAAAGGCA+CGG + chr1_4:506109-506128 None:intergenic 45.0%
GCATCAGACCTGTGTTTCAA+AGG + chr1_4:506114-506133 None:intergenic 45.0%
ATGAGTCATCTATTGCGGGA+CGG + chr1_4:506601-506620 None:intergenic 45.0%
TGTCATGTATTAAGGGACGG+AGG - chr1_4:506824-506843 Msa0141770:intron 45.0%
GTCATGTATTAAGGGACGGA+GGG - chr1_4:506825-506844 Msa0141770:intron 45.0%
GAAGTGGGGAAAACAGAATC+TGG + chr1_4:507060-507079 None:intergenic 45.0%
TATTTGGCAGACATCATGGG+CGG - chr1_4:507244-507263 Msa0141770:intron 45.0%
! GCGGTTAGTACTCGTTTTGT+TGG - chr1_4:507263-507282 Msa0141770:intron 45.0%
ATGGTACATGGAGATGATGC+TGG - chr1_4:507296-507315 Msa0141770:intron 45.0%
! TGTATCGGTGCAATCTTTGG+AGG + chr1_4:507332-507351 None:intergenic 45.0%
! TCCAAAGATTGCACCGATAC+AGG - chr1_4:507331-507350 Msa0141770:intron 45.0%
! ACCTGTATCGGTGCAATCTT+TGG + chr1_4:507335-507354 None:intergenic 45.0%
! AGATTGCACCGATACAGGTA+TGG - chr1_4:507336-507355 Msa0141770:intron 45.0%
GCATCCAACCATACCTGTAT+CGG + chr1_4:507347-507366 None:intergenic 45.0%
CAGGTATGGTTGGATGCTAT+TGG - chr1_4:507350-507369 Msa0141770:intron 45.0%
AGGATGTTGCGTTGTATGTG+TGG - chr1_4:507544-507563 Msa0141770:intron 45.0%
AGCGCCTCTTGTAGAAAAGA+CGG - chr1_4:507620-507639 Msa0141770:intron 45.0%
AAGGAGAGTAGATAAGACGG+AGG - chr1_4:507699-507718 Msa0141770:CDS 45.0%
GACCACCACTTAGTGGTATA+AGG - chr1_4:507854-507873 Msa0141770:CDS 45.0%
! AGCCTTATACCACTAAGTGG+TGG + chr1_4:507859-507878 None:intergenic 45.0%
! CCAAGCCTTATACCACTAAG+TGG + chr1_4:507862-507881 None:intergenic 45.0%
CCACTTAGTGGTATAAGGCT+TGG - chr1_4:507859-507878 Msa0141770:CDS 45.0%
GGAGGAGATTGAGAAGATGA+AGG - chr1_4:508210-508229 Msa0141770:CDS 45.0%
AGAGATATTCCTGGGAAGCA+AGG - chr1_4:508861-508880 Msa0141770:intron 45.0%
GAGATATTCCTGGGAAGCAA+GGG - chr1_4:508862-508881 Msa0141770:intron 45.0%
GGGCAATTGCATTTCGAGAT+AGG - chr1_4:508973-508992 Msa0141770:intron 45.0%
TGCACAACATGATGACCACA+AGG + chr1_4:509295-509314 None:intergenic 45.0%
! GTCAATTTGCCTGTTTGCTG+GGG + chr1_4:509346-509365 None:intergenic 45.0%
TATCACAAGGCAAATGGGCA+AGG - chr1_4:509442-509461 Msa0141770:intron 45.0%
ATCACAAGGCAAATGGGCAA+GGG - chr1_4:509443-509462 Msa0141770:intron 45.0%
AACACAACCTAGCAGACCAA+GGG + chr1_4:509470-509489 None:intergenic 45.0%
AAACACAACCTAGCAGACCA+AGG + chr1_4:509471-509490 None:intergenic 45.0%
AGGAAACTGGAGCAACTATC+AGG - chr1_4:509628-509647 Msa0141770:intron 45.0%
ATCCCTTGTGGCTGTTCAAA+TGG + chr1_4:509660-509679 None:intergenic 45.0%
TGCTTGAACCCTTAGAGCAA+AGG - chr1_4:510003-510022 Msa0141770:five_prime_UTR 45.0%
GCTTGAACCCTTAGAGCAAA+GGG - chr1_4:510004-510023 Msa0141770:five_prime_UTR 45.0%
CTTTCGTCCCTTTGCTCTAA+GGG + chr1_4:510014-510033 None:intergenic 45.0%
ACTTTCGTCCCTTTGCTCTA+AGG + chr1_4:510015-510034 None:intergenic 45.0%
!! ATATATATATTAATTAAGTT+TGG + chr1_4:504344-504363 None:intergenic 5.0%
!! TTTATTGTTATATAAATTTA+AGG - chr1_4:504744-504763 Msa0141770:intron 5.0%
!! TTTATATAACAATAAAAAAA+GGG + chr1_4:504867-504886 None:intergenic 5.0%
!! ATTTATATAACAATAAAAAA+AGG + chr1_4:504868-504887 None:intergenic 5.0%
!! CAAAAATTAATAAAAAAATT+AGG + chr1_4:509062-509081 None:intergenic 5.0%
!! ACATATTTATATAAAAATAA+AGG + chr1_4:509504-509523 None:intergenic 5.0%
!!! TTTTATATAAATATGTTATA+CGG - chr1_4:509508-509527 Msa0141770:CDS 5.0%
GAGGTAGAGAGAGTGAGATG+AGG + chr1_4:503797-503816 None:intergenic 50.0%
! AATTGCTGTTGTTGAGGGGG+AGG + chr1_4:503890-503909 None:intergenic 50.0%
!! TAGGAGTGATGACTCGGTCA+GGG + chr1_4:504032-504051 None:intergenic 50.0%
GTGACCTAGGAGTGATGACT+CGG + chr1_4:504038-504057 None:intergenic 50.0%
AGTCATCACTCCTAGGTCAC+AGG - chr1_4:504038-504057 Msa0141770:three_prime_UTR 50.0%
GCATTGAAGTCCTGTGACCT+AGG + chr1_4:504051-504070 None:intergenic 50.0%
GTCCCTATGGTTACGCCATT+TGG - chr1_4:504142-504161 Msa0141770:CDS 50.0%
!! TCTGACACTATGGGCTGGTT+TGG + chr1_4:504694-504713 None:intergenic 50.0%
TCTGATCTGACACTATGGGC+TGG + chr1_4:504699-504718 None:intergenic 50.0%
CTAAAGCTCCCTCATACGCA+GGG + chr1_4:504832-504851 None:intergenic 50.0%
ACTAAAGCTCCCTCATACGC+AGG + chr1_4:504833-504852 None:intergenic 50.0%
! ATGAGGGAGCTTTAGTGCAC+CGG - chr1_4:504837-504856 Msa0141770:CDS 50.0%
!! CGCTTGTACTTGGGTTAGTG+CGG - chr1_4:505026-505045 Msa0141770:intron 50.0%
AGTGACAATTGGGGGTGGAA+AGG - chr1_4:505323-505342 Msa0141770:intron 50.0%
GGAACTTGAAGAGAAGCTCG+TGG - chr1_4:505344-505363 Msa0141770:intron 50.0%
CCTGCCACAGCCTCAAAAAA+TGG + chr1_4:505512-505531 None:intergenic 50.0%
!!! CCATTTTTTGAGGCTGTGGC+AGG - chr1_4:505509-505528 Msa0141770:intron 50.0%
GAGGAAGATCACGGTAGCTA+TGG + chr1_4:505584-505603 None:intergenic 50.0%
CTGAAGCCCGTTCATTCAAC+AGG + chr1_4:505696-505715 None:intergenic 50.0%
! GTTGAATGAACGGGCTTCAG+TGG - chr1_4:505696-505715 Msa0141770:intron 50.0%
TGCTCATGCAACTCCAGAAG+AGG - chr1_4:505796-505815 Msa0141770:intron 50.0%
!! TTCCCGTGCCTTTGAAACAC+AGG - chr1_4:506103-506122 Msa0141770:intron 50.0%
! GACCTGTGTTTCAAAGGCAC+GGG + chr1_4:506108-506127 None:intergenic 50.0%
TGGATGCTGCAGCCACTAAA+AGG + chr1_4:507040-507059 None:intergenic 50.0%
!! GGAGGCATCATCATGGTACA+TGG - chr1_4:507284-507303 Msa0141770:intron 50.0%
! TGCACCGATACAGGTATGGT+TGG - chr1_4:507340-507359 Msa0141770:intron 50.0%
!! ATATGGGACAGAGTGTTGGG+CGG - chr1_4:507480-507499 Msa0141770:intron 50.0%
AAAACCCGGCTTAGGTGGTT+TGG - chr1_4:507645-507664 Msa0141770:intron 50.0%
AAACCCGGCTTAGGTGGTTT+GGG - chr1_4:507646-507665 Msa0141770:intron 50.0%
TGCTGTGCATTGCCTGGTTT+AGG - chr1_4:508480-508499 Msa0141770:CDS 50.0%
TGTGCATTGCCTGGTTTAGG+TGG - chr1_4:508483-508502 Msa0141770:CDS 50.0%
GACTCAGATCAAAGAACCCC+TGG - chr1_4:508613-508632 Msa0141770:intron 50.0%
CAGATCAAAGAACCCCTGGA+TGG - chr1_4:508617-508636 Msa0141770:intron 50.0%
! GTGGAAGTGTGGTGATATCC+AGG - chr1_4:508838-508857 Msa0141770:intron 50.0%
CTTCCCAGGAATATCTCTCC+TGG + chr1_4:508859-508878 None:intergenic 50.0%
AACACTTTCCCTTGCTTCCC+AGG + chr1_4:508873-508892 None:intergenic 50.0%
!! GGGAAGCAAGGGAAAGTGTT+TGG - chr1_4:508873-508892 Msa0141770:intron 50.0%
GGCATGAACATGTGTGCGAT+GGG + chr1_4:509321-509340 None:intergenic 50.0%
TGGCATGAACATGTGTGCGA+TGG + chr1_4:509322-509341 None:intergenic 50.0%
! ATTTGCCTGTTTGCTGGGGA+TGG + chr1_4:509342-509361 None:intergenic 50.0%
TCACAAGGCAAATGGGCAAG+GGG - chr1_4:509444-509463 Msa0141770:intron 50.0%
AGGAGATCCTGCTGAAGAAG+TGG - chr1_4:509698-509717 Msa0141770:CDS 50.0%
TTGTTGAGGGGGAGGAGAAG+AGG + chr1_4:503882-503901 None:intergenic 55.0%
GGCGGAGAATGATTGGGGAA+CGG + chr1_4:503918-503937 None:intergenic 55.0%
!! TGGCGGTGAAAGGTTGGTGA+CGG + chr1_4:503945-503964 None:intergenic 55.0%
! AGAAGGTGGCGGTGAAAGGT+TGG + chr1_4:503951-503970 None:intergenic 55.0%
!!! AGTGGTTTTGGCGGAGAAGG+TGG + chr1_4:503965-503984 None:intergenic 55.0%
!!! TGCAGTGGTTTTGGCGGAGA+AGG + chr1_4:503968-503987 None:intergenic 55.0%
!!! CTCTGCTGCAGTGGTTTTGG+CGG + chr1_4:503974-503993 None:intergenic 55.0%
!! CGAGTTGTCGACTCGGTCTT+TGG + chr1_4:503998-504017 None:intergenic 55.0%
!! CTAGGAGTGATGACTCGGTC+AGG + chr1_4:504033-504052 None:intergenic 55.0%
CTGACCGAGTCATCACTCCT+AGG - chr1_4:504031-504050 Msa0141770:three_prime_UTR 55.0%
GGTCACAGGACTTCAATGCG+TGG - chr1_4:504052-504071 Msa0141770:exon 55.0%
CGCCATTTGGGAAGCCATTC+AGG - chr1_4:504155-504174 Msa0141770:CDS 55.0%
! TGAGGGAGCTTTAGTGCACC+GGG - chr1_4:504838-504857 Msa0141770:CDS 55.0%
GCAGTAGTGACAATTGGGGG+TGG - chr1_4:505318-505337 Msa0141770:intron 55.0%
AGTTTGGCCAAGGTTGTGGC+TGG + chr1_4:506082-506101 None:intergenic 55.0%
GCACGGGAAAAGTTTGGCCA+AGG + chr1_4:506092-506111 None:intergenic 55.0%
GTCATCTATTGCGGGACGGA+GGG + chr1_4:506597-506616 None:intergenic 55.0%
AGTCATCTATTGCGGGACGG+AGG + chr1_4:506598-506617 None:intergenic 55.0%
GCAGCTGCATCCTCGTTGAA+AGG + chr1_4:507174-507193 None:intergenic 55.0%
AGACGGTGAAAACCCGGCTT+AGG - chr1_4:507637-507656 Msa0141770:intron 55.0%
ATGCCCAAACCACCTAAGCC+GGG + chr1_4:507652-507671 None:intergenic 55.0%
CATGCCCAAACCACCTAAGC+CGG + chr1_4:507653-507672 None:intergenic 55.0%
! GGTGGTTTGGGCATGTAGAG+AGG - chr1_4:507658-507677 Msa0141770:intron 55.0%
CTAAGTGGTGGTCGGCTACA+TGG + chr1_4:507847-507866 None:intergenic 55.0%
TGTAGCCGACCACCACTTAG+TGG - chr1_4:507847-507866 Msa0141770:CDS 55.0%
AGCTCATGCTGTGCATTGCC+TGG - chr1_4:508474-508493 Msa0141770:CDS 55.0%
ACTTCCACTAGACACGTCCC+GGG + chr1_4:508826-508845 None:intergenic 55.0%
CACTTCCACTAGACACGTCC+CGG + chr1_4:508827-508846 None:intergenic 55.0%
GGACGTGTCTAGTGGAAGTG+TGG - chr1_4:508827-508846 Msa0141770:intron 55.0%
TCATGCCATCCCCAGCAAAC+AGG - chr1_4:509334-509353 Msa0141770:intron 55.0%
!! GCGGTGGCGGAGAATGATTG+GGG + chr1_4:503923-503942 None:intergenic 60.0%
!! GGCGGTGGCGGAGAATGATT+GGG + chr1_4:503924-503943 None:intergenic 60.0%
!! TGAAAGGTTGGTGACGGCGG+TGG + chr1_4:503939-503958 None:intergenic 60.0%
!! CGGTGAAAGGTTGGTGACGG+CGG + chr1_4:503942-503961 None:intergenic 60.0%
!! GGTTTTGGCGGAGAAGGTGG+CGG + chr1_4:503962-503981 None:intergenic 60.0%
CGCCAAAACCACTGCAGCAG+AGG - chr1_4:503972-503991 Msa0141770:three_prime_UTR 60.0%
! GGCCTCTGCTGCAGTGGTTT+TGG + chr1_4:503977-503996 None:intergenic 60.0%
GTCTTTGGCCTCTGCTGCAG+TGG + chr1_4:503983-504002 None:intergenic 60.0%
! GCAGATTACGGTCCGGTTCG+CGG - chr1_4:504105-504124 Msa0141770:CDS 60.0%
! CAAATGGTGGGACCCCTTCC+CGG - chr1_4:504805-504824 Msa0141770:intron 60.0%
TCATACGCAGGGTCCGGGAA+GGG + chr1_4:504821-504840 None:intergenic 60.0%
TTCCCGGACCCTGCGTATGA+GGG - chr1_4:504821-504840 Msa0141770:CDS 60.0%
GCAGGAACCAGCCACAACCT+TGG - chr1_4:506072-506091 Msa0141770:intron 60.0%
CGGTGAAAACCCGGCTTAGG+TGG - chr1_4:507640-507659 Msa0141770:intron 60.0%
CTTCCACTAGACACGTCCCG+GGG + chr1_4:508825-508844 None:intergenic 60.0%
!! CGGCGGTGGCGGAGAATGAT+TGG + chr1_4:503925-503944 None:intergenic 65.0%
!! AAGGTTGGTGACGGCGGTGG+CGG + chr1_4:503936-503955 None:intergenic 65.0%
! GCGGAGAAGGTGGCGGTGAA+AGG + chr1_4:503955-503974 None:intergenic 65.0%
! CGGTCCGGTTCGCGGTACAA+TGG - chr1_4:504113-504132 Msa0141770:CDS 65.0%
CGGGAAGGGGTCCCACCATT+TGG + chr1_4:504807-504826 None:intergenic 65.0%
CATACGCAGGGTCCGGGAAG+GGG + chr1_4:504820-504839 None:intergenic 65.0%
CTCATACGCAGGGTCCGGGA+AGG + chr1_4:504822-504841 None:intergenic 65.0%
CTTCCCGGACCCTGCGTATG+AGG - chr1_4:504820-504839 Msa0141770:CDS 65.0%
CTCCCTCATACGCAGGGTCC+GGG + chr1_4:504826-504845 None:intergenic 65.0%
GCTCCCTCATACGCAGGGTC+CGG + chr1_4:504827-504846 None:intergenic 65.0%
GCAAATGGGCAAGGGGCCCT+TGG - chr1_4:509451-509470 Msa0141770:intron 65.0%
CAAGGGGCCCTTGGTCTGCT+AGG - chr1_4:509460-509479 Msa0141770:intron 65.0%
GGTCCCCGGGACGTGTCTAG+TGG - chr1_4:508819-508838 Msa0141770:intron 70.0%
Chromosome Type Strat End Strand Name
chr1_4 gene 503776 510035 503776 ID=Msa0141770;Name=Msa0141770
chr1_4 mRNA 503776 510035 503776 ID=Msa0141770-mRNA-1;Parent=Msa0141770;Name=Msa0141770-mRNA-1;_AED=0.09;_eAED=0.09;_QI=71|0.9|0.90|1|1|1|11|292|551
chr1_4 exon 503776 504209 503776 ID=Msa0141770-mRNA-1:exon:103;Parent=Msa0141770-mRNA-1
chr1_4 exon 504330 504413 504330 ID=Msa0141770-mRNA-1:exon:102;Parent=Msa0141770-mRNA-1
chr1_4 exon 504817 505016 504817 ID=Msa0141770-mRNA-1:exon:101;Parent=Msa0141770-mRNA-1
chr1_4 exon 505148 505309 505148 ID=Msa0141770-mRNA-1:exon:100;Parent=Msa0141770-mRNA-1
chr1_4 exon 506459 506621 506459 ID=Msa0141770-mRNA-1:exon:99;Parent=Msa0141770-mRNA-1
chr1_4 exon 507687 507892 507687 ID=Msa0141770-mRNA-1:exon:98;Parent=Msa0141770-mRNA-1
chr1_4 exon 507982 508095 507982 ID=Msa0141770-mRNA-1:exon:97;Parent=Msa0141770-mRNA-1
chr1_4 exon 508194 508280 508194 ID=Msa0141770-mRNA-1:exon:96;Parent=Msa0141770-mRNA-1
chr1_4 exon 508446 508556 508446 ID=Msa0141770-mRNA-1:exon:95;Parent=Msa0141770-mRNA-1
chr1_4 exon 509485 509541 509485 ID=Msa0141770-mRNA-1:exon:94;Parent=Msa0141770-mRNA-1
chr1_4 exon 509635 510035 509635 ID=Msa0141770-mRNA-1:exon:93;Parent=Msa0141770-mRNA-1
chr1_4 five_prime_UTR 509965 510035 509965 ID=Msa0141770-mRNA-1:five_prime_utr;Parent=Msa0141770-mRNA-1
chr1_4 CDS 509635 509964 509635 ID=Msa0141770-mRNA-1:cds;Parent=Msa0141770-mRNA-1
chr1_4 CDS 509485 509541 509485 ID=Msa0141770-mRNA-1:cds;Parent=Msa0141770-mRNA-1
chr1_4 CDS 508446 508556 508446 ID=Msa0141770-mRNA-1:cds;Parent=Msa0141770-mRNA-1
chr1_4 CDS 508194 508280 508194 ID=Msa0141770-mRNA-1:cds;Parent=Msa0141770-mRNA-1
chr1_4 CDS 507982 508095 507982 ID=Msa0141770-mRNA-1:cds;Parent=Msa0141770-mRNA-1
chr1_4 CDS 507687 507892 507687 ID=Msa0141770-mRNA-1:cds;Parent=Msa0141770-mRNA-1
chr1_4 CDS 506459 506621 506459 ID=Msa0141770-mRNA-1:cds;Parent=Msa0141770-mRNA-1
chr1_4 CDS 505148 505309 505148 ID=Msa0141770-mRNA-1:cds;Parent=Msa0141770-mRNA-1
chr1_4 CDS 504817 505016 504817 ID=Msa0141770-mRNA-1:cds;Parent=Msa0141770-mRNA-1
chr1_4 CDS 504330 504413 504330 ID=Msa0141770-mRNA-1:cds;Parent=Msa0141770-mRNA-1
chr1_4 CDS 504068 504209 504068 ID=Msa0141770-mRNA-1:cds;Parent=Msa0141770-mRNA-1
chr1_4 three_prime_UTR 503776 504067 503776 ID=Msa0141770-mRNA-1:three_prime_utr;Parent=Msa0141770-mRNA-1
Gene Sequence

>Msa0141770

ATGGTGTCTCTCAAGCTATCTTCTTTCACTCACCTCTTCTCCTCCCCCTCAACAACAGCAATTTCTCACCGTTCCCCAATCATTCTCCGCCACCGCCGTCACCAACCTTTCACCGCCACCTTCTCCGCCAAAACCACTGCAGCAGAGGCCAAAGACCGAGTCGACAACTCGAAGAATCGCGTCCCTGACCGAGTCATCACTCCTAGGTCACAGGACTTCAATGCGTGGTATCTCGATATCATAGCCAATGCCGAATTAGCAGATTACGGTCCGGTTCGCGGTACAATGGTTATTCGTCCCTATGGTTACGCCATTTGGGAAGCCATTCAGGATTATTTGAATGTCAAGTTCAAGGAGACTGGACATAGTAACATGTATTTTCCACAGTTTATTCCTTACTCCTTTATAGAGAAAGAAGCAAGTCATGTTGAGGGTTTCAGTCCAGAGTTAGCAGTAGTGACAATTGGGGGTGGAAAGGAACTTGAAGAGAAGCTCGTGGTCCGACCTACAAGTGAAACCATTGTGAATCACATGTTTACTCAGTGGATCCATAGCTACCGTGATCTTCCTCTCTTGATTAATCAGTGGGCAAATGTCACAAGATGGGAGATGCGCACTAAACCATTTGTTAGAACTCTTGAATTTCTTTGGCAAGAAGGTCATACTGCTCATGCAACTCCAGAAGAGGCAGAAAATGAGGCTAAACAAATGATTGACATCTATACCAGATTTGCTTTTGAACAAGCTGCCATACCTGTTATTACGGGTCGAAAATCTAAAGTGGAAACATTTGCTGGTGCTTGTAAGACCTACACGATTGAGGCAATGATGGGTGACAAGAAAGCATTGCAAGCAGGAACCAGCCACAACCTTGGCCAAACTTTTCCCGTGCCTTTGAAACACAGCTGCTCAAAATGTATGCTTGTGCAGTTCACAGATGAAAATGGACAAAGGGAATATATTTGGCAGACATCATGGGCGGTTAGTACTCGTTTTGTTGGAGGCATCATCATGGTACATGGAGATGATGCTGGCCTAATGCTTCCTCCAAAGATTGCACCGATACAGGTGGTAATTGTACCAATTTGGAAGAAGGATGATGAAAAAATGGAAGTTCTTAGTGCAGCATTGTCTGTAAAAGAAGCTCTTCAAAGCTCTGGCGTTAAAGTAAAACTTGATGACTCAGATCAAAGAACCCCTGGATGGAAATTCAATTTCTGGGAAATGAAGGGAGTTCCTCTTAGAATTGAAATTGGTCCCCGGGACGTGTCTAGTGGAAGTGTGGTGATATCCAGGAGAGATATTCCTGGGAAGCAAGGGAAAGTGTTTGGAATCTCTATGGAGCCTTCAATTTTGGAGGTGTATGTTAAAGACAAGTTGGACGAGATACAGTCTTCTCTTTTGGAGAGGGCAATTGCATTTCGAGATAGTAATATTGTAGATGTGAGCACATACGAAGATCTTAAATCTGCAATATCACAAGGCAAATGGGCAAGGGGCCCTTGGTCTGCTAGCGATGAAGATGAGTTAAAAGTGAAAGAGGAAACTGGAGCAACTATCAGGTGTTTTCCATTTGAACAGCCACAAGGGATTAAAAGATGTTTGATGACAGGAGATCCTGCTGAAGAAGTGGCTATTTTTGCCAAATCTTACTAA

Protein sequence

>Msa0141770

MVSLKLSSFTHLFSSPSTTAISHRSPIILRHRRHQPFTATFSAKTTAAEAKDRVDNSKNRVPDRVITPRSQDFNAWYLDIIANAELADYGPVRGTMVIRPYGYAIWEAIQDYLNVKFKETGHSNMYFPQFIPYSFIEKEASHVEGFSPELAVVTIGGGKELEEKLVVRPTSETIVNHMFTQWIHSYRDLPLLINQWANVTRWEMRTKPFVRTLEFLWQEGHTAHATPEEAENEAKQMIDIYTRFAFEQAAIPVITGRKSKVETFAGACKTYTIEAMMGDKKALQAGTSHNLGQTFPVPLKHSCSKCMLVQFTDENGQREYIWQTSWAVSTRFVGGIIMVHGDDAGLMLPPKIAPIQVVIVPIWKKDDEKMEVLSAALSVKEALQSSGVKVKLDDSDQRTPGWKFNFWEMKGVPLRIEIGPRDVSSGSVVISRRDIPGKQGKVFGISMEPSILEVYVKDKLDEIQSSLLERAIAFRDSNIVDVSTYEDLKSAISQGKWARGPWSASDEDELKVKEETGATIRCFPFEQPQGIKRCLMTGDPAEEVAIFAKSY*