AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa1418310

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa1418310 MtrunA17_Chr7g0276251 96.822 535 9 2 1 528 1 534 0.0 1061
Msa1418310 MtrunA17_Chr1g0188051 63.473 501 166 6 30 523 17 507 0.0 649
Msa1418310 MtrunA17_Chr4g0063011 63.600 500 165 4 31 523 6 495 0.0 645
Msa1418310 MtrunA17_Chr1g0166191 63.745 502 163 6 30 523 23 513 0.0 639
Msa1418310 MtrunA17_Chr4g0035081 59.127 504 186 6 27 522 11 502 0.0 606
Msa1418310 MtrunA17_Chr1g0209881 56.313 499 198 7 33 523 5 491 0.0 566
Msa1418310 MtrunA17_Chr5g0423521 55.578 502 197 7 33 523 5 491 0.0 552
Msa1418310 MtrunA17_Chr2g0306781 72.654 373 91 3 158 523 32 400 0.0 551
Msa1418310 MtrunA17_Chr3g0136561 54.565 471 192 5 72 522 435 903 0.0 540
Msa1418310 MtrunA17_Chr6g0480561 55.220 431 176 5 100 522 47 468 1.59e-171 493
Msa1418310 MtrunA17_Chr7g0276241 73.883 291 62 2 237 520 1 284 1.02e-161 461
Msa1418310 MtrunA17_Chr2g0282281 47.976 494 228 6 27 511 27 500 2.21e-157 458
Msa1418310 MtrunA17_Chr7g0250661 73.129 294 68 3 237 523 1 290 8.74e-157 448
Msa1418310 MtrunA17_Chr2g0277841 50.361 415 192 5 118 524 45 453 5.09e-146 427
Msa1418310 MtrunA17_Chr2g0295781 47.086 429 209 5 105 522 30 451 5.01e-140 412
Msa1418310 MtrunA17_Chr1g0204301 44.743 409 218 3 118 520 78 484 4.97e-126 377
Msa1418310 MtrunA17_Chr3g0115041 44.125 417 220 5 114 522 74 485 8.35e-122 366
Msa1418310 MtrunA17_Chr3g0115021 44.125 417 220 5 114 522 74 485 9.01e-122 366
Msa1418310 MtrunA17_Chr4g0030601 42.290 428 224 8 106 519 15 433 2.34e-115 349
Msa1418310 MtrunA17_Chr2g0327721 41.463 451 233 7 105 528 4 450 4.97e-115 348
Msa1418310 MtrunA17_Chr6g0469631 44.499 409 214 5 121 521 80 483 1.97e-113 345
Msa1418310 MtrunA17_Chr4g0030581 41.609 435 225 6 106 519 15 441 1.23e-112 342
Msa1418310 MtrunA17_Chr1g0212951 39.318 440 235 5 107 519 17 451 2.34e-111 339
Msa1418310 MtrunA17_Chr4g0030591 41.055 436 227 7 106 519 15 442 7.98e-111 338
Msa1418310 MtrunA17_Chr6g0461631 58.238 261 98 3 272 525 3 259 2.31e-106 318
Msa1418310 MtrunA17_Chr4g0026871 60.944 233 79 4 300 524 1 229 4.11e-95 288
Msa1418310 MtrunA17_Chr4g0026791 64.088 181 62 2 300 479 1 179 7.98e-77 239
Msa1418310 MtrunA17_Chr4g0026721 55.152 165 63 3 367 524 1 161 5.81e-57 187
Msa1418310 MtrunA17_Chr4g0026861 50.000 166 83 0 109 274 49 214 1.31e-54 183
Msa1418310 MtrunA17_Chr6g0461621 50.000 164 80 1 113 274 56 219 5.88e-47 163
Msa1418310 MtrunA17_Chr7g0250651 44.571 175 91 3 31 205 17 185 1.06e-37 137
Msa1418310 MtrunA17_Chr4g0026801 40.708 113 67 0 107 219 47 159 6.52e-24 98.2
Msa1418310 MtrunA17_Chr7g0276231 43.396 106 57 2 70 173 3 107 1.73e-15 72.8
Msa1418310 MtrunA17_Chr4g0040421 26.296 270 163 10 206 472 120 356 4.30e-11 64.7
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa1418310 AT1G01120.1 71.780 528 134 6 4 522 5 526 0.0 776
Msa1418310 AT2G26640.1 63.419 503 161 6 31 523 15 504 0.0 649
Msa1418310 AT1G04220.1 62.451 506 168 8 31 523 20 516 0.0 636
Msa1418310 AT1G19440.1 58.929 504 187 6 27 522 23 514 0.0 602
Msa1418310 AT5G43760.1 61.895 496 170 6 39 523 34 521 0.0 601
Msa1418310 AT2G16280.1 58.893 506 178 10 30 522 22 510 0.0 591
Msa1418310 AT2G26250.1 53.422 526 203 8 27 520 33 548 0.0 565
Msa1418310 AT1G68530.1 54.509 499 207 6 33 523 6 492 0.0 555
Msa1418310 AT2G46720.1 60.514 428 160 2 102 522 40 465 0.0 553
Msa1418310 AT4G34510.1 56.452 496 188 9 37 522 8 485 0.0 552
Msa1418310 AT1G25450.1 54.418 498 209 6 33 523 1 487 0.0 545
Msa1418310 AT3G10280.1 59.346 428 158 3 102 522 40 458 0.0 534
Msa1418310 AT2G15090.1 50.312 481 219 4 59 524 6 481 2.97e-173 498
Msa1418310 AT4G34250.1 54.875 441 176 6 104 526 56 491 3.80e-171 493
Msa1418310 AT4G34520.1 55.204 442 170 7 104 522 54 490 4.48e-170 491
Msa1418310 AT1G71160.1 48.611 432 207 4 104 527 29 453 1.62e-148 434
Msa1418310 AT5G49070.1 45.077 457 235 5 82 525 5 458 9.69e-139 409
Msa1418310 AT3G52160.1 43.932 412 189 4 108 512 74 450 1.62e-122 367
Msa1418310 AT1G68530.2 47.849 372 178 5 33 399 6 366 1.05e-120 360
Msa1418310 AT3G52160.2 45.946 370 158 4 150 512 3 337 1.22e-113 340
Msa1418310 AT2G28630.2 41.026 429 233 6 110 519 19 446 1.73e-112 342
Msa1418310 AT2G28630.1 41.026 429 233 6 110 519 19 446 1.73e-112 342
Msa1418310 AT5G04530.1 40.654 428 232 7 107 519 17 437 4.19e-111 338
Msa1418310 AT1G07720.1 41.822 428 220 7 116 519 25 447 1.36e-108 332
Msa1418310 AT1G07720.2 41.822 428 220 7 116 519 68 490 1.47e-108 333
Msa1418310 AT5G49070.2 41.748 309 174 3 82 384 5 313 1.91e-81 257

Find 127 sgRNAs with CRISPR-Local

Find 304 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
TCCCTGTCTCGTCTTCTTTC+TGG 0.110532 tig0024576:-21777 None:intergenic
TCTTGTCATCAGCTCCTTTA+TGG 0.143442 tig0024576:-21738 None:intergenic
TGTATGAACCAGCTTGTATT+TGG 0.221689 tig0024576:-21707 None:intergenic
AAGACCACCGCGTAGGAATT+TGG 0.226830 tig0024576:-21556 None:intergenic
TTCATTGGCTAGAGAATTAA+TGG 0.254813 tig0024576:+21810 Msa1418310:CDS
AACATGAACTGTTCAGAAAA+TGG 0.259600 tig0024576:-21889 None:intergenic
GGTTAGATCAGAGGACTTAT+TGG 0.265749 tig0024576:-21680 None:intergenic
CAAAATCCGACGACGTTTAC+CGG 0.274993 tig0024576:+20811 Msa1418310:CDS
CTTGTCATCAGCTCCTTTAT+GGG 0.289862 tig0024576:-21737 None:intergenic
AATTTGAAATCTGGTATATA+AGG 0.292144 tig0024576:-21964 None:intergenic
ATTTGCTTTCAAAAGATCTT+TGG 0.295644 tig0024576:-21533 None:intergenic
GCAAAATCCACCAGGTAAAT+TGG 0.298744 tig0024576:-21091 None:intergenic
GGGATTGGCGGGGCAACCCC+TGG 0.302657 tig0024576:+22308 Msa1418310:CDS
GAAGCAGAAGCTGTAATGTT+TGG 0.314657 tig0024576:+21313 Msa1418310:CDS
TCAAAAGCTAATTTGAAATC+TGG 0.331655 tig0024576:-21973 None:intergenic
CGGGTCTGGCAGATTGCATT+CGG 0.336102 tig0024576:+22180 Msa1418310:CDS
TTGCAAAAGGGGATCGGGTC+TGG 0.336451 tig0024576:+22166 Msa1418310:CDS
GCCCGTCGTCGGGGATTGGC+GGG 0.352548 tig0024576:+22297 Msa1418310:CDS
TTAACCCTCAATTGGTACTT+TGG 0.358565 tig0024576:+21592 Msa1418310:CDS
GGACTTGACATTATTCCATT+TGG 0.369284 tig0024576:-21259 None:intergenic
CGGATGACTCTGCATAGATT+TGG 0.389216 tig0024576:+22084 Msa1418310:CDS
GCTTCTTTCATGCATAGATT+TGG 0.389782 tig0024576:-21283 None:intergenic
GCAAAGGGCCGGGTTGCAAA+AGG 0.390952 tig0024576:+22153 Msa1418310:CDS
AGAGAATTAATGGCTGTTGC+AGG 0.392253 tig0024576:+21820 Msa1418310:CDS
GTTAAAATGTTAGAAGATAG+TGG 0.394444 tig0024576:+21160 Msa1418310:CDS
AGGGAAAGTTGGTGTTTCAT+TGG 0.396299 tig0024576:+21795 Msa1418310:CDS
ACACTTCAAGCAGTTCTCTA+TGG 0.396346 tig0024576:+22109 Msa1418310:CDS
AAGCTATAATCTCGGAGGTA+TGG 0.411775 tig0024576:+21477 Msa1418310:CDS
AAAACAAACATAACAACGTT+GGG 0.411988 tig0024576:+21853 Msa1418310:CDS
TTAGAAGATAGTGGCGAATT+CGG 0.414252 tig0024576:+21169 Msa1418310:CDS
AAACTCAAGTACGTAAAGTT+AGG 0.423051 tig0024576:+20851 Msa1418310:CDS
CATAACAACGTTGGGTCCAT+TGG 0.424394 tig0024576:+21861 Msa1418310:CDS
CCAACTCAGTGAGTGGCATA+TGG 0.428746 tig0024576:+22053 Msa1418310:CDS
GGAGGTATGGGTTGTAGTGC+TGG 0.432856 tig0024576:+21490 Msa1418310:CDS
CGGAGAATTTAACCCTCAAT+TGG 0.433036 tig0024576:+21584 Msa1418310:CDS
ATTGTTCTACTCTTCCTCTT+CGG 0.433972 tig0024576:+21043 Msa1418310:CDS
CCGGGTTGCAAAAGGGGATC+GGG 0.444082 tig0024576:+22161 Msa1418310:CDS
GCCGGGTTGCAAAAGGGGAT+CGG 0.445235 tig0024576:+22160 Msa1418310:CDS
AAGTTGCTGAAGAAAGGTTC+AGG 0.449295 tig0024576:+21934 Msa1418310:CDS
CAGTTCTCTATGGTATGAAC+TGG 0.451448 tig0024576:+22119 Msa1418310:CDS
CATACAGTTAGAACCCATAA+AGG 0.451862 tig0024576:+21724 Msa1418310:CDS
AAAAGGAAGTTGCTGAAGAA+AGG 0.452076 tig0024576:+21928 Msa1418310:CDS
CAAAGGGCCGGGTTGCAAAA+GGG 0.466708 tig0024576:+22154 Msa1418310:CDS
ACAAGAATGTCAATGTCTCT+TGG 0.469200 tig0024576:-21373 None:intergenic
GTATAGCGGCGCCACCCATT+CGG 0.470845 tig0024576:-21651 None:intergenic
TCTTTCATGCATAGATTTGG+TGG 0.474801 tig0024576:-21280 None:intergenic
TTGCAGAAAGTGAAGGAGTT+GGG 0.476301 tig0024576:-21417 None:intergenic
CATTTCCAAAGTACCAATTG+AGG 0.478571 tig0024576:-21597 None:intergenic
GGATTGGCGGGGCAACCCCT+GGG 0.483271 tig0024576:+22309 Msa1418310:CDS
TGCCCGTCGTCGGGGATTGG+CGG 0.485832 tig0024576:+22296 Msa1418310:CDS
AGCTATAATCTCGGAGGTAT+GGG 0.488082 tig0024576:+21478 Msa1418310:CDS
GAACCAGCTTGTATTTGGAC+CGG 0.488419 tig0024576:-21702 None:intergenic
AAGTACGTAAAGTTAGGTTA+TGG 0.495016 tig0024576:+20857 Msa1418310:CDS
GAACATTTCTGTATTCATGC+TGG 0.495485 tig0024576:+21994 Msa1418310:CDS
GGGTCTGGCAGATTGCATTC+GGG 0.495898 tig0024576:+22181 Msa1418310:CDS
CCCCGCCAATCCCCGACGAC+GGG 0.497979 tig0024576:-22298 None:intergenic
TTCACCGTCTGTAGAAAATC+CGG 0.498288 tig0024576:-20830 None:intergenic
AAAGGGCCGGGTTGCAAAAG+GGG 0.505317 tig0024576:+22155 Msa1418310:CDS
ATTTCCAAAGTACCAATTGA+GGG 0.506557 tig0024576:-21596 None:intergenic
AATTGAACCGATGGCTGTAT+CGG 0.514947 tig0024576:-21023 None:intergenic
GACGAAACTTCCTTGCCAAA+TGG 0.515853 tig0024576:+21244 Msa1418310:CDS
TTATACTGAGGCAAAGGGCC+GGG 0.516750 tig0024576:+22143 Msa1418310:CDS
GAAAACAAACATAACAACGT+TGG 0.519196 tig0024576:+21852 Msa1418310:CDS
TGTTTGTTCTTAGCTTGTAG+TGG 0.521220 tig0024576:-21450 None:intergenic
ACAGAAACAGGGACGCTGAC+GGG 0.521485 tig0024576:-22352 None:intergenic
AACATTAAAAGCTATAATCT+CGG 0.522267 tig0024576:+21469 Msa1418310:CDS
CTTATACTGAGGCAAAGGGC+CGG 0.522593 tig0024576:+22142 Msa1418310:CDS
CCCGTCGTCGGGGATTGGCG+GGG 0.523629 tig0024576:+22298 Msa1418310:CDS
TACCAGAAAGAAGACGAGAC+AGG 0.524700 tig0024576:+21775 Msa1418310:CDS
AATCCACCAGGTAAATTGGT+GGG 0.541242 tig0024576:-21087 None:intergenic
ATTGCAGAAAGTGAAGGAGT+TGG 0.552174 tig0024576:-21418 None:intergenic
GAAGACGAGACAGGGAAAGT+TGG 0.555142 tig0024576:+21784 Msa1418310:CDS
TCAGAAAATGGCAAAACCAA+TGG 0.557047 tig0024576:-21877 None:intergenic
ACGATCCCCACCAATTTACC+TGG 0.560276 tig0024576:+21081 Msa1418310:CDS
CCATATGCCACTCACTGAGT+TGG 0.569030 tig0024576:-22053 None:intergenic
GCAAGAGTTGTGAGAGACGG+TGG 0.571620 tig0024576:-20976 None:intergenic
TGGCTGTATCGGTGTCAAGT+TGG 0.573119 tig0024576:-21012 None:intergenic
ACTGGCTTATACTGAGGCAA+AGG 0.574125 tig0024576:+22137 Msa1418310:CDS
CTTATCAACAGAGTCATCCC+AGG 0.582184 tig0024576:-22326 None:intergenic
ATCCACCAGGTAAATTGGTG+GGG 0.585932 tig0024576:-21086 None:intergenic
AACCCGGTCCAAATACAAGC+TGG 0.586438 tig0024576:+21699 Msa1418310:CDS
TGACATTATTCCATTTGGCA+AGG 0.590067 tig0024576:-21254 None:intergenic
CTGGCTTATACTGAGGCAAA+GGG 0.590480 tig0024576:+22138 Msa1418310:CDS
CATTTCTGTATTCATGCTGG+TGG 0.590993 tig0024576:+21997 Msa1418310:CDS
AACAGAAACAGGGACGCTGA+CGG 0.594758 tig0024576:-22353 None:intergenic
AACCAGCTTGTATTTGGACC+GGG 0.596597 tig0024576:-21701 None:intergenic
GAGTAGAACAATTGAACCGA+TGG 0.597177 tig0024576:-21032 None:intergenic
AAATCCACCAGGTAAATTGG+TGG 0.601519 tig0024576:-21088 None:intergenic
AACCTGCTCTTGACAAAATG+CGG 0.602486 tig0024576:-21216 None:intergenic
GTATGAACTGGCTTATACTG+AGG 0.604352 tig0024576:+22131 Msa1418310:CDS
TGTGAAAATGAGAATGGTTG+TGG 0.605218 tig0024576:-20894 None:intergenic
ATCCCCACCAATTTACCTGG+TGG 0.607799 tig0024576:+21084 Msa1418310:CDS
ATCGGTGAGTTGGAACTGAA+CGG 0.608509 tig0024576:-20945 None:intergenic
ACAATCATTGCAGAAAGTGA+AGG 0.609013 tig0024576:-21424 None:intergenic
ACCAGAAAGAAGACGAGACA+GGG 0.610150 tig0024576:+21776 Msa1418310:CDS
GTGTAACAGTGCTGTGTGGA+AGG 0.610162 tig0024576:+22261 Msa1418310:intron
TTTGGACCGGGTTAGATCAG+AGG 0.612315 tig0024576:-21689 None:intergenic
TTTAAGAAGCAACAGAAACA+GGG 0.614888 tig0024576:-22363 None:intergenic
CGGTGAGGAAGAGTAAGAGA+GGG 0.614974 tig0024576:-20925 None:intergenic
GCGCGACTTGCCCGTCGTCG+GGG 0.623964 tig0024576:+22288 Msa1418310:CDS
ATAAGTCCTCTGATCTAACC+CGG 0.625331 tig0024576:+21683 Msa1418310:CDS
CGAGCAAGAGTTGTGAGAGA+CGG 0.627180 tig0024576:-20979 None:intergenic
GACGAGTGTGAAAATGAGAA+TGG 0.628164 tig0024576:-20900 None:intergenic
ACGGTGAGGAAGAGTAAGAG+AGG 0.633167 tig0024576:-20926 None:intergenic
CTACGCGGTGGTCTTGAGCA+CGG 0.635511 tig0024576:+21564 Msa1418310:CDS
GAAAATCCGGTAAACGTCGT+CGG 0.635960 tig0024576:-20817 None:intergenic
GCTACAAACCGGAGAAAGAG+CGG 0.638965 tig0024576:+21116 Msa1418310:CDS
AGTGGCATATGGAACCGTCT+CGG 0.641136 tig0024576:+22064 Msa1418310:CDS
TGTAGCACGCAAAATCCACC+AGG 0.643428 tig0024576:-21099 None:intergenic
CTTGACACCGATACAGCCAT+CGG 0.644102 tig0024576:+21016 Msa1418310:CDS
GGGTCGCAACAGCATAGACA+TGG 0.648812 tig0024576:+20733 Msa1418310:CDS
TTATCAACAGAGTCATCCCA+GGG 0.649243 tig0024576:-22325 None:intergenic
AGAATCTCCAACTCAGTGAG+TGG 0.655119 tig0024576:+22046 Msa1418310:CDS
TGTATCGGTGTCAAGTTGGA+CGG 0.658526 tig0024576:-21008 None:intergenic
CTATGCAGAGTCATCCGAGA+CGG 0.659543 tig0024576:-22078 None:intergenic
CTTATTGGAAAGAAGTATAG+CGG 0.661996 tig0024576:-21665 None:intergenic
CATGGATAAAGAAAGACTAA+CGG 0.662335 tig0024576:+20751 Msa1418310:CDS
AAATCCAAATTCCTACGCGG+TGG 0.667104 tig0024576:+21552 Msa1418310:CDS
GAAAGAGCGGAAAATAGCAG+TGG 0.668978 tig0024576:+21129 Msa1418310:CDS
ATTAAAAGCTATAATCTCGG+AGG 0.675727 tig0024576:+21472 Msa1418310:CDS
TCGCGTAGTACAGACCGAAG+AGG 0.689821 tig0024576:-21057 None:intergenic
TTTCAAAGATTCAACCTCCG+CGG 0.705846 tig0024576:+20784 Msa1418310:CDS
TGAGTTGGAACTGAACGGTG+AGG 0.720930 tig0024576:-20940 None:intergenic
TTAAGTGTAACAGTGCTGTG+TGG 0.723760 tig0024576:+22257 Msa1418310:intron
GGATAAAGAAAGACTAACGG+CGG 0.724763 tig0024576:+20754 Msa1418310:CDS
AGCAAATCCAAATTCCTACG+CGG 0.758527 tig0024576:+21549 Msa1418310:CDS
TATCAACAGAGTCATCCCAG+GGG 0.818112 tig0024576:-22324 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! AACATTAAAAGCTATAATCT+CGG + tig0024576:21469-21488 Msa1418310:CDS 20.0%
!!! AATTTGAAATCTGGTATATA+AGG - tig0024576:21967-21986 None:intergenic 20.0%
!!! TTTTGGGATAATAGTAATTT+TGG + tig0024576:22232-22251 Msa1418310:intron 20.0%
!! AACATTAAAAGCTATAATCT+CGG + tig0024576:21469-21488 Msa1418310:CDS 20.0%
!!! AATTTGAAATCTGGTATATA+AGG - tig0024576:21967-21986 None:intergenic 20.0%
!!! TTTTGGGATAATAGTAATTT+TGG + tig0024576:22232-22251 Msa1418310:intron 20.0%
! GTTAAAATGTTAGAAGATAG+TGG + tig0024576:21160-21179 Msa1418310:CDS 25.0%
! ATTTGCTTTCAAAAGATCTT+TGG - tig0024576:21536-21555 None:intergenic 25.0%
! AAAACAAACATAACAACGTT+GGG + tig0024576:21853-21872 Msa1418310:CDS 25.0%
!! TTTTTGTGTCTTTGGTTAAA+AGG + tig0024576:21911-21930 Msa1418310:CDS 25.0%
!! TCAAAAGCTAATTTGAAATC+TGG - tig0024576:21976-21995 None:intergenic 25.0%
! GTTAAAATGTTAGAAGATAG+TGG + tig0024576:21160-21179 Msa1418310:CDS 25.0%
! ATTTGCTTTCAAAAGATCTT+TGG - tig0024576:21536-21555 None:intergenic 25.0%
! AAAACAAACATAACAACGTT+GGG + tig0024576:21853-21872 Msa1418310:CDS 25.0%
!! TTTTTGTGTCTTTGGTTAAA+AGG + tig0024576:21911-21930 Msa1418310:CDS 25.0%
!! TCAAAAGCTAATTTGAAATC+TGG - tig0024576:21976-21995 None:intergenic 25.0%
CATGGATAAAGAAAGACTAA+CGG + tig0024576:20751-20770 Msa1418310:CDS 30.0%
AAACTCAAGTACGTAAAGTT+AGG + tig0024576:20851-20870 Msa1418310:CDS 30.0%
AAGTACGTAAAGTTAGGTTA+TGG + tig0024576:20857-20876 Msa1418310:CDS 30.0%
ATTAAAAGCTATAATCTCGG+AGG + tig0024576:21472-21491 Msa1418310:CDS 30.0%
! ATTTCCAAAGTACCAATTGA+GGG - tig0024576:21599-21618 None:intergenic 30.0%
! TTCTAATTGCATTTTCCGAA+TGG + tig0024576:21636-21655 Msa1418310:CDS 30.0%
! TCTAATTGCATTTTCCGAAT+GGG + tig0024576:21637-21656 Msa1418310:CDS 30.0%
! CTTATTGGAAAGAAGTATAG+CGG - tig0024576:21668-21687 None:intergenic 30.0%
! TTCATTGGCTAGAGAATTAA+TGG + tig0024576:21810-21829 Msa1418310:CDS 30.0%
GAAAACAAACATAACAACGT+TGG + tig0024576:21852-21871 Msa1418310:CDS 30.0%
AACATGAACTGTTCAGAAAA+TGG - tig0024576:21892-21911 None:intergenic 30.0%
!!! GTTCATGTTTTTTGTGTCTT+TGG + tig0024576:21903-21922 Msa1418310:CDS 30.0%
CATGGATAAAGAAAGACTAA+CGG + tig0024576:20751-20770 Msa1418310:CDS 30.0%
AAACTCAAGTACGTAAAGTT+AGG + tig0024576:20851-20870 Msa1418310:CDS 30.0%
AAGTACGTAAAGTTAGGTTA+TGG + tig0024576:20857-20876 Msa1418310:CDS 30.0%
ATTAAAAGCTATAATCTCGG+AGG + tig0024576:21472-21491 Msa1418310:CDS 30.0%
! ATTTCCAAAGTACCAATTGA+GGG - tig0024576:21599-21618 None:intergenic 30.0%
! TTCTAATTGCATTTTCCGAA+TGG + tig0024576:21636-21655 Msa1418310:CDS 30.0%
! TCTAATTGCATTTTCCGAAT+GGG + tig0024576:21637-21656 Msa1418310:CDS 30.0%
! CTTATTGGAAAGAAGTATAG+CGG - tig0024576:21668-21687 None:intergenic 30.0%
! TTCATTGGCTAGAGAATTAA+TGG + tig0024576:21810-21829 Msa1418310:CDS 30.0%
GAAAACAAACATAACAACGT+TGG + tig0024576:21852-21871 Msa1418310:CDS 30.0%
AACATGAACTGTTCAGAAAA+TGG - tig0024576:21892-21911 None:intergenic 30.0%
!!! GTTCATGTTTTTTGTGTCTT+TGG + tig0024576:21903-21922 Msa1418310:CDS 30.0%
! TTTACCGGATTTTCTACAGA+CGG + tig0024576:20826-20845 Msa1418310:CDS 35.0%
TGTGAAAATGAGAATGGTTG+TGG - tig0024576:20897-20916 None:intergenic 35.0%
ATTGTTCTACTCTTCCTCTT+CGG + tig0024576:21043-21062 Msa1418310:CDS 35.0%
! TTAGAAGATAGTGGCGAATT+CGG + tig0024576:21169-21188 Msa1418310:CDS 35.0%
! ATTTTGTCAAGAGCAGGTTT+AGG + tig0024576:21220-21239 Msa1418310:CDS 35.0%
TGACATTATTCCATTTGGCA+AGG - tig0024576:21257-21276 None:intergenic 35.0%
GGACTTGACATTATTCCATT+TGG - tig0024576:21262-21281 None:intergenic 35.0%
TCTTTCATGCATAGATTTGG+TGG - tig0024576:21283-21302 None:intergenic 35.0%
GCTTCTTTCATGCATAGATT+TGG - tig0024576:21286-21305 None:intergenic 35.0%
ACAAGAATGTCAATGTCTCT+TGG - tig0024576:21376-21395 None:intergenic 35.0%
ACAATCATTGCAGAAAGTGA+AGG - tig0024576:21427-21446 None:intergenic 35.0%
!! TGTTTGTTCTTAGCTTGTAG+TGG - tig0024576:21453-21472 None:intergenic 35.0%
TTAACCCTCAATTGGTACTT+TGG + tig0024576:21592-21611 Msa1418310:CDS 35.0%
! CATTTCCAAAGTACCAATTG+AGG - tig0024576:21600-21619 None:intergenic 35.0%
TGTATGAACCAGCTTGTATT+TGG - tig0024576:21710-21729 None:intergenic 35.0%
CATACAGTTAGAACCCATAA+AGG + tig0024576:21724-21743 Msa1418310:CDS 35.0%
TCAGAAAATGGCAAAACCAA+TGG - tig0024576:21880-21899 None:intergenic 35.0%
AAAAGGAAGTTGCTGAAGAA+AGG + tig0024576:21928-21947 Msa1418310:CDS 35.0%
GAACATTTCTGTATTCATGC+TGG + tig0024576:21994-22013 Msa1418310:CDS 35.0%
! ATTCTGGCAGATTGCATTTT+GGG + tig0024576:22216-22235 Msa1418310:intron 35.0%
! TTTACCGGATTTTCTACAGA+CGG + tig0024576:20826-20845 Msa1418310:CDS 35.0%
TGTGAAAATGAGAATGGTTG+TGG - tig0024576:20897-20916 None:intergenic 35.0%
ATTGTTCTACTCTTCCTCTT+CGG + tig0024576:21043-21062 Msa1418310:CDS 35.0%
! TTAGAAGATAGTGGCGAATT+CGG + tig0024576:21169-21188 Msa1418310:CDS 35.0%
! ATTTTGTCAAGAGCAGGTTT+AGG + tig0024576:21220-21239 Msa1418310:CDS 35.0%
TGACATTATTCCATTTGGCA+AGG - tig0024576:21257-21276 None:intergenic 35.0%
GGACTTGACATTATTCCATT+TGG - tig0024576:21262-21281 None:intergenic 35.0%
TCTTTCATGCATAGATTTGG+TGG - tig0024576:21283-21302 None:intergenic 35.0%
GCTTCTTTCATGCATAGATT+TGG - tig0024576:21286-21305 None:intergenic 35.0%
ACAAGAATGTCAATGTCTCT+TGG - tig0024576:21376-21395 None:intergenic 35.0%
ACAATCATTGCAGAAAGTGA+AGG - tig0024576:21427-21446 None:intergenic 35.0%
!! TGTTTGTTCTTAGCTTGTAG+TGG - tig0024576:21453-21472 None:intergenic 35.0%
TTAACCCTCAATTGGTACTT+TGG + tig0024576:21592-21611 Msa1418310:CDS 35.0%
! CATTTCCAAAGTACCAATTG+AGG - tig0024576:21600-21619 None:intergenic 35.0%
TGTATGAACCAGCTTGTATT+TGG - tig0024576:21710-21729 None:intergenic 35.0%
CATACAGTTAGAACCCATAA+AGG + tig0024576:21724-21743 Msa1418310:CDS 35.0%
TCAGAAAATGGCAAAACCAA+TGG - tig0024576:21880-21899 None:intergenic 35.0%
AAAAGGAAGTTGCTGAAGAA+AGG + tig0024576:21928-21947 Msa1418310:CDS 35.0%
GAACATTTCTGTATTCATGC+TGG + tig0024576:21994-22013 Msa1418310:CDS 35.0%
! ATTCTGGCAGATTGCATTTT+GGG + tig0024576:22216-22235 Msa1418310:intron 35.0%
GGATAAAGAAAGACTAACGG+CGG + tig0024576:20754-20773 Msa1418310:CDS 40.0%
TTTCAAAGATTCAACCTCCG+CGG + tig0024576:20784-20803 Msa1418310:CDS 40.0%
TTCACCGTCTGTAGAAAATC+CGG - tig0024576:20833-20852 None:intergenic 40.0%
GACGAGTGTGAAAATGAGAA+TGG - tig0024576:20903-20922 None:intergenic 40.0%
AATTGAACCGATGGCTGTAT+CGG - tig0024576:21026-21045 None:intergenic 40.0%
GAGTAGAACAATTGAACCGA+TGG - tig0024576:21035-21054 None:intergenic 40.0%
AATCCACCAGGTAAATTGGT+GGG - tig0024576:21090-21109 None:intergenic 40.0%
AAATCCACCAGGTAAATTGG+TGG - tig0024576:21091-21110 None:intergenic 40.0%
GCAAAATCCACCAGGTAAAT+TGG - tig0024576:21094-21113 None:intergenic 40.0%
AACCTGCTCTTGACAAAATG+CGG - tig0024576:21219-21238 None:intergenic 40.0%
GAAGCAGAAGCTGTAATGTT+TGG + tig0024576:21313-21332 Msa1418310:CDS 40.0%
!! GACGCACTTTTTGCTAAAAC+AGG + tig0024576:21343-21362 Msa1418310:CDS 40.0%
TTGCAGAAAGTGAAGGAGTT+GGG - tig0024576:21420-21439 None:intergenic 40.0%
ATTGCAGAAAGTGAAGGAGT+TGG - tig0024576:21421-21440 None:intergenic 40.0%
AAGCTATAATCTCGGAGGTA+TGG + tig0024576:21477-21496 Msa1418310:CDS 40.0%
! AGCTATAATCTCGGAGGTAT+GGG + tig0024576:21478-21497 Msa1418310:CDS 40.0%
AGCAAATCCAAATTCCTACG+CGG + tig0024576:21549-21568 Msa1418310:CDS 40.0%
CGGAGAATTTAACCCTCAAT+TGG + tig0024576:21584-21603 Msa1418310:CDS 40.0%
! AATTGCATTTTCCGAATGGG+TGG + tig0024576:21640-21659 Msa1418310:CDS 40.0%
GGTTAGATCAGAGGACTTAT+TGG - tig0024576:21683-21702 None:intergenic 40.0%
ATAAGTCCTCTGATCTAACC+CGG + tig0024576:21683-21702 Msa1418310:CDS 40.0%
CTTGTCATCAGCTCCTTTAT+GGG - tig0024576:21740-21759 None:intergenic 40.0%
TCTTGTCATCAGCTCCTTTA+TGG - tig0024576:21741-21760 None:intergenic 40.0%
!! AGGGAAAGTTGGTGTTTCAT+TGG + tig0024576:21795-21814 Msa1418310:CDS 40.0%
AGAGAATTAATGGCTGTTGC+AGG + tig0024576:21820-21839 Msa1418310:CDS 40.0%
AAGTTGCTGAAGAAAGGTTC+AGG + tig0024576:21934-21953 Msa1418310:CDS 40.0%
CATTTCTGTATTCATGCTGG+TGG + tig0024576:21997-22016 Msa1418310:CDS 40.0%
ACACTTCAAGCAGTTCTCTA+TGG + tig0024576:22109-22128 Msa1418310:CDS 40.0%
CAGTTCTCTATGGTATGAAC+TGG + tig0024576:22119-22138 Msa1418310:CDS 40.0%
! GTATGAACTGGCTTATACTG+AGG + tig0024576:22131-22150 Msa1418310:CDS 40.0%
! CATTCTGGCAGATTGCATTT+TGG + tig0024576:22215-22234 Msa1418310:intron 40.0%
TTAAGTGTAACAGTGCTGTG+TGG + tig0024576:22257-22276 Msa1418310:intron 40.0%
TTATCAACAGAGTCATCCCA+GGG - tig0024576:22328-22347 None:intergenic 40.0%
GGATAAAGAAAGACTAACGG+CGG + tig0024576:20754-20773 Msa1418310:CDS 40.0%
TTTCAAAGATTCAACCTCCG+CGG + tig0024576:20784-20803 Msa1418310:CDS 40.0%
TTCACCGTCTGTAGAAAATC+CGG - tig0024576:20833-20852 None:intergenic 40.0%
GACGAGTGTGAAAATGAGAA+TGG - tig0024576:20903-20922 None:intergenic 40.0%
AATTGAACCGATGGCTGTAT+CGG - tig0024576:21026-21045 None:intergenic 40.0%
GAGTAGAACAATTGAACCGA+TGG - tig0024576:21035-21054 None:intergenic 40.0%
AATCCACCAGGTAAATTGGT+GGG - tig0024576:21090-21109 None:intergenic 40.0%
AAATCCACCAGGTAAATTGG+TGG - tig0024576:21091-21110 None:intergenic 40.0%
GCAAAATCCACCAGGTAAAT+TGG - tig0024576:21094-21113 None:intergenic 40.0%
AACCTGCTCTTGACAAAATG+CGG - tig0024576:21219-21238 None:intergenic 40.0%
GAAGCAGAAGCTGTAATGTT+TGG + tig0024576:21313-21332 Msa1418310:CDS 40.0%
!! GACGCACTTTTTGCTAAAAC+AGG + tig0024576:21343-21362 Msa1418310:CDS 40.0%
TTGCAGAAAGTGAAGGAGTT+GGG - tig0024576:21420-21439 None:intergenic 40.0%
ATTGCAGAAAGTGAAGGAGT+TGG - tig0024576:21421-21440 None:intergenic 40.0%
AAGCTATAATCTCGGAGGTA+TGG + tig0024576:21477-21496 Msa1418310:CDS 40.0%
! AGCTATAATCTCGGAGGTAT+GGG + tig0024576:21478-21497 Msa1418310:CDS 40.0%
AGCAAATCCAAATTCCTACG+CGG + tig0024576:21549-21568 Msa1418310:CDS 40.0%
CGGAGAATTTAACCCTCAAT+TGG + tig0024576:21584-21603 Msa1418310:CDS 40.0%
! AATTGCATTTTCCGAATGGG+TGG + tig0024576:21640-21659 Msa1418310:CDS 40.0%
GGTTAGATCAGAGGACTTAT+TGG - tig0024576:21683-21702 None:intergenic 40.0%
ATAAGTCCTCTGATCTAACC+CGG + tig0024576:21683-21702 Msa1418310:CDS 40.0%
CTTGTCATCAGCTCCTTTAT+GGG - tig0024576:21740-21759 None:intergenic 40.0%
TCTTGTCATCAGCTCCTTTA+TGG - tig0024576:21741-21760 None:intergenic 40.0%
!! AGGGAAAGTTGGTGTTTCAT+TGG + tig0024576:21795-21814 Msa1418310:CDS 40.0%
AGAGAATTAATGGCTGTTGC+AGG + tig0024576:21820-21839 Msa1418310:CDS 40.0%
AAGTTGCTGAAGAAAGGTTC+AGG + tig0024576:21934-21953 Msa1418310:CDS 40.0%
CATTTCTGTATTCATGCTGG+TGG + tig0024576:21997-22016 Msa1418310:CDS 40.0%
ACACTTCAAGCAGTTCTCTA+TGG + tig0024576:22109-22128 Msa1418310:CDS 40.0%
CAGTTCTCTATGGTATGAAC+TGG + tig0024576:22119-22138 Msa1418310:CDS 40.0%
! GTATGAACTGGCTTATACTG+AGG + tig0024576:22131-22150 Msa1418310:CDS 40.0%
! CATTCTGGCAGATTGCATTT+TGG + tig0024576:22215-22234 Msa1418310:intron 40.0%
TTAAGTGTAACAGTGCTGTG+TGG + tig0024576:22257-22276 Msa1418310:intron 40.0%
TTATCAACAGAGTCATCCCA+GGG - tig0024576:22328-22347 None:intergenic 40.0%
!! TCGTCGGATTTTGATAACCG+CGG - tig0024576:20804-20823 None:intergenic 45.0%
CAAAATCCGACGACGTTTAC+CGG + tig0024576:20811-20830 Msa1418310:CDS 45.0%
GAAAATCCGGTAAACGTCGT+CGG - tig0024576:20820-20839 None:intergenic 45.0%
! ATCGGTGAGTTGGAACTGAA+CGG - tig0024576:20948-20967 None:intergenic 45.0%
!!! GGAGTTTTAGATCGGTGAGT+TGG - tig0024576:20958-20977 None:intergenic 45.0%
!!! GAGACGGTGGAGTTTTAGAT+CGG - tig0024576:20966-20985 None:intergenic 45.0%
!! TGTATCGGTGTCAAGTTGGA+CGG - tig0024576:21011-21030 None:intergenic 45.0%
ATCCACCAGGTAAATTGGTG+GGG - tig0024576:21089-21108 None:intergenic 45.0%
! GGATTTTGCGTGCTACAAAC+CGG + tig0024576:21105-21124 Msa1418310:CDS 45.0%
!! GCTATTTTCCGCTCTTTCTC+CGG - tig0024576:21127-21146 None:intergenic 45.0%
GAAAGAGCGGAAAATAGCAG+TGG + tig0024576:21129-21148 Msa1418310:CDS 45.0%
GACGAAACTTCCTTGCCAAA+TGG + tig0024576:21244-21263 Msa1418310:CDS 45.0%
AAATCCAAATTCCTACGCGG+TGG + tig0024576:21552-21571 Msa1418310:CDS 45.0%
AACCAGCTTGTATTTGGACC+GGG - tig0024576:21704-21723 None:intergenic 45.0%
GAACCAGCTTGTATTTGGAC+CGG - tig0024576:21705-21724 None:intergenic 45.0%
TACCAGAAAGAAGACGAGAC+AGG + tig0024576:21775-21794 Msa1418310:CDS 45.0%
ACCAGAAAGAAGACGAGACA+GGG + tig0024576:21776-21795 Msa1418310:CDS 45.0%
CATAACAACGTTGGGTCCAT+TGG + tig0024576:21861-21880 Msa1418310:CDS 45.0%
AGAATCTCCAACTCAGTGAG+TGG + tig0024576:22046-22065 Msa1418310:CDS 45.0%
CGGATGACTCTGCATAGATT+TGG + tig0024576:22084-22103 Msa1418310:CDS 45.0%
! ACTGGCTTATACTGAGGCAA+AGG + tig0024576:22137-22156 Msa1418310:CDS 45.0%
CTGGCTTATACTGAGGCAAA+GGG + tig0024576:22138-22157 Msa1418310:CDS 45.0%
TATCAACAGAGTCATCCCAG+GGG - tig0024576:22327-22346 None:intergenic 45.0%
CTTATCAACAGAGTCATCCC+AGG - tig0024576:22329-22348 None:intergenic 45.0%
!! TCGTCGGATTTTGATAACCG+CGG - tig0024576:20804-20823 None:intergenic 45.0%
CAAAATCCGACGACGTTTAC+CGG + tig0024576:20811-20830 Msa1418310:CDS 45.0%
GAAAATCCGGTAAACGTCGT+CGG - tig0024576:20820-20839 None:intergenic 45.0%
! ATCGGTGAGTTGGAACTGAA+CGG - tig0024576:20948-20967 None:intergenic 45.0%
!!! GGAGTTTTAGATCGGTGAGT+TGG - tig0024576:20958-20977 None:intergenic 45.0%
!!! GAGACGGTGGAGTTTTAGAT+CGG - tig0024576:20966-20985 None:intergenic 45.0%
!! TGTATCGGTGTCAAGTTGGA+CGG - tig0024576:21011-21030 None:intergenic 45.0%
ATCCACCAGGTAAATTGGTG+GGG - tig0024576:21089-21108 None:intergenic 45.0%
! GGATTTTGCGTGCTACAAAC+CGG + tig0024576:21105-21124 Msa1418310:CDS 45.0%
!! GCTATTTTCCGCTCTTTCTC+CGG - tig0024576:21127-21146 None:intergenic 45.0%
GAAAGAGCGGAAAATAGCAG+TGG + tig0024576:21129-21148 Msa1418310:CDS 45.0%
GACGAAACTTCCTTGCCAAA+TGG + tig0024576:21244-21263 Msa1418310:CDS 45.0%
AAATCCAAATTCCTACGCGG+TGG + tig0024576:21552-21571 Msa1418310:CDS 45.0%
AACCAGCTTGTATTTGGACC+GGG - tig0024576:21704-21723 None:intergenic 45.0%
GAACCAGCTTGTATTTGGAC+CGG - tig0024576:21705-21724 None:intergenic 45.0%
TACCAGAAAGAAGACGAGAC+AGG + tig0024576:21775-21794 Msa1418310:CDS 45.0%
ACCAGAAAGAAGACGAGACA+GGG + tig0024576:21776-21795 Msa1418310:CDS 45.0%
CATAACAACGTTGGGTCCAT+TGG + tig0024576:21861-21880 Msa1418310:CDS 45.0%
AGAATCTCCAACTCAGTGAG+TGG + tig0024576:22046-22065 Msa1418310:CDS 45.0%
CGGATGACTCTGCATAGATT+TGG + tig0024576:22084-22103 Msa1418310:CDS 45.0%
! ACTGGCTTATACTGAGGCAA+AGG + tig0024576:22137-22156 Msa1418310:CDS 45.0%
CTGGCTTATACTGAGGCAAA+GGG + tig0024576:22138-22157 Msa1418310:CDS 45.0%
TATCAACAGAGTCATCCCAG+GGG - tig0024576:22327-22346 None:intergenic 45.0%
CTTATCAACAGAGTCATCCC+AGG - tig0024576:22329-22348 None:intergenic 45.0%
!! TCGGATTTTGATAACCGCGG+AGG - tig0024576:20801-20820 None:intergenic 50.0%
CGGTGAGGAAGAGTAAGAGA+GGG - tig0024576:20928-20947 None:intergenic 50.0%
ACGGTGAGGAAGAGTAAGAG+AGG - tig0024576:20929-20948 None:intergenic 50.0%
! TGAGTTGGAACTGAACGGTG+AGG - tig0024576:20943-20962 None:intergenic 50.0%
CGAGCAAGAGTTGTGAGAGA+CGG - tig0024576:20982-21001 None:intergenic 50.0%
!! TGGCTGTATCGGTGTCAAGT+TGG - tig0024576:21015-21034 None:intergenic 50.0%
CTTGACACCGATACAGCCAT+CGG + tig0024576:21016-21035 Msa1418310:CDS 50.0%
ACGATCCCCACCAATTTACC+TGG + tig0024576:21081-21100 Msa1418310:CDS 50.0%
ATCCCCACCAATTTACCTGG+TGG + tig0024576:21084-21103 Msa1418310:CDS 50.0%
TGTAGCACGCAAAATCCACC+AGG - tig0024576:21102-21121 None:intergenic 50.0%
GCTACAAACCGGAGAAAGAG+CGG + tig0024576:21116-21135 Msa1418310:CDS 50.0%
AAGACCACCGCGTAGGAATT+TGG - tig0024576:21559-21578 None:intergenic 50.0%
! TTTGGACCGGGTTAGATCAG+AGG - tig0024576:21692-21711 None:intergenic 50.0%
AACCCGGTCCAAATACAAGC+TGG + tig0024576:21699-21718 Msa1418310:CDS 50.0%
TCCCTGTCTCGTCTTCTTTC+TGG - tig0024576:21780-21799 None:intergenic 50.0%
GAAGACGAGACAGGGAAAGT+TGG + tig0024576:21784-21803 Msa1418310:CDS 50.0%
CCATATGCCACTCACTGAGT+TGG - tig0024576:22056-22075 None:intergenic 50.0%
CCAACTCAGTGAGTGGCATA+TGG + tig0024576:22053-22072 Msa1418310:CDS 50.0%
AGTGGCATATGGAACCGTCT+CGG + tig0024576:22064-22083 Msa1418310:CDS 50.0%
CTATGCAGAGTCATCCGAGA+CGG - tig0024576:22081-22100 None:intergenic 50.0%
CTTATACTGAGGCAAAGGGC+CGG + tig0024576:22142-22161 Msa1418310:CDS 50.0%
TTATACTGAGGCAAAGGGCC+GGG + tig0024576:22143-22162 Msa1418310:CDS 50.0%
GTGTAACAGTGCTGTGTGGA+AGG + tig0024576:22261-22280 Msa1418310:intron 50.0%
AACAGAAACAGGGACGCTGA+CGG - tig0024576:22356-22375 None:intergenic 50.0%
!! TCGGATTTTGATAACCGCGG+AGG - tig0024576:20801-20820 None:intergenic 50.0%
CGGTGAGGAAGAGTAAGAGA+GGG - tig0024576:20928-20947 None:intergenic 50.0%
ACGGTGAGGAAGAGTAAGAG+AGG - tig0024576:20929-20948 None:intergenic 50.0%
! TGAGTTGGAACTGAACGGTG+AGG - tig0024576:20943-20962 None:intergenic 50.0%
CGAGCAAGAGTTGTGAGAGA+CGG - tig0024576:20982-21001 None:intergenic 50.0%
!! TGGCTGTATCGGTGTCAAGT+TGG - tig0024576:21015-21034 None:intergenic 50.0%
CTTGACACCGATACAGCCAT+CGG + tig0024576:21016-21035 Msa1418310:CDS 50.0%
ACGATCCCCACCAATTTACC+TGG + tig0024576:21081-21100 Msa1418310:CDS 50.0%
ATCCCCACCAATTTACCTGG+TGG + tig0024576:21084-21103 Msa1418310:CDS 50.0%
TGTAGCACGCAAAATCCACC+AGG - tig0024576:21102-21121 None:intergenic 50.0%
GCTACAAACCGGAGAAAGAG+CGG + tig0024576:21116-21135 Msa1418310:CDS 50.0%
AAGACCACCGCGTAGGAATT+TGG - tig0024576:21559-21578 None:intergenic 50.0%
! TTTGGACCGGGTTAGATCAG+AGG - tig0024576:21692-21711 None:intergenic 50.0%
AACCCGGTCCAAATACAAGC+TGG + tig0024576:21699-21718 Msa1418310:CDS 50.0%
TCCCTGTCTCGTCTTCTTTC+TGG - tig0024576:21780-21799 None:intergenic 50.0%
GAAGACGAGACAGGGAAAGT+TGG + tig0024576:21784-21803 Msa1418310:CDS 50.0%
CCATATGCCACTCACTGAGT+TGG - tig0024576:22056-22075 None:intergenic 50.0%
CCAACTCAGTGAGTGGCATA+TGG + tig0024576:22053-22072 Msa1418310:CDS 50.0%
AGTGGCATATGGAACCGTCT+CGG + tig0024576:22064-22083 Msa1418310:CDS 50.0%
CTATGCAGAGTCATCCGAGA+CGG - tig0024576:22081-22100 None:intergenic 50.0%
CTTATACTGAGGCAAAGGGC+CGG + tig0024576:22142-22161 Msa1418310:CDS 50.0%
TTATACTGAGGCAAAGGGCC+GGG + tig0024576:22143-22162 Msa1418310:CDS 50.0%
GTGTAACAGTGCTGTGTGGA+AGG + tig0024576:22261-22280 Msa1418310:intron 50.0%
AACAGAAACAGGGACGCTGA+CGG - tig0024576:22356-22375 None:intergenic 50.0%
GGGTCGCAACAGCATAGACA+TGG + tig0024576:20733-20752 Msa1418310:CDS 55.0%
GCAAGAGTTGTGAGAGACGG+TGG - tig0024576:20979-20998 None:intergenic 55.0%
TCGCGTAGTACAGACCGAAG+AGG - tig0024576:21060-21079 None:intergenic 55.0%
! CGCCGCATTTTGTCAAGAGC+AGG + tig0024576:21214-21233 Msa1418310:CDS 55.0%
! GGAGGTATGGGTTGTAGTGC+TGG + tig0024576:21490-21509 Msa1418310:CDS 55.0%
CAAAGGGCCGGGTTGCAAAA+GGG + tig0024576:22154-22173 Msa1418310:CDS 55.0%
AAAGGGCCGGGTTGCAAAAG+GGG + tig0024576:22155-22174 Msa1418310:CDS 55.0%
TTGCAAAAGGGGATCGGGTC+TGG + tig0024576:22166-22185 Msa1418310:CDS 55.0%
CGGGTCTGGCAGATTGCATT+CGG + tig0024576:22180-22199 Msa1418310:CDS 55.0%
GGGTCTGGCAGATTGCATTC+GGG + tig0024576:22181-22200 Msa1418310:CDS 55.0%
ACAGAAACAGGGACGCTGAC+GGG - tig0024576:22355-22374 None:intergenic 55.0%
GGGTCGCAACAGCATAGACA+TGG + tig0024576:20733-20752 Msa1418310:CDS 55.0%
GCAAGAGTTGTGAGAGACGG+TGG - tig0024576:20979-20998 None:intergenic 55.0%
TCGCGTAGTACAGACCGAAG+AGG - tig0024576:21060-21079 None:intergenic 55.0%
! CGCCGCATTTTGTCAAGAGC+AGG + tig0024576:21214-21233 Msa1418310:CDS 55.0%
! GGAGGTATGGGTTGTAGTGC+TGG + tig0024576:21490-21509 Msa1418310:CDS 55.0%
CAAAGGGCCGGGTTGCAAAA+GGG + tig0024576:22154-22173 Msa1418310:CDS 55.0%
AAAGGGCCGGGTTGCAAAAG+GGG + tig0024576:22155-22174 Msa1418310:CDS 55.0%
TTGCAAAAGGGGATCGGGTC+TGG + tig0024576:22166-22185 Msa1418310:CDS 55.0%
CGGGTCTGGCAGATTGCATT+CGG + tig0024576:22180-22199 Msa1418310:CDS 55.0%
GGGTCTGGCAGATTGCATTC+GGG + tig0024576:22181-22200 Msa1418310:CDS 55.0%
ACAGAAACAGGGACGCTGAC+GGG - tig0024576:22355-22374 None:intergenic 55.0%
! CTACGCGGTGGTCTTGAGCA+CGG + tig0024576:21564-21583 Msa1418310:CDS 60.0%
GTATAGCGGCGCCACCCATT+CGG - tig0024576:21654-21673 None:intergenic 60.0%
GCAAAGGGCCGGGTTGCAAA+AGG + tig0024576:22153-22172 Msa1418310:CDS 60.0%
GCCGGGTTGCAAAAGGGGAT+CGG + tig0024576:22160-22179 Msa1418310:CDS 60.0%
! CCCGATCCCCTTTTGCAACC+CGG - tig0024576:22164-22183 None:intergenic 60.0%
CCGGGTTGCAAAAGGGGATC+GGG + tig0024576:22161-22180 Msa1418310:CDS 60.0%
CGGGTCAGCGACTTGCATTC+TGG + tig0024576:22200-22219 Msa1418310:intron 60.0%
! CTACGCGGTGGTCTTGAGCA+CGG + tig0024576:21564-21583 Msa1418310:CDS 60.0%
GTATAGCGGCGCCACCCATT+CGG - tig0024576:21654-21673 None:intergenic 60.0%
GCAAAGGGCCGGGTTGCAAA+AGG + tig0024576:22153-22172 Msa1418310:CDS 60.0%
GCCGGGTTGCAAAAGGGGAT+CGG + tig0024576:22160-22179 Msa1418310:CDS 60.0%
! CCCGATCCCCTTTTGCAACC+CGG - tig0024576:22164-22183 None:intergenic 60.0%
CCGGGTTGCAAAAGGGGATC+GGG + tig0024576:22161-22180 Msa1418310:CDS 60.0%
CGGGTCAGCGACTTGCATTC+TGG + tig0024576:22200-22219 Msa1418310:intron 60.0%
CGTGCTCAAGACCACCGCGT+AGG - tig0024576:21566-21585 None:intergenic 65.0%
ACTTGCCCGTCGTCGGGGAT+TGG + tig0024576:22293-22312 Msa1418310:CDS 65.0%
CGTGCTCAAGACCACCGCGT+AGG - tig0024576:21566-21585 None:intergenic 65.0%
ACTTGCCCGTCGTCGGGGAT+TGG + tig0024576:22293-22312 Msa1418310:CDS 65.0%
GACGACGGGCAAGTCGCGCA+CGG - tig0024576:22287-22306 None:intergenic 70.0%
GTGCGCGACTTGCCCGTCGT+CGG + tig0024576:22286-22305 Msa1418310:CDS 70.0%
TGCGCGACTTGCCCGTCGTC+GGG + tig0024576:22287-22306 Msa1418310:CDS 70.0%
TGCCCGTCGTCGGGGATTGG+CGG + tig0024576:22296-22315 Msa1418310:CDS 70.0%
! GGATTGGCGGGGCAACCCCT+GGG + tig0024576:22309-22328 Msa1418310:CDS 70.0%
GACGACGGGCAAGTCGCGCA+CGG - tig0024576:22287-22306 None:intergenic 70.0%
GTGCGCGACTTGCCCGTCGT+CGG + tig0024576:22286-22305 Msa1418310:CDS 70.0%
TGCGCGACTTGCCCGTCGTC+GGG + tig0024576:22287-22306 Msa1418310:CDS 70.0%
TGCCCGTCGTCGGGGATTGG+CGG + tig0024576:22296-22315 Msa1418310:CDS 70.0%
! GGATTGGCGGGGCAACCCCT+GGG + tig0024576:22309-22328 Msa1418310:CDS 70.0%
GCGCGACTTGCCCGTCGTCG+GGG + tig0024576:22288-22307 Msa1418310:CDS 75.0%
! GCCCGTCGTCGGGGATTGGC+GGG + tig0024576:22297-22316 Msa1418310:CDS 75.0%
CCCCGCCAATCCCCGACGAC+GGG - tig0024576:22301-22320 None:intergenic 75.0%
! CCCGTCGTCGGGGATTGGCG+GGG + tig0024576:22298-22317 Msa1418310:CDS 75.0%
GCCCCGCCAATCCCCGACGA+CGG - tig0024576:22302-22321 None:intergenic 75.0%
! GGGATTGGCGGGGCAACCCC+TGG + tig0024576:22308-22327 Msa1418310:CDS 75.0%
GCGCGACTTGCCCGTCGTCG+GGG + tig0024576:22288-22307 Msa1418310:CDS 75.0%
! GCCCGTCGTCGGGGATTGGC+GGG + tig0024576:22297-22316 Msa1418310:CDS 75.0%
CCCCGCCAATCCCCGACGAC+GGG - tig0024576:22301-22320 None:intergenic 75.0%
! CCCGTCGTCGGGGATTGGCG+GGG + tig0024576:22298-22317 Msa1418310:CDS 75.0%
GCCCCGCCAATCCCCGACGA+CGG - tig0024576:22302-22321 None:intergenic 75.0%
! GGGATTGGCGGGGCAACCCC+TGG + tig0024576:22308-22327 Msa1418310:CDS 75.0%
Chromosome Type Strat End Strand Name
tig0024576 gene 20731 22384 20731 ID=Msa1418310;Name=Msa1418310
tig0024576 mRNA 20731 22384 20731 ID=Msa1418310-mRNA-1;Parent=Msa1418310;Name=Msa1418310-mRNA-1;_AED=0.02;_eAED=0.02;_QI=0|0|0|1|1|1|2|0|528
tig0024576 exon 20731 22202 20731 ID=Msa1418310-mRNA-1:exon:287;Parent=Msa1418310-mRNA-1
tig0024576 exon 22270 22384 22270 ID=Msa1418310-mRNA-1:exon:288;Parent=Msa1418310-mRNA-1
tig0024576 CDS 20731 22202 20731 ID=Msa1418310-mRNA-1:cds;Parent=Msa1418310-mRNA-1
tig0024576 CDS 22270 22384 22270 ID=Msa1418310-mRNA-1:cds;Parent=Msa1418310-mRNA-1
Gene Sequence

>Msa1418310

ATGGGTCGCAACAGCATAGACATGGATAAAGAAAGACTAACGGCGGAGATGAATTTCAAAGATTCAACCTCCGCGGTTATCAAAATCCGACGACGTTTACCGGATTTTCTACAGACGGTGAAACTCAAGTACGTAAAGTTAGGTTATGGCTATTCATGCAACGCCACAACCATTCTCATTTTCACACTCGTCGTCCCTCTCTTACTCTTCCTCACCGTTCAGTTCCAACTCACCGATCTAAAACTCCACCGTCTCTCACAACTCTTGCTCGAACACACCGTCCAACTTGACACCGATACAGCCATCGGTTCAATTGTTCTACTCTTCCTCTTCGGTCTGTACTACGCGAAACGATCCCCACCAATTTACCTGGTGGATTTTGCGTGCTACAAACCGGAGAAAGAGCGGAAAATAGCAGTGGAATCTTTTGTTAAAATGTTAGAAGATAGTGGCGAATTCGGAGAAGAAACACTTCAATTTCAACGCCGCATTTTGTCAAGAGCAGGTTTAGGCGACGAAACTTCCTTGCCAAATGGAATAATGTCAAGTCCACCAAATCTATGCATGAAAGAAGCGCGTTTAGAAGCAGAAGCTGTAATGTTTGGATCATTAGACGCACTTTTTGCTAAAACAGGCGTTAATCCAAGAGACATTGACATTCTTGTTGTAAATTGTAGTTTGTTTAACCCAACTCCTTCACTTTCTGCAATGATTGTGAACCACTACAAGCTAAGAACAAACATTAAAAGCTATAATCTCGGAGGTATGGGTTGTAGTGCTGGTCTTATTTCAATTGATCTTGCCAAAGATCTTTTGAAAGCAAATCCAAATTCCTACGCGGTGGTCTTGAGCACGGAGAATTTAACCCTCAATTGGTACTTTGGAAATGATCGTTCAATGCTTCTTTCTAATTGCATTTTCCGAATGGGTGGCGCCGCTATACTTCTTTCCAATAAGTCCTCTGATCTAACCCGGTCCAAATACAAGCTGGTTCATACAGTTAGAACCCATAAAGGAGCTGATGACAAGAACTATAACTGTGTTTACCAGAAAGAAGACGAGACAGGGAAAGTTGGTGTTTCATTGGCTAGAGAATTAATGGCTGTTGCAGGAGATGCTTTGAAAACAAACATAACAACGTTGGGTCCATTGGTTTTGCCATTTTCTGAACAGTTCATGTTTTTTGTGTCTTTGGTTAAAAGGAAGTTGCTGAAGAAAGGTTCAGGTGTGAAACCTTATATACCAGATTTCAAATTAGCTTTTGAACATTTCTGTATTCATGCTGGTGGAAGAGCTGTTCTTGATGAGTTGCAGAAGAATCTCCAACTCAGTGAGTGGCATATGGAACCGTCTCGGATGACTCTGCATAGATTTGGAAACACTTCAAGCAGTTCTCTATGGTATGAACTGGCTTATACTGAGGCAAAGGGCCGGGTTGCAAAAGGGGATCGGGTCTGGCAGATTGCATTCGGTGCTGTGTGGAAGGCCGTGCGCGACTTGCCCGTCGTCGGGGATTGGCGGGGCAACCCCTGGGATGACTCTGTTGATAAGTATCCCGTCAGCGTCCCTGTTTCTGTTGCTTCTTAA
Protein sequence

>Msa1418310

MGRNSIDMDKERLTAEMNFKDSTSAVIKIRRRLPDFLQTVKLKYVKLGYGYSCNATTILIFTLVVPLLLFLTVQFQLTDLKLHRLSQLLLEHTVQLDTDTAIGSIVLLFLFGLYYAKRSPPIYLVDFACYKPEKERKIAVESFVKMLEDSGEFGEETLQFQRRILSRAGLGDETSLPNGIMSSPPNLCMKEARLEAEAVMFGSLDALFAKTGVNPRDIDILVVNCSLFNPTPSLSAMIVNHYKLRTNIKSYNLGGMGCSAGLISIDLAKDLLKANPNSYAVVLSTENLTLNWYFGNDRSMLLSNCIFRMGGAAILLSNKSSDLTRSKYKLVHTVRTHKGADDKNYNCVYQKEDETGKVGVSLARELMAVAGDALKTNITTLGPLVLPFSEQFMFFVSLVKRKLLKKGSGVKPYIPDFKLAFEHFCIHAGGRAVLDELQKNLQLSEWHMEPSRMTLHRFGNTSSSSLWYELAYTEAKGRVAKGDRVWQIAFGAVWKAVRDLPVVGDWRGNPWDDSVDKYPVSVPVSVAS*