AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa0522510

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0522510 MtrunA17_Chr3g0141051 97.940 534 8 1 1 534 1 531 0.0 1070
Msa0522510 MtrunA17_Chr5g0428201 81.262 539 93 4 1 531 1 539 0.0 885
Msa0522510 MtrunA17_Chr4g0049411 67.115 520 166 3 17 534 13 529 0.0 687
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0522510 AT1G58290.1 77.064 545 112 5 1 534 1 543 0.0 832
Msa0522510 AT1G09940.1 74.074 540 120 9 1 531 1 529 0.0 793
Msa0522510 AT2G31250.1 60.149 537 188 10 1 528 1 520 0.0 613

Find 184 sgRNAs with CRISPR-Local

Find 249 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
TTAATCGCCGATGAAATTTA+AGG 0.165657 3_4:+75710988 Msa0522510:five_prime_UTR
GACCCTTCCACTCACTCTTT+TGG 0.177685 3_4:-75711200 None:intergenic
ACGTCATCTTTCATGAATAA+TGG 0.203444 3_4:-75713097 None:intergenic
TGGCAGCCACAACCTCTTTA+AGG 0.223188 3_4:-75713246 None:intergenic
AAAGGCTTTGTTTGGAAGTT+TGG 0.234640 3_4:+75714107 Msa0522510:three_prime_UTR
TTCAATCTAGGGTTAGGGTT+AGG 0.235094 3_4:+75711296 Msa0522510:five_prime_UTR
GAGTCTATTATTGTGTTTAA+AGG 0.239579 3_4:+75714089 Msa0522510:three_prime_UTR
TCTTCATTCTCCTTCAATCT+AGG 0.257942 3_4:+75711284 Msa0522510:five_prime_UTR
ATGCAATAACTGTCGGAAAA+AGG 0.258377 3_4:+75712750 Msa0522510:CDS
CACTTTCTCCGGTCCCAAAT+TGG 0.259254 3_4:+75711347 Msa0522510:CDS
TCTGCTTGTCCAAACTCATT+TGG 0.268213 3_4:+75713845 Msa0522510:three_prime_UTR
TGTTGGATCCATCTCACTTC+TGG 0.271267 3_4:-75713666 None:intergenic
TTCTCCTTCAATCTAGGGTT+AGG 0.275190 3_4:+75711290 Msa0522510:five_prime_UTR
AATTGTCGGTAAAGTTATAT+TGG 0.276088 3_4:-75710936 None:intergenic
CTGCTTGTCCAAACTCATTT+GGG 0.276725 3_4:+75713846 Msa0522510:three_prime_UTR
GTATTTACTACGAATTATAT+TGG 0.280462 3_4:+75713943 Msa0522510:three_prime_UTR
AGTGCCAAGTTTATATATTC+TGG 0.282827 3_4:+75713994 Msa0522510:three_prime_UTR
AGAGACTGAAATATCTGTTT+TGG 0.298449 3_4:+75713612 Msa0522510:CDS
CGTCATCTTTCATGAATAAT+GGG 0.303979 3_4:-75713096 None:intergenic
GAGGAATAGAGACTCCAATT+TGG 0.305860 3_4:-75711361 None:intergenic
TCAATCTAGGGTTAGGGTTA+GGG 0.313893 3_4:+75711297 Msa0522510:five_prime_UTR
ATGGTCCAATGCAACATTTA+AGG 0.316246 3_4:+75713515 Msa0522510:CDS
TGTTCTCAAGGGTCTCAGTT+AGG 0.318272 3_4:-75713561 None:intergenic
TATATTGCGATTTGTCTCTC+TGG 0.320355 3_4:-75711157 None:intergenic
CTCTTTGACACCACGGTGTT+GGG 0.321524 3_4:-75712424 None:intergenic
AGAACCACTTTCACTCAAAA+AGG 0.332496 3_4:+75711447 Msa0522510:CDS
TTTCCTTTCATTAGAATAAG+AGG 0.335859 3_4:+75713715 Msa0522510:three_prime_UTR
TGCACTGCTGTGGTTGCTCT+TGG 0.336998 3_4:+75714065 Msa0522510:three_prime_UTR
CCTCCAACATCTTGACTTGC+TGG 0.341053 3_4:-75713133 None:intergenic
GGTCTTGAGTCTCTTGTATT+GGG 0.347849 3_4:+75712635 Msa0522510:CDS
ATATATCTCCATTCGGTTGC+AGG 0.348244 3_4:-75712388 None:intergenic
TGGTCTTGAGTCTCTTGTAT+TGG 0.351928 3_4:+75712634 Msa0522510:CDS
AGGAATAGAGACTCCAATTT+GGG 0.358382 3_4:-75711360 None:intergenic
GCATTATCATGCGAGGCTTC+AGG 0.359923 3_4:-75712851 None:intergenic
AAAGCTGGTCATCAAACATT+TGG 0.383472 3_4:+75712907 Msa0522510:CDS
GCTCTAGGCCATTCTGCTTC+CGG 0.389081 3_4:-75712312 None:intergenic
AGGAGCAGCATTGTCGTCAT+TGG 0.397753 3_4:+75712240 Msa0522510:CDS
AGTTGAAACAATTTGAAGCT+TGG 0.400753 3_4:+75713323 Msa0522510:CDS
TTGTCTCTCTGGGTTCTCAT+TGG 0.404538 3_4:-75711146 None:intergenic
CAAGAGAGCATTTCTGAAAG+AGG 0.405927 3_4:-75713028 None:intergenic
GAGCCTATGCTGAAAGGATC+AGG 0.406263 3_4:+75713386 Msa0522510:CDS
GGACAAGGAGTTAACGGCTT+TGG 0.406926 3_4:+75712701 Msa0522510:CDS
TGCTCGCAAAGCTCTGAAAC+AGG 0.413070 3_4:-75712557 None:intergenic
GTTCTCAAGGGTCTCAGTTA+GGG 0.416753 3_4:-75713560 None:intergenic
GCCGTTTCAACCACTTTCTC+CGG 0.422111 3_4:+75711336 Msa0522510:CDS
CAGAATTCTGATCAAACTAA+TGG 0.426228 3_4:+75711489 Msa0522510:CDS
TAGTTATTATACTGTTGAGT+AGG 0.426249 3_4:+75711067 Msa0522510:five_prime_UTR
TTGTGTTTAAAGGCTTTGTT+TGG 0.427173 3_4:+75714099 Msa0522510:three_prime_UTR
AACTGATAAATGGGTGGGAA+TGG 0.427322 3_4:-75711412 None:intergenic
ATTTATCGACAATTAATTGT+CGG 0.429623 3_4:-75710950 None:intergenic
TCTAAGCCGATCCTCTTTGT+TGG 0.438084 3_4:-75713266 None:intergenic
AATCTTCTTCATCTTCTTCG+AGG 0.440829 3_4:+75711385 Msa0522510:CDS
GAACAGAAATGTCGACGAAA+AGG 0.442018 3_4:-75713162 None:intergenic
CTTCATTCTCCTTCAATCTA+GGG 0.444697 3_4:+75711285 Msa0522510:five_prime_UTR
ATATTGGCCTAAAATTTGTC+CGG 0.451489 3_4:+75713959 Msa0522510:three_prime_UTR
TAACCCTAACCCTAGATTGA+AGG 0.453355 3_4:-75711294 None:intergenic
GCAGAGACTAATATTGCTGC+TGG 0.454882 3_4:+75712779 Msa0522510:CDS
TCTCCTTCAATCTAGGGTTA+GGG 0.455047 3_4:+75711291 Msa0522510:five_prime_UTR
ATGGAAGCGCAGGCGATCAT+TGG 0.455997 3_4:+75713295 Msa0522510:CDS
CAAGGGTCTCAGTTAGGGTT+CGG 0.456916 3_4:-75713555 None:intergenic
GGGAATGGAAGAGAGTGCTT+TGG 0.457252 3_4:+75714133 Msa0522510:three_prime_UTR
AGCTGTGGATGATCTTAGTC+GGG 0.458876 3_4:+75713471 Msa0522510:CDS
CGCATAGACACAACAATCAA+TGG 0.462740 3_4:-75713822 None:intergenic
AGAGAGAGATGGAAAGAGTG+TGG 0.464909 3_4:+75711102 Msa0522510:five_prime_UTR
GTTAAGCAAGTTGTCAAAGT+TGG 0.466075 3_4:+75712680 Msa0522510:CDS
AAAGTTGGACAAGGAGTTAA+CGG 0.467613 3_4:+75712695 Msa0522510:CDS
AATGGAAGAGAGTGCTTTGG+AGG 0.469792 3_4:+75714136 Msa0522510:three_prime_UTR
TGCTGAGCTTGAGAAATGCT+TGG 0.471267 3_4:+75713411 Msa0522510:CDS
AAGAAGATGAAGAAGATTTG+AGG 0.472152 3_4:-75711380 None:intergenic
AATTTAACCTTAAATTTCAT+CGG 0.475180 3_4:-75710995 None:intergenic
ATATTGCGATTTGTCTCTCT+GGG 0.478137 3_4:-75711156 None:intergenic
TGAGAAATGCTTGGGTAAGA+TGG 0.483561 3_4:+75713420 Msa0522510:CDS
TTAGTCGGGGTATTGTGAAT+AGG 0.483898 3_4:+75713485 Msa0522510:CDS
TGAAGCTTGGAGAGACTCGC+TGG 0.485909 3_4:+75713336 Msa0522510:CDS
TATGTGTCTACACATCCATC+TGG 0.486728 3_4:+75713879 Msa0522510:three_prime_UTR
GAGTTCAGCTGCCGTGGAGT+TGG 0.487465 3_4:+75712814 Msa0522510:CDS
ATCAAACATTTGGTTTCGAA+AGG 0.487528 3_4:+75712917 Msa0522510:CDS
GGAGCAGCATTGTCGTCATT+GGG 0.488441 3_4:+75712241 Msa0522510:CDS
GGCTTTGGAAGAAACATTAG+TGG 0.489386 3_4:+75712716 Msa0522510:CDS
GAATTTGAAAAGAGATGAAG+AGG 0.490223 3_4:-75711258 None:intergenic
TTCTGTGAGTTCAGCTGCCG+TGG 0.490671 3_4:+75712808 Msa0522510:CDS
TTGAAAAGAGATGAAGAGGA+AGG 0.490950 3_4:-75711254 None:intergenic
CAATGTTGATGACCTTAAAG+AGG 0.492073 3_4:+75713234 Msa0522510:CDS
GGCTTTGTTTGGAAGTTTGG+AGG 0.494793 3_4:+75714110 Msa0522510:three_prime_UTR
CAAGTTTATATATTCTGGTA+AGG 0.495784 3_4:+75713999 Msa0522510:three_prime_UTR
TTTCAGAGCTTTGCGAGCAC+CGG 0.496728 3_4:+75712561 Msa0522510:CDS
AGGATGCTGATTATCGGTGC+TGG 0.497285 3_4:+75712875 Msa0522510:CDS
TGCTGGGAAGATGGGAAAGC+TGG 0.498604 3_4:+75712892 Msa0522510:CDS
TTTCCTCTTATTCTAATGAA+AGG 0.500542 3_4:-75713718 None:intergenic
GATTATCGGTGCTGGGAAGA+TGG 0.501802 3_4:+75712883 Msa0522510:CDS
AGTTATTATACTGTTGAGTA+GGG 0.503280 3_4:+75711068 Msa0522510:five_prime_UTR
TCAAAGCATGCATGTTCTCA+AGG 0.503890 3_4:-75713573 None:intergenic
CCTCTTTGACACCACGGTGT+TGG 0.505749 3_4:-75712425 None:intergenic
ATTGTGAATAGGATGCTTCA+TGG 0.507796 3_4:+75713496 Msa0522510:CDS
GAAAAGAGATGAAGAGGAAG+GGG 0.508126 3_4:-75711252 None:intergenic
TCACACCTTAAATGTTGCAT+TGG 0.511482 3_4:-75713520 None:intergenic
ATTTCTGTTCCTCGAAATGT+TGG 0.512769 3_4:+75713175 Msa0522510:CDS
GAGGAGCTCAAGAGCAGAGA+GGG 0.516677 3_4:-75711523 None:intergenic
ATTATCGGTGCTGGGAAGAT+GGG 0.517250 3_4:+75712884 Msa0522510:CDS
GAGTCTCTTGTATTGGGAGA+AGG 0.518033 3_4:+75712641 Msa0522510:CDS
TTCGAAAGGTTGCACAAGGA+TGG 0.522727 3_4:+75712931 Msa0522510:CDS
GCTGAGCTTGAGAAATGCTT+GGG 0.524284 3_4:+75713412 Msa0522510:CDS
ATGCAACATTTAAGGTGTGA+TGG 0.525826 3_4:+75713523 Msa0522510:CDS
CAGAGACTAATATTGCTGCT+GGG 0.527457 3_4:+75712780 Msa0522510:CDS
AATGCCAGGATGCTGATTAT+CGG 0.528010 3_4:+75712869 Msa0522510:CDS
CTTACCAGAATATATAAACT+TGG 0.528592 3_4:-75713998 None:intergenic
ACACATGAACCAACATTTCG+AGG 0.528910 3_4:-75713184 None:intergenic
TGAAAAGAGATGAAGAGGAA+GGG 0.530175 3_4:-75711253 None:intergenic
AGAAGGTCAAATTCTTGCAC+AGG 0.531198 3_4:+75712658 Msa0522510:CDS
ACCGGAGAAAGTGGTTGAAA+CGG 0.531801 3_4:-75711337 None:intergenic
AAGCTGTGGATGATCTTAGT+CGG 0.534663 3_4:+75713470 Msa0522510:CDS
GGAGCAGAAAGTTCGAGCTA+AGG 0.538367 3_4:+75713633 Msa0522510:CDS
GCTCAGTGTGCACACTGCTC+CGG 0.539155 3_4:+75712263 Msa0522510:CDS
TAGAAAAGCAATGGAAGCGC+AGG 0.539856 3_4:+75713285 Msa0522510:CDS
TGCAACATTTAAGGTGTGAT+GGG 0.541340 3_4:+75713524 Msa0522510:CDS
CAATTTGGGACCGGAGAAAG+TGG 0.542238 3_4:-75711346 None:intergenic
CCGTGGTGTCAAAGAGGTCA+TGG 0.542278 3_4:+75712431 Msa0522510:CDS
TTGTGTTTCTGAAGCAGATG+TGG 0.542350 3_4:+75713048 Msa0522510:CDS
GCTTTGTTTGGAAGTTTGGA+GGG 0.542456 3_4:+75714111 Msa0522510:three_prime_UTR
AAGCCTCGCATGATAATGCC+AGG 0.544469 3_4:+75712855 Msa0522510:CDS
TTCAAGCATGCAATAACTGT+CGG 0.546104 3_4:+75712743 Msa0522510:CDS
TTTGTTTGGAAGTTTGGAGG+GGG 0.550793 3_4:+75714113 Msa0522510:three_prime_UTR
TATTGGCCTAAAATTTGTCC+GGG 0.552136 3_4:+75713960 Msa0522510:three_prime_UTR
GGCTTCAGGTAGCTTCATAT+AGG 0.552546 3_4:-75712837 None:intergenic
AACCCAAAAGAGTGAGTGGA+AGG 0.554696 3_4:+75711197 Msa0522510:five_prime_UTR
AAACAGATATTTCAGTCTCT+AGG 0.555709 3_4:-75713609 None:intergenic
CATCTTGACTTGCTGGAGGA+AGG 0.557482 3_4:-75713126 None:intergenic
AACAGCAGAAGTCTCCTTGG+TGG 0.557580 3_4:+75713794 Msa0522510:three_prime_UTR
ATCGTCAATGAAGTTGGTGT+TGG 0.561448 3_4:-75713683 None:intergenic
TAGAGACTCCAATTTGGGAC+CGG 0.563889 3_4:-75711355 None:intergenic
TGAAACAGCAGAAGTCTCCT+TGG 0.565843 3_4:+75713791 Msa0522510:three_prime_UTR
AGCACCGATAATCAGCATCC+TGG 0.566229 3_4:-75712873 None:intergenic
GAACAAAACCAGAAGTGAGA+TGG 0.570201 3_4:+75713658 Msa0522510:exon
GGATGCTGATTATCGGTGCT+GGG 0.570581 3_4:+75712876 Msa0522510:CDS
AATTGAGAGCCTATGCTGAA+AGG 0.571766 3_4:+75713380 Msa0522510:CDS
CAAAGCATGCATGTTCTCAA+GGG 0.572276 3_4:-75713572 None:intergenic
TGATGACCTTAAAGAGGTTG+TGG 0.573814 3_4:+75713240 Msa0522510:CDS
AGGCCATTCTGCTTCCGGAA+TGG 0.575247 3_4:-75712307 None:intergenic
AAAGAAGACGCGGAAAGCTG+TGG 0.575501 3_4:+75713456 Msa0522510:CDS
CGACGACATATATCTCCATT+CGG 0.575634 3_4:-75712395 None:intergenic
CTCAAGAGCAGAGAGGGTGG+TGG 0.576095 3_4:-75711517 None:intergenic
TTGCCATTCCGGAAGCAGAA+TGG 0.576827 3_4:+75712304 Msa0522510:CDS
GCAGAAAGTTCGAGCTAAGG+TGG 0.577492 3_4:+75713636 Msa0522510:CDS
CCAGCAAGTCAAGATGTTGG+AGG 0.577979 3_4:+75713133 Msa0522510:CDS
GGATAAAACGCGCGGAACAC+AGG 0.578310 3_4:+75711123 Msa0522510:five_prime_UTR
TGGTATAATACAAAACCAGA+TGG 0.579042 3_4:-75713894 None:intergenic
CTTTGTTTGGAAGTTTGGAG+GGG 0.582964 3_4:+75714112 Msa0522510:three_prime_UTR
CACAACTCTGCAATAGCTCT+AGG 0.584214 3_4:-75712327 None:intergenic
GGATCGGCTTAGAAAAGCAA+TGG 0.585302 3_4:+75713276 Msa0522510:CDS
GAGAAATGCTTGGGTAAGAT+GGG 0.585895 3_4:+75713421 Msa0522510:CDS
TGCAATACGCGAAGAACTGA+AGG 0.590760 3_4:+75712985 Msa0522510:CDS
TCTGAGCACCTGCAACCGAA+TGG 0.593474 3_4:+75712380 Msa0522510:CDS
AACCCTGATCCTTTCAGCAT+AGG 0.597458 3_4:-75713389 None:intergenic
AGAGACTAATATTGCTGCTG+GGG 0.599145 3_4:+75712781 Msa0522510:CDS
TATTGCAGCAACTCTCTCCT+CGG 0.599628 3_4:-75712969 None:intergenic
CAAGTTGTCAAAGTTGGACA+AGG 0.600402 3_4:+75712686 Msa0522510:CDS
GAGCTCAAGAGCAGAGAGGG+TGG 0.603642 3_4:-75711520 None:intergenic
CCTCCAGCAAGTCAAGATGT+TGG 0.604438 3_4:+75713130 Msa0522510:CDS
TGGCACTAATTACAATTACC+CGG 0.608481 3_4:-75713978 None:intergenic
TGGTTTCGAAAGGTTGCACA+AGG 0.613006 3_4:+75712927 Msa0522510:CDS
ATGTGTATCGTCAATGAAGT+TGG 0.615558 3_4:-75713689 None:intergenic
TCGACGATAGAAGAGAGAGA+TGG 0.622617 3_4:+75711091 Msa0522510:five_prime_UTR
TGGCTGCCAACAAAGAGGAT+CGG 0.623928 3_4:+75713260 Msa0522510:CDS
CCAACACCGTGGTGTCAAAG+AGG 0.625380 3_4:+75712425 Msa0522510:CDS
AGCCTATGCTGAAAGGATCA+GGG 0.627363 3_4:+75713387 Msa0522510:CDS
AAATGTCGACGAAAAGGCGA+AGG 0.627830 3_4:-75713156 None:intergenic
GCAAAGCTCTGAAACAGGAA+CGG 0.637910 3_4:-75712552 None:intergenic
TAACAGGGTACACAAAGGAA+AGG 0.638046 3_4:+75712220 Msa0522510:intron
GTGTCAAAGAGGTCATGGAA+TGG 0.647540 3_4:+75712436 Msa0522510:CDS
CATCCTGGCATTATCATGCG+AGG 0.650328 3_4:-75712858 None:intergenic
CCATGACCTCTTTGACACCA+CGG 0.651376 3_4:-75712431 None:intergenic
GGTTGTGGCTGCCAACAAAG+AGG 0.659117 3_4:+75713255 Msa0522510:CDS
ACCCAAAAGAGTGAGTGGAA+GGG 0.663955 3_4:+75711198 Msa0522510:five_prime_UTR
CCAACATCTTGACTTGCTGG+AGG 0.669581 3_4:-75713130 None:intergenic
AACTTTAACAGGGTACACAA+AGG 0.670584 3_4:+75712215 Msa0522510:intron
TTAGGGTTCTCACTCAACAA+TGG 0.677893 3_4:+75711314 Msa0522510:exon
TGAGGAGCTCAAGAGCAGAG+AGG 0.684333 3_4:-75711524 None:intergenic
CTTCATATAGGCCAACTCCA+CGG 0.687445 3_4:-75712825 None:intergenic
AATCAATGGAAGCTCCACCA+AGG 0.691918 3_4:-75713808 None:intergenic
ATGATATCTCAAAGAAGACG+CGG 0.701193 3_4:+75713446 Msa0522510:CDS
GCTGTGGATGATCTTAGTCG+GGG 0.710260 3_4:+75713472 Msa0522510:CDS
AAGAGTGTGGATAAAACGCG+CGG 0.728313 3_4:+75711115 Msa0522510:five_prime_UTR
GGTTGTTGTCAATAGAACCG+AGG 0.729846 3_4:+75712952 Msa0522510:CDS
GTCGCTCTATCCCAACACCG+TGG 0.769259 3_4:+75712414 Msa0522510:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! AATTTAACCTTAAATTTCAT+CGG - chr3_4:75710998-75711017 None:intergenic 15.0%
!! TAAAATGATTAATCAAACAA+AGG - chr3_4:75711624-75711643 None:intergenic 15.0%
!! TTTATACAATTAACTTTAAC+AGG + chr3_4:75712204-75712223 Msa0522510:intron 15.0%
!! TTATACAATTAACTTTAACA+GGG + chr3_4:75712205-75712224 Msa0522510:intron 15.0%
!! ATTTATCGACAATTAATTGT+CGG - chr3_4:75710953-75710972 None:intergenic 20.0%
!!! TCTGAAAGTATATAATCTTT+TGG + chr3_4:75711757-75711776 Msa0522510:intron 20.0%
!! TTTCATAGTATTCACTATAA+AGG + chr3_4:75711872-75711891 Msa0522510:intron 20.0%
!! AGAAATATAACAAACAGAAA+AGG - chr3_4:75711977-75711996 None:intergenic 20.0%
!!! TGTTTGTTATATTTCTTAAG+TGG + chr3_4:75711981-75712000 Msa0522510:intron 20.0%
!! TTTATCAAAAGAAAGAAAGA+CGG + chr3_4:75712118-75712137 Msa0522510:intron 20.0%
!! GTATTTACTACGAATTATAT+TGG + chr3_4:75713943-75713962 Msa0522510:three_prime_UTR 20.0%
! AATTGTCGGTAAAGTTATAT+TGG - chr3_4:75710939-75710958 None:intergenic 25.0%
! TAGTTATTATACTGTTGAGT+AGG + chr3_4:75711067-75711086 Msa0522510:five_prime_UTR 25.0%
! AGTTATTATACTGTTGAGTA+GGG + chr3_4:75711068-75711087 Msa0522510:five_prime_UTR 25.0%
! TTTCCCAAAAACTGATAAAT+GGG - chr3_4:75711424-75711443 None:intergenic 25.0%
! TGTTGTTATCTCTAAACATA+TGG + chr3_4:75711663-75711682 Msa0522510:intron 25.0%
! TCTCTAAACATATGGATTTA+AGG + chr3_4:75711671-75711690 Msa0522510:intron 25.0%
! CTTGAATAGAATTAATCATC+TGG - chr3_4:75711800-75711819 None:intergenic 25.0%
! TGAAAAAAAAACATGTTTCC+TGG - chr3_4:75711857-75711876 None:intergenic 25.0%
!! GAGTTTGTTTAATTCACTTA+AGG + chr3_4:75711947-75711966 Msa0522510:intron 25.0%
! GTTATATTTCTTAAGTGGTT+CGG + chr3_4:75711986-75712005 Msa0522510:intron 25.0%
! TTATCAAAAGAAAGAAAGAC+GGG + chr3_4:75712119-75712138 Msa0522510:intron 25.0%
! TTTAATGTATCTGTTCTCTT+TGG + chr3_4:75712519-75712538 Msa0522510:intron 25.0%
!! CTTTGTTGTAAAGTAAAAAC+CGG - chr3_4:75712583-75712602 None:intergenic 25.0%
!!! GCTCTCAATTTTTTTATAGT+AGG - chr3_4:75713370-75713389 None:intergenic 25.0%
! TTTCCTTTCATTAGAATAAG+AGG + chr3_4:75713715-75713734 Msa0522510:three_prime_UTR 25.0%
! TTTCCTCTTATTCTAATGAA+AGG - chr3_4:75713721-75713740 None:intergenic 25.0%
! ACGATTTCATATCCTAAAAA+TGG - chr3_4:75713752-75713771 None:intergenic 25.0%
! CATAAAAATGTCTTCATTTC+TGG - chr3_4:75713917-75713936 None:intergenic 25.0%
! CTTACCAGAATATATAAACT+TGG - chr3_4:75714001-75714020 None:intergenic 25.0%
! CAAGTTTATATATTCTGGTA+AGG + chr3_4:75713999-75714018 Msa0522510:three_prime_UTR 25.0%
! GAGTCTATTATTGTGTTTAA+AGG + chr3_4:75714089-75714108 Msa0522510:three_prime_UTR 25.0%
TTAATCGCCGATGAAATTTA+AGG + chr3_4:75710988-75711007 Msa0522510:five_prime_UTR 30.0%
!! GAAAATTGCTTTTCACACTT+TGG - chr3_4:75711047-75711066 None:intergenic 30.0%
GAATTTGAAAAGAGATGAAG+AGG - chr3_4:75711261-75711280 None:intergenic 30.0%
AAGAAGATGAAGAAGATTTG+AGG - chr3_4:75711383-75711402 None:intergenic 30.0%
GTTTCCCAAAAACTGATAAA+TGG - chr3_4:75711425-75711444 None:intergenic 30.0%
!!! AATTCCTTTTTGAGTGAAAG+TGG - chr3_4:75711454-75711473 None:intergenic 30.0%
CAGAATTCTGATCAAACTAA+TGG + chr3_4:75711489-75711508 Msa0522510:CDS 30.0%
TGAAAGACGAATTCAATTCA+GGG - chr3_4:75711587-75711606 None:intergenic 30.0%
ATGAAAGACGAATTCAATTC+AGG - chr3_4:75711588-75711607 None:intergenic 30.0%
ACAACAAATTAAGACAGAGA+GGG - chr3_4:75711649-75711668 None:intergenic 30.0%
AACAACAAATTAAGACAGAG+AGG - chr3_4:75711650-75711669 None:intergenic 30.0%
AACATGTTTCCTGGTAAATA+GGG - chr3_4:75711848-75711867 None:intergenic 30.0%
AAACATGTTTCCTGGTAAAT+AGG - chr3_4:75711849-75711868 None:intergenic 30.0%
!! TTCCAAAGATTTGAAGCTTT+TGG + chr3_4:75712049-75712068 Msa0522510:intron 30.0%
!! TCCAAAGATTTGAAGCTTTT+GGG + chr3_4:75712050-75712069 Msa0522510:intron 30.0%
! CTTTTGATAAATAACCCTCT+AGG - chr3_4:75712109-75712128 None:intergenic 30.0%
ATGCACGACAAATATGATTT+AGG - chr3_4:75712490-75712509 None:intergenic 30.0%
TACTTGAAAAAGATGTTGTG+TGG - chr3_4:75712609-75712628 None:intergenic 30.0%
! ATCAAACATTTGGTTTCGAA+AGG + chr3_4:75712917-75712936 Msa0522510:CDS 30.0%
CGTCATCTTTCATGAATAAT+GGG - chr3_4:75713099-75713118 None:intergenic 30.0%
ACGTCATCTTTCATGAATAA+TGG - chr3_4:75713100-75713119 None:intergenic 30.0%
! AGTTGAAACAATTTGAAGCT+TGG + chr3_4:75713323-75713342 Msa0522510:CDS 30.0%
AAACAGATATTTCAGTCTCT+AGG - chr3_4:75713612-75713631 None:intergenic 30.0%
! AGAGACTGAAATATCTGTTT+TGG + chr3_4:75713612-75713631 Msa0522510:CDS 30.0%
TCATATCCTAAAAATGGTGA+GGG - chr3_4:75713746-75713765 None:intergenic 30.0%
TTCATATCCTAAAAATGGTG+AGG - chr3_4:75713747-75713766 None:intergenic 30.0%
TGGTATAATACAAAACCAGA+TGG - chr3_4:75713897-75713916 None:intergenic 30.0%
! ATATTGGCCTAAAATTTGTC+CGG + chr3_4:75713959-75713978 Msa0522510:three_prime_UTR 30.0%
AGTGCCAAGTTTATATATTC+TGG + chr3_4:75713994-75714013 Msa0522510:three_prime_UTR 30.0%
!! TTGTGTTTAAAGGCTTTGTT+TGG + chr3_4:75714099-75714118 Msa0522510:three_prime_UTR 30.0%
ATATTGCGATTTGTCTCTCT+GGG - chr3_4:75711159-75711178 None:intergenic 35.0%
TATATTGCGATTTGTCTCTC+TGG - chr3_4:75711160-75711179 None:intergenic 35.0%
TGAAAAGAGATGAAGAGGAA+GGG - chr3_4:75711256-75711275 None:intergenic 35.0%
TTGAAAAGAGATGAAGAGGA+AGG - chr3_4:75711257-75711276 None:intergenic 35.0%
TCTTCATTCTCCTTCAATCT+AGG + chr3_4:75711284-75711303 Msa0522510:five_prime_UTR 35.0%
CTTCATTCTCCTTCAATCTA+GGG + chr3_4:75711285-75711304 Msa0522510:five_prime_UTR 35.0%
AGGAATAGAGACTCCAATTT+GGG - chr3_4:75711363-75711382 None:intergenic 35.0%
AATCTTCTTCATCTTCTTCG+AGG + chr3_4:75711385-75711404 Msa0522510:CDS 35.0%
CCAAAAACTGATAAATGGGT+GGG - chr3_4:75711420-75711439 None:intergenic 35.0%
! CCACCCATTTATCAGTTTTT+GGG + chr3_4:75711418-75711437 Msa0522510:CDS 35.0%
!! TTTTGAGTGAAAGTGGTTCT+GGG - chr3_4:75711447-75711466 None:intergenic 35.0%
!!! TTTTTGAGTGAAAGTGGTTC+TGG - chr3_4:75711448-75711467 None:intergenic 35.0%
AGAACCACTTTCACTCAAAA+AGG + chr3_4:75711447-75711466 Msa0522510:CDS 35.0%
TCCCAAAAGCTTCAAATCTT+TGG - chr3_4:75712054-75712073 None:intergenic 35.0%
AACTTTAACAGGGTACACAA+AGG + chr3_4:75712215-75712234 Msa0522510:intron 35.0%
! AGTTTTTCACGCATTTCTAC+CGG - chr3_4:75712285-75712304 None:intergenic 35.0%
!!! CATCTTTTTCAAGTATCAGC+TGG + chr3_4:75712614-75712633 Msa0522510:CDS 35.0%
GTTAAGCAAGTTGTCAAAGT+TGG + chr3_4:75712680-75712699 Msa0522510:CDS 35.0%
AAAGTTGGACAAGGAGTTAA+CGG + chr3_4:75712695-75712714 Msa0522510:CDS 35.0%
TTCAAGCATGCAATAACTGT+CGG + chr3_4:75712743-75712762 Msa0522510:CDS 35.0%
ATGCAATAACTGTCGGAAAA+AGG + chr3_4:75712750-75712769 Msa0522510:CDS 35.0%
TGCAATAACTGTCGGAAAAA+GGG + chr3_4:75712751-75712770 Msa0522510:CDS 35.0%
AAAGCTGGTCATCAAACATT+TGG + chr3_4:75712907-75712926 Msa0522510:CDS 35.0%
ATTTCTGTTCCTCGAAATGT+TGG + chr3_4:75713175-75713194 Msa0522510:CDS 35.0%
!! CAATGTTGATGACCTTAAAG+AGG + chr3_4:75713234-75713253 Msa0522510:CDS 35.0%
ATGATATCTCAAAGAAGACG+CGG + chr3_4:75713446-75713465 Msa0522510:CDS 35.0%
ATTGTGAATAGGATGCTTCA+TGG + chr3_4:75713496-75713515 Msa0522510:CDS 35.0%
ATGGTCCAATGCAACATTTA+AGG + chr3_4:75713515-75713534 Msa0522510:CDS 35.0%
TCACACCTTAAATGTTGCAT+TGG - chr3_4:75713523-75713542 None:intergenic 35.0%
! ATGCAACATTTAAGGTGTGA+TGG + chr3_4:75713523-75713542 Msa0522510:CDS 35.0%
! TGCAACATTTAAGGTGTGAT+GGG + chr3_4:75713524-75713543 Msa0522510:CDS 35.0%
ATGTGTATCGTCAATGAAGT+TGG - chr3_4:75713692-75713711 None:intergenic 35.0%
! TATTGGCCTAAAATTTGTCC+GGG + chr3_4:75713960-75713979 Msa0522510:three_prime_UTR 35.0%
! CAATTACCCGGACAAATTTT+AGG - chr3_4:75713969-75713988 None:intergenic 35.0%
TGGCACTAATTACAATTACC+CGG - chr3_4:75713981-75714000 None:intergenic 35.0%
!! AAAGGCTTTGTTTGGAAGTT+TGG + chr3_4:75714107-75714126 Msa0522510:three_prime_UTR 35.0%
GAAAAACCCAAAAGAGTGAG+TGG + chr3_4:75711193-75711212 Msa0522510:five_prime_UTR 40.0%
GAAAAGAGATGAAGAGGAAG+GGG - chr3_4:75711255-75711274 None:intergenic 40.0%
! TTCTCCTTCAATCTAGGGTT+AGG + chr3_4:75711290-75711309 Msa0522510:five_prime_UTR 40.0%
! TCTCCTTCAATCTAGGGTTA+GGG + chr3_4:75711291-75711310 Msa0522510:five_prime_UTR 40.0%
TAACCCTAACCCTAGATTGA+AGG - chr3_4:75711297-75711316 None:intergenic 40.0%
! TTCAATCTAGGGTTAGGGTT+AGG + chr3_4:75711296-75711315 Msa0522510:five_prime_UTR 40.0%
! TCAATCTAGGGTTAGGGTTA+GGG + chr3_4:75711297-75711316 Msa0522510:five_prime_UTR 40.0%
TTAGGGTTCTCACTCAACAA+TGG + chr3_4:75711314-75711333 Msa0522510:exon 40.0%
GAGGAATAGAGACTCCAATT+TGG - chr3_4:75711364-75711383 None:intergenic 40.0%
AACTGATAAATGGGTGGGAA+TGG - chr3_4:75711415-75711434 None:intergenic 40.0%
! CCCACCCATTTATCAGTTTT+TGG + chr3_4:75711417-75711436 Msa0522510:CDS 40.0%
CCCAAAAACTGATAAATGGG+TGG - chr3_4:75711421-75711440 None:intergenic 40.0%
! TATCAGCTGCAGAAGTTTTG+AGG - chr3_4:75711545-75711564 None:intergenic 40.0%
! CGGGATTGCATGTTTTTCAT+TGG + chr3_4:75712138-75712157 Msa0522510:intron 40.0%
TAACAGGGTACACAAAGGAA+AGG + chr3_4:75712220-75712239 Msa0522510:intron 40.0%
ATATATCTCCATTCGGTTGC+AGG - chr3_4:75712391-75712410 None:intergenic 40.0%
CGACGACATATATCTCCATT+CGG - chr3_4:75712398-75712417 None:intergenic 40.0%
! TGGTCTTGAGTCTCTTGTAT+TGG + chr3_4:75712634-75712653 Msa0522510:CDS 40.0%
GGTCTTGAGTCTCTTGTATT+GGG + chr3_4:75712635-75712654 Msa0522510:CDS 40.0%
AGAAGGTCAAATTCTTGCAC+AGG + chr3_4:75712658-75712677 Msa0522510:CDS 40.0%
CAAGTTGTCAAAGTTGGACA+AGG + chr3_4:75712686-75712705 Msa0522510:CDS 40.0%
!! GGCTTTGGAAGAAACATTAG+TGG + chr3_4:75712716-75712735 Msa0522510:CDS 40.0%
CAGAGACTAATATTGCTGCT+GGG + chr3_4:75712780-75712799 Msa0522510:CDS 40.0%
AGAGACTAATATTGCTGCTG+GGG + chr3_4:75712781-75712800 Msa0522510:CDS 40.0%
! AATGCCAGGATGCTGATTAT+CGG + chr3_4:75712869-75712888 Msa0522510:CDS 40.0%
!! CAAGAGAGCATTTCTGAAAG+AGG - chr3_4:75713031-75713050 None:intergenic 40.0%
!! TTGTGTTTCTGAAGCAGATG+TGG + chr3_4:75713048-75713067 Msa0522510:CDS 40.0%
GAACAGAAATGTCGACGAAA+AGG - chr3_4:75713165-75713184 None:intergenic 40.0%
ACACATGAACCAACATTTCG+AGG - chr3_4:75713187-75713206 None:intergenic 40.0%
TGATGACCTTAAAGAGGTTG+TGG + chr3_4:75713240-75713259 Msa0522510:CDS 40.0%
AATTGAGAGCCTATGCTGAA+AGG + chr3_4:75713380-75713399 Msa0522510:CDS 40.0%
TGAGAAATGCTTGGGTAAGA+TGG + chr3_4:75713420-75713439 Msa0522510:CDS 40.0%
GAGAAATGCTTGGGTAAGAT+GGG + chr3_4:75713421-75713440 Msa0522510:CDS 40.0%
AAGCTGTGGATGATCTTAGT+CGG + chr3_4:75713470-75713489 Msa0522510:CDS 40.0%
!! TTAGTCGGGGTATTGTGAAT+AGG + chr3_4:75713485-75713504 Msa0522510:CDS 40.0%
CAAAGCATGCATGTTCTCAA+GGG - chr3_4:75713575-75713594 None:intergenic 40.0%
TCAAAGCATGCATGTTCTCA+AGG - chr3_4:75713576-75713595 None:intergenic 40.0%
GAACAAAACCAGAAGTGAGA+TGG + chr3_4:75713658-75713677 Msa0522510:exon 40.0%
!! ATCGTCAATGAAGTTGGTGT+TGG - chr3_4:75713686-75713705 None:intergenic 40.0%
!! GAAACACCCTCACCATTTTT+AGG + chr3_4:75713737-75713756 Msa0522510:three_prime_UTR 40.0%
CGCATAGACACAACAATCAA+TGG - chr3_4:75713825-75713844 None:intergenic 40.0%
TCTGCTTGTCCAAACTCATT+TGG + chr3_4:75713845-75713864 Msa0522510:three_prime_UTR 40.0%
CTGCTTGTCCAAACTCATTT+GGG + chr3_4:75713846-75713865 Msa0522510:three_prime_UTR 40.0%
CCAAAAAGCCCAAATGAGTT+TGG - chr3_4:75713857-75713876 None:intergenic 40.0%
! CCAAACTCATTTGGGCTTTT+TGG + chr3_4:75713854-75713873 Msa0522510:three_prime_UTR 40.0%
TATGTGTCTACACATCCATC+TGG + chr3_4:75713879-75713898 Msa0522510:three_prime_UTR 40.0%
!!! TCTGTTTTTATGCACTGCTG+TGG + chr3_4:75714055-75714074 Msa0522510:three_prime_UTR 40.0%
!! GCTTTGTTTGGAAGTTTGGA+GGG + chr3_4:75714111-75714130 Msa0522510:three_prime_UTR 40.0%
! CTTTGTTTGGAAGTTTGGAG+GGG + chr3_4:75714112-75714131 Msa0522510:three_prime_UTR 40.0%
TTTGTTTGGAAGTTTGGAGG+GGG + chr3_4:75714113-75714132 Msa0522510:three_prime_UTR 40.0%
TCGACGATAGAAGAGAGAGA+TGG + chr3_4:75711091-75711110 Msa0522510:five_prime_UTR 45.0%
AGAGAGAGATGGAAAGAGTG+TGG + chr3_4:75711102-75711121 Msa0522510:five_prime_UTR 45.0%
! AAGAGTGTGGATAAAACGCG+CGG + chr3_4:75711115-75711134 Msa0522510:five_prime_UTR 45.0%
TTGTCTCTCTGGGTTCTCAT+TGG - chr3_4:75711149-75711168 None:intergenic 45.0%
AACCCAAAAGAGTGAGTGGA+AGG + chr3_4:75711197-75711216 Msa0522510:five_prime_UTR 45.0%
ACCCAAAAGAGTGAGTGGAA+GGG + chr3_4:75711198-75711217 Msa0522510:five_prime_UTR 45.0%
! ACCCTTCCACTCACTCTTTT+GGG - chr3_4:75711202-75711221 None:intergenic 45.0%
ACCGGAGAAAGTGGTTGAAA+CGG - chr3_4:75711340-75711359 None:intergenic 45.0%
! TAGAGACTCCAATTTGGGAC+CGG - chr3_4:75711358-75711377 None:intergenic 45.0%
CAGAGATAAAGTGCAGTAGC+AGG - chr3_4:75711741-75711760 None:intergenic 45.0%
ATTGCAGCACCCTATTTACC+AGG + chr3_4:75711836-75711855 Msa0522510:intron 45.0%
!!! TTTGAAGCTTTTGGGACCTG+TGG + chr3_4:75712058-75712077 Msa0522510:intron 45.0%
! TGGTGATATCTAGAGCCTAG+AGG + chr3_4:75712091-75712110 Msa0522510:intron 45.0%
! GGTGATATCTAGAGCCTAGA+GGG + chr3_4:75712092-75712111 Msa0522510:intron 45.0%
GCGTGAAAAACTTGCCATTC+CGG + chr3_4:75712293-75712312 Msa0522510:CDS 45.0%
CACAACTCTGCAATAGCTCT+AGG - chr3_4:75712330-75712349 None:intergenic 45.0%
GTGTCAAAGAGGTCATGGAA+TGG + chr3_4:75712436-75712455 Msa0522510:CDS 45.0%
!! GCAAAGCTCTGAAACAGGAA+CGG - chr3_4:75712555-75712574 None:intergenic 45.0%
GAGTCTCTTGTATTGGGAGA+AGG + chr3_4:75712641-75712660 Msa0522510:CDS 45.0%
GCAGAGACTAATATTGCTGC+TGG + chr3_4:75712779-75712798 Msa0522510:CDS 45.0%
CTTCATATAGGCCAACTCCA+CGG - chr3_4:75712828-75712847 None:intergenic 45.0%
GGCTTCAGGTAGCTTCATAT+AGG - chr3_4:75712840-75712859 None:intergenic 45.0%
!! ATTATCGGTGCTGGGAAGAT+GGG + chr3_4:75712884-75712903 Msa0522510:CDS 45.0%
TGGTTTCGAAAGGTTGCACA+AGG + chr3_4:75712927-75712946 Msa0522510:CDS 45.0%
TTCGAAAGGTTGCACAAGGA+TGG + chr3_4:75712931-75712950 Msa0522510:CDS 45.0%
GGTTGTTGTCAATAGAACCG+AGG + chr3_4:75712952-75712971 Msa0522510:CDS 45.0%
TATTGCAGCAACTCTCTCCT+CGG - chr3_4:75712972-75712991 None:intergenic 45.0%
TGCAATACGCGAAGAACTGA+AGG + chr3_4:75712985-75713004 Msa0522510:CDS 45.0%
! TGGGTTTTCTGATGCTGTAC+TGG - chr3_4:75713080-75713099 None:intergenic 45.0%
AAATGTCGACGAAAAGGCGA+AGG - chr3_4:75713159-75713178 None:intergenic 45.0%
TCTAAGCCGATCCTCTTTGT+TGG - chr3_4:75713269-75713288 None:intergenic 45.0%
! GGATCGGCTTAGAAAAGCAA+TGG + chr3_4:75713276-75713295 Msa0522510:CDS 45.0%
! TAGAAAAGCAATGGAAGCGC+AGG + chr3_4:75713285-75713304 Msa0522510:CDS 45.0%
AGCCTATGCTGAAAGGATCA+GGG + chr3_4:75713387-75713406 Msa0522510:CDS 45.0%
AACCCTGATCCTTTCAGCAT+AGG - chr3_4:75713392-75713411 None:intergenic 45.0%
TGCTGAGCTTGAGAAATGCT+TGG + chr3_4:75713411-75713430 Msa0522510:CDS 45.0%
GCTGAGCTTGAGAAATGCTT+GGG + chr3_4:75713412-75713431 Msa0522510:CDS 45.0%
AGCTGTGGATGATCTTAGTC+GGG + chr3_4:75713471-75713490 Msa0522510:CDS 45.0%
GTTCTCAAGGGTCTCAGTTA+GGG - chr3_4:75713563-75713582 None:intergenic 45.0%
TGTTCTCAAGGGTCTCAGTT+AGG - chr3_4:75713564-75713583 None:intergenic 45.0%
TGTTGGATCCATCTCACTTC+TGG - chr3_4:75713669-75713688 None:intergenic 45.0%
TGAAACAGCAGAAGTCTCCT+TGG + chr3_4:75713791-75713810 Msa0522510:three_prime_UTR 45.0%
AATCAATGGAAGCTCCACCA+AGG - chr3_4:75713811-75713830 None:intergenic 45.0%
!! GGCTTTGTTTGGAAGTTTGG+AGG + chr3_4:75714110-75714129 Msa0522510:three_prime_UTR 45.0%
! GACCCTTCCACTCACTCTTT+TGG - chr3_4:75711203-75711222 None:intergenic 50.0%
GCCGTTTCAACCACTTTCTC+CGG + chr3_4:75711336-75711355 Msa0522510:CDS 50.0%
! CAATTTGGGACCGGAGAAAG+TGG - chr3_4:75711349-75711368 None:intergenic 50.0%
CACTTTCTCCGGTCCCAAAT+TGG + chr3_4:75711347-75711366 Msa0522510:CDS 50.0%
!!! CTTTTGGGACCTGTGGTTGA+TGG + chr3_4:75712065-75712084 Msa0522510:intron 50.0%
TCACCACAACCATCAACCAC+AGG - chr3_4:75712077-75712096 None:intergenic 50.0%
AGGAGCAGCATTGTCGTCAT+TGG + chr3_4:75712240-75712259 Msa0522510:CDS 50.0%
GGAGCAGCATTGTCGTCATT+GGG + chr3_4:75712241-75712260 Msa0522510:CDS 50.0%
TTGCCATTCCGGAAGCAGAA+TGG + chr3_4:75712304-75712323 Msa0522510:CDS 50.0%
CTCTTTGACACCACGGTGTT+GGG - chr3_4:75712427-75712446 None:intergenic 50.0%
CCATGACCTCTTTGACACCA+CGG - chr3_4:75712434-75712453 None:intergenic 50.0%
!! TGCTCGCAAAGCTCTGAAAC+AGG - chr3_4:75712560-75712579 None:intergenic 50.0%
TTTCAGAGCTTTGCGAGCAC+CGG + chr3_4:75712561-75712580 Msa0522510:CDS 50.0%
GGACAAGGAGTTAACGGCTT+TGG + chr3_4:75712701-75712720 Msa0522510:CDS 50.0%
GCATTATCATGCGAGGCTTC+AGG - chr3_4:75712854-75712873 None:intergenic 50.0%
! AAGCCTCGCATGATAATGCC+AGG + chr3_4:75712855-75712874 Msa0522510:CDS 50.0%
CATCCTGGCATTATCATGCG+AGG - chr3_4:75712861-75712880 None:intergenic 50.0%
!! AGCACCGATAATCAGCATCC+TGG - chr3_4:75712876-75712895 None:intergenic 50.0%
! AGGATGCTGATTATCGGTGC+TGG + chr3_4:75712875-75712894 Msa0522510:CDS 50.0%
! GGATGCTGATTATCGGTGCT+GGG + chr3_4:75712876-75712895 Msa0522510:CDS 50.0%
!! GATTATCGGTGCTGGGAAGA+TGG + chr3_4:75712883-75712902 Msa0522510:CDS 50.0%
!! CATCTTGACTTGCTGGAGGA+AGG - chr3_4:75713129-75713148 None:intergenic 50.0%
!! CCAACATCTTGACTTGCTGG+AGG - chr3_4:75713133-75713152 None:intergenic 50.0%
CCTCCAGCAAGTCAAGATGT+TGG + chr3_4:75713130-75713149 Msa0522510:CDS 50.0%
!! CCTCCAACATCTTGACTTGC+TGG - chr3_4:75713136-75713155 None:intergenic 50.0%
CCAGCAAGTCAAGATGTTGG+AGG + chr3_4:75713133-75713152 Msa0522510:CDS 50.0%
TGGCAGCCACAACCTCTTTA+AGG - chr3_4:75713249-75713268 None:intergenic 50.0%
TGGCTGCCAACAAAGAGGAT+CGG + chr3_4:75713260-75713279 Msa0522510:CDS 50.0%
GAGCCTATGCTGAAAGGATC+AGG + chr3_4:75713386-75713405 Msa0522510:CDS 50.0%
AAAGAAGACGCGGAAAGCTG+TGG + chr3_4:75713456-75713475 Msa0522510:CDS 50.0%
GCTGTGGATGATCTTAGTCG+GGG + chr3_4:75713472-75713491 Msa0522510:CDS 50.0%
CAAGGGTCTCAGTTAGGGTT+CGG - chr3_4:75713558-75713577 None:intergenic 50.0%
GGAGCAGAAAGTTCGAGCTA+AGG + chr3_4:75713633-75713652 Msa0522510:CDS 50.0%
GCAGAAAGTTCGAGCTAAGG+TGG + chr3_4:75713636-75713655 Msa0522510:CDS 50.0%
AACAGCAGAAGTCTCCTTGG+TGG + chr3_4:75713794-75713813 Msa0522510:three_prime_UTR 50.0%
TTGGAAGTTTGGAGGGGGAA+TGG + chr3_4:75714118-75714137 Msa0522510:three_prime_UTR 50.0%
GGATAAAACGCGCGGAACAC+AGG + chr3_4:75711123-75711142 Msa0522510:five_prime_UTR 55.0%
GAGGAGCTCAAGAGCAGAGA+GGG - chr3_4:75711526-75711545 None:intergenic 55.0%
TGAGGAGCTCAAGAGCAGAG+AGG - chr3_4:75711527-75711546 None:intergenic 55.0%
!! GGACCTGTGGTTGATGGTTG+TGG + chr3_4:75712071-75712090 Msa0522510:intron 55.0%
AGGCCATTCTGCTTCCGGAA+TGG - chr3_4:75712310-75712329 None:intergenic 55.0%
! GCTCTAGGCCATTCTGCTTC+CGG - chr3_4:75712315-75712334 None:intergenic 55.0%
TCTGAGCACCTGCAACCGAA+TGG + chr3_4:75712380-75712399 Msa0522510:CDS 55.0%
CCTCTTTGACACCACGGTGT+TGG - chr3_4:75712428-75712447 None:intergenic 55.0%
! CCAACACCGTGGTGTCAAAG+AGG + chr3_4:75712425-75712444 Msa0522510:CDS 55.0%
! CCGTGGTGTCAAAGAGGTCA+TGG + chr3_4:75712431-75712450 Msa0522510:CDS 55.0%
TTCTGTGAGTTCAGCTGCCG+TGG + chr3_4:75712808-75712827 Msa0522510:CDS 55.0%
TGCTGGGAAGATGGGAAAGC+TGG + chr3_4:75712892-75712911 Msa0522510:CDS 55.0%
GGTTGTGGCTGCCAACAAAG+AGG + chr3_4:75713255-75713274 Msa0522510:CDS 55.0%
! ATGGAAGCGCAGGCGATCAT+TGG + chr3_4:75713295-75713314 Msa0522510:CDS 55.0%
TGAAGCTTGGAGAGACTCGC+TGG + chr3_4:75713336-75713355 Msa0522510:CDS 55.0%
TGCACTGCTGTGGTTGCTCT+TGG + chr3_4:75714065-75714084 Msa0522510:three_prime_UTR 55.0%
CTCAAGAGCAGAGAGGGTGG+TGG - chr3_4:75711520-75711539 None:intergenic 60.0%
GAGCTCAAGAGCAGAGAGGG+TGG - chr3_4:75711523-75711542 None:intergenic 60.0%
GCTCAGTGTGCACACTGCTC+CGG + chr3_4:75712263-75712282 Msa0522510:CDS 60.0%
GTCGCTCTATCCCAACACCG+TGG + chr3_4:75712414-75712433 Msa0522510:CDS 60.0%
GAGTTCAGCTGCCGTGGAGT+TGG + chr3_4:75712814-75712833 Msa0522510:CDS 60.0%
Chromosome Type Strat End Strand Name
chr3_4 gene 75710889 75714155 75710889 ID=Msa0522510;Name=Msa0522510
chr3_4 mRNA 75710889 75714155 75710889 ID=Msa0522510-mRNA-1;Parent=Msa0522510;Name=Msa0522510-mRNA-1;_AED=0.00;_eAED=0.00;_QI=444|1|1|1|1|1|3|480|534
chr3_4 exon 75710889 75711564 75710889 ID=Msa0522510-mRNA-1:exon:21721;Parent=Msa0522510-mRNA-1
chr3_4 exon 75712226 75712467 75712226 ID=Msa0522510-mRNA-1:exon:21722;Parent=Msa0522510-mRNA-1
chr3_4 exon 75712545 75714155 75712545 ID=Msa0522510-mRNA-1:exon:21723;Parent=Msa0522510-mRNA-1
chr3_4 five_prime_UTR 75710889 75711332 75710889 ID=Msa0522510-mRNA-1:five_prime_utr;Parent=Msa0522510-mRNA-1
chr3_4 CDS 75711333 75711564 75711333 ID=Msa0522510-mRNA-1:cds;Parent=Msa0522510-mRNA-1
chr3_4 CDS 75712226 75712467 75712226 ID=Msa0522510-mRNA-1:cds;Parent=Msa0522510-mRNA-1
chr3_4 CDS 75712545 75713675 75712545 ID=Msa0522510-mRNA-1:cds;Parent=Msa0522510-mRNA-1
chr3_4 three_prime_UTR 75713676 75714155 75713676 ID=Msa0522510-mRNA-1:three_prime_utr;Parent=Msa0522510-mRNA-1
Gene Sequence

>Msa0522510

ATGGCCGTTTCAACCACTTTCTCCGGTCCCAAATTGGAGTCTCTATTCCTCAAATCTTCTTCATCTTCTTCGAGGCTATCCATTCCCACCCATTTATCAGTTTTTGGGAAACCCAGAACCACTTTCACTCAAAAAGGAATTATTCGATGTGATGCTCAGAATTCTGATCAAACTAATGGTAGCACCACCACCCTCTCTGCTCTTGAGCTCCTCAAAACTTCTGCAGCTGATAGGTACACAAAGGAAAGGAGCAGCATTGTCGTCATTGGGCTCAGTGTGCACACTGCTCCGGTAGAAATGCGTGAAAAACTTGCCATTCCGGAAGCAGAATGGCCTAGAGCTATTGCAGAGTTGTGCAGTCTCAATCATATTGAAGAAGCAGCTGTTCTGAGCACCTGCAACCGAATGGAGATATATGTCGTCGCTCTATCCCAACACCGTGGTGTCAAAGAGGTCATGGAATGGATGTCAAAAACAAGTTCCGTTCCTGTTTCAGAGCTTTGCGAGCACCGGTTTTTACTTTACAACAAAGATGCCACACAACATCTTTTTCAAGTATCAGCTGGTCTTGAGTCTCTTGTATTGGGAGAAGGTCAAATTCTTGCACAGGTTAAGCAAGTTGTCAAAGTTGGACAAGGAGTTAACGGCTTTGGAAGAAACATTAGTGGTCTATTCAAGCATGCAATAACTGTCGGAAAAAGGGTTAGAGCAGAGACTAATATTGCTGCTGGGGCAGTTTCTGTGAGTTCAGCTGCCGTGGAGTTGGCCTATATGAAGCTACCTGAAGCCTCGCATGATAATGCCAGGATGCTGATTATCGGTGCTGGGAAGATGGGAAAGCTGGTCATCAAACATTTGGTTTCGAAAGGTTGCACAAGGATGGTTGTTGTCAATAGAACCGAGGAGAGAGTTGCTGCAATACGCGAAGAACTGAAGGATATTGAAATAATTTACAAACCTCTTTCAGAAATGCTCTCTTGTGTTTCTGAAGCAGATGTGGTATTCACCAGTACAGCATCAGAAAACCCATTATTCATGAAAGATGACGTCAAAGACCTTCCTCCAGCAAGTCAAGATGTTGGAGGCCTTCGCCTTTTCGTCGACATTTCTGTTCCTCGAAATGTTGGTTCATGTGTCTCAGATATTGAATCTGTTCGAGTTTACAATGTTGATGACCTTAAAGAGGTTGTGGCTGCCAACAAAGAGGATCGGCTTAGAAAAGCAATGGAAGCGCAGGCGATCATTGGTGAAGAGTTGAAACAATTTGAAGCTTGGAGAGACTCGCTGGAAACTGTTCCTACTATAAAAAAATTGAGAGCCTATGCTGAAAGGATCAGGGTTGCTGAGCTTGAGAAATGCTTGGGTAAGATGGGTGATGATATCTCAAAGAAGACGCGGAAAGCTGTGGATGATCTTAGTCGGGGTATTGTGAATAGGATGCTTCATGGTCCAATGCAACATTTAAGGTGTGATGGGAGTGACGACCGAACCCTAACTGAGACCCTTGAGAACATGCATGCTTTGAATAGAATGTTCAGCCTAGAGACTGAAATATCTGTTTTGGAGCAGAAAGTTCGAGCTAAGGTGGAACAAAACCAGAAGTGA
Protein sequence

>Msa0522510

MAVSTTFSGPKLESLFLKSSSSSSRLSIPTHLSVFGKPRTTFTQKGIIRCDAQNSDQTNGSTTTLSALELLKTSAADRYTKERSSIVVIGLSVHTAPVEMREKLAIPEAEWPRAIAELCSLNHIEEAAVLSTCNRMEIYVVALSQHRGVKEVMEWMSKTSSVPVSELCEHRFLLYNKDATQHLFQVSAGLESLVLGEGQILAQVKQVVKVGQGVNGFGRNISGLFKHAITVGKRVRAETNIAAGAVSVSSAAVELAYMKLPEASHDNARMLIIGAGKMGKLVIKHLVSKGCTRMVVVNRTEERVAAIREELKDIEIIYKPLSEMLSCVSEADVVFTSTASENPLFMKDDVKDLPPASQDVGGLRLFVDISVPRNVGSCVSDIESVRVYNVDDLKEVVAANKEDRLRKAMEAQAIIGEELKQFEAWRDSLETVPTIKKLRAYAERIRVAELEKCLGKMGDDISKKTRKAVDDLSRGIVNRMLHGPMQHLRCDGSDDRTLTETLENMHALNRMFSLETEISVLEQKVRAKVEQNQK*