AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa1381870


Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa1381870 MtrunA17_Chr4g0049291 98.286 525 9 0 1 525 1 525 0.0 1056
Msa1381870 MtrunA17_Chr3g0135201 85.193 466 68 1 58 523 53 517 0.0 829
Msa1381870 MtrunA17_Chr1g0152061 78.394 523 109 4 5 525 4 524 0.0 805
Msa1381870 MtrunA17_Chr6g0463581 77.387 199 45 0 327 525 1 199 9.96e-108 319
Msa1381870 MtrunA17_Chr6g0463781 79.459 185 38 0 307 491 21 205 3.62e-100 301
Msa1381870 MtrunA17_Chr6g0463601 76.344 186 32 4 1 179 1 181 6.97e-89 270
Msa1381870 MtrunA17_Chr6g0463751 85.859 99 14 0 81 179 38 136 1.05e-57 188
Msa1381870 MtrunA17_Chr5g0411591 92.857 84 6 0 400 483 35 118 1.51e-47 161
Msa1381870 MtrunA17_Chr7g0240231 86.905 84 11 0 398 481 33 116 1.13e-42 148
Msa1381870 MtrunA17_Chr6g0463771 69.072 97 30 0 232 328 11 107 8.12e-41 144
Msa1381870 MtrunA17_Chr6g0463591 82.895 76 13 0 232 307 5 80 2.06e-39 138
Msa1381870 MtrunA17_Chr6g0463761 86.207 58 8 0 176 233 24 81 1.87e-28 108
Msa1381870 MtrunA17_Chr6g0463741 62.069 87 21 4 1 80 1 82 1.55e-21 89.4
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa1381870 AT1G58440.1 77.624 505 106 4 21 523 24 523 0.0 805
Msa1381870 AT4G37760.1 74.563 515 120 2 6 520 11 514 0.0 768
Msa1381870 AT2G22830.1 73.077 520 130 5 4 523 76 585 0.0 752
Msa1381870 AT5G24150.1 51.335 487 233 3 37 520 23 508 3.34e-180 516
Msa1381870 AT5G24160.1 49.187 492 240 5 33 520 24 509 1.17e-171 495
Msa1381870 AT5G24150.2 51.288 466 223 3 37 499 23 487 9.27e-171 491
Msa1381870 AT5G24140.1 45.597 511 261 5 15 520 12 510 5.70e-161 468
Msa1381870 AT5G24160.3 48.499 433 218 4 92 520 1 432 8.32e-150 436
Msa1381870 AT5G24160.2 50.000 370 175 5 33 398 24 387 1.89e-127 377
Msa1381870 AT5G24155.2 68.421 57 18 0 61 117 49 105 1.61e-20 87.4
Msa1381870 AT5G24155.1 68.421 57 18 0 61 117 49 105 3.15e-20 87.0
Msa1381870 AT5G24155.3 68.421 57 18 0 61 117 49 105 3.93e-20 86.7

Find 139 sgRNAs with CRISPR-Local

Find 235 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
CATTGTCTCTTCCAACTTTA+TGG 0.060236 tig0020460:+10792 Msa1381870:three_prime_UTR
GGCAATTAGTGGGCCATATT+TGG 0.166717 tig0020460:-10581 None:intergenic
ACATCATTACTTGAAGAAAA+TGG 0.216396 tig0020460:+8649 Msa1381870:CDS
CGAATCTCGGTACTACTTAT+AGG 0.218539 tig0020460:-8992 None:intergenic
GTATATTCTAGGAGGGATTT+TGG 0.223635 tig0020460:+7001 Msa1381870:CDS
ACTTATAGGGTAAAACAAAA+TGG 0.229140 tig0020460:-8978 None:intergenic
GTCATTCCTCCTCCTGTTAA+AGG 0.240165 tig0020460:-9433 None:intergenic
TTGACCTTCCCTTCTAATTA+AGG 0.249626 tig0020460:-6794 None:intergenic
CCCTTCTAATTAAGGAAGTA+TGG 0.257746 tig0020460:-6786 None:intergenic
ATAAAAGAAGCTTGCAGTTC+TGG 0.264689 tig0020460:-9298 None:intergenic
TCCATACTTCCTTAATTAGA+AGG 0.273511 tig0020460:+6785 Msa1381870:five_prime_UTR
CCTTTCTTAGGAGATGTTAA+TGG 0.277114 tig0020460:-10546 None:intergenic
TAATATGCTGGCACACTTGC+TGG 0.295840 tig0020460:-10508 None:intergenic
ATTTGCACCATGCCTTTCTT+AGG 0.297051 tig0020460:-10558 None:intergenic
GATGCAGGCATGCTTCTATT+TGG 0.299001 tig0020460:-9355 None:intergenic
GTTTGGCTATGCACTTTATA+AGG 0.306005 tig0020460:+8386 Msa1381870:CDS
GTTAGTAGTTGGTAGGTAAA+TGG 0.306860 tig0020460:+6761 None:intergenic
AATATGCGTCATCCTTTAAC+AGG 0.308584 tig0020460:+9421 Msa1381870:CDS
GCAAAGACATCATCAGAAAA+TGG 0.314469 tig0020460:+7116 Msa1381870:CDS
TTTATTGCAGCAGTTGATAA+AGG 0.324523 tig0020460:+9316 Msa1381870:CDS
GCTCCGATCCACATTCGTTT+TGG 0.330287 tig0020460:-10199 None:intergenic
AAAACAACCATCACATACTA+TGG 0.340829 tig0020460:-8737 None:intergenic
CACTCCTTCAGCCTTGATAA+TGG 0.342933 tig0020460:-10470 None:intergenic
GTACATAATCATAAGTATAT+AGG 0.347301 tig0020460:-6863 None:intergenic
GCATGGTGCAAATCCAAATA+TGG 0.350121 tig0020460:+10568 Msa1381870:three_prime_UTR
ACTCCTTCAGCCTTGATAAT+GGG 0.353925 tig0020460:-10469 None:intergenic
TTCTTCGCAGTGGCTGTATA+TGG 0.358668 tig0020460:+10145 Msa1381870:CDS
GTGTTTGTTATGTATAGTTT+TGG 0.359194 tig0020460:+7041 Msa1381870:CDS
ATGGATTATCAGTATATTCT+AGG 0.363275 tig0020460:+6990 Msa1381870:CDS
TACATAATCATAAGTATATA+GGG 0.363334 tig0020460:-6862 None:intergenic
TTTGGAGAAAAGAAGAAAAC+AGG 0.363799 tig0020460:+7059 Msa1381870:CDS
AGTCCACCACACATCCGTTT+TGG 0.367037 tig0020460:-10602 None:intergenic
TTCTCTTGGTAATGGTGAAA+TGG 0.372756 tig0020460:+9051 Msa1381870:CDS
AAGTTTGACTCTGATGTATC+TGG 0.380737 tig0020460:+8444 Msa1381870:CDS
TATTTGAAGTTACTTGAGTT+GGG 0.387474 tig0020460:+7961 Msa1381870:CDS
ATTGTAGGTGCCGGAGTTGC+TGG 0.396463 tig0020460:+7179 Msa1381870:CDS
AACTTTATGGCATTAATAAA+CGG 0.402887 tig0020460:+10805 Msa1381870:three_prime_UTR
TTACTTGAGTTGGGTCTTGA+AGG 0.404516 tig0020460:+7970 Msa1381870:CDS
ATGATATTTCAGGGTGCATC+AGG 0.407420 tig0020460:+10436 Msa1381870:intron
CTATTTGAAGTTACTTGAGT+TGG 0.409758 tig0020460:+7960 Msa1381870:CDS
GAATCTCGGTACTACTTATA+GGG 0.411683 tig0020460:-8991 None:intergenic
TTCCAAGGGATAAGACAGTT+TGG 0.414928 tig0020460:-8421 None:intergenic
GAAAACTGTGGTTGCTCCCC+AGG 0.418914 tig0020460:+9084 Msa1381870:CDS
AATTCACCCACAATTCTATC+AGG 0.425034 tig0020460:-7922 None:intergenic
GGCTATGCACTTTATAAGGA+TGG 0.431044 tig0020460:+8390 Msa1381870:CDS
ATTGATGCTCAAAGAGTGTT+TGG 0.434501 tig0020460:+8369 Msa1381870:CDS
AAATTACCTTCTCTTGGTAA+TGG 0.436743 tig0020460:+9043 Msa1381870:CDS
TAGTACCGAGATTCGCTGTT+TGG 0.439202 tig0020460:+9000 Msa1381870:CDS
CTTAGGAGATGTTAATGGAC+AGG 0.441532 tig0020460:-10541 None:intergenic
AAATCATGGACATGTTATCT+TGG 0.449608 tig0020460:+8943 Msa1381870:CDS
GAAAACAGGTTCAAGTTCAA+TGG 0.452744 tig0020460:+7073 Msa1381870:CDS
GTTTATTAATGCCATAAAGT+TGG 0.457418 tig0020460:-10803 None:intergenic
TACCAAACTGTCTTATCCCT+TGG 0.460598 tig0020460:+8419 Msa1381870:CDS
TGTTTGGTTGATGTGCCTAC+TGG 0.462828 tig0020460:+9016 Msa1381870:CDS
ATTTGTTCACAAGAGGTTGT+TGG 0.466336 tig0020460:+7140 Msa1381870:CDS
CTTATAGGGTAAAACAAAAT+GGG 0.467121 tig0020460:-8977 None:intergenic
GCATCACCTTATCCCACCCC+CGG 0.468182 tig0020460:+9373 Msa1381870:CDS
CTTGGAGGTGTTTGCTCAGA+CGG 0.468969 tig0020460:+10067 Msa1381870:CDS
CGGCGCATTTCAATGCTAGC+TGG 0.470263 tig0020460:-10022 None:intergenic
ATTTCAATGCTAGCTGGATC+AGG 0.470527 tig0020460:-10016 None:intergenic
ATCTCCCATCAGAAGAGCCC+CGG 0.474937 tig0020460:-9392 None:intergenic
GAAACAGATATCATCATTGT+AGG 0.477088 tig0020460:+7164 Msa1381870:CDS
AGACCGGAGAGTAGAGCTAT+TGG 0.479940 tig0020460:-10091 None:intergenic
CATACAGAGAATGCGAGAAA+AGG 0.484631 tig0020460:+8491 Msa1381870:CDS
TTTGATTATTTGAGCCTTGG+AGG 0.486117 tig0020460:+10052 Msa1381870:CDS
CGAAATATAGTGTTAGTAGT+TGG 0.492396 tig0020460:+6750 None:intergenic
TATAGTACAATAAATAATAC+AGG 0.493033 tig0020460:-10667 None:intergenic
GCGTTCTCTTTGTAATCCTA+AGG 0.502353 tig0020460:+8771 Msa1381870:CDS
TCAATGGATGTGAAAAGTAA+TGG 0.505232 tig0020460:+7089 Msa1381870:CDS
GCTGCTCTTGCTTATACACT+TGG 0.506736 tig0020460:+7203 Msa1381870:CDS
TGGCCCACTAATTGCCAAAA+CGG 0.510864 tig0020460:+10588 Msa1381870:three_prime_UTR
ACTGAGCCTGATAGAATTGT+GGG 0.511948 tig0020460:+7916 Msa1381870:CDS
GCTATGCACTTTATAAGGAT+GGG 0.512908 tig0020460:+8391 Msa1381870:CDS
AATCTTCCACATGCAAATCA+TGG 0.513553 tig0020460:+8929 Msa1381870:CDS
AAATGTAGAACCAAGCTCAA+TGG 0.516083 tig0020460:-10124 None:intergenic
TCTACAATAAACACATTAGC+AGG 0.520455 tig0020460:+9965 Msa1381870:CDS
AAGAGCAGCACCAGCAACTC+CGG 0.522278 tig0020460:-7189 None:intergenic
TCTCCCATCAGAAGAGCCCC+GGG 0.523212 tig0020460:-9391 None:intergenic
GAAGAAAATGGAACTATCAA+AGG 0.527154 tig0020460:+8661 Msa1381870:CDS
GGGGTGGGATAAGGTGATGC+AGG 0.527706 tig0020460:-9370 None:intergenic
CGTCATCCTTTAACAGGAGG+AGG 0.532176 tig0020460:+9427 Msa1381870:CDS
GATATCATCATTGTAGGTGC+CGG 0.533101 tig0020460:+7170 Msa1381870:CDS
CTCCTTCAGCCTTGATAATG+GGG 0.533319 tig0020460:-10468 None:intergenic
TAAAGGATGACGCATATTGA+AGG 0.537263 tig0020460:-9416 None:intergenic
TTCCCCATTATCAAGGCTGA+AGG 0.539446 tig0020460:+10466 Msa1381870:CDS
CTTGTTTGTTGCAGGATGGA+CGG 0.540600 tig0020460:+7866 Msa1381870:intron
GAATCCGCGTCCATTGAGCT+TGG 0.541714 tig0020460:+10114 Msa1381870:CDS
AACTGAGCCTGATAGAATTG+TGG 0.542024 tig0020460:+7915 Msa1381870:CDS
CCATTAACATCTCCTAAGAA+AGG 0.544165 tig0020460:+10546 Msa1381870:exon
GTGTTTATTGTAGATGCCAC+TGG 0.545278 tig0020460:-9956 None:intergenic
AAATGGAATTTGTTCACAAG+AGG 0.548076 tig0020460:+7133 Msa1381870:CDS
TTCCTTCTCCAAAACGAATG+TGG 0.549297 tig0020460:+10191 Msa1381870:CDS
CCATACTTCCTTAATTAGAA+GGG 0.551504 tig0020460:+6786 Msa1381870:five_prime_UTR
CCTCTCACCATAGTATGTGA+TGG 0.552875 tig0020460:+8730 Msa1381870:CDS
TTGAATTATTGCAGATTGTG+TGG 0.554505 tig0020460:+8341 Msa1381870:intron
TCAAATAATCAAAACAAGCT+CGG 0.559243 tig0020460:-10042 None:intergenic
AATCATGGACATGTTATCTT+GGG 0.559662 tig0020460:+8944 Msa1381870:CDS
ACAAAGAGAACGCCTCAAGT+TGG 0.560044 tig0020460:-8761 None:intergenic
GGAGGCATTCTGTAATATGC+TGG 0.562084 tig0020460:-10520 None:intergenic
ATCAACCAAACAGCGAATCT+CGG 0.564278 tig0020460:-9005 None:intergenic
GCAGTGGCTGTATATGGTGT+TGG 0.566615 tig0020460:+10151 Msa1381870:CDS
CAATGGACGCGGATTCAGAC+CGG 0.575137 tig0020460:-10107 None:intergenic
ACTTCCTTAATTAGAAGGGA+AGG 0.578023 tig0020460:+6790 Msa1381870:five_prime_UTR
GGTTCTACATTTCTTCGCAG+TGG 0.580476 tig0020460:+10135 Msa1381870:CDS
ATTTCACCATTACCAAGAGA+AGG 0.583232 tig0020460:-9049 None:intergenic
TCTTGCTTATACACTTGGAA+AGG 0.583251 tig0020460:+7208 Msa1381870:CDS
AATCAATCCAACAAAATGAG+AGG 0.583831 tig0020460:-8894 None:intergenic
GGGTAAAACAAAATGGGTGA+AGG 0.590534 tig0020460:-8971 None:intergenic
ATCAATCCAACAAAATGAGA+GGG 0.594183 tig0020460:-8893 None:intergenic
AGAACCAAGCTCAATGGACG+CGG 0.596711 tig0020460:-10118 None:intergenic
AAAGAAGCTTGCAGTTCTGG+AGG 0.598501 tig0020460:-9295 None:intergenic
ATATAGTGTTAGTAGTTGGT+AGG 0.599630 tig0020460:+6754 None:intergenic
CGTCTGAGCAAACACCTCCA+AGG 0.602662 tig0020460:-10066 None:intergenic
ATTATCAGTATATTCTAGGA+GGG 0.608177 tig0020460:+6994 Msa1381870:CDS
GATTATCAGTATATTCTAGG+AGG 0.622192 tig0020460:+6993 Msa1381870:CDS
TGCAGTGTTAAATTAGAACA+AGG 0.622507 tig0020460:+8619 Msa1381870:intron
TGGTCAAGAATTCACAGCAA+AGG 0.624872 tig0020460:+8705 Msa1381870:CDS
TCTCCAAAACGAATGTGGAT+CGG 0.626029 tig0020460:+10196 Msa1381870:CDS
AACATCTCCTAAGAAAGGCA+TGG 0.630546 tig0020460:+10551 Msa1381870:exon
GGCAAATTATTTGAAAACTG+TGG 0.634271 tig0020460:+9072 Msa1381870:CDS
GGACCAATAGCTCTACTCTC+CGG 0.637723 tig0020460:+10088 Msa1381870:CDS
GAGAAGGAAACGGTATCAAG+AGG 0.638267 tig0020460:-10177 None:intergenic
CCATCACATACTATGGTGAG+AGG 0.648098 tig0020460:-8730 None:intergenic
GTCGTTCTACACTCTACGCA+AGG 0.648565 tig0020460:+9546 Msa1381870:CDS
AGGAGATGTTAATGGACAGG+AGG 0.652018 tig0020460:-10538 None:intergenic
ATGCGTCATCCTTTAACAGG+AGG 0.657566 tig0020460:+9424 Msa1381870:CDS
TTGCCAAAACGGATGTGTGG+TGG 0.660636 tig0020460:+10599 Msa1381870:three_prime_UTR
TCCCATCAGAAGAGCCCCGG+GGG 0.663173 tig0020460:-9389 None:intergenic
AAGGAAACGGTATCAAGAGG+CGG 0.664438 tig0020460:-10174 None:intergenic
AGTAACTTCAAATAGCCACC+AGG 0.665041 tig0020460:-7952 None:intergenic
AACAATGTCAGACAAAGCCA+CGG 0.666432 tig0020460:-9455 None:intergenic
GTAGAGTGTAGAACGACTCA+AGG 0.674131 tig0020460:-9540 None:intergenic
ACATGTCCATGATTTGCATG+TGG 0.682646 tig0020460:-8935 None:intergenic
GTGGGTGAATTGCTACAACC+TGG 0.687984 tig0020460:+7934 Msa1381870:CDS
TAATTGCCAAAACGGATGTG+TGG 0.708333 tig0020460:+10596 Msa1381870:three_prime_UTR
CTCCCATCAGAAGAGCCCCG+GGG 0.708970 tig0020460:-9390 None:intergenic
GCATCATGCAGATTACGCAG+AGG 0.710857 tig0020460:-9499 None:intergenic
GGTGAATTGCTACAACCTGG+TGG 0.730275 tig0020460:+7937 Msa1381870:CDS
AACAGGAGGAGGAATGACCG+TGG 0.739407 tig0020460:+9438 Msa1381870:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! TACATAATCATAAGTATATA+GGG - tig0020460:6865-6884 None:intergenic 15.0%
!!! AAAAAAAAAAATCTTTGAGA+TGG + tig0020460:6971-6990 Msa1381870:exon 15.0%
!! AGTTCTATAAAATTATGTAT+AGG + tig0020460:7663-7682 Msa1381870:intron 15.0%
!! TGTTATACAAAAAATTAACA+AGG - tig0020460:7819-7838 None:intergenic 15.0%
!! ATATTTAACCCTTTAATATA+TGG + tig0020460:8212-8231 Msa1381870:intron 15.0%
!! ATAATGTTCCATATATTAAA+GGG - tig0020460:8223-8242 None:intergenic 15.0%
!! ATTCAATAAAACTTAATCAT+TGG - tig0020460:8585-8604 None:intergenic 15.0%
!!! TAAGTTTTTTCATTCTATTT+TGG - tig0020460:9847-9866 None:intergenic 15.0%
!! AAATAGAATGAAAAAACTTA+AGG + tig0020460:9847-9866 Msa1381870:intron 15.0%
!! AATAGAATGAAAAAACTTAA+GGG + tig0020460:9848-9867 Msa1381870:intron 15.0%
!! TAAACATATATTTGTTTGTT+TGG + tig0020460:10266-10285 Msa1381870:intron 15.0%
!! TATAGTACAATAAATAATAC+AGG - tig0020460:10670-10689 None:intergenic 15.0%
!! GTACATAATCATAAGTATAT+AGG - tig0020460:6866-6885 None:intergenic 20.0%
!!! TCTTTCTTTACTTTTTATAG+CGG - tig0020460:6898-6917 None:intergenic 20.0%
!! GCATAAACTCAAAAAATAAA+AGG - tig0020460:7249-7268 None:intergenic 20.0%
!! TTAAATTGATCATCTAAACA+AGG - tig0020460:7403-7422 None:intergenic 20.0%
!! AAGCAAAACAATGATTAAAT+TGG - tig0020460:8098-8117 None:intergenic 20.0%
!! CATAATGTTCCATATATTAA+AGG - tig0020460:8224-8243 None:intergenic 20.0%
!! TTGAAGTATATATGTTTCTT+AGG + tig0020460:8250-8269 Msa1381870:intron 20.0%
!! CAAATACAATTTACATACTT+TGG - tig0020460:8528-8547 None:intergenic 20.0%
!!! ATTCTCAATTTTTTTACCTT+AGG - tig0020460:8790-8809 None:intergenic 20.0%
!! AATATATGTTTAAGCACATA+GGG - tig0020460:10258-10277 None:intergenic 20.0%
!! AAATATATGTTTAAGCACAT+AGG - tig0020460:10259-10278 None:intergenic 20.0%
!!! TATTTTTCCATGATATTTCA+GGG + tig0020460:10427-10446 Msa1381870:intron 20.0%
!! AACTTTATGGCATTAATAAA+CGG + tig0020460:10805-10824 Msa1381870:three_prime_UTR 20.0%
!! ATGGATTATCAGTATATTCT+AGG + tig0020460:6990-7009 Msa1381870:CDS 25.0%
!! ATTATCAGTATATTCTAGGA+GGG + tig0020460:6994-7013 Msa1381870:CDS 25.0%
!!! GTGTTTGTTATGTATAGTTT+TGG + tig0020460:7041-7060 Msa1381870:CDS 25.0%
! TATGCATTTCATCAATATGA+TGG + tig0020460:7264-7283 Msa1381870:intron 25.0%
! ATATGTTCCAATGAAAAGAT+TGG + tig0020460:7348-7367 Msa1381870:intron 25.0%
! GTTGTTAAGACTAATATCTT+AGG + tig0020460:7377-7396 Msa1381870:intron 25.0%
!!! CATATCTTGTTTTTATGTCT+TGG + tig0020460:7753-7772 Msa1381870:intron 25.0%
!! TATTTGAAGTTACTTGAGTT+GGG + tig0020460:7961-7980 Msa1381870:CDS 25.0%
! TTAAATTGGACAATTTATGC+AGG - tig0020460:8084-8103 None:intergenic 25.0%
! TTTAATAGAGACTAAATGCA+GGG + tig0020460:8116-8135 Msa1381870:intron 25.0%
!!! AATTTTCAAGTTTAATCCTG+CGG - tig0020460:8065-8084 None:intergenic 25.0%
!!! TGAAAATTCGTGAGTTTTAT+AGG + tig0020460:8181-8200 Msa1381870:intron 25.0%
! ACATCATTACTTGAAGAAAA+TGG + tig0020460:8649-8668 Msa1381870:CDS 25.0%
! TAGATCTAATTTATTTGTGC+AGG + tig0020460:8862-8881 Msa1381870:intron 25.0%
!!! TCATTTTGTTGGATTGATTT+TGG + tig0020460:8898-8917 Msa1381870:CDS 25.0%
! CTTATAGGGTAAAACAAAAT+GGG - tig0020460:8980-8999 None:intergenic 25.0%
! ACTTATAGGGTAAAACAAAA+TGG - tig0020460:8981-9000 None:intergenic 25.0%
!! AGGTAGAATGTTCATTATTT+TGG - tig0020460:9112-9131 None:intergenic 25.0%
! ATATTGCTTCTACTAATTGT+GGG + tig0020460:9255-9274 Msa1381870:intron 25.0%
! ATGCAATGACACTAATATAA+TGG + tig0020460:9631-9650 Msa1381870:intron 25.0%
! ACTCAAGTATAAAACAGTTA+GGG + tig0020460:9658-9677 Msa1381870:intron 25.0%
!! TTCTATGTGATATCATGTTT+TGG + tig0020460:9725-9744 Msa1381870:intron 25.0%
! TCAAATAATCAAAACAAGCT+CGG - tig0020460:10045-10064 None:intergenic 25.0%
!! GTATTTTTCCATGATATTTC+AGG + tig0020460:10426-10445 Msa1381870:intron 25.0%
!! GAATTTTGCACAAAAGAAAT+TGG + tig0020460:10714-10733 Msa1381870:three_prime_UTR 25.0%
! GTTTATTAATGCCATAAAGT+TGG - tig0020460:10806-10825 None:intergenic 25.0%
TCCATACTTCCTTAATTAGA+AGG + tig0020460:6785-6804 Msa1381870:five_prime_UTR 30.0%
CCATACTTCCTTAATTAGAA+GGG + tig0020460:6786-6805 Msa1381870:five_prime_UTR 30.0%
GATTATCAGTATATTCTAGG+AGG + tig0020460:6993-7012 Msa1381870:CDS 30.0%
TTTGGAGAAAAGAAGAAAAC+AGG + tig0020460:7059-7078 Msa1381870:CDS 30.0%
TCAATGGATGTGAAAAGTAA+TGG + tig0020460:7089-7108 Msa1381870:CDS 30.0%
! AAATGGAATTTGTTCACAAG+AGG + tig0020460:7133-7152 Msa1381870:CDS 30.0%
GAAACAGATATCATCATTGT+AGG + tig0020460:7164-7183 Msa1381870:CDS 30.0%
ATGAATGTGATAGAGAAACA+AGG + tig0020460:7618-7637 Msa1381870:intron 30.0%
TGAATGTGATAGAGAAACAA+GGG + tig0020460:7619-7638 Msa1381870:intron 30.0%
! TGCAAGAAAATATGTTTTCG+AGG + tig0020460:7791-7810 Msa1381870:intron 30.0%
CATATGATTTGAGAATGACT+TGG + tig0020460:7837-7856 Msa1381870:intron 30.0%
! CTATTTGAAGTTACTTGAGT+TGG + tig0020460:7960-7979 Msa1381870:CDS 30.0%
CTTTAATAGAGACTAAATGC+AGG + tig0020460:8115-8134 Msa1381870:intron 30.0%
GGGATTACAATGACTAAAAT+TGG + tig0020460:8136-8155 Msa1381870:intron 30.0%
TTGAATTATTGCAGATTGTG+TGG + tig0020460:8341-8360 Msa1381870:intron 30.0%
!! AAACTTAATCATTGGTAGTG+TGG - tig0020460:8577-8596 None:intergenic 30.0%
TGCAGTGTTAAATTAGAACA+AGG + tig0020460:8619-8638 Msa1381870:intron 30.0%
GAAGAAAATGGAACTATCAA+AGG + tig0020460:8661-8680 Msa1381870:CDS 30.0%
GTGAACTACAAAAATAAGAG+TGG + tig0020460:8685-8704 Msa1381870:CDS 30.0%
AAAACAACCATCACATACTA+TGG - tig0020460:8740-8759 None:intergenic 30.0%
ATCAATCCAACAAAATGAGA+GGG - tig0020460:8896-8915 None:intergenic 30.0%
AATCAATCCAACAAAATGAG+AGG - tig0020460:8897-8916 None:intergenic 30.0%
AAATCATGGACATGTTATCT+TGG + tig0020460:8943-8962 Msa1381870:CDS 30.0%
AATCATGGACATGTTATCTT+GGG + tig0020460:8944-8963 Msa1381870:CDS 30.0%
! TACCAAGAGAAGGTAATTTT+TGG - tig0020460:9042-9061 None:intergenic 30.0%
AAATTACCTTCTCTTGGTAA+TGG + tig0020460:9043-9062 Msa1381870:CDS 30.0%
GGCAAATTATTTGAAAACTG+TGG + tig0020460:9072-9091 Msa1381870:CDS 30.0%
!!! TGTTCATTATTTTGGTACCT+GGG - tig0020460:9104-9123 None:intergenic 30.0%
!!! ATGTTCATTATTTTGGTACC+TGG - tig0020460:9105-9124 None:intergenic 30.0%
CATATTGCTTCTACTAATTG+TGG + tig0020460:9254-9273 Msa1381870:intron 30.0%
ATTGTGGGAATTATATGTTC+AGG + tig0020460:9270-9289 Msa1381870:intron 30.0%
!! TTTATTGCAGCAGTTGATAA+AGG + tig0020460:9316-9335 Msa1381870:CDS 30.0%
GACTCAAGTATAAAACAGTT+AGG + tig0020460:9657-9676 Msa1381870:intron 30.0%
ATCACATAGAAAACATTTGC+CGG - tig0020460:9716-9735 None:intergenic 30.0%
!! TATGTGATATCATGTTTTGG+TGG + tig0020460:9728-9747 Msa1381870:intron 30.0%
AAAAACTTAAGGGACTAAAG+TGG + tig0020460:9858-9877 Msa1381870:intron 30.0%
TCTACAATAAACACATTAGC+AGG + tig0020460:9965-9984 Msa1381870:CDS 30.0%
!!! TGTTTTGATTATTTGAGCCT+TGG + tig0020460:10049-10068 Msa1381870:CDS 30.0%
! TATCATTTTCCCCATTATCA+AGG + tig0020460:10459-10478 Msa1381870:CDS 30.0%
CCCTTCTAATTAAGGAAGTA+TGG - tig0020460:6789-6808 None:intergenic 35.0%
ACTTCCTTAATTAGAAGGGA+AGG + tig0020460:6790-6809 Msa1381870:five_prime_UTR 35.0%
TTGACCTTCCCTTCTAATTA+AGG - tig0020460:6797-6816 None:intergenic 35.0%
!! GTATATTCTAGGAGGGATTT+TGG + tig0020460:7001-7020 Msa1381870:CDS 35.0%
!!! AGGGATTTTGGCTTTTAGTT+TGG + tig0020460:7013-7032 Msa1381870:CDS 35.0%
! GAAAACAGGTTCAAGTTCAA+TGG + tig0020460:7073-7092 Msa1381870:CDS 35.0%
GCAAAGACATCATCAGAAAA+TGG + tig0020460:7116-7135 Msa1381870:CDS 35.0%
ATTTGTTCACAAGAGGTTGT+TGG + tig0020460:7140-7159 Msa1381870:CDS 35.0%
TCTTGCTTATACACTTGGAA+AGG + tig0020460:7208-7227 Msa1381870:CDS 35.0%
! CATGACACCAATCTTTTCAT+TGG - tig0020460:7358-7377 None:intergenic 35.0%
!! GCTGTTTTCATAAGCTATCT+TGG + tig0020460:7475-7494 Msa1381870:intron 35.0%
AATTCACCCACAATTCTATC+AGG - tig0020460:7925-7944 None:intergenic 35.0%
TAAAATTGGACAATTTCCGC+AGG + tig0020460:8150-8169 Msa1381870:intron 35.0%
TTCTGCTGCTCAAATTCATA+TGG + tig0020460:8299-8318 Msa1381870:intron 35.0%
!! ATTGATGCTCAAAGAGTGTT+TGG + tig0020460:8369-8388 Msa1381870:CDS 35.0%
GTTTGGCTATGCACTTTATA+AGG + tig0020460:8386-8405 Msa1381870:CDS 35.0%
GCTATGCACTTTATAAGGAT+GGG + tig0020460:8391-8410 Msa1381870:CDS 35.0%
! TCAGAGTCAAACTTTTCCAA+GGG - tig0020460:8438-8457 None:intergenic 35.0%
! ATCAGAGTCAAACTTTTCCA+AGG - tig0020460:8439-8458 None:intergenic 35.0%
AAGTTTGACTCTGATGTATC+TGG + tig0020460:8444-8463 Msa1381870:CDS 35.0%
! TCTGGAAGAAGTTTTCACAA+TGG + tig0020460:8462-8481 Msa1381870:CDS 35.0%
AACACTGCATTAATGCAAGA+AGG - tig0020460:8608-8627 None:intergenic 35.0%
!!! ATGGTTGTTTTTCCAACTTG+AGG + tig0020460:8749-8768 Msa1381870:CDS 35.0%
!! GATTTGTAGTGTTGCTTAAC+AGG + tig0020460:8839-8858 Msa1381870:intron 35.0%
AATCTTCCACATGCAAATCA+TGG + tig0020460:8929-8948 Msa1381870:CDS 35.0%
GAATCTCGGTACTACTTATA+GGG - tig0020460:8994-9013 None:intergenic 35.0%
ATTTCACCATTACCAAGAGA+AGG - tig0020460:9052-9071 None:intergenic 35.0%
!! TTCTCTTGGTAATGGTGAAA+TGG + tig0020460:9051-9070 Msa1381870:CDS 35.0%
!!! GTTCATTATTTTGGTACCTG+GGG - tig0020460:9103-9122 None:intergenic 35.0%
TACTAGTATCTAGCATGAGT+AGG - tig0020460:9132-9151 None:intergenic 35.0%
ATAAAAGAAGCTTGCAGTTC+TGG - tig0020460:9301-9320 None:intergenic 35.0%
TAAAGGATGACGCATATTGA+AGG - tig0020460:9419-9438 None:intergenic 35.0%
AATATGCGTCATCCTTTAAC+AGG + tig0020460:9421-9440 Msa1381870:CDS 35.0%
!! TGTCTGACATTGTTTTGCTA+AGG + tig0020460:9464-9483 Msa1381870:CDS 35.0%
TCACATAGAAAACATTTGCC+GGG - tig0020460:9715-9734 None:intergenic 35.0%
TTTCCTTCTTCTAACTGATC+CGG - tig0020460:9761-9780 None:intergenic 35.0%
TTTGATTATTTGAGCCTTGG+AGG + tig0020460:10052-10071 Msa1381870:CDS 35.0%
AAATGTAGAACCAAGCTCAA+TGG - tig0020460:10127-10146 None:intergenic 35.0%
!!! ATTCGTTTTGGAGAAGGAAA+CGG - tig0020460:10190-10209 None:intergenic 35.0%
CCTTTCTTAGGAGATGTTAA+TGG - tig0020460:10549-10568 None:intergenic 35.0%
CCATTAACATCTCCTAAGAA+AGG + tig0020460:10546-10565 Msa1381870:exon 35.0%
CATTGTCTCTTCCAACTTTA+TGG + tig0020460:10792-10811 Msa1381870:three_prime_UTR 35.0%
GATATCATCATTGTAGGTGC+CGG + tig0020460:7170-7189 Msa1381870:CDS 40.0%
AACTGAGCCTGATAGAATTG+TGG + tig0020460:7915-7934 Msa1381870:CDS 40.0%
ACTGAGCCTGATAGAATTGT+GGG + tig0020460:7916-7935 Msa1381870:CDS 40.0%
AGTAACTTCAAATAGCCACC+AGG - tig0020460:7955-7974 None:intergenic 40.0%
!! TTACTTGAGTTGGGTCTTGA+AGG + tig0020460:7970-7989 Msa1381870:CDS 40.0%
TGAATTTGAGCAGCAGAATC+AGG - tig0020460:8297-8316 None:intergenic 40.0%
GGCTATGCACTTTATAAGGA+TGG + tig0020460:8390-8409 Msa1381870:CDS 40.0%
TACCAAACTGTCTTATCCCT+TGG + tig0020460:8419-8438 Msa1381870:CDS 40.0%
TTCCAAGGGATAAGACAGTT+TGG - tig0020460:8424-8443 None:intergenic 40.0%
CATACAGAGAATGCGAGAAA+AGG + tig0020460:8491-8510 Msa1381870:CDS 40.0%
TGGTCAAGAATTCACAGCAA+AGG + tig0020460:8705-8724 Msa1381870:CDS 40.0%
GCGTTCTCTTTGTAATCCTA+AGG + tig0020460:8771-8790 Msa1381870:CDS 40.0%
! GAAGTTCCCTCTCATTTTGT+TGG + tig0020460:8887-8906 Msa1381870:CDS 40.0%
! ACATGTCCATGATTTGCATG+TGG - tig0020460:8938-8957 None:intergenic 40.0%
GGGTAAAACAAAATGGGTGA+AGG - tig0020460:8974-8993 None:intergenic 40.0%
CGAATCTCGGTACTACTTAT+AGG - tig0020460:8995-9014 None:intergenic 40.0%
ATCAACCAAACAGCGAATCT+CGG - tig0020460:9008-9027 None:intergenic 40.0%
!!! GAAGGTAATTTTTGGCCAGT+AGG - tig0020460:9034-9053 None:intergenic 40.0%
GGCCAAAAATTACCTTCTCT+TGG + tig0020460:9037-9056 Msa1381870:CDS 40.0%
AACAATGTCAGACAAAGCCA+CGG - tig0020460:9458-9477 None:intergenic 40.0%
!!! ATGTTTTGGTGGTTAGATGC+CGG + tig0020460:9739-9758 Msa1381870:intron 40.0%
TTGATTCTATTTGCAGCCAG+TGG + tig0020460:9940-9959 Msa1381870:intron 40.0%
GTGTTTATTGTAGATGCCAC+TGG - tig0020460:9959-9978 None:intergenic 40.0%
ATTTCAATGCTAGCTGGATC+AGG - tig0020460:10019-10038 None:intergenic 40.0%
TTCCTTCTCCAAAACGAATG+TGG + tig0020460:10191-10210 Msa1381870:CDS 40.0%
!!! ATCCACATTCGTTTTGGAGA+AGG - tig0020460:10196-10215 None:intergenic 40.0%
TCTCCAAAACGAATGTGGAT+CGG + tig0020460:10196-10215 Msa1381870:CDS 40.0%
!! TCGAGTAAGTGCTGATGTAT+AGG + tig0020460:10317-10336 Msa1381870:intron 40.0%
TGATGCACCCTGAAATATCA+TGG - tig0020460:10437-10456 None:intergenic 40.0%
ATGATATTTCAGGGTGCATC+AGG + tig0020460:10436-10455 Msa1381870:intron 40.0%
! ACTCCTTCAGCCTTGATAAT+GGG - tig0020460:10472-10491 None:intergenic 40.0%
! CTTAGGAGATGTTAATGGAC+AGG - tig0020460:10544-10563 None:intergenic 40.0%
AACATCTCCTAAGAAAGGCA+TGG + tig0020460:10551-10570 Msa1381870:exon 40.0%
ATTTGCACCATGCCTTTCTT+AGG - tig0020460:10561-10580 None:intergenic 40.0%
GCATGGTGCAAATCCAAATA+TGG + tig0020460:10568-10587 Msa1381870:three_prime_UTR 40.0%
!! CATCCGTTTTGGCAATTAGT+GGG - tig0020460:10594-10613 None:intergenic 40.0%
!! ACATCCGTTTTGGCAATTAG+TGG - tig0020460:10595-10614 None:intergenic 40.0%
TAATTGCCAAAACGGATGTG+TGG + tig0020460:10596-10615 Msa1381870:three_prime_UTR 40.0%
GCTGCTCTTGCTTATACACT+TGG + tig0020460:7203-7222 Msa1381870:CDS 45.0%
! GGATTGTGCTTGTTTGTTGC+AGG + tig0020460:7858-7877 Msa1381870:intron 45.0%
! TGTGCTTGTTTGTTGCAGGA+TGG + tig0020460:7862-7881 Msa1381870:intron 45.0%
! CTTGTTTGTTGCAGGATGGA+CGG + tig0020460:7866-7885 Msa1381870:intron 45.0%
CCATCACATACTATGGTGAG+AGG - tig0020460:8733-8752 None:intergenic 45.0%
CCTCTCACCATAGTATGTGA+TGG + tig0020460:8730-8749 Msa1381870:CDS 45.0%
ACAAAGAGAACGCCTCAAGT+TGG - tig0020460:8764-8783 None:intergenic 45.0%
! TAGTACCGAGATTCGCTGTT+TGG + tig0020460:9000-9019 Msa1381870:CDS 45.0%
! TGTTTGGTTGATGTGCCTAC+TGG + tig0020460:9016-9035 Msa1381870:CDS 45.0%
! AAAGAAGCTTGCAGTTCTGG+AGG - tig0020460:9298-9317 None:intergenic 45.0%
GATGCAGGCATGCTTCTATT+TGG - tig0020460:9358-9377 None:intergenic 45.0%
ATGCGTCATCCTTTAACAGG+AGG + tig0020460:9424-9443 Msa1381870:CDS 45.0%
GTCATTCCTCCTCCTGTTAA+AGG - tig0020460:9436-9455 None:intergenic 45.0%
GTAGAGTGTAGAACGACTCA+AGG - tig0020460:9543-9562 None:intergenic 45.0%
! CATTGTTTTCCGTATGAGCC+CGG + tig0020460:9694-9713 Msa1381870:intron 45.0%
AAACATTTGCCGGGCTCATA+CGG - tig0020460:9706-9725 None:intergenic 45.0%
ATGCCGGATCAGTTAGAAGA+AGG + tig0020460:9755-9774 Msa1381870:intron 45.0%
GGTTCTACATTTCTTCGCAG+TGG + tig0020460:10135-10154 Msa1381870:CDS 45.0%
TTCTTCGCAGTGGCTGTATA+TGG + tig0020460:10145-10164 Msa1381870:CDS 45.0%
AAGGAAACGGTATCAAGAGG+CGG - tig0020460:10177-10196 None:intergenic 45.0%
GAGAAGGAAACGGTATCAAG+AGG - tig0020460:10180-10199 None:intergenic 45.0%
TTCCCCATTATCAAGGCTGA+AGG + tig0020460:10466-10485 Msa1381870:CDS 45.0%
!! CTCCTTCAGCCTTGATAATG+GGG - tig0020460:10471-10490 None:intergenic 45.0%
CACTCCTTCAGCCTTGATAA+TGG - tig0020460:10473-10492 None:intergenic 45.0%
TAATATGCTGGCACACTTGC+TGG - tig0020460:10511-10530 None:intergenic 45.0%
!! GGAGGCATTCTGTAATATGC+TGG - tig0020460:10523-10542 None:intergenic 45.0%
! AGGAGATGTTAATGGACAGG+AGG - tig0020460:10541-10560 None:intergenic 45.0%
! GGCAATTAGTGGGCCATATT+TGG - tig0020460:10584-10603 None:intergenic 45.0%
TGGCCCACTAATTGCCAAAA+CGG + tig0020460:10588-10607 Msa1381870:three_prime_UTR 45.0%
!! GATGAGCACTTGTTGTGCGA+CGG - tig0020460:7535-7554 None:intergenic 50.0%
GTGGGTGAATTGCTACAACC+TGG + tig0020460:7934-7953 Msa1381870:CDS 50.0%
GGTGAATTGCTACAACCTGG+TGG + tig0020460:7937-7956 Msa1381870:CDS 50.0%
CGTCATCCTTTAACAGGAGG+AGG + tig0020460:9427-9446 Msa1381870:CDS 50.0%
GCATCATGCAGATTACGCAG+AGG - tig0020460:9502-9521 None:intergenic 50.0%
GTCGTTCTACACTCTACGCA+AGG + tig0020460:9546-9565 Msa1381870:CDS 50.0%
CGGGCTCATACGGAAAACAA+TGG - tig0020460:9696-9715 None:intergenic 50.0%
!! CTTGGAGGTGTTTGCTCAGA+CGG + tig0020460:10067-10086 Msa1381870:CDS 50.0%
! GGACCAATAGCTCTACTCTC+CGG + tig0020460:10088-10107 Msa1381870:CDS 50.0%
AGACCGGAGAGTAGAGCTAT+TGG - tig0020460:10094-10113 None:intergenic 50.0%
AGAACCAAGCTCAATGGACG+CGG - tig0020460:10121-10140 None:intergenic 50.0%
GCAGTGGCTGTATATGGTGT+TGG + tig0020460:10151-10170 Msa1381870:CDS 50.0%
! GCTCCGATCCACATTCGTTT+TGG - tig0020460:10202-10221 None:intergenic 50.0%
TTGCCAAAACGGATGTGTGG+TGG + tig0020460:10599-10618 Msa1381870:three_prime_UTR 50.0%
! AGTCCACCACACATCCGTTT+TGG - tig0020460:10605-10624 None:intergenic 50.0%
!! ATTGTAGGTGCCGGAGTTGC+TGG + tig0020460:7179-7198 Msa1381870:CDS 55.0%
AAGAGCAGCACCAGCAACTC+CGG - tig0020460:7192-7211 None:intergenic 55.0%
GAAAACTGTGGTTGCTCCCC+AGG + tig0020460:9084-9103 Msa1381870:CDS 55.0%
ATCTCCCATCAGAAGAGCCC+CGG - tig0020460:9395-9414 None:intergenic 55.0%
AACAGGAGGAGGAATGACCG+TGG + tig0020460:9438-9457 Msa1381870:CDS 55.0%
CGGCGCATTTCAATGCTAGC+TGG - tig0020460:10025-10044 None:intergenic 55.0%
CGTCTGAGCAAACACCTCCA+AGG - tig0020460:10069-10088 None:intergenic 55.0%
CAATGGACGCGGATTCAGAC+CGG - tig0020460:10110-10129 None:intergenic 55.0%
GAATCCGCGTCCATTGAGCT+TGG + tig0020460:10114-10133 Msa1381870:CDS 55.0%
GGGGTGGGATAAGGTGATGC+AGG - tig0020460:9373-9392 None:intergenic 60.0%
GCATCACCTTATCCCACCCC+CGG + tig0020460:9373-9392 Msa1381870:CDS 60.0%
CATCACCTTATCCCACCCCC+GGG + tig0020460:9374-9393 Msa1381870:CDS 60.0%
ATCACCTTATCCCACCCCCG+GGG + tig0020460:9375-9394 Msa1381870:CDS 60.0%
TCTCCCATCAGAAGAGCCCC+GGG - tig0020460:9394-9413 None:intergenic 60.0%
ATCAGAAGAGCCCCGGGGGT+GGG - tig0020460:9388-9407 None:intergenic 65.0%
ACCCCCGGGGCTCTTCTGAT+GGG + tig0020460:9388-9407 Msa1381870:CDS 65.0%
TCCCATCAGAAGAGCCCCGG+GGG - tig0020460:9392-9411 None:intergenic 65.0%
CTCCCATCAGAAGAGCCCCG+GGG - tig0020460:9393-9412 None:intergenic 65.0%
AGAGCCCCGGGGGTGGGATA+AGG - tig0020460:9382-9401 None:intergenic 70.0%
CATCAGAAGAGCCCCGGGGG+TGG - tig0020460:9389-9408 None:intergenic 70.0%
CACCCCCGGGGCTCTTCTGA+TGG + tig0020460:9387-9406 Msa1381870:CDS 70.0%
Chromosome Type Strat End Strand Name
tig0020460 gene 6762 10830 6762 ID=Msa1381870;Name=Msa1381870
tig0020460 mRNA 6762 10830 6762 ID=Msa1381870-mRNA-1;Parent=Msa1381870;Name=Msa1381870-mRNA-1;_AED=0.09;_eAED=0.09;_QI=228|1|1|1|1|1|8|278|525
tig0020460 exon 6762 7229 6762 ID=Msa1381870-mRNA-1:exon:7812;Parent=Msa1381870-mRNA-1
tig0020460 exon 7880 7991 7880 ID=Msa1381870-mRNA-1:exon:7813;Parent=Msa1381870-mRNA-1
tig0020460 exon 8355 8529 8355 ID=Msa1381870-mRNA-1:exon:7814;Parent=Msa1381870-mRNA-1
tig0020460 exon 8624 8792 8624 ID=Msa1381870-mRNA-1:exon:7815;Parent=Msa1381870-mRNA-1
tig0020460 exon 8884 9105 8884 ID=Msa1381870-mRNA-1:exon:7816;Parent=Msa1381870-mRNA-1
tig0020460 exon 9292 9567 9292 ID=Msa1381870-mRNA-1:exon:7817;Parent=Msa1381870-mRNA-1
tig0020460 exon 9956 10234 9956 ID=Msa1381870-mRNA-1:exon:7818;Parent=Msa1381870-mRNA-1
tig0020460 exon 10448 10830 10448 ID=Msa1381870-mRNA-1:exon:7819;Parent=Msa1381870-mRNA-1
tig0020460 five_prime_UTR 6762 6989 6762 ID=Msa1381870-mRNA-1:five_prime_utr;Parent=Msa1381870-mRNA-1
tig0020460 CDS 6990 7229 6990 ID=Msa1381870-mRNA-1:cds;Parent=Msa1381870-mRNA-1
tig0020460 CDS 7880 7991 7880 ID=Msa1381870-mRNA-1:cds;Parent=Msa1381870-mRNA-1
tig0020460 CDS 8355 8529 8355 ID=Msa1381870-mRNA-1:cds;Parent=Msa1381870-mRNA-1
tig0020460 CDS 8624 8792 8624 ID=Msa1381870-mRNA-1:cds;Parent=Msa1381870-mRNA-1
tig0020460 CDS 8884 9105 8884 ID=Msa1381870-mRNA-1:cds;Parent=Msa1381870-mRNA-1
tig0020460 CDS 9292 9567 9292 ID=Msa1381870-mRNA-1:cds;Parent=Msa1381870-mRNA-1
tig0020460 CDS 9956 10234 9956 ID=Msa1381870-mRNA-1:cds;Parent=Msa1381870-mRNA-1
tig0020460 CDS 10448 10552 10448 ID=Msa1381870-mRNA-1:cds;Parent=Msa1381870-mRNA-1
tig0020460 three_prime_UTR 10553 10830 10553 ID=Msa1381870-mRNA-1:three_prime_utr;Parent=Msa1381870-mRNA-1
Gene Sequence

>Msa1381870

ATGGATTATCAGTATATTCTAGGAGGGATTTTGGCTTTTAGTTTGGCGTTTGTGTTTGTTATGTATAGTTTTGGAGAAAAGAAGAAAACAGGTTCAAGTTCAATGGATGTGAAAAGTAATGGATATGCAAAGACATCATCAGAAAATGGAATTTGTTCACAAGAGGTTGTTGGAGAAACAGATATCATCATTGTAGGTGCCGGAGTTGCTGGTGCTGCTCTTGCTTATACACTTGGAAAGGATGGACGGCGAGTACATGTGATAGAAAGAGACTTAACTGAGCCTGATAGAATTGTGGGTGAATTGCTACAACCTGGTGGCTATTTGAAGTTACTTGAGTTGGGTCTTGAAGATTGTGTGGATGAAATTGATGCTCAAAGAGTGTTTGGCTATGCACTTTATAAGGATGGGAGAAATACCAAACTGTCTTATCCCTTGGAAAAGTTTGACTCTGATGTATCTGGAAGAAGTTTTCACAATGGTCGTTTCATACAGAGAATGCGAGAAAAGGCTTCAACTATTCCAAATGTTAAATTAGAACAAGGAACTGTTACATCATTACTTGAAGAAAATGGAACTATCAAAGGTGTGAACTACAAAAATAAGAGTGGTCAAGAATTCACAGCAAAGGCTCCTCTCACCATAGTATGTGATGGTTGTTTTTCCAACTTGAGGCGTTCTCTTTGTAATCCTAAGGTTGAAGTTCCCTCTCATTTTGTTGGATTGATTTTGGAGAATTGTAATCTTCCACATGCAAATCATGGACATGTTATCTTGGGTGATCCTTCACCCATTTTGTTTTACCCTATAAGTAGTACCGAGATTCGCTGTTTGGTTGATGTGCCTACTGGCCAAAAATTACCTTCTCTTGGTAATGGTGAAATGGCAAATTATTTGAAAACTGTGGTTGCTCCCCAGGTTCCTCCAGAACTGCAAGCTTCTTTTATTGCAGCAGTTGATAAAGGAAACATAAGAAGCATGCCAAATAGAAGCATGCCTGCATCACCTTATCCCACCCCCGGGGCTCTTCTGATGGGAGATGCCTTCAATATGCGTCATCCTTTAACAGGAGGAGGAATGACCGTGGCTTTGTCTGACATTGTTTTGCTAAGGAATCTACTTAAACCTCTGCGTAATCTGCATGATGCTTCTGCTCTTTGCAATTACCTTGAGTCGTTCTACACTCTACGCAAGCCAGTGGCATCTACAATAAACACATTAGCAGGTGCATTGTACAAAGTATTTTGTGCATCTCCTGATCCAGCTAGCATTGAAATGCGCCGAGCTTGTTTTGATTATTTGAGCCTTGGAGGTGTTTGCTCAGACGGACCAATAGCTCTACTCTCCGGTCTGAATCCGCGTCCATTGAGCTTGGTTCTACATTTCTTCGCAGTGGCTGTATATGGTGTTGGCCGCCTCTTGATACCGTTTCCTTCTCCAAAACGAATGTGGATCGGAGCTAGATTGATTTCTGGTGCATCAGGTATCATTTTCCCCATTATCAAGGCTGAAGGAGTGAGACAAATGTTTTTTCCAGCAAGTGTGCCAGCATATTACAGAATGCCTCCTGTCCATTAA

Protein sequence

>Msa1381870

MDYQYILGGILAFSLAFVFVMYSFGEKKKTGSSSMDVKSNGYAKTSSENGICSQEVVGETDIIIVGAGVAGAALAYTLGKDGRRVHVIERDLTEPDRIVGELLQPGGYLKLLELGLEDCVDEIDAQRVFGYALYKDGRNTKLSYPLEKFDSDVSGRSFHNGRFIQRMREKASTIPNVKLEQGTVTSLLEENGTIKGVNYKNKSGQEFTAKAPLTIVCDGCFSNLRRSLCNPKVEVPSHFVGLILENCNLPHANHGHVILGDPSPILFYPISSTEIRCLVDVPTGQKLPSLGNGEMANYLKTVVAPQVPPELQASFIAAVDKGNIRSMPNRSMPASPYPTPGALLMGDAFNMRHPLTGGGMTVALSDIVLLRNLLKPLRNLHDASALCNYLESFYTLRKPVASTINTLAGALYKVFCASPDPASIEMRRACFDYLSLGGVCSDGPIALLSGLNPRPLSLVLHFFAVAVYGVGRLLIPFPSPKRMWIGARLISGASGIIFPIIKAEGVRQMFFPASVPAYYRMPPVH*