AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa1421970

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa1421970 MtrunA17_Chr1g0174271 73.303 442 47 8 2 435 4 382 0.0 600
Msa1421970 MtrunA17_Chr7g0258181 54.348 230 76 3 197 423 112 315 1.85e-70 225
Msa1421970 MtrunA17_Chr4g0032951 49.793 241 100 8 200 428 201 432 7.53e-65 214
Msa1421970 MtrunA17_Chr2g0329041 50.213 235 101 6 201 428 183 408 9.03e-64 211
Msa1421970 MtrunA17_Chr3g0087771 44.878 205 100 4 229 428 203 399 7.36e-44 158
Msa1421970 MtrunA17_Chr8g0351881 41.841 239 120 5 193 423 161 388 5.34e-39 144
Msa1421970 MtrunA17_Chr4g0014771 69.663 89 25 1 335 423 104 190 3.47e-37 134
Msa1421970 MtrunA17_Chr1g0213791 62.617 107 37 2 318 423 233 337 4.62e-36 135
Msa1421970 MtrunA17_Chr4g0074161 59.420 69 27 1 350 418 205 272 1.51e-17 84.3
Msa1421970 MtrunA17_Chr1g0190731 53.333 75 34 1 344 418 186 259 1.93e-16 80.5
Msa1421970 MtrunA17_Chr1g0152131 53.425 73 34 0 349 421 258 330 2.58e-16 80.5
Msa1421970 MtrunA17_Chr3g0131771 56.716 67 29 0 351 417 147 213 1.58e-15 77.4
Msa1421970 MtrunA17_Chr5g0421111 53.521 71 33 0 351 421 365 435 3.97e-15 77.4
Msa1421970 MtrunA17_Chr3g0144641 55.072 69 31 0 351 419 191 259 5.15e-15 76.6
Msa1421970 MtrunA17_Chr7g0234761 53.623 69 32 0 351 419 317 385 9.46e-15 76.3
Msa1421970 MtrunA17_Chr8g0365941 53.623 69 32 0 351 419 305 373 1.18e-14 75.9
Msa1421970 MtrunA17_Chr8g0339091 53.731 67 31 0 351 417 291 357 2.10e-14 75.1
Msa1421970 MtrunA17_Chr4g0035101 50.000 76 36 1 344 419 138 211 2.66e-14 73.9
Msa1421970 MtrunA17_Chr8g0385911 52.174 69 33 0 351 419 145 213 3.87e-14 73.2
Msa1421970 MtrunA17_Chr8g0363921 50.746 67 33 0 351 417 151 217 1.91e-13 70.5
Msa1421970 MtrunA17_Chr5g0415291 49.254 67 34 0 351 417 112 178 2.48e-12 66.6
Msa1421970 MtrunA17_Chr7g0258161 45.070 71 39 0 349 419 171 241 7.35e-12 66.2
Msa1421970 MtrunA17_Chr1g0152651 54.545 66 29 1 350 415 273 337 9.57e-12 66.2
Msa1421970 MtrunA17_Chr3g0134741 54.545 66 29 1 350 415 228 292 1.34e-11 65.5
Msa1421970 MtrunA17_Chr1g0174161 43.662 71 40 0 349 419 158 228 2.29e-11 64.7
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa1421970 AT2G42280.1 52.381 252 95 4 182 428 125 356 2.02e-71 229
Msa1421970 AT2G42280.1 35.758 165 78 4 1 147 1 155 4.10e-15 77.0
Msa1421970 AT2G42280.3 51.695 236 89 4 182 412 125 340 1.22e-62 207
Msa1421970 AT2G42280.3 35.758 165 78 4 1 147 1 155 3.29e-15 77.0
Msa1421970 AT1G51140.1 32.644 435 203 16 6 423 15 376 2.67e-44 159
Msa1421970 AT1G05805.1 39.506 243 113 9 185 423 143 355 1.73e-38 143
Msa1421970 AT1G35460.1 68.966 87 25 1 337 423 169 253 3.03e-38 139
Msa1421970 AT2G43140.1 62.857 105 38 1 320 423 102 206 2.55e-37 135
Msa1421970 AT2G43140.2 60.909 110 42 1 320 428 199 308 8.56e-37 137
Msa1421970 AT4G09180.1 65.909 88 28 1 337 424 172 257 1.38e-34 130
Msa1421970 AT2G42280.2 42.708 192 85 4 182 368 125 296 2.21e-31 122
Msa1421970 AT2G42280.2 35.758 165 78 4 1 147 1 155 4.33e-15 76.3
Msa1421970 AT1G35460.2 79.245 53 9 1 337 389 169 219 4.82e-23 97.4
Msa1421970 AT2G24260.2 60.870 69 26 1 350 418 34 101 1.93e-18 84.7
Msa1421970 AT2G24260.1 60.870 69 26 1 350 418 137 204 8.14e-18 84.7
Msa1421970 AT4G30980.1 59.420 69 27 1 350 418 129 196 1.91e-17 83.2
Msa1421970 AT4G30980.2 57.333 75 30 2 344 418 172 244 3.79e-17 82.8
Msa1421970 AT5G58010.1 55.072 69 30 1 350 418 98 165 1.58e-16 80.1
Msa1421970 AT4G34530.1 56.522 69 30 0 351 419 172 240 6.12e-16 79.0
Msa1421970 AT1G10120.2 54.930 71 32 0 351 421 206 276 1.65e-15 78.2
Msa1421970 AT1G10120.1 54.930 71 32 0 351 421 206 276 1.65e-15 78.2
Msa1421970 AT5G50915.3 56.716 67 29 0 351 417 136 202 2.14e-15 76.6
Msa1421970 AT5G50915.4 56.716 67 29 0 351 417 136 202 2.14e-15 76.6
Msa1421970 AT5G50915.1 56.716 67 29 0 351 417 136 202 2.67e-15 76.6
Msa1421970 AT5G50915.2 56.716 67 29 0 351 417 136 202 2.67e-15 76.6
Msa1421970 AT1G68920.3 52.113 71 34 0 351 421 302 372 6.82e-15 77.0
Msa1421970 AT1G68920.1 52.113 71 34 0 351 421 303 373 7.34e-15 77.0
Msa1421970 AT1G68920.4 52.113 71 34 0 351 421 303 373 7.34e-15 77.0
Msa1421970 AT1G68920.2 52.113 71 34 0 351 421 303 373 7.34e-15 77.0
Msa1421970 AT1G25330.1 45.055 91 48 2 342 431 96 185 9.45e-15 73.6
Msa1421970 AT1G26260.5 55.224 67 30 0 351 417 201 267 2.79e-14 74.3
Msa1421970 AT3G07340.2 53.731 67 31 0 351 417 258 324 3.06e-14 74.7
Msa1421970 AT1G26260.3 55.224 67 30 0 351 417 172 238 3.31e-14 73.9
Msa1421970 AT3G07340.1 53.731 67 31 0 351 417 258 324 3.35e-14 74.7
Msa1421970 AT1G26260.4 55.224 67 30 0 351 417 223 289 3.40e-14 74.3
Msa1421970 AT1G26260.1 55.224 67 30 0 351 417 223 289 3.40e-14 74.3
Msa1421970 AT1G26260.6 55.224 67 30 0 351 417 223 289 3.40e-14 74.3
Msa1421970 AT1G26260.2 55.224 67 30 0 351 417 223 289 3.40e-14 74.3
Msa1421970 AT5G48560.1 47.368 76 40 0 351 426 301 376 4.53e-14 74.3
Msa1421970 AT5G48560.2 47.368 76 40 0 351 426 301 376 4.82e-14 74.3
Msa1421970 AT3G23690.1 50.725 69 34 0 351 419 191 259 2.78e-13 71.2
Msa1421970 AT1G59640.1 50.746 67 33 0 351 417 136 202 4.44e-13 69.7
Msa1421970 AT2G42300.4 46.053 76 40 1 345 419 178 253 6.09e-13 69.3
Msa1421970 AT2G42300.1 46.053 76 40 1 345 419 178 253 6.28e-13 70.1
Msa1421970 AT1G18400.2 47.826 69 36 0 349 417 143 211 7.39e-13 68.6
Msa1421970 AT1G73830.2 49.254 67 34 0 351 417 147 213 9.35e-13 68.6
Msa1421970 AT1G73830.1 49.254 67 34 0 351 417 147 213 9.83e-13 68.6
Msa1421970 AT1G18400.1 47.826 69 36 0 349 417 143 211 1.09e-12 68.2
Msa1421970 AT2G18300.1 47.826 69 36 0 351 419 185 253 1.25e-12 68.9
Msa1421970 AT2G18300.2 47.826 69 36 0 351 419 185 253 1.28e-12 68.9
Msa1421970 AT4G36540.1 45.455 77 40 1 341 417 133 207 1.39e-12 68.6
Msa1421970 AT4G36540.2 45.455 77 40 1 341 417 133 207 1.53e-12 68.6
Msa1421970 AT1G59640.2 50.746 67 33 0 351 417 136 202 1.92e-12 68.6
Msa1421970 AT2G18300.3 47.826 69 36 0 351 419 185 253 1.96e-12 68.9
Msa1421970 AT3G57800.2 46.479 71 38 0 349 419 202 272 1.99e-12 68.9
Msa1421970 AT1G27740.1 52.857 70 32 1 346 415 162 230 9.61e-12 65.5
Msa1421970 AT2G14760.1 54.545 66 29 1 350 415 236 300 1.29e-11 65.9
Msa1421970 AT4G33880.1 54.545 66 29 1 350 415 265 329 1.41e-11 66.2
Msa1421970 AT5G62610.2 46.269 67 36 0 351 417 153 219 2.31e-11 64.7
Msa1421970 AT5G62610.1 46.269 67 36 0 351 417 153 219 2.31e-11 64.7

Find 121 sgRNAs with CRISPR-Local

Find 258 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
AACGATAATAATAATATTTC+TGG 0.136535 tig0025319:+28307 Msa1421970:CDS
ACATCACATGATAAGAATTT+TGG 0.193728 tig0025319:+28466 Msa1421970:CDS
TCTGCTATGGATGGTTCTTT+TGG 0.221242 tig0025319:+28412 Msa1421970:CDS
GGAAACTATGCCACGGTAAA+TGG 0.245415 tig0025319:+29839 Msa1421970:CDS
TACAGTAACATTATTTATAA+TGG 0.246127 tig0025319:+28111 Msa1421970:exon
GACCTACATGCTTTGAATTC+AGG 0.246604 tig0025319:-31418 None:intergenic
CAGAACCAATCCAATTCTTC+TGG 0.250255 tig0025319:+28154 Msa1421970:CDS
TTAAGAGTAAAACATTTATT+AGG 0.250342 tig0025319:-31543 None:intergenic
AAAGATAGGGATAAATAAAA+AGG 0.251395 tig0025319:-27862 None:intergenic
TGTTCTAAGGAAATGAATTC+TGG 0.257572 tig0025319:+28337 Msa1421970:CDS
TCCAACATTTCCTTTCAAAA+TGG 0.262412 tig0025319:+28532 Msa1421970:CDS
CTGGATTCCCCTATAGTTCT+TGG 0.264196 tig0025319:+30038 Msa1421970:CDS
TTCTGGTTCATCTTGTTCTA+AGG 0.264253 tig0025319:+28324 Msa1421970:CDS
CCAATATAGATTAATACTAT+TGG 0.266205 tig0025319:-31500 None:intergenic
TGAAAGGGACAAGGAAAGAT+AGG 0.311528 tig0025319:-27876 None:intergenic
CCAATAGTATTAATCTATAT+TGG 0.322787 tig0025319:+31500 Msa1421970:three_prime_UTR
ATTTGTACCTTATCCATGTT+TGG 0.331656 tig0025319:-30619 None:intergenic
TTTGGATTGGTTGGTTCATT+GGG 0.337311 tig0025319:+28430 Msa1421970:CDS
AGTATCGTTCCAAGAACTAT+AGG 0.348915 tig0025319:-30047 None:intergenic
TCAAGAAATGCTTCTTCCTT+GGG 0.356423 tig0025319:+29920 Msa1421970:CDS
ACGAAGCAACCCAGAAGAAT+TGG 0.359803 tig0025319:-28164 None:intergenic
TTCAAGAAATGCTTCTTCCT+TGG 0.367694 tig0025319:+29919 Msa1421970:CDS
CCGTTGCTACCTCCGTCATC+AGG 0.377114 tig0025319:-29995 None:intergenic
GCTCCTTCCAAGGACGTTCC+CGG 0.380905 tig0025319:-28721 None:intergenic
ACTCATCAGCGTGGAGGGCT+TGG 0.396464 tig0025319:+30226 Msa1421970:intron
GTTTGCTCGTTTATCACTTA+GGG 0.399495 tig0025319:-31276 None:intergenic
GTATCGTTCCAAGAACTATA+GGG 0.399539 tig0025319:-30046 None:intergenic
AAGGAAATGAATTCTGGTTA+TGG 0.401146 tig0025319:+28343 Msa1421970:CDS
TGAGCCCAAGCAACTTGGTT+TGG 0.405304 tig0025319:+28754 Msa1421970:CDS
ACCTACATGCTTTGAATTCA+GGG 0.417455 tig0025319:-31417 None:intergenic
ATTGGTTGGTTCATTGGGAA+TGG 0.419938 tig0025319:+28435 Msa1421970:CDS
ATAGTTTCCAACGCCTTTCA+TGG 0.421587 tig0025319:-29825 None:intergenic
TGGTTCAAATCTTCTTAGAC+AGG 0.423641 tig0025319:+28486 Msa1421970:CDS
ATGAATTCTGGTTATGGTGC+TGG 0.434475 tig0025319:+28349 Msa1421970:CDS
TGGCCAAGCGTTGTTCCCAC+TGG 0.434491 tig0025319:+28679 Msa1421970:CDS
GTATTCCCCGGGAACGTCCT+TGG 0.436340 tig0025319:+28714 Msa1421970:CDS
CTCCTTCCAAGGACGTTCCC+GGG 0.439117 tig0025319:-28720 None:intergenic
GCTTCTAGTTCTGCTATGGA+TGG 0.439803 tig0025319:+28403 Msa1421970:CDS
CAAGAGAACAAAACAAAAGT+AGG 0.444303 tig0025319:-27985 None:intergenic
AACGGTGATTCTACTCACTA+TGG 0.453244 tig0025319:+30013 Msa1421970:CDS
AGTTTGCTCGTTTATCACTT+AGG 0.455813 tig0025319:-31277 None:intergenic
TTCCCAGTGGGAACAACGCT+TGG 0.461024 tig0025319:-28682 None:intergenic
TTCTGCTTCTAGTTCTGCTA+TGG 0.461461 tig0025319:+28399 Msa1421970:CDS
GTGCGTAGAGGCATGCGCAC+TGG 0.462431 tig0025319:+28659 Msa1421970:intron
GATTCTACTCACTATGGCTC+TGG 0.464368 tig0025319:+30019 Msa1421970:CDS
AGTACAAGTTCGTGGTTCTC+TGG 0.465344 tig0025319:+29448 Msa1421970:CDS
ACCCTCTCGGCAATGCTTCG+AGG 0.468775 tig0025319:-30385 None:intergenic
AAAGTTTCTTTAGATTAAAG+TGG 0.471862 tig0025319:+31454 Msa1421970:three_prime_UTR
GCCACTGAGCCCAAGCAACT+TGG 0.472170 tig0025319:+28749 Msa1421970:CDS
CCAAACCAAACCAAGTTGCT+TGG 0.472419 tig0025319:-28759 None:intergenic
AAGGAAGAAGCATTTCTTGA+AGG 0.479751 tig0025319:-29917 None:intergenic
TCCTCGAAGCATTGCCGAGA+GGG 0.481258 tig0025319:+30384 Msa1421970:CDS
TGTAAAATTCGAGCGAAAAG+AGG 0.493630 tig0025319:+30349 Msa1421970:CDS
GCTTGTTCCAAACATGGATA+AGG 0.495622 tig0025319:+30612 Msa1421970:CDS
TCACCAGAAGAAGGAAAAGA+AGG 0.496661 tig0025319:-28226 None:intergenic
CAGAGAGAGATCAAAGTGAA+AGG 0.499422 tig0025319:-27892 None:intergenic
AGAACCAATCCAATTCTTCT+GGG 0.502541 tig0025319:+28155 Msa1421970:CDS
AGAGAGAGATCAAAGTGAAA+GGG 0.505286 tig0025319:-27891 None:intergenic
CAAACCAAACCAAGTTGCTT+GGG 0.506840 tig0025319:-28758 None:intergenic
AGGAAGAAGCATTTCTTGAA+GGG 0.507126 tig0025319:-29916 None:intergenic
ATGTTGGAGAAAAGACCAGC+AGG 0.517169 tig0025319:-28517 None:intergenic
ATCTCAGTGGTTTGAAAAGA+GGG 0.517303 tig0025319:+30086 Msa1421970:CDS
ATCATCTCAGATGACGTGTT+CGG 0.518952 tig0025319:-30286 None:intergenic
TTCAGCTTAGGAACAAAGCA+GGG 0.521484 tig0025319:-28033 None:intergenic
TTTCAGCTTAGGAACAAAGC+AGG 0.524207 tig0025319:-28034 None:intergenic
AATCTCAGTGGTTTGAAAAG+AGG 0.526692 tig0025319:+30085 Msa1421970:CDS
CCACCTCATTATCCTAGACA+TGG 0.529372 tig0025319:+28376 Msa1421970:CDS
AGGTAACCTGAGTGTTCAAT+CGG 0.530212 tig0025319:-29892 None:intergenic
TTATTAGAATCACCAGAAGA+AGG 0.532913 tig0025319:-28235 None:intergenic
AGAAGCATTTCTTGAAGGGA+AGG 0.535438 tig0025319:-29912 None:intergenic
AACTAATACATCAGACATGT+TGG 0.535882 tig0025319:+30757 Msa1421970:CDS
GAAAGGGACAAGGAAAGATA+GGG 0.536386 tig0025319:-27875 None:intergenic
AGACAGGGTAGTTCCCCTGC+TGG 0.543236 tig0025319:+28502 Msa1421970:CDS
GCAACCCAGAAGAATTGGAT+TGG 0.543641 tig0025319:-28159 None:intergenic
AAGAAGAGAAGAGGTGGCTA+TGG 0.548362 tig0025319:-27943 None:intergenic
GCAAGAGCTTGTTCCAAACA+TGG 0.548846 tig0025319:+30606 Msa1421970:CDS
GGCCAAGCGTTGTTCCCACT+GGG 0.553114 tig0025319:+28680 Msa1421970:CDS
TACATCAGACATGTTGGACT+TGG 0.558173 tig0025319:+30763 Msa1421970:CDS
GAATCGAACTCGGTATTCCC+CGG 0.558333 tig0025319:+28702 Msa1421970:CDS
CTAAGATCAGTGAAAGAATG+AGG 0.559063 tig0025319:+30578 Msa1421970:CDS
TTCCCACTGGGAATCGAACT+CGG 0.563385 tig0025319:+28692 Msa1421970:CDS
CGCAATTCAAAGAAGAGAAG+AGG 0.564503 tig0025319:-27952 None:intergenic
CGTTGCTACCTCCGTCATCA+GGG 0.572371 tig0025319:-29994 None:intergenic
CTAGAAGCAGAACCATGTCT+AGG 0.577677 tig0025319:-28388 None:intergenic
GAGCAAACTGCAAATGTATG+AGG 0.578835 tig0025319:+31291 Msa1421970:CDS
TCCCCGGGAACGTCCTTGGA+AGG 0.580649 tig0025319:+28718 Msa1421970:CDS
ACCAAGTTGCTTGGGCTCAG+TGG 0.586686 tig0025319:-28750 None:intergenic
TTCGCAAAAGTACTGAGAGT+TGG 0.587857 tig0025319:+29419 Msa1421970:CDS
GTTGCTTGGGCTCAGTGGCA+AGG 0.590030 tig0025319:-28745 None:intergenic
GTGGCAAGGAGCTCCTTCCA+AGG 0.591784 tig0025319:-28731 None:intergenic
GGTATGCGAGTACAAGTTCG+TGG 0.592023 tig0025319:+29440 Msa1421970:CDS
AATCGAACTCGGTATTCCCC+GGG 0.593437 tig0025319:+28703 Msa1421970:CDS
GAACCATGTCTAGGATAATG+AGG 0.594617 tig0025319:-28379 None:intergenic
GTCATCTGAGATGATTGCTA+TGG 0.594714 tig0025319:+30294 Msa1421970:CDS
AGATCAAAGTGAAAGGGACA+AGG 0.595140 tig0025319:-27885 None:intergenic
TAAACAAAATCATACCCTCT+CGG 0.600646 tig0025319:-30398 None:intergenic
GCCACGGTAAATGGTAGTAA+CGG 0.609242 tig0025319:+29848 Msa1421970:CDS
CCTGATGACGGAGGTAGCAA+CGG 0.614696 tig0025319:+29995 Msa1421970:CDS
TATCGTTCCAAGAACTATAG+GGG 0.622302 tig0025319:-30045 None:intergenic
TCCTTCCAAGGACGTTCCCG+GGG 0.622327 tig0025319:-28719 None:intergenic
GGTTCAAATCTTCTTAGACA+GGG 0.631058 tig0025319:+28487 Msa1421970:CDS
GCCGTTACTACCATTTACCG+TGG 0.637465 tig0025319:-29849 None:intergenic
GAAGCAACTAGCCCTGATGA+CGG 0.637823 tig0025319:+29983 Msa1421970:CDS
TATCTCTGAAATAGATAGCG+AGG 0.637851 tig0025319:+29955 Msa1421970:CDS
GTGTTCAATCGGTTAATAGA+CGG 0.638059 tig0025319:-29881 None:intergenic
TGTTGGAGAAAAGACCAGCA+GGG 0.641864 tig0025319:-28516 None:intergenic
GATATGTGACAATATTCCCA+AGG 0.645646 tig0025319:-29936 None:intergenic
TACCGAGTTCGATTCCCAGT+GGG 0.652274 tig0025319:-28694 None:intergenic
AATTCAAAGAAGAGAAGAGG+TGG 0.659106 tig0025319:-27949 None:intergenic
ACCCTGAATTCAAAGCATGT+AGG 0.668934 tig0025319:+31416 Msa1421970:three_prime_UTR
TATTAACCGATTGAACACTC+AGG 0.669123 tig0025319:+29886 Msa1421970:CDS
TCAGCTTAGGAACAAAGCAG+GGG 0.671703 tig0025319:-28032 None:intergenic
CTAATCCGGCTAGTGCGTAG+AGG 0.675720 tig0025319:+28647 Msa1421970:intron
GTTGGAGAAAAGACCAGCAG+GGG 0.676212 tig0025319:-28515 None:intergenic
AGGCGTTGGAAACTATGCCA+CGG 0.680755 tig0025319:+29832 Msa1421970:CDS
ATCCTCGAAGCATTGCCGAG+AGG 0.702830 tig0025319:+30383 Msa1421970:CDS
CAAATGTATGAGGATGCAGA+AGG 0.707448 tig0025319:+31301 Msa1421970:CDS
GCAACTAGCCCTGATGACGG+AGG 0.713476 tig0025319:+29986 Msa1421970:CDS
CCATGTCTAGGATAATGAGG+TGG 0.720480 tig0025319:-28376 None:intergenic
TCATTCACAGAAAATCTCAG+TGG 0.729969 tig0025319:+30073 Msa1421970:CDS
ATACCGAGTTCGATTCCCAG+TGG 0.745051 tig0025319:-28695 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! TTAATTAATTAATTAATTAA+TGG + tig0025319:30684-30703 Msa1421970:intron 0.0%
!! AAAAAAAAAAATGATTATGA+TGG + tig0025319:29110-29129 Msa1421970:intron 10.0%
!!! AAGTTATATTTTTCATTAAT+AGG + tig0025319:29282-29301 Msa1421970:intron 10.0%
!! TACAGTAACATTATTTATAA+TGG + tig0025319:28111-28130 Msa1421970:exon 15.0%
!!! ATAAAGTTACTAAACATTTT+TGG + tig0025319:28254-28273 Msa1421970:CDS 15.0%
!!! TAAAGTTACTAAACATTTTT+GGG + tig0025319:28255-28274 Msa1421970:CDS 15.0%
!! AACGATAATAATAATATTTC+TGG + tig0025319:28307-28326 Msa1421970:CDS 15.0%
!!! TATGTTTTATGTTGTTATTT+TGG + tig0025319:28558-28577 Msa1421970:intron 15.0%
!! ATTTATTGAATGAATCTAAA+AGG - tig0025319:29552-29571 None:intergenic 15.0%
!! TATATACAATTCATTCTTAA+TGG + tig0025319:29764-29783 Msa1421970:intron 15.0%
!! ATTTATGAAATTATAACCAT+CGG - tig0025319:31174-31193 None:intergenic 15.0%
!!! TATATTGGTAATTTTGTATA+GGG + tig0025319:31515-31534 Msa1421970:three_prime_UTR 15.0%
!! TTAAGAGTAAAACATTTATT+AGG - tig0025319:31546-31565 None:intergenic 15.0%
!! AAGATAGGGATAAATAAAAA+GGG - tig0025319:27864-27883 None:intergenic 20.0%
!! AAAGATAGGGATAAATAAAA+AGG - tig0025319:27865-27884 None:intergenic 20.0%
!! TTACTGTAAAAAGATGAAAA+GGG - tig0025319:28099-28118 None:intergenic 20.0%
!!! AAACATATTACCATTTTGAA+AGG - tig0025319:28545-28564 None:intergenic 20.0%
!!! TTTATGTTGTTATTTTGGTT+TGG + tig0025319:28563-28582 Msa1421970:intron 20.0%
!! TATGAGTAATGATATTAATG+AGG + tig0025319:28862-28881 Msa1421970:intron 20.0%
!!! TATGAATGATTTTTTGTTGT+AGG + tig0025319:28930-28949 Msa1421970:intron 20.0%
!!! ATGAATGATTTTTTGTTGTA+GGG + tig0025319:28931-28950 Msa1421970:intron 20.0%
!!! TTAATGTTGTTTTAGTTTTC+TGG + tig0025319:28970-28989 Msa1421970:intron 20.0%
!! GAATTTAATGATTCAATTTG+TGG + tig0025319:29165-29184 Msa1421970:intron 20.0%
!!! TTTTCATTAATAGGATATGA+AGG + tig0025319:29291-29310 Msa1421970:intron 20.0%
!! TTTCATTAATAGGATATGAA+GGG + tig0025319:29292-29311 Msa1421970:intron 20.0%
!!! AAAAATGTTTTCTGATATTC+AGG + tig0025319:30123-30142 Msa1421970:CDS 20.0%
!! AAATCTTCAAAAACAATTCA+AGG + tig0025319:30802-30821 Msa1421970:CDS 20.0%
!! ATATATAAGGAGAGATAATT+TGG + tig0025319:30828-30847 Msa1421970:intron 20.0%
!! TTGCTAATTCATAAAAGTTA+TGG - tig0025319:30929-30948 None:intergenic 20.0%
!! TAATAGCTAAACTTAATTCA+GGG + tig0025319:31138-31157 Msa1421970:intron 20.0%
!! AAAGTTTCTTTAGATTAAAG+TGG + tig0025319:31454-31473 Msa1421970:three_prime_UTR 20.0%
!! CCAATATAGATTAATACTAT+TGG - tig0025319:31503-31522 None:intergenic 20.0%
!! CCAATAGTATTAATCTATAT+TGG + tig0025319:31500-31519 Msa1421970:three_prime_UTR 20.0%
!!! CTATATTGGTAATTTTGTAT+AGG + tig0025319:31514-31533 Msa1421970:three_prime_UTR 20.0%
!!! ATATTGGTAATTTTGTATAG+GGG + tig0025319:31516-31535 Msa1421970:three_prime_UTR 20.0%
! ATTCAAAAAAGTTTCAGCTT+AGG - tig0025319:28048-28067 None:intergenic 25.0%
!! TTCTCTGTTTTCACATATAA+TGG + tig0025319:28070-28089 Msa1421970:five_prime_UTR 25.0%
! GTTACTGTAAAAAGATGAAA+AGG - tig0025319:28100-28119 None:intergenic 25.0%
!! ACATCACATGATAAGAATTT+TGG + tig0025319:28466-28485 Msa1421970:CDS 25.0%
! TTTGGTTATTTATAGTTGCA+GGG + tig0025319:28777-28796 Msa1421970:intron 25.0%
! ATTAATGAGGATATGTGTAT+TGG + tig0025319:28875-28894 Msa1421970:intron 25.0%
!! TAATGAGAATATTGCTACTT+TGG + tig0025319:29027-29046 Msa1421970:intron 25.0%
! AATTGTGGTATGTATGAAAA+TGG + tig0025319:29086-29105 Msa1421970:intron 25.0%
! TTCATTAATAGGATATGAAG+GGG + tig0025319:29293-29312 Msa1421970:intron 25.0%
!! AATTTGCTTATAATAGTGAC+CGG - tig0025319:29634-29653 None:intergenic 25.0%
! CATTCAATAAATGATGTATG+TGG + tig0025319:29560-29579 Msa1421970:intron 25.0%
! CATTTAATAGATGATGTATG+TGG - tig0025319:29599-29618 None:intergenic 25.0%
!! AATTTGCTTATAATAGTGAC+CGG + tig0025319:29634-29653 Msa1421970:intron 25.0%
!! CTGAAAAATCTGAAATGTTA+TGG + tig0025319:29684-29703 Msa1421970:intron 25.0%
! TCATTCTTAATGGTTATTGA+TGG + tig0025319:29774-29793 Msa1421970:intron 25.0%
! AGAAGCTTGAAAAAACTAAT+TGG - tig0025319:30434-30453 None:intergenic 25.0%
!! TTGAAGAAGTAACTATTTTC+AGG + tig0025319:30546-30565 Msa1421970:intron 25.0%
!!! ACATCAATTTTGTTTGACTT+TGG + tig0025319:30647-30666 Msa1421970:intron 25.0%
!! TGTTTGACTTTGGAAAATAT+TGG + tig0025319:30657-30676 Msa1421970:intron 25.0%
! ATTAATGGTATAGTTGTGTT+TGG + tig0025319:30703-30722 Msa1421970:intron 25.0%
! CAATTCAAGGTACATATATA+AGG + tig0025319:30815-30834 Msa1421970:intron 25.0%
!! AATTAGCAATAATGATGATG+TGG + tig0025319:30940-30959 Msa1421970:intron 25.0%
! TTATGCACTAGTAAAATCTT+AGG + tig0025319:31024-31043 Msa1421970:intron 25.0%
! CTAATAGCTAAACTTAATTC+AGG + tig0025319:31137-31156 Msa1421970:intron 25.0%
! TCAATCACTATGATGATAAA+GGG - tig0025319:31211-31230 None:intergenic 25.0%
! ATCAATCACTATGATGATAA+AGG - tig0025319:31212-31231 None:intergenic 25.0%
! TCATAGTGATTGATATTAAC+TGG + tig0025319:31218-31237 Msa1421970:intron 25.0%
!! TCTAAAGAAACTTTTTGTTG+TGG - tig0025319:31448-31467 None:intergenic 25.0%
!!! TATTGGTAATTTTGTATAGG+GGG + tig0025319:31517-31536 Msa1421970:three_prime_UTR 25.0%
!! TTTTGAAAAGAGTGAAAGAG+AGG - tig0025319:27805-27824 None:intergenic 30.0%
CAAGAGAACAAAACAAAAGT+AGG - tig0025319:27988-28007 None:intergenic 30.0%
!!! AGATTTTGAAACAGTGAACT+AGG - tig0025319:28202-28221 None:intergenic 30.0%
TTATTAGAATCACCAGAAGA+AGG - tig0025319:28238-28257 None:intergenic 30.0%
!! GTTACTAAACATTTTTGGGA+TGG + tig0025319:28259-28278 Msa1421970:CDS 30.0%
!! TGTTCTAAGGAAATGAATTC+TGG + tig0025319:28337-28356 Msa1421970:CDS 30.0%
! AAGGAAATGAATTCTGGTTA+TGG + tig0025319:28343-28362 Msa1421970:CDS 30.0%
TCCAACATTTCCTTTCAAAA+TGG + tig0025319:28532-28551 Msa1421970:CDS 30.0%
!! ACCATTTTGAAAGGAAATGT+TGG - tig0025319:28536-28555 None:intergenic 30.0%
!!! TTTATTTTTGGCTTTCGCAT+TGG + tig0025319:28599-28618 Msa1421970:intron 30.0%
GTTTGGTTATTTATAGTTGC+AGG + tig0025319:28776-28795 Msa1421970:intron 30.0%
ATGGTGACATGTACAATTTA+TGG + tig0025319:29129-29148 Msa1421970:intron 30.0%
AGATTCACTCAATTCAAACT+AGG - tig0025319:29231-29250 None:intergenic 30.0%
!!! GGTAGAAAGTAGTTTTTTTG+TGG + tig0025319:29259-29278 Msa1421970:intron 30.0%
! AAGGGAAATAAAAGCATAAG+TGG - tig0025319:29346-29365 None:intergenic 30.0%
AATTCACAAAAGCTCATGTA+GGG - tig0025319:29376-29395 None:intergenic 30.0%
! ATTTTACAAGGAACAGAATC+TGG - tig0025319:30337-30356 None:intergenic 30.0%
TAAACAAAATCATACCCTCT+CGG - tig0025319:30401-30420 None:intergenic 30.0%
ATTTGTACCTTATCCATGTT+TGG - tig0025319:30622-30641 None:intergenic 30.0%
TTGACATTTCTTCATGTTCT+TGG + tig0025319:30729-30748 Msa1421970:intron 30.0%
AACTAATACATCAGACATGT+TGG + tig0025319:30757-30776 Msa1421970:CDS 30.0%
!! AAGGAGAGATAATTTGGTTT+TGG + tig0025319:30834-30853 Msa1421970:intron 30.0%
AATTTCCGTTTCACTTGTAA+GGG - tig0025319:30871-30890 None:intergenic 30.0%
AAATTTCCGTTTCACTTGTA+AGG - tig0025319:30872-30891 None:intergenic 30.0%
GATCGATAGTTACAATTTCA+GGG - tig0025319:30898-30917 None:intergenic 30.0%
TGATCGATAGTTACAATTTC+AGG - tig0025319:30899-30918 None:intergenic 30.0%
TCATTTCATTCTTATAGACG+TGG - tig0025319:30992-31011 None:intergenic 30.0%
TAGCAACTGAGTTAAGTTAA+CGG - tig0025319:31060-31079 None:intergenic 30.0%
ACTGCAAGTAATAGAAAAAG+GGG - tig0025319:31256-31275 None:intergenic 30.0%
GACTGCAAGTAATAGAAAAA+GGG - tig0025319:31257-31276 None:intergenic 30.0%
AGAGAGAGATCAAAGTGAAA+GGG - tig0025319:27894-27913 None:intergenic 35.0%
AATTCAAAGAAGAGAAGAGG+TGG - tig0025319:27952-27971 None:intergenic 35.0%
AGAACCAATCCAATTCTTCT+GGG + tig0025319:28155-28174 Msa1421970:CDS 35.0%
!! TTCTGGTTCATCTTGTTCTA+AGG + tig0025319:28324-28343 Msa1421970:CDS 35.0%
! TATGGATGGTTCTTTTGGAT+TGG + tig0025319:28417-28436 Msa1421970:CDS 35.0%
!!! TTTTGGATTGGTTGGTTCAT+TGG + tig0025319:28429-28448 Msa1421970:CDS 35.0%
!! TTTGGATTGGTTGGTTCATT+GGG + tig0025319:28430-28449 Msa1421970:CDS 35.0%
TGGTTCAAATCTTCTTAGAC+AGG + tig0025319:28486-28505 Msa1421970:CDS 35.0%
GGTTCAAATCTTCTTAGACA+GGG + tig0025319:28487-28506 Msa1421970:CDS 35.0%
!! TTTGTTGTAGGGTGTTCTTT+TGG + tig0025319:28942-28961 Msa1421970:intron 35.0%
GTTAATTGCAATCACCTACA+AGG + tig0025319:29058-29077 Msa1421970:intron 35.0%
ATTGAGTGAATCTCAGCTTT+AGG + tig0025319:29238-29257 Msa1421970:intron 35.0%
TAATAGGATATGAAGGGGAT+TGG + tig0025319:29298-29317 Msa1421970:intron 35.0%
CAATTCACAAAAGCTCATGT+AGG - tig0025319:29377-29396 None:intergenic 35.0%
TTGTGAATTGTTCGCGAATT+AGG + tig0025319:29387-29406 Msa1421970:intron 35.0%
! TACAGTTTTTATACTTCCGC+CGG + tig0025319:29503-29522 Msa1421970:intron 35.0%
ATGTATGTGGTCTACATTGT+AGG + tig0025319:29573-29592 Msa1421970:intron 35.0%
TAATACAAATGTACTCCCTC+CGG - tig0025319:29656-29675 None:intergenic 35.0%
! TGGTAATGTTCATTAGTTGC+AGG + tig0025319:29794-29813 Msa1421970:intron 35.0%
GGTAATGTTCATTAGTTGCA+GGG + tig0025319:29795-29814 Msa1421970:intron 35.0%
GTGTTCAATCGGTTAATAGA+CGG - tig0025319:29884-29903 None:intergenic 35.0%
TATTAACCGATTGAACACTC+AGG + tig0025319:29886-29905 Msa1421970:CDS 35.0%
!! AGGAAGAAGCATTTCTTGAA+GGG - tig0025319:29919-29938 None:intergenic 35.0%
!! AAGGAAGAAGCATTTCTTGA+AGG - tig0025319:29920-29939 None:intergenic 35.0%
TTCAAGAAATGCTTCTTCCT+TGG + tig0025319:29919-29938 Msa1421970:CDS 35.0%
TCAAGAAATGCTTCTTCCTT+GGG + tig0025319:29920-29939 Msa1421970:CDS 35.0%
GATATGTGACAATATTCCCA+AGG - tig0025319:29939-29958 None:intergenic 35.0%
!! TATCTCTGAAATAGATAGCG+AGG + tig0025319:29955-29974 Msa1421970:CDS 35.0%
TATCGTTCCAAGAACTATAG+GGG - tig0025319:30048-30067 None:intergenic 35.0%
GTATCGTTCCAAGAACTATA+GGG - tig0025319:30049-30068 None:intergenic 35.0%
AGTATCGTTCCAAGAACTAT+AGG - tig0025319:30050-30069 None:intergenic 35.0%
TCATTCACAGAAAATCTCAG+TGG + tig0025319:30073-30092 Msa1421970:CDS 35.0%
AATCTCAGTGGTTTGAAAAG+AGG + tig0025319:30085-30104 Msa1421970:CDS 35.0%
ATCTCAGTGGTTTGAAAAGA+GGG + tig0025319:30086-30105 Msa1421970:CDS 35.0%
TCTGATATTCAGGTATGTGT+AGG + tig0025319:30133-30152 Msa1421970:intron 35.0%
! GAAGCTCACTTCACTTATTT+TGG + tig0025319:30155-30174 Msa1421970:intron 35.0%
!!! ATTTGTTTTACTCATCAGCG+TGG + tig0025319:30217-30236 Msa1421970:intron 35.0%
! CTTTTCGCTCGAATTTTACA+AGG - tig0025319:30349-30368 None:intergenic 35.0%
TGTAAAATTCGAGCGAAAAG+AGG + tig0025319:30349-30368 Msa1421970:CDS 35.0%
CTAAGATCAGTGAAAGAATG+AGG + tig0025319:30578-30597 Msa1421970:CDS 35.0%
AATGGTATAGTTGTGTTTGG+AGG + tig0025319:30706-30725 Msa1421970:intron 35.0%
! TGATGATGTGGAATTTCATG+TGG + tig0025319:30952-30971 Msa1421970:intron 35.0%
AGCAACTGAGTTAAGTTAAC+GGG - tig0025319:31059-31078 None:intergenic 35.0%
GGACTGCAAGTAATAGAAAA+AGG - tig0025319:31258-31277 None:intergenic 35.0%
GTTTGCTCGTTTATCACTTA+GGG - tig0025319:31279-31298 None:intergenic 35.0%
! AGTTTGCTCGTTTATCACTT+AGG - tig0025319:31280-31299 None:intergenic 35.0%
! ACCTACATGCTTTGAATTCA+GGG - tig0025319:31420-31439 None:intergenic 35.0%
!! AGAAACTTTTTGTTGTGGTG+AGG - tig0025319:31443-31462 None:intergenic 35.0%
GAAAGGGACAAGGAAAGATA+GGG - tig0025319:27878-27897 None:intergenic 40.0%
TGAAAGGGACAAGGAAAGAT+AGG - tig0025319:27879-27898 None:intergenic 40.0%
AGATCAAAGTGAAAGGGACA+AGG - tig0025319:27888-27907 None:intergenic 40.0%
CAGAGAGAGATCAAAGTGAA+AGG - tig0025319:27895-27914 None:intergenic 40.0%
CGCAATTCAAAGAAGAGAAG+AGG - tig0025319:27955-27974 None:intergenic 40.0%
TTCAGCTTAGGAACAAAGCA+GGG - tig0025319:28036-28055 None:intergenic 40.0%
TTTCAGCTTAGGAACAAAGC+AGG - tig0025319:28037-28056 None:intergenic 40.0%
CAGAACCAATCCAATTCTTC+TGG + tig0025319:28154-28173 Msa1421970:CDS 40.0%
! ACACCTTCTTTTCCTTCTTC+TGG + tig0025319:28223-28242 Msa1421970:CDS 40.0%
TCACCAGAAGAAGGAAAAGA+AGG - tig0025319:28229-28248 None:intergenic 40.0%
! ATGAATTCTGGTTATGGTGC+TGG + tig0025319:28349-28368 Msa1421970:CDS 40.0%
! GAACCATGTCTAGGATAATG+AGG - tig0025319:28382-28401 None:intergenic 40.0%
!! TTCTGCTTCTAGTTCTGCTA+TGG + tig0025319:28399-28418 Msa1421970:CDS 40.0%
! TCTGCTATGGATGGTTCTTT+TGG + tig0025319:28412-28431 Msa1421970:CDS 40.0%
!!! GATGGTTCTTTTGGATTGGT+TGG + tig0025319:28421-28440 Msa1421970:CDS 40.0%
! ATTGGTTGGTTCATTGGGAA+TGG + tig0025319:28435-28454 Msa1421970:CDS 40.0%
CAAACCAAACCAAGTTGCTT+GGG - tig0025319:28761-28780 None:intergenic 40.0%
!! ATAGTTGCAGGGTGTTCTTT+TGG + tig0025319:28788-28807 Msa1421970:intron 40.0%
ACCTACAAGGCTAGAAATTG+TGG + tig0025319:29071-29090 Msa1421970:intron 40.0%
!! ACCACAATTTCTAGCCTTGT+AGG - tig0025319:29075-29094 None:intergenic 40.0%
CTCATGTAGGGTGACAAAAA+GGG - tig0025319:29364-29383 None:intergenic 40.0%
! CTCTCAGTACTTTTGCGAAT+TGG - tig0025319:29418-29437 None:intergenic 40.0%
!! TTCGCAAAAGTACTGAGAGT+TGG + tig0025319:29419-29438 Msa1421970:CDS 40.0%
TTGCTTATAATAGTGACCGG+CGG - tig0025319:29637-29656 None:intergenic 40.0%
TTGCTTATAATAGTGACCGG+AGG + tig0025319:29637-29656 Msa1421970:intron 40.0%
TGCTTATAATAGTGACCGGA+GGG + tig0025319:29638-29657 Msa1421970:intron 40.0%
TAACAACCTAAGATGCAGGT+GGG - tig0025319:29728-29747 None:intergenic 40.0%
TTAACAACCTAAGATGCAGG+TGG - tig0025319:29729-29748 None:intergenic 40.0%
GTCTTAACAACCTAAGATGC+AGG - tig0025319:29732-29751 None:intergenic 40.0%
ATAGTTTCCAACGCCTTTCA+TGG - tig0025319:29828-29847 None:intergenic 40.0%
AGGTAACCTGAGTGTTCAAT+CGG - tig0025319:29895-29914 None:intergenic 40.0%
!! AGAAGCATTTCTTGAAGGGA+AGG - tig0025319:29915-29934 None:intergenic 40.0%
AACGGTGATTCTACTCACTA+TGG + tig0025319:30013-30032 Msa1421970:CDS 40.0%
ATCATCTCAGATGACGTGTT+CGG - tig0025319:30289-30308 None:intergenic 40.0%
! GTCATCTGAGATGATTGCTA+TGG + tig0025319:30294-30313 Msa1421970:CDS 40.0%
GCTTGTTCCAAACATGGATA+AGG + tig0025319:30612-30631 Msa1421970:CDS 40.0%
TACATCAGACATGTTGGACT+TGG + tig0025319:30763-30782 Msa1421970:CDS 40.0%
GCAACTGAGTTAAGTTAACG+GGG - tig0025319:31058-31077 None:intergenic 40.0%
TTAACTCAGTTGCTATGACG+TGG + tig0025319:31065-31084 Msa1421970:intron 40.0%
! TCAGGGATGAATTTTACCGA+TGG + tig0025319:31155-31174 Msa1421970:intron 40.0%
GAGCAAACTGCAAATGTATG+AGG + tig0025319:31291-31310 Msa1421970:CDS 40.0%
CAAATGTATGAGGATGCAGA+AGG + tig0025319:31301-31320 Msa1421970:CDS 40.0%
ACCCTGAATTCAAAGCATGT+AGG + tig0025319:31416-31435 Msa1421970:three_prime_UTR 40.0%
! GACCTACATGCTTTGAATTC+AGG - tig0025319:31421-31440 None:intergenic 40.0%
AAGAAGAGAAGAGGTGGCTA+TGG - tig0025319:27946-27965 None:intergenic 45.0%
TCAGCTTAGGAACAAAGCAG+GGG - tig0025319:28035-28054 None:intergenic 45.0%
GCAACCCAGAAGAATTGGAT+TGG - tig0025319:28162-28181 None:intergenic 45.0%
ACGAAGCAACCCAGAAGAAT+TGG - tig0025319:28167-28186 None:intergenic 45.0%
! CCATGTCTAGGATAATGAGG+TGG - tig0025319:28379-28398 None:intergenic 45.0%
CCACCTCATTATCCTAGACA+TGG + tig0025319:28376-28395 Msa1421970:CDS 45.0%
CTAGAAGCAGAACCATGTCT+AGG - tig0025319:28391-28410 None:intergenic 45.0%
!! GCTTCTAGTTCTGCTATGGA+TGG + tig0025319:28403-28422 Msa1421970:CDS 45.0%
TGTTGGAGAAAAGACCAGCA+GGG - tig0025319:28519-28538 None:intergenic 45.0%
ATGTTGGAGAAAAGACCAGC+AGG - tig0025319:28520-28539 None:intergenic 45.0%
ATTAGTCGCCTACCATTGGT+GGG - tig0025319:28632-28651 None:intergenic 45.0%
CCAAACCAAACCAAGTTGCT+TGG - tig0025319:28762-28781 None:intergenic 45.0%
!! CCAAGCAACTTGGTTTGGTT+TGG + tig0025319:28759-28778 Msa1421970:intron 45.0%
GCTCATGTAGGGTGACAAAA+AGG - tig0025319:29365-29384 None:intergenic 45.0%
AGTACAAGTTCGTGGTTCTC+TGG + tig0025319:29448-29467 Msa1421970:CDS 45.0%
TGATATCCCACCTGCATCTT+AGG + tig0025319:29719-29738 Msa1421970:intron 45.0%
!! TTTTCTGCCATGAAAGGCGT+TGG + tig0025319:29818-29837 Msa1421970:CDS 45.0%
GGAAACTATGCCACGGTAAA+TGG + tig0025319:29839-29858 Msa1421970:CDS 45.0%
GCCACGGTAAATGGTAGTAA+CGG + tig0025319:29848-29867 Msa1421970:CDS 45.0%
GATTCTACTCACTATGGCTC+TGG + tig0025319:30019-30038 Msa1421970:CDS 45.0%
CTGGATTCCCCTATAGTTCT+TGG + tig0025319:30038-30057 Msa1421970:CDS 45.0%
! TGTTTTACTCATCAGCGTGG+AGG + tig0025319:30220-30239 Msa1421970:intron 45.0%
! GTTTTACTCATCAGCGTGGA+GGG + tig0025319:30221-30240 Msa1421970:intron 45.0%
! GCAAGAGCTTGTTCCAAACA+TGG + tig0025319:30606-30625 Msa1421970:CDS 45.0%
TCCCACCCTTACAAGTGAAA+CGG + tig0025319:30863-30882 Msa1421970:intron 45.0%
TCCGTTTCACTTGTAAGGGT+GGG - tig0025319:30867-30886 None:intergenic 45.0%
TTCCGTTTCACTTGTAAGGG+TGG - tig0025319:30868-30887 None:intergenic 45.0%
TTATAGACGTGGCAGTGTTG+TGG - tig0025319:30981-31000 None:intergenic 45.0%
!!! TATTTATTTTACTTTATTTT+TGG + tig0025319:28587-28606 Msa1421970:intron 5.0%
GTTGGAGAAAAGACCAGCAG+GGG - tig0025319:28518-28537 None:intergenic 50.0%
! ATTGGTTTCCGACCCACCAA+TGG + tig0025319:28617-28636 Msa1421970:intron 50.0%
! GATTAGTCGCCTACCATTGG+TGG - tig0025319:28633-28652 None:intergenic 50.0%
CCAATGGTAGGCGACTAATC+CGG + tig0025319:28633-28652 Msa1421970:intron 50.0%
TTCCCACTGGGAATCGAACT+CGG + tig0025319:28692-28711 Msa1421970:CDS 50.0%
TACCGAGTTCGATTCCCAGT+GGG - tig0025319:28697-28716 None:intergenic 50.0%
ATACCGAGTTCGATTCCCAG+TGG - tig0025319:28698-28717 None:intergenic 50.0%
GAATCGAACTCGGTATTCCC+CGG + tig0025319:28702-28721 Msa1421970:CDS 50.0%
AATCGAACTCGGTATTCCCC+GGG + tig0025319:28703-28722 Msa1421970:CDS 50.0%
TGAGCCCAAGCAACTTGGTT+TGG + tig0025319:28754-28773 Msa1421970:CDS 50.0%
GGTATGCGAGTACAAGTTCG+TGG + tig0025319:29440-29459 Msa1421970:CDS 50.0%
TCGTGGTTCTCTGGTGAATG+CGG + tig0025319:29457-29476 Msa1421970:intron 50.0%
! GCAGGGTTTTCTGCCATGAA+AGG + tig0025319:29812-29831 Msa1421970:intron 50.0%
!! AGGCGTTGGAAACTATGCCA+CGG + tig0025319:29832-29851 Msa1421970:CDS 50.0%
GCCGTTACTACCATTTACCG+TGG - tig0025319:29852-29871 None:intergenic 50.0%
GAAGCAACTAGCCCTGATGA+CGG + tig0025319:29983-30002 Msa1421970:CDS 50.0%
GTTTCCGACCCACCAATGGT+AGG + tig0025319:28621-28640 Msa1421970:intron 55.0%
!! CCGGATTAGTCGCCTACCAT+TGG - tig0025319:28636-28655 None:intergenic 55.0%
CTAATCCGGCTAGTGCGTAG+AGG + tig0025319:28647-28666 Msa1421970:intron 55.0%
TTCCCAGTGGGAACAACGCT+TGG - tig0025319:28685-28704 None:intergenic 55.0%
ACCAAGTTGCTTGGGCTCAG+TGG - tig0025319:28753-28772 None:intergenic 55.0%
CGTTGCTACCTCCGTCATCA+GGG - tig0025319:29997-30016 None:intergenic 55.0%
!! CCTGATGACGGAGGTAGCAA+CGG + tig0025319:29995-30014 Msa1421970:CDS 55.0%
!! ATCCTCGAAGCATTGCCGAG+AGG + tig0025319:30383-30402 Msa1421970:CDS 55.0%
!! TCCTCGAAGCATTGCCGAGA+GGG + tig0025319:30384-30403 Msa1421970:CDS 55.0%
AGACAGGGTAGTTCCCCTGC+TGG + tig0025319:28502-28521 Msa1421970:CDS 60.0%
! GTCGCCTACCATTGGTGGGT+CGG - tig0025319:28628-28647 None:intergenic 60.0%
GCATGCCTCTACGCACTAGC+CGG - tig0025319:28655-28674 None:intergenic 60.0%
! TGGCCAAGCGTTGTTCCCAC+TGG + tig0025319:28679-28698 Msa1421970:CDS 60.0%
! GGCCAAGCGTTGTTCCCACT+GGG + tig0025319:28680-28699 Msa1421970:CDS 60.0%
GTATTCCCCGGGAACGTCCT+TGG + tig0025319:28714-28733 Msa1421970:CDS 60.0%
TCCTTCCAAGGACGTTCCCG+GGG - tig0025319:28722-28741 None:intergenic 60.0%
CTCCTTCCAAGGACGTTCCC+GGG - tig0025319:28723-28742 None:intergenic 60.0%
GCTCCTTCCAAGGACGTTCC+CGG - tig0025319:28724-28743 None:intergenic 60.0%
GTGGCAAGGAGCTCCTTCCA+AGG - tig0025319:28734-28753 None:intergenic 60.0%
GTTGCTTGGGCTCAGTGGCA+AGG - tig0025319:28748-28767 None:intergenic 60.0%
GCCACTGAGCCCAAGCAACT+TGG + tig0025319:28749-28768 Msa1421970:CDS 60.0%
!! GCAACTAGCCCTGATGACGG+AGG + tig0025319:29986-30005 Msa1421970:CDS 60.0%
CCGTTGCTACCTCCGTCATC+AGG - tig0025319:29998-30017 None:intergenic 60.0%
ACTCATCAGCGTGGAGGGCT+TGG + tig0025319:30226-30245 Msa1421970:intron 60.0%
ACCCTCTCGGCAATGCTTCG+AGG - tig0025319:30388-30407 None:intergenic 60.0%
! GTGCGTAGAGGCATGCGCAC+TGG + tig0025319:28659-28678 Msa1421970:intron 65.0%
TCCCCGGGAACGTCCTTGGA+AGG + tig0025319:28718-28737 Msa1421970:CDS 65.0%
Chromosome Type Strat End Strand Name
tig0025319 gene 27764 31619 27764 ID=Msa1421970;Name=Msa1421970
tig0025319 mRNA 27764 31619 27764 ID=Msa1421970-mRNA-1;Parent=Msa1421970;Name=Msa1421970-mRNA-1;_AED=0.16;_eAED=0.16;_QI=366|0.57|0.75|0.75|1|1|8|273|435
tig0025319 exon 27764 28553 27764 ID=Msa1421970-mRNA-1:exon:2363;Parent=Msa1421970-mRNA-1
tig0025319 exon 28660 28775 28660 ID=Msa1421970-mRNA-1:exon:2364;Parent=Msa1421970-mRNA-1
tig0025319 exon 29409 29469 29409 ID=Msa1421970-mRNA-1:exon:2365;Parent=Msa1421970-mRNA-1
tig0025319 exon 29816 30144 29816 ID=Msa1421970-mRNA-1:exon:2366;Parent=Msa1421970-mRNA-1
tig0025319 exon 30235 30405 30235 ID=Msa1421970-mRNA-1:exon:2367;Parent=Msa1421970-mRNA-1
tig0025319 exon 30568 30633 30568 ID=Msa1421970-mRNA-1:exon:2368;Parent=Msa1421970-mRNA-1
tig0025319 exon 30755 30823 30755 ID=Msa1421970-mRNA-1:exon:2369;Parent=Msa1421970-mRNA-1
tig0025319 exon 31275 31619 31275 ID=Msa1421970-mRNA-1:exon:2370;Parent=Msa1421970-mRNA-1
tig0025319 five_prime_UTR 27764 28129 27764 ID=Msa1421970-mRNA-1:five_prime_utr;Parent=Msa1421970-mRNA-1
tig0025319 CDS 28130 28553 28130 ID=Msa1421970-mRNA-1:cds;Parent=Msa1421970-mRNA-1
tig0025319 CDS 28660 28775 28660 ID=Msa1421970-mRNA-1:cds;Parent=Msa1421970-mRNA-1
tig0025319 CDS 29409 29469 29409 ID=Msa1421970-mRNA-1:cds;Parent=Msa1421970-mRNA-1
tig0025319 CDS 29816 30144 29816 ID=Msa1421970-mRNA-1:cds;Parent=Msa1421970-mRNA-1
tig0025319 CDS 30235 30405 30235 ID=Msa1421970-mRNA-1:cds;Parent=Msa1421970-mRNA-1
tig0025319 CDS 30568 30633 30568 ID=Msa1421970-mRNA-1:cds;Parent=Msa1421970-mRNA-1
tig0025319 CDS 30755 30823 30755 ID=Msa1421970-mRNA-1:cds;Parent=Msa1421970-mRNA-1
tig0025319 CDS 31275 31346 31275 ID=Msa1421970-mRNA-1:cds;Parent=Msa1421970-mRNA-1
tig0025319 three_prime_UTR 31347 31619 31347 ID=Msa1421970-mRNA-1:three_prime_utr;Parent=Msa1421970-mRNA-1
Gene Sequence

>Msa1421970

ATGGATTCTAATACTCATCAACAACAGAACCAATCCAATTCTTCTGGGTTGCTTCGTTTTCGTTCTGCACCTAGTTCACTGTTTCAAAATCTCACACCTTCTTTTCCTTCTTCTGGTGATTCTAATAAAGTTACTAAACATTTTTGGGATGGTTCTGAATCAGAGAGATTTGTGAGTAACGATAATAATAATATTTCTGGTTCATCTTGTTCTAAGGAAATGAATTCTGGTTATGGTGCTGGTTTGCCACCTCATTATCCTAGACATGGTTCTGCTTCTAGTTCTGCTATGGATGGTTCTTTTGGATTGGTTGGTTCATTGGGAATGGATCAAGAAACATCACATGATAAGAATTTTGGTTCAAATCTTCTTAGACAGGGTAGTTCCCCTGCTGGTCTTTTCTCCAACATTTCCTTTCAAAATGTGCGTAGAGGCATGCGCACTGGCCAAGCGTTGTTCCCACTGGGAATCGAACTCGGTATTCCCCGGGAACGTCCTTGGAAGGAGCTCCTTGCCACTGAGCCCAAGCAACTTGGTTTGGACGAACCAATTCGCAAAAGTACTGAGAGTTGGTATGCGAGTACAAGTTCGTGGTTCTCTGGGTTTTCTGCCATGAAAGGCGTTGGAAACTATGCCACGGTAAATGGTAGTAACGGCGAACTTAGTCCGTCTATTAACCGATTGAACACTCAGGTTACCTTCCCTTCAAGAAATGCTTCTTCCTTGGGAATATTGTCACATATCTCTGAAATAGATAGCGAGGATATTGAAGCAACTAGCCCTGATGACGGAGGTAGCAACGGTGATTCTACTCACTATGGCTCTGGATTCCCCTATAGTTCTTGGAACGATACTCAATCATTCACAGAAAATCTCAGTGGTTTGAAAAGAGGGCGAAGCAGTAACGAAAAAATGTTTTCTGATATTCAGCGTGGAGGGCTTGGAAATCAAGTTCATACATTATCGCATCAGTTGAGTTTACCGAACACGTCATCTGAGATGATTGCTATGGAGAAGTTGTTTCAGTTTCCAGATTCTGTTCCTTGTAAAATTCGAGCGAAAAGAGGCTGCGCTACTCATCCTCGAAGCATTGCCGAGAGGGTAAGAAGAACTAAGATCAGTGAAAGAATGAGGAAATTGCAAGAGCTTGTTCCAAACATGGATAAGCAAACTAATACATCAGACATGTTGGACTTGGCTGTTGATTACATTAAAAATCTTCAAAAACAATTCAAGTCCCTAAGTGATAAACGAGCAAACTGCAAATGTATGAGGATGCAGAAGGCAGATACAAATCAAATTACTTGA
Protein sequence

>Msa1421970

MDSNTHQQQNQSNSSGLLRFRSAPSSLFQNLTPSFPSSGDSNKVTKHFWDGSESERFVSNDNNNISGSSCSKEMNSGYGAGLPPHYPRHGSASSSAMDGSFGLVGSLGMDQETSHDKNFGSNLLRQGSSPAGLFSNISFQNVRRGMRTGQALFPLGIELGIPRERPWKELLATEPKQLGLDEPIRKSTESWYASTSSWFSGFSAMKGVGNYATVNGSNGELSPSINRLNTQVTFPSRNASSLGILSHISEIDSEDIEATSPDDGGSNGDSTHYGSGFPYSSWNDTQSFTENLSGLKRGRSSNEKMFSDIQRGGLGNQVHTLSHQLSLPNTSSEMIAMEKLFQFPDSVPCKIRAKRGCATHPRSIAERVRRTKISERMRKLQELVPNMDKQTNTSDMLDLAVDYIKNLQKQFKSLSDKRANCKCMRMQKADTNQIT*