Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1425520 | XP_003604651.1 | 74.379 | 523 | 63 | 6 | 1 | 456 | 1 | 519 | 0.0 | 717 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1425520 | G7JN22 | 74.379 | 523 | 63 | 6 | 1 | 456 | 1 | 519 | 0.0 | 717 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa1420580 | Msa1425520 | 0.970362 | 1.675031e-131 | -8.615850e-47 |
| Msa0220580 | Msa1425520 | 0.803537 | 3.324589e-49 | -8.615850e-47 |
| Msa0333720 | Msa1425520 | -0.801547 | 8.551041e-49 | -8.615850e-47 |
| Msa1116130 | Msa1425520 | -0.804731 | 1.876308e-49 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1425520 | MtrunA17_Chr4g0006171 | 74.379 | 523 | 63 | 6 | 1 | 456 | 1 | 519 | 0.0 | 717 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1425520 | AT5G01260.1 | 34.675 | 323 | 173 | 8 | 2 | 310 | 6 | 304 | 2.25e-46 | 163 |
| Msa1425520 | AT5G01260.2 | 34.568 | 324 | 174 | 8 | 2 | 311 | 6 | 305 | 1.00e-45 | 164 |
| Msa1425520 | AT5G01260.3 | 34.494 | 316 | 169 | 8 | 2 | 303 | 6 | 297 | 1.35e-45 | 161 |
Find 96 sgRNAs with CRISPR-Local
Find 269 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| ATGATCCTAAACTTGGTTTA+TGG | 0.208760 | tig0025867:+16335 | Msa1425520:CDS |
| GAAAAGAAGGTGATATTATT+TGG | 0.215755 | tig0025867:+16864 | Msa1425520:CDS |
| TTGTATTATTCTTTCAGTTT+TGG | 0.258568 | tig0025867:+19533 | Msa1425520:three_prime_UTR |
| TGTTCATAGTTTCCCATGTT+TGG | 0.263305 | tig0025867:-16910 | None:intergenic |
| TTAGATTCTTCTTCCATTGT+TGG | 0.308755 | tig0025867:-19195 | None:intergenic |
| CGCAAGGCATTACCATGAAT+TGG | 0.309591 | tig0025867:-18551 | None:intergenic |
| CGCAAGGCATTACCATGAAT+TGG | 0.309591 | tig0025867:-19225 | None:intergenic |
| CTATACAAGTTGATACTAAA+AGG | 0.314326 | tig0025867:+16842 | Msa1425520:CDS |
| CTACTAAAAGATTGCGACTT+TGG | 0.316881 | tig0025867:+16289 | Msa1425520:CDS |
| TAGGGCTTCACCAGCTTTGT+AGG | 0.320513 | tig0025867:+18917 | Msa1425520:intron |
| CAGCTTTGTAGGGTTGAGTT+AGG | 0.334637 | tig0025867:+18928 | Msa1425520:CDS |
| GGAGAACAGTTTCTAATAGT+TGG | 0.352666 | tig0025867:+16310 | Msa1425520:CDS |
| CAACACAATGATGTTTGGTT+TGG | 0.352722 | tig0025867:-15056 | None:intergenic |
| AATAATTGTTCTTGAGGATT+GGG | 0.356549 | tig0025867:+16934 | Msa1425520:CDS |
| GGGTTCCATAAACCAAGTTT+AGG | 0.360824 | tig0025867:-16340 | None:intergenic |
| GCTATGTTTGCCGAAAATAT+AGG | 0.378453 | tig0025867:+17043 | Msa1425520:CDS |
| AGAACCGGAGGTTCTTCATT+TGG | 0.386077 | tig0025867:-17004 | None:intergenic |
| AACATAGCCATTGGCTTCTC+TGG | 0.387237 | tig0025867:-17028 | None:intergenic |
| GATCCTAGCTTATGAACTAT+AGG | 0.387560 | tig0025867:-15158 | None:intergenic |
| GCATGAAGAACAGTTTCATT+TGG | 0.387821 | tig0025867:+18496 | Msa1425520:CDS |
| CATGGTCTGATGGTCATATA+TGG | 0.388044 | tig0025867:+16383 | Msa1425520:CDS |
| TAAATTACATAGATTGTGTA+TGG | 0.388589 | tig0025867:+19576 | Msa1425520:three_prime_UTR |
| AGGTGATATTATTTGGCAAC+CGG | 0.392152 | tig0025867:+16871 | Msa1425520:CDS |
| ACATGAAGAGCAGTTTCATT+TGG | 0.393105 | tig0025867:+19170 | Msa1425520:CDS |
| GGAAAGAGTGAAACAAGAAA+AGG | 0.394035 | tig0025867:-15219 | None:intergenic |
| GAATAATTGTTCTTGAGGAT+TGG | 0.398780 | tig0025867:+16933 | Msa1425520:CDS |
| AGACACAACACAATGATGTT+TGG | 0.412139 | tig0025867:-15061 | None:intergenic |
| TGCAGTGCCATCTGAACAAC+AGG | 0.413359 | tig0025867:+15316 | Msa1425520:CDS |
| GTCAATGGTAATGCATCTAA+AGG | 0.413839 | tig0025867:-16361 | None:intergenic |
| TATTATGCTGTCTTGTTACA+TGG | 0.423619 | tig0025867:+19509 | Msa1425520:three_prime_UTR |
| TCTAACTCAGAGCCAATTCA+TGG | 0.434464 | tig0025867:+19213 | Msa1425520:CDS |
| GGAGGTCCTGTTCTTGTACC+TGG | 0.437575 | tig0025867:+17223 | Msa1425520:CDS |
| GAAAGAGTGAAACAAGAAAA+GGG | 0.442955 | tig0025867:-15218 | None:intergenic |
| AGCTCTTATCCATCTTTCCC+AGG | 0.460639 | tig0025867:-19409 | None:intergenic |
| GTTGGAGATGATCCTAAACT+TGG | 0.469158 | tig0025867:+16328 | Msa1425520:CDS |
| TTCTGATCCTGAGTTTCAAA+AGG | 0.469360 | tig0025867:-17328 | None:intergenic |
| ATTAAGCCAGGTACAAGAAC+AGG | 0.470486 | tig0025867:-17229 | None:intergenic |
| ATTGGCTTCTCTGGTAGAAC+CGG | 0.470881 | tig0025867:-17019 | None:intergenic |
| TCTTCTTCAACAACTTCACT+TGG | 0.473052 | tig0025867:-17277 | None:intergenic |
| TAAGAGCTCAAAGTGTTTCA+TGG | 0.475434 | tig0025867:+19424 | Msa1425520:CDS |
| CTTAGAACTAAAACTTGTGA+AGG | 0.476857 | tig0025867:-15135 | None:intergenic |
| GAACAGAATAATTGTTCTTG+AGG | 0.486338 | tig0025867:+16928 | Msa1425520:CDS |
| TCAAACTCAGAGCCAATTCA+TGG | 0.486763 | tig0025867:+18539 | Msa1425520:CDS |
| CTTGAAACATGTACAAAACA+AGG | 0.506329 | tig0025867:+15277 | Msa1425520:CDS |
| ATCATGTGTTCAGGATATGC+TGG | 0.508543 | tig0025867:+16805 | Msa1425520:intron |
| GTACTTGTACTTATCTCTTG+TGG | 0.509169 | tig0025867:-19123 | None:intergenic |
| TCAATGGTAATGCATCTAAA+GGG | 0.510357 | tig0025867:-16360 | None:intergenic |
| TGCCGAAAATATAGGTTCCT+CGG | 0.514374 | tig0025867:+17051 | Msa1425520:CDS |
| TTGATACTAAAAGGAAAAGA+AGG | 0.516269 | tig0025867:+16851 | Msa1425520:CDS |
| AGGGCTTCACCAGCTTTGTA+GGG | 0.518853 | tig0025867:+18918 | Msa1425520:intron |
| ACTTTATACTAAAAGATAAG+TGG | 0.522726 | tig0025867:-19601 | None:intergenic |
| TTGGCATCAACAATGGAAGA+AGG | 0.534614 | tig0025867:+18515 | Msa1425520:CDS |
| TCAACCAAATGAAGAACCTC+CGG | 0.536881 | tig0025867:+17000 | Msa1425520:CDS |
| TATTATTTGGCAACCGGGGT+CGG | 0.540226 | tig0025867:+16877 | Msa1425520:CDS |
| TCAGTCAACGGTATTAAGCC+AGG | 0.540479 | tig0025867:-17241 | None:intergenic |
| AAATAAACCTGTTGTTCAGA+TGG | 0.543697 | tig0025867:-15323 | None:intergenic |
| TGTTCGCTTTGTTGAACTTG+AGG | 0.544102 | tig0025867:-16137 | None:intergenic |
| CGGATCGAGTAATCCAAACA+TGG | 0.544820 | tig0025867:+16897 | Msa1425520:CDS |
| CAGATGGCACTGCATGCAAA+GGG | 0.546614 | tig0025867:-15307 | None:intergenic |
| AGAACTTCAGAAAATAATAG+AGG | 0.549395 | tig0025867:+16964 | Msa1425520:CDS |
| AAGCCTATAGTTCATAAGCT+AGG | 0.553146 | tig0025867:+15155 | Msa1425520:CDS |
| CAACAAAATCTAAACGTACA+AGG | 0.553450 | tig0025867:+15031 | Msa1425520:five_prime_UTR |
| GTTTCAAAAGGTTCAACTGA+TGG | 0.554167 | tig0025867:-17316 | None:intergenic |
| AAGAGTGAAGAATCTGAAGA+TGG | 0.555921 | tig0025867:+17127 | Msa1425520:CDS |
| TGGATTACTCGATCCGACCC+CGG | 0.556713 | tig0025867:-16890 | None:intergenic |
| TGACCATCAGACCATGTCAA+TGG | 0.564403 | tig0025867:-16376 | None:intergenic |
| GTTTCATTTGGCATCAACAA+TGG | 0.568666 | tig0025867:+18508 | Msa1425520:CDS |
| TCAGATGGCACTGCATGCAA+AGG | 0.568931 | tig0025867:-15308 | None:intergenic |
| GGCTTCTCTGGTAGAACCGG+AGG | 0.575456 | tig0025867:-17016 | None:intergenic |
| TCATATATGGACTGTTGAGC+TGG | 0.575955 | tig0025867:+16396 | Msa1425520:CDS |
| CTAACTCAACCCTACAAAGC+TGG | 0.577105 | tig0025867:-18927 | None:intergenic |
| GTTTCATTTGGCACCAACAA+TGG | 0.578517 | tig0025867:+19182 | Msa1425520:CDS |
| AATGAAGAACTTTCTCCTAG+TGG | 0.580536 | tig0025867:-19330 | None:intergenic |
| CCAGCTTCTTCTTCAGTCAA+CGG | 0.590556 | tig0025867:-17253 | None:intergenic |
| TGTGTTCAGGATATGCTGGC+TGG | 0.594337 | tig0025867:+16809 | Msa1425520:intron |
| AGCATGAATTCAACAAACAA+TGG | 0.595879 | tig0025867:-19457 | None:intergenic |
| TGGCATCAACAATGGAAGAA+GGG | 0.602203 | tig0025867:+18516 | Msa1425520:CDS |
| TGAAAATGTTCAGTTGAGCA+AGG | 0.604858 | tig0025867:+19077 | Msa1425520:intron |
| TAGATGCATTACCATTGACA+TGG | 0.613812 | tig0025867:+16365 | Msa1425520:CDS |
| GGTGATATTATTTGGCAACC+GGG | 0.626598 | tig0025867:+16872 | Msa1425520:CDS |
| TGAAAATGCTCAGTTAAGCA+AGG | 0.630052 | tig0025867:+18409 | Msa1425520:intron |
| ACTTCAGAAAATAATAGAGG+AGG | 0.634094 | tig0025867:+16967 | Msa1425520:CDS |
| TTACCATTGACATGGTCTGA+TGG | 0.637869 | tig0025867:+16373 | Msa1425520:CDS |
| GAAACATGAAAAGCAACACT+AGG | 0.641404 | tig0025867:-15188 | None:intergenic |
| TTGAAACATGTACAAAACAA+GGG | 0.648807 | tig0025867:+15278 | Msa1425520:CDS |
| AAGTGTTTCATGGTGATGCA+TGG | 0.648971 | tig0025867:+19434 | Msa1425520:exon |
| GGTTCTACCAGAGAAGCCAA+TGG | 0.652910 | tig0025867:+17021 | Msa1425520:CDS |
| CCGTTGACTGAAGAAGAAGC+TGG | 0.654789 | tig0025867:+17253 | Msa1425520:CDS |
| GTGATATTATTTGGCAACCG+GGG | 0.662994 | tig0025867:+16873 | Msa1425520:CDS |
| TTCAACTGATGGCTCTACCA+CGG | 0.664103 | tig0025867:-17305 | None:intergenic |
| GGATCGAGTAATCCAAACAT+GGG | 0.665164 | tig0025867:+16898 | Msa1425520:CDS |
| ACTTTCTGTGAGATCCTCCG+AGG | 0.674643 | tig0025867:-17068 | None:intergenic |
| CGAAAATATAGGTTCCTCGG+AGG | 0.707768 | tig0025867:+17054 | Msa1425520:CDS |
| TCAGGATCAGAATATACCAG+AGG | 0.719056 | tig0025867:+17339 | Msa1425520:CDS |
| TGTTGAAGAAGAAAAGACCG+TGG | 0.738151 | tig0025867:+17288 | Msa1425520:CDS |
| TTAGTAGCTGAAACTCAACA+CGG | 0.751100 | tig0025867:-16273 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | TTTATTTGAATTTGATAAAT+GGG | + | tig0025867:15378-15397 | Msa1425520:intron | 10.0% |
| !!! | CTTTATTTGAATTTGATAAA+TGG | + | tig0025867:15377-15396 | Msa1425520:intron | 15.0% |
| !!! | GATTTTAATGTTATACTTTT+TGG | + | tig0025867:15553-15572 | Msa1425520:intron | 15.0% |
| !! | AAAACAAAAGTTTCTTAAAA+GGG | - | tig0025867:15649-15668 | None:intergenic | 15.0% |
| !! | AAAAACAAAAGTTTCTTAAA+AGG | - | tig0025867:15650-15669 | None:intergenic | 15.0% |
| !!! | TGTTTTTGATTTTTTGTTTT+TGG | + | tig0025867:15663-15682 | Msa1425520:intron | 15.0% |
| !! | ACATATGAGTAAAAATTAAT+TGG | + | tig0025867:15800-15819 | Msa1425520:intron | 15.0% |
| !! | TGATTGTTATATATACATTA+AGG | + | tig0025867:15868-15887 | Msa1425520:intron | 15.0% |
| !! | GATTGTTATATATACATTAA+GGG | + | tig0025867:15869-15888 | Msa1425520:intron | 15.0% |
| !!! | ACACACAAATTAAAATTTTA+GGG | - | tig0025867:16230-16249 | None:intergenic | 15.0% |
| !!! | AACACACAAATTAAAATTTT+AGG | - | tig0025867:16231-16250 | None:intergenic | 15.0% |
| !! | TTTGGAAACAAAATAAAAAA+AGG | - | tig0025867:16523-16542 | None:intergenic | 15.0% |
| !! | TCTTAATTTCAAAGATTTAA+CGG | - | tig0025867:16668-16687 | None:intergenic | 15.0% |
| !! | ATTAATGATAACAATCAATT+TGG | - | tig0025867:17619-17638 | None:intergenic | 15.0% |
| !! | ATAAAATGAGAAAATTTGTA+TGG | - | tig0025867:18153-18172 | None:intergenic | 15.0% |
| !!! | TTGCACATTTTTTTAATATA+TGG | + | tig0025867:18320-18339 | Msa1425520:intron | 15.0% |
| !!! | TCATTGCTTTAAATAATTAA+TGG | - | tig0025867:18968-18987 | None:intergenic | 15.0% |
| !! | TCAAATAAAGAACACAAATT+GGG | - | tig0025867:15367-15386 | None:intergenic | 20.0% |
| !! | TTCAAATAAAGAACACAAAT+TGG | - | tig0025867:15368-15387 | None:intergenic | 20.0% |
| !! | GTTGTAGTTATTTATTTGTT+TGG | + | tig0025867:15400-15419 | Msa1425520:intron | 20.0% |
| !! | ATAACTTCAAATAGGAAAAA+GGG | - | tig0025867:15701-15720 | None:intergenic | 20.0% |
| !! | AATAACTTCAAATAGGAAAA+AGG | - | tig0025867:15702-15721 | None:intergenic | 20.0% |
| !! | AAAAGAGAATAACTTCAAAT+AGG | - | tig0025867:15709-15728 | None:intergenic | 20.0% |
| !! | CAAATCATTAAGATATTGTT+TGG | + | tig0025867:16434-16453 | Msa1425520:intron | 20.0% |
| !! | CAGCGTTAAAAAATAAAAAA+GGG | + | tig0025867:17167-17186 | Msa1425520:CDS | 20.0% |
| !!! | AAATAAATTGTGTGTTGTTA+TGG | - | tig0025867:17755-17774 | None:intergenic | 20.0% |
| !!! | ATATAATTTTAGTGCTTGTT+TGG | - | tig0025867:18115-18134 | None:intergenic | 20.0% |
| !! | AAGAGTTCTTGTAAATAAAA+CGG | - | tig0025867:18837-18856 | None:intergenic | 20.0% |
| !! | AAGAAGTTTCTAACAAAATT+TGG | + | tig0025867:19279-19298 | Msa1425520:intron | 20.0% |
| !!! | CTTTTTGCCTAAATTTTTAT+TGG | + | tig0025867:19386-19405 | Msa1425520:CDS | 20.0% |
| !!! | TTGTATTATTCTTTCAGTTT+TGG | + | tig0025867:19533-19552 | Msa1425520:three_prime_UTR | 20.0% |
| !! | TAAATTACATAGATTGTGTA+TGG | + | tig0025867:19576-19595 | Msa1425520:three_prime_UTR | 20.0% |
| !! | ACTTTATACTAAAAGATAAG+TGG | - | tig0025867:19604-19623 | None:intergenic | 20.0% |
| !!! | ACTTTTTTGTTCATTTCTGA+AGG | - | tig0025867:15243-15262 | None:intergenic | 25.0% |
| ! | ATGTTTCAAGAGACAAAAAA+TGG | - | tig0025867:15267-15286 | None:intergenic | 25.0% |
| ! | TTGAAACATGTACAAAACAA+GGG | + | tig0025867:15278-15297 | Msa1425520:CDS | 25.0% |
| ! | CAAATAAAGAACACAAATTG+GGG | - | tig0025867:15366-15385 | None:intergenic | 25.0% |
| ! | CATCATAGATTAAAACCAAA+AGG | - | tig0025867:15468-15487 | None:intergenic | 25.0% |
| ! | TAACTTCAAATAGGAAAAAG+GGG | - | tig0025867:15700-15719 | None:intergenic | 25.0% |
| ! | GTATTTATGTAGAATTCAAG+AGG | + | tig0025867:15777-15796 | Msa1425520:intron | 25.0% |
| ! | ATATACATTAAGGGTCTATT+TGG | + | tig0025867:15878-15897 | Msa1425520:intron | 25.0% |
| ! | AAGATGTTTAAGTGAACTAA+TGG | + | tig0025867:15941-15960 | Msa1425520:intron | 25.0% |
| !! | TTGTTCTGCATAAATTTTAC+AGG | + | tig0025867:16091-16110 | Msa1425520:intron | 25.0% |
| ! | AACAAACAAGTATGTTCTAA+TGG | + | tig0025867:16156-16175 | Msa1425520:intron | 25.0% |
| !! | TTTGGTCGAAAACATTTTTA+AGG | + | tig0025867:16452-16471 | Msa1425520:intron | 25.0% |
| ! | TATAAACAACCACTACATAA+CGG | - | tig0025867:16779-16798 | None:intergenic | 25.0% |
| !! | ATATTTTTCATCATGTGTTC+AGG | + | tig0025867:16796-16815 | Msa1425520:intron | 25.0% |
| !! | CTTTTAGTATCAACTTGTAT+AGG | - | tig0025867:16844-16863 | None:intergenic | 25.0% |
| !!! | CTATACAAGTTGATACTAAA+AGG | + | tig0025867:16842-16861 | Msa1425520:CDS | 25.0% |
| ! | TTGATACTAAAAGGAAAAGA+AGG | + | tig0025867:16851-16870 | Msa1425520:CDS | 25.0% |
| ! | GAAAAGAAGGTGATATTATT+TGG | + | tig0025867:16864-16883 | Msa1425520:CDS | 25.0% |
| ! | AATAATTGTTCTTGAGGATT+GGG | + | tig0025867:16934-16953 | Msa1425520:CDS | 25.0% |
| ! | AGAACTTCAGAAAATAATAG+AGG | + | tig0025867:16964-16983 | Msa1425520:CDS | 25.0% |
| !!! | TTTTTATTTTTTAACGCTGC+AGG | - | tig0025867:17166-17185 | None:intergenic | 25.0% |
| ! | GCAGCGTTAAAAAATAAAAA+AGG | + | tig0025867:17166-17185 | Msa1425520:CDS | 25.0% |
| ! | ATGATGATACAAACAAAACA+AGG | - | tig0025867:17481-17500 | None:intergenic | 25.0% |
| ! | GATTATATATGTACGAAACA+AGG | - | tig0025867:17557-17576 | None:intergenic | 25.0% |
| ! | TATATAATCAATGCATCTTG+AGG | + | tig0025867:17568-17587 | Msa1425520:intron | 25.0% |
| !!! | TATTTTAATCTGAAACAAGC+TGG | + | tig0025867:17770-17789 | Msa1425520:intron | 25.0% |
| !!! | GGTTTTAATAAAAAGGTTTG+CGG | - | tig0025867:17930-17949 | None:intergenic | 25.0% |
| !!! | GTTTGTTAAGTTTTTGTAAC+AGG | - | tig0025867:17960-17979 | None:intergenic | 25.0% |
| !!! | ACATTGGTTTAAATGATTAC+TGG | - | tig0025867:18294-18313 | None:intergenic | 25.0% |
| ! | AAAAAAGATGTCCAAAATCT+GGG | - | tig0025867:18722-18741 | None:intergenic | 25.0% |
| ! | AAAAAAAGATGTCCAAAATC+TGG | - | tig0025867:18723-18742 | None:intergenic | 25.0% |
| ! | AGAGTTCTTGTAAATAAAAC+GGG | - | tig0025867:18836-18855 | None:intergenic | 25.0% |
| ! | ATCAGATATATTCTAGTCAA+TGG | - | tig0025867:18862-18881 | None:intergenic | 25.0% |
| CAACAAAATCTAAACGTACA+AGG | + | tig0025867:15031-15050 | Msa1425520:five_prime_UTR | 30.0% | |
| CTTAGAACTAAAACTTGTGA+AGG | - | tig0025867:15138-15157 | None:intergenic | 30.0% | |
| GAAAGAGTGAAACAAGAAAA+GGG | - | tig0025867:15221-15240 | None:intergenic | 30.0% | |
| CTTGAAACATGTACAAAACA+AGG | + | tig0025867:15277-15296 | Msa1425520:CDS | 30.0% | |
| AAATAAACCTGTTGTTCAGA+TGG | - | tig0025867:15326-15345 | None:intergenic | 30.0% | |
| !! | TTTGTTCTTTGTTGTTGAAG+TGG | - | tig0025867:15614-15633 | None:intergenic | 30.0% |
| !!! | ATTGGTTTTTCTGTGTTTAG+TGG | + | tig0025867:15818-15837 | Msa1425520:intron | 30.0% |
| ! | ACGCAAAAATAGCTTGATTT+TGG | + | tig0025867:16049-16068 | Msa1425520:intron | 30.0% |
| ! | TTCTGCATAAATTTTACAGG+AGG | + | tig0025867:16094-16113 | Msa1425520:intron | 30.0% |
| ATGATCCTAAACTTGGTTTA+TGG | + | tig0025867:16335-16354 | Msa1425520:CDS | 30.0% | |
| ! | TCAATGGTAATGCATCTAAA+GGG | - | tig0025867:16363-16382 | None:intergenic | 30.0% |
| GAACAGAATAATTGTTCTTG+AGG | + | tig0025867:16928-16947 | Msa1425520:CDS | 30.0% | |
| GAATAATTGTTCTTGAGGAT+TGG | + | tig0025867:16933-16952 | Msa1425520:CDS | 30.0% | |
| ACTTCAGAAAATAATAGAGG+AGG | + | tig0025867:16967-16986 | Msa1425520:CDS | 30.0% | |
| AAATAAAAAAGGGACGATTG+TGG | + | tig0025867:17177-17196 | Msa1425520:CDS | 30.0% | |
| TCAAACAATTTGAAAAGGAG+CGG | - | tig0025867:17384-17403 | None:intergenic | 30.0% | |
| CGGAATCAAACAATTTGAAA+AGG | - | tig0025867:17389-17408 | None:intergenic | 30.0% | |
| !! | CGAATGAGCTTTTAAAGAAA+CGG | - | tig0025867:17409-17428 | None:intergenic | 30.0% |
| ! | CGTTTCTTTAAAAGCTCATT+CGG | + | tig0025867:17407-17426 | Msa1425520:intron | 30.0% |
| ! | GTTTCTTTAAAAGCTCATTC+GGG | + | tig0025867:17408-17427 | Msa1425520:intron | 30.0% |
| ! | CTAATTAGTTCTTCTCTAAG+TGG | - | tig0025867:17442-17461 | None:intergenic | 30.0% |
| CACTTAGAGAAGAACTAATT+AGG | + | tig0025867:17440-17459 | Msa1425520:intron | 30.0% | |
| !! | TCTGCAGGGTTTTAATAAAA+AGG | - | tig0025867:17937-17956 | None:intergenic | 30.0% |
| !! | ATTTTAGTGCTTGTTTGGAT+TGG | - | tig0025867:18110-18129 | None:intergenic | 30.0% |
| CTTCTGATGAAAAAACAACA+GGG | + | tig0025867:18230-18249 | Msa1425520:intron | 30.0% | |
| AAATGTGCAAGTTTACACAT+TGG | - | tig0025867:18310-18329 | None:intergenic | 30.0% | |
| !!! | GATTGTTTTGATGTCAAATG+TGG | + | tig0025867:18627-18646 | Msa1425520:intron | 30.0% |
| GAGTTCTTGTAAATAAAACG+GGG | - | tig0025867:18835-18854 | None:intergenic | 30.0% | |
| TTAGATTCTTCTTCCATTGT+TGG | - | tig0025867:19198-19217 | None:intergenic | 30.0% | |
| AGCATGAATTCAACAAACAA+TGG | - | tig0025867:19460-19479 | None:intergenic | 30.0% | |
| ! | TATTATGCTGTCTTGTTACA+TGG | + | tig0025867:19509-19528 | Msa1425520:three_prime_UTR | 30.0% |
| CAACACAATGATGTTTGGTT+TGG | - | tig0025867:15059-15078 | None:intergenic | 35.0% | |
| AGACACAACACAATGATGTT+TGG | - | tig0025867:15064-15083 | None:intergenic | 35.0% | |
| AAGCCTATAGTTCATAAGCT+AGG | + | tig0025867:15155-15174 | Msa1425520:CDS | 35.0% | |
| GATCCTAGCTTATGAACTAT+AGG | - | tig0025867:15161-15180 | None:intergenic | 35.0% | |
| GAAACATGAAAAGCAACACT+AGG | - | tig0025867:15191-15210 | None:intergenic | 35.0% | |
| GGAAAGAGTGAAACAAGAAA+AGG | - | tig0025867:15222-15241 | None:intergenic | 35.0% | |
| !! | TTCCATGAGTTTGTTCCTTT+TGG | + | tig0025867:15450-15469 | Msa1425520:intron | 35.0% |
| AACCAAAAGGAACAAACTCA+TGG | - | tig0025867:15455-15474 | None:intergenic | 35.0% | |
| ! | TTTTCCATCCATGTCAATGA+TGG | + | tig0025867:15725-15744 | Msa1425520:intron | 35.0% |
| GTTATACTCCATCATTGACA+TGG | - | tig0025867:15736-15755 | None:intergenic | 35.0% | |
| GAGTGAAAGTTGTTAAGAAG+TGG | + | tig0025867:15840-15859 | Msa1425520:intron | 35.0% | |
| TTTAGGGATTTGAGTCCTAA+AGG | - | tig0025867:16214-16233 | None:intergenic | 35.0% | |
| TTAGTAGCTGAAACTCAACA+CGG | - | tig0025867:16276-16295 | None:intergenic | 35.0% | |
| CTACTAAAAGATTGCGACTT+TGG | + | tig0025867:16289-16308 | Msa1425520:CDS | 35.0% | |
| GGAGAACAGTTTCTAATAGT+TGG | + | tig0025867:16310-16329 | Msa1425520:CDS | 35.0% | |
| ! | GTCAATGGTAATGCATCTAA+AGG | - | tig0025867:16364-16383 | None:intergenic | 35.0% |
| TAGATGCATTACCATTGACA+TGG | + | tig0025867:16365-16384 | Msa1425520:CDS | 35.0% | |
| AAAGGTGAAAACAACGTAAC+TGG | - | tig0025867:16505-16524 | None:intergenic | 35.0% | |
| ! | CTTAAAACTCTGGTTTCCAT+CGG | - | tig0025867:16624-16643 | None:intergenic | 35.0% |
| !!! | CTCTTTTGGTCTTAAAACTC+TGG | - | tig0025867:16634-16653 | None:intergenic | 35.0% |
| AGGTGATATTATTTGGCAAC+CGG | + | tig0025867:16871-16890 | Msa1425520:CDS | 35.0% | |
| TGTTCATAGTTTCCCATGTT+TGG | - | tig0025867:16913-16932 | None:intergenic | 35.0% | |
| GCTATGTTTGCCGAAAATAT+AGG | + | tig0025867:17043-17062 | Msa1425520:CDS | 35.0% | |
| AAGAGTGAAGAATCTGAAGA+TGG | + | tig0025867:17127-17146 | Msa1425520:CDS | 35.0% | |
| !! | GGAAGCTTAATCGATTTTGA+AGG | + | tig0025867:17202-17221 | Msa1425520:CDS | 35.0% |
| !! | AGCTTAATCGATTTTGAAGG+AGG | + | tig0025867:17205-17224 | Msa1425520:CDS | 35.0% |
| TCTTCTTCAACAACTTCACT+TGG | - | tig0025867:17280-17299 | None:intergenic | 35.0% | |
| GTTTCAAAAGGTTCAACTGA+TGG | - | tig0025867:17319-17338 | None:intergenic | 35.0% | |
| !!! | AGTTGAACCTTTTGAAACTC+AGG | + | tig0025867:17321-17340 | Msa1425520:CDS | 35.0% |
| TTCTGATCCTGAGTTTCAAA+AGG | - | tig0025867:17331-17350 | None:intergenic | 35.0% | |
| ! | GAGATGTTACCATGAACTTT+TGG | + | tig0025867:17712-17731 | Msa1425520:intron | 35.0% |
| ATTCAACAGCCAAAAGTTCA+TGG | - | tig0025867:17724-17743 | None:intergenic | 35.0% | |
| AGACACTTAGTAATGCTAGA+TGG | - | tig0025867:17986-18005 | None:intergenic | 35.0% | |
| AGCATTACTAAGTGTCTGTT+TGG | + | tig0025867:17989-18008 | Msa1425520:intron | 35.0% | |
| GCTTCTGATGAAAAAACAAC+AGG | + | tig0025867:18229-18248 | Msa1425520:intron | 35.0% | |
| ! | TTCACTTGTAGGCTTTAGTT+AGG | + | tig0025867:18254-18273 | Msa1425520:intron | 35.0% |
| TGAAAATGCTCAGTTAAGCA+AGG | + | tig0025867:18409-18428 | Msa1425520:intron | 35.0% | |
| GCATGAAGAACAGTTTCATT+TGG | + | tig0025867:18496-18515 | Msa1425520:CDS | 35.0% | |
| GTTTCATTTGGCATCAACAA+TGG | + | tig0025867:18508-18527 | Msa1425520:CDS | 35.0% | |
| !! | AAAGTCGATGCTAGTCTTAA+TGG | + | tig0025867:19022-19041 | Msa1425520:intron | 35.0% |
| TGAAAATGTTCAGTTGAGCA+AGG | + | tig0025867:19077-19096 | Msa1425520:intron | 35.0% | |
| GTACTTGTACTTATCTCTTG+TGG | - | tig0025867:19126-19145 | None:intergenic | 35.0% | |
| ACATGAAGAGCAGTTTCATT+TGG | + | tig0025867:19170-19189 | Msa1425520:CDS | 35.0% | |
| AATGAAGAACTTTCTCCTAG+TGG | - | tig0025867:19333-19352 | None:intergenic | 35.0% | |
| ! | TGCCTAAATTTTTATTGGCC+TGG | + | tig0025867:19391-19410 | Msa1425520:CDS | 35.0% |
| !! | GCCTAAATTTTTATTGGCCT+GGG | + | tig0025867:19392-19411 | Msa1425520:CDS | 35.0% |
| TCCCAGGCCAATAAAAATTT+AGG | - | tig0025867:19396-19415 | None:intergenic | 35.0% | |
| ! | TAAGAGCTCAAAGTGTTTCA+TGG | + | tig0025867:19424-19443 | Msa1425520:CDS | 35.0% |
| TACTCCATCATTGACATGGA+TGG | - | tig0025867:15732-15751 | None:intergenic | 40.0% | |
| ! | TGTTCGCTTTGTTGAACTTG+AGG | - | tig0025867:16140-16159 | None:intergenic | 40.0% |
| TCTTCTGCATGTCTTCCTTT+AGG | + | tig0025867:16196-16215 | Msa1425520:intron | 40.0% | |
| GTTGGAGATGATCCTAAACT+TGG | + | tig0025867:16328-16347 | Msa1425520:CDS | 40.0% | |
| GGGTTCCATAAACCAAGTTT+AGG | - | tig0025867:16343-16362 | None:intergenic | 40.0% | |
| TTACCATTGACATGGTCTGA+TGG | + | tig0025867:16373-16392 | Msa1425520:CDS | 40.0% | |
| CATGGTCTGATGGTCATATA+TGG | + | tig0025867:16383-16402 | Msa1425520:CDS | 40.0% | |
| ! | TCATATATGGACTGTTGAGC+TGG | + | tig0025867:16396-16415 | Msa1425520:CDS | 40.0% |
| TCCAAAATGTTCTCGAAACC+TGG | + | tig0025867:16537-16556 | Msa1425520:intron | 40.0% | |
| ! | CGGTGAAAACAACACTCTTT+TGG | - | tig0025867:16648-16667 | None:intergenic | 40.0% |
| ATCATGTGTTCAGGATATGC+TGG | + | tig0025867:16805-16824 | Msa1425520:intron | 40.0% | |
| GGTGATATTATTTGGCAACC+GGG | + | tig0025867:16872-16891 | Msa1425520:CDS | 40.0% | |
| GTGATATTATTTGGCAACCG+GGG | + | tig0025867:16873-16892 | Msa1425520:CDS | 40.0% | |
| GGATCGAGTAATCCAAACAT+GGG | + | tig0025867:16898-16917 | Msa1425520:CDS | 40.0% | |
| TCAACCAAATGAAGAACCTC+CGG | + | tig0025867:17000-17019 | Msa1425520:CDS | 40.0% | |
| ! | TTTTCGGCAAACATAGCCAT+TGG | - | tig0025867:17040-17059 | None:intergenic | 40.0% |
| TGCCGAAAATATAGGTTCCT+CGG | + | tig0025867:17051-17070 | Msa1425520:CDS | 40.0% | |
| ! | CTCCGAGGAACCTATATTTT+CGG | - | tig0025867:17056-17075 | None:intergenic | 40.0% |
| TAAAAAAGGGACGATTGTGG+AGG | + | tig0025867:17180-17199 | Msa1425520:CDS | 40.0% | |
| AAAAAAGGGACGATTGTGGA+GGG | + | tig0025867:17181-17200 | Msa1425520:CDS | 40.0% | |
| ATTAAGCCAGGTACAAGAAC+AGG | - | tig0025867:17232-17251 | None:intergenic | 40.0% | |
| TGTTGAAGAAGAAAAGACCG+TGG | + | tig0025867:17288-17307 | Msa1425520:CDS | 40.0% | |
| TCAGGATCAGAATATACCAG+AGG | + | tig0025867:17339-17358 | Msa1425520:CDS | 40.0% | |
| CATCTTGAGGCCAAAAGAAA+GGG | + | tig0025867:17581-17600 | Msa1425520:intron | 40.0% | |
| ATCTTGAGGCCAAAAGAAAG+GGG | + | tig0025867:17582-17601 | Msa1425520:intron | 40.0% | |
| ! | GCAATGTTTCCCCTTTCTTT+TGG | - | tig0025867:17594-17613 | None:intergenic | 40.0% |
| AGTCACGATCCTTGATATTG+CGG | + | tig0025867:17815-17834 | Msa1425520:intron | 40.0% | |
| ! | TGCGATTTTCCGCAATATCA+AGG | - | tig0025867:17827-17846 | None:intergenic | 40.0% |
| ! | GTTTTTGTAACAGGTCTGCA+GGG | - | tig0025867:17951-17970 | None:intergenic | 40.0% |
| ! | AGTTTTTGTAACAGGTCTGC+AGG | - | tig0025867:17952-17971 | None:intergenic | 40.0% |
| CGGTGAATTTGACACAATCA+TGG | - | tig0025867:18087-18106 | None:intergenic | 40.0% | |
| ! | TTAGTGCTTGTTTGGATTGG+CGG | - | tig0025867:18107-18126 | None:intergenic | 40.0% |
| TTGGCATCAACAATGGAAGA+AGG | + | tig0025867:18515-18534 | Msa1425520:CDS | 40.0% | |
| TGGCATCAACAATGGAAGAA+GGG | + | tig0025867:18516-18535 | Msa1425520:CDS | 40.0% | |
| TCAAACTCAGAGCCAATTCA+TGG | + | tig0025867:18539-18558 | Msa1425520:CDS | 40.0% | |
| GATGTATGCAACCTCAATTG+TGG | + | tig0025867:18652-18671 | Msa1425520:intron | 40.0% | |
| GAGTCTTTGCAACAAGTCTA+GGG | - | tig0025867:18750-18769 | None:intergenic | 40.0% | |
| TGAGTCTTTGCAACAAGTCT+AGG | - | tig0025867:18751-18770 | None:intergenic | 40.0% | |
| ACTTCCTGTGATATACCGTT+AGG | + | tig0025867:18898-18917 | Msa1425520:intron | 40.0% | |
| CTTCCTGTGATATACCGTTA+GGG | + | tig0025867:18899-18918 | Msa1425520:intron | 40.0% | |
| GTTTCATTTGGCACCAACAA+TGG | + | tig0025867:19182-19201 | Msa1425520:CDS | 40.0% | |
| TCTAACTCAGAGCCAATTCA+TGG | + | tig0025867:19213-19232 | Msa1425520:CDS | 40.0% | |
| CTTGCGAAATGACATCGAAT+GGG | + | tig0025867:19242-19261 | Msa1425520:intron | 40.0% | |
| TTGCGAAATGACATCGAATG+GGG | + | tig0025867:19243-19262 | Msa1425520:intron | 40.0% | |
| GAAACTTCTTTACCGTTTCG+CGG | - | tig0025867:19269-19288 | None:intergenic | 40.0% | |
| ! | CTCCTTTTTACAGAACCACT+AGG | + | tig0025867:19315-19334 | Msa1425520:intron | 40.0% |
| ! | CTCCTAGTGGTTCTGTAAAA+AGG | - | tig0025867:19320-19339 | None:intergenic | 40.0% |
| !! | TTTTATTGGCCTGGGAAAGA+TGG | + | tig0025867:19400-19419 | Msa1425520:CDS | 40.0% |
| ! | AAGTGTTTCATGGTGATGCA+TGG | + | tig0025867:19434-19453 | Msa1425520:exon | 40.0% |
| TGACCATCAGACCATGTCAA+TGG | - | tig0025867:16379-16398 | None:intergenic | 45.0% | |
| ! | GCCAGGTTTCGAGAACATTT+TGG | - | tig0025867:16541-16560 | None:intergenic | 45.0% |
| AAATGTTCTCGAAACCTGGC+TGG | + | tig0025867:16541-16560 | Msa1425520:intron | 45.0% | |
| ! | ACTCTGGTTTCCATCGGAAA+GGG | - | tig0025867:16618-16637 | None:intergenic | 45.0% |
| ! | AACTCTGGTTTCCATCGGAA+AGG | - | tig0025867:16619-16638 | None:intergenic | 45.0% |
| GAAAGCAGACCGTTATGTAG+TGG | + | tig0025867:16767-16786 | Msa1425520:intron | 45.0% | |
| TATTATTTGGCAACCGGGGT+CGG | + | tig0025867:16877-16896 | Msa1425520:CDS | 45.0% | |
| CGGATCGAGTAATCCAAACA+TGG | + | tig0025867:16897-16916 | Msa1425520:CDS | 45.0% | |
| AGAACCGGAGGTTCTTCATT+TGG | - | tig0025867:17007-17026 | None:intergenic | 45.0% | |
| ! | ATTGGCTTCTCTGGTAGAAC+CGG | - | tig0025867:17022-17041 | None:intergenic | 45.0% |
| !! | AACATAGCCATTGGCTTCTC+TGG | - | tig0025867:17031-17050 | None:intergenic | 45.0% |
| CGAAAATATAGGTTCCTCGG+AGG | + | tig0025867:17054-17073 | Msa1425520:CDS | 45.0% | |
| TCAGTCAACGGTATTAAGCC+AGG | - | tig0025867:17244-17263 | None:intergenic | 45.0% | |
| CCAGCTTCTTCTTCAGTCAA+CGG | - | tig0025867:17256-17275 | None:intergenic | 45.0% | |
| ! | TTCAACTGATGGCTCTACCA+CGG | - | tig0025867:17308-17327 | None:intergenic | 45.0% |
| ! | AACAAGGTGATGATGAGCGT+TGG | - | tig0025867:17541-17560 | None:intergenic | 45.0% |
| GCATCTTGAGGCCAAAAGAA+AGG | + | tig0025867:17580-17599 | Msa1425520:intron | 45.0% | |
| ! | GCTGGCAATGTTCTAAGTCA+TGG | + | tig0025867:17788-17807 | Msa1425520:intron | 45.0% |
| AGTCTTTGCAACCACAACTG+AGG | - | tig0025867:17874-17893 | None:intergenic | 45.0% | |
| TGATGTTGCAACCCAGATCA+CGG | + | tig0025867:17904-17923 | Msa1425520:intron | 45.0% | |
| ! | TGTCTGTTTGGAACCAATCG+CGG | + | tig0025867:18001-18020 | Msa1425520:intron | 45.0% |
| ! | ATGGCGACTCATGGTGATTT+TGG | - | tig0025867:18068-18087 | None:intergenic | 45.0% |
| AACAACAGGGCTTCACTTGT+AGG | + | tig0025867:18243-18262 | Msa1425520:intron | 45.0% | |
| ! | CGCAAGGCATTACCATGAAT+TGG | - | tig0025867:18554-18573 | None:intergenic | 45.0% |
| CTTGCGAAATGACATCCAGT+GGG | + | tig0025867:18568-18587 | Msa1425520:intron | 45.0% | |
| TTGCGAAATGACATCCAGTG+GGG | + | tig0025867:18569-18588 | Msa1425520:intron | 45.0% | |
| ! | CTCAATTGTGGTTTGCGTTG+CGG | + | tig0025867:18664-18683 | Msa1425520:intron | 45.0% |
| AATCTGGGCAGCAACATCAA+TGG | - | tig0025867:18707-18726 | None:intergenic | 45.0% | |
| ! | TGATGTTGCTGCCCAGATTT+TGG | + | tig0025867:18708-18727 | Msa1425520:intron | 45.0% |
| AAGCCCTAACGGTATATCAC+AGG | - | tig0025867:18905-18924 | None:intergenic | 45.0% | |
| CTAACTCAACCCTACAAAGC+TGG | - | tig0025867:18930-18949 | None:intergenic | 45.0% | |
| ! | CAGCTTTGTAGGGTTGAGTT+AGG | + | tig0025867:18928-18947 | Msa1425520:CDS | 45.0% |
| ! | CGCAAGGCATTACCATGAAT+TGG | - | tig0025867:18554-18573 | None:intergenic | 45.0% |
| ! | CCATTCGATGTCATTTCGCA+AGG | - | tig0025867:19244-19263 | None:intergenic | 45.0% |
| CCTTGCGAAATGACATCGAA+TGG | + | tig0025867:19241-19260 | Msa1425520:intron | 45.0% | |
| AGCTCTTATCCATCTTTCCC+AGG | - | tig0025867:19412-19431 | None:intergenic | 45.0% | |
| CAGATGGCACTGCATGCAAA+GGG | - | tig0025867:15310-15329 | None:intergenic | 50.0% | |
| TCAGATGGCACTGCATGCAA+AGG | - | tig0025867:15311-15330 | None:intergenic | 50.0% | |
| TGCAGTGCCATCTGAACAAC+AGG | + | tig0025867:15316-15335 | Msa1425520:CDS | 50.0% | |
| TGGTAATCCAGAGTTCGGTC+GGG | - | tig0025867:16592-16611 | None:intergenic | 50.0% | |
| CTGGTAATCCAGAGTTCGGT+CGG | - | tig0025867:16593-16612 | None:intergenic | 50.0% | |
| ! | GGCTCTGGTAATCCAGAGTT+CGG | - | tig0025867:16597-16616 | None:intergenic | 50.0% |
| ATTACCAGAGCCCTTTCCGA+TGG | + | tig0025867:16605-16624 | Msa1425520:intron | 50.0% | |
| TGTGTTCAGGATATGCTGGC+TGG | + | tig0025867:16809-16828 | Msa1425520:intron | 50.0% | |
| GGTTCTACCAGAGAAGCCAA+TGG | + | tig0025867:17021-17040 | Msa1425520:CDS | 50.0% | |
| ACTTTCTGTGAGATCCTCCG+AGG | - | tig0025867:17071-17090 | None:intergenic | 50.0% | |
| ! | CCGTTGACTGAAGAAGAAGC+TGG | + | tig0025867:17253-17272 | Msa1425520:CDS | 50.0% |
| ACTCATCAAGCGGTTACCTC+TGG | - | tig0025867:17358-17377 | None:intergenic | 50.0% | |
| CGGAAAATCGCAGTCAAGTG+TGG | + | tig0025867:17835-17854 | Msa1425520:intron | 50.0% | |
| GATGCATGCAACCTCAGTTG+TGG | + | tig0025867:17860-17879 | Msa1425520:intron | 50.0% | |
| GACACAATCATGGCGACTCA+TGG | - | tig0025867:18077-18096 | None:intergenic | 50.0% | |
| ! | CCACTGGATGTCATTTCGCA+AGG | - | tig0025867:18570-18589 | None:intergenic | 50.0% |
| CCTTGCGAAATGACATCCAG+TGG | + | tig0025867:18567-18586 | Msa1425520:intron | 50.0% | |
| CGCAACGCAAACCACAATTG+AGG | - | tig0025867:18666-18685 | None:intergenic | 50.0% | |
| CAAAGCTGGTGAAGCCCTAA+CGG | - | tig0025867:18916-18935 | None:intergenic | 50.0% | |
| ! | TAGGGCTTCACCAGCTTTGT+AGG | + | tig0025867:18917-18936 | Msa1425520:intron | 50.0% |
| ! | AGGGCTTCACCAGCTTTGTA+GGG | + | tig0025867:18918-18937 | Msa1425520:intron | 50.0% |
| TAATCCAGAGTTCGGTCGGG+AGG | - | tig0025867:16589-16608 | None:intergenic | 55.0% | |
| GTTTCCATCGGAAAGGGCTC+TGG | - | tig0025867:16612-16631 | None:intergenic | 55.0% | |
| TGGATTACTCGATCCGACCC+CGG | - | tig0025867:16893-16912 | None:intergenic | 55.0% | |
| GGAGGTCCTGTTCTTGTACC+TGG | + | tig0025867:17223-17242 | Msa1425520:CDS | 55.0% | |
| AAGGTTTGCGGCCGTGATCT+GGG | - | tig0025867:17918-17937 | None:intergenic | 55.0% | |
| AAAGGTTTGCGGCCGTGATC+TGG | - | tig0025867:17919-17938 | None:intergenic | 55.0% | |
| ! | CTGTTTGGAACCAATCGCGG+TGG | + | tig0025867:18004-18023 | Msa1425520:intron | 55.0% |
| CATCCAGTGGGGCTTCGAAA+CGG | + | tig0025867:18580-18599 | Msa1425520:intron | 55.0% | |
| TTACCGTTTCGAAGCCCCAC+TGG | - | tig0025867:18586-18605 | None:intergenic | 55.0% | |
| AACCTGGCTGGAGCAGTCCT+TGG | + | tig0025867:16553-16572 | Msa1425520:intron | 60.0% | |
| TTCGGTCGGGAGGTGAAGTC+TGG | - | tig0025867:16579-16598 | None:intergenic | 60.0% | |
| TTCACCTCCCGACCGAACTC+TGG | + | tig0025867:16582-16601 | Msa1425520:intron | 60.0% | |
| GGCTTCTCTGGTAGAACCGG+AGG | - | tig0025867:17019-17038 | None:intergenic | 60.0% | |
| GGAGCGGCACACTCATCAAG+CGG | - | tig0025867:17368-17387 | None:intergenic | 60.0% | |
| AATCACAGCGCCACCGCGAT+TGG | - | tig0025867:18017-18036 | None:intergenic | 60.0% | |
| CATCGAATGGGGCCGCGAAA+CGG | + | tig0025867:19254-19273 | Msa1425520:intron | 60.0% | |
| CGGGAGGTGAAGTCTGGCCA+AGG | - | tig0025867:16573-16592 | None:intergenic | 65.0% | |
| GGCCAAGGACTGCTCCAGCC+AGG | - | tig0025867:16558-16577 | None:intergenic | 70.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| tig0025867 | gene | 15003 | 19651 | 15003 | ID=Msa1425520;Name=Msa1425520 |
| tig0025867 | mRNA | 15003 | 19651 | 15003 | ID=Msa1425520-mRNA-1;Parent=Msa1425520;Name=Msa1425520-mRNA-1;_AED=0.22;_eAED=0.23;_QI=125|0.71|0.75|1|1|1|8|202|469 |
| tig0025867 | exon | 15003 | 15337 | 15003 | ID=Msa1425520-mRNA-1:exon:4352;Parent=Msa1425520-mRNA-1 |
| tig0025867 | exon | 16113 | 16164 | 16113 | ID=Msa1425520-mRNA-1:exon:4353;Parent=Msa1425520-mRNA-1 |
| tig0025867 | exon | 16257 | 16417 | 16257 | ID=Msa1425520-mRNA-1:exon:4354;Parent=Msa1425520-mRNA-1 |
| tig0025867 | exon | 16818 | 17360 | 16818 | ID=Msa1425520-mRNA-1:exon:4355;Parent=Msa1425520-mRNA-1 |
| tig0025867 | exon | 18422 | 18560 | 18422 | ID=Msa1425520-mRNA-1:exon:4356;Parent=Msa1425520-mRNA-1 |
| tig0025867 | exon | 18920 | 18957 | 18920 | ID=Msa1425520-mRNA-1:exon:4357;Parent=Msa1425520-mRNA-1 |
| tig0025867 | exon | 19090 | 19234 | 19090 | ID=Msa1425520-mRNA-1:exon:4358;Parent=Msa1425520-mRNA-1 |
| tig0025867 | exon | 19328 | 19651 | 19328 | ID=Msa1425520-mRNA-1:exon:4359;Parent=Msa1425520-mRNA-1 |
| tig0025867 | five_prime_UTR | 15003 | 15127 | 15003 | ID=Msa1425520-mRNA-1:five_prime_utr;Parent=Msa1425520-mRNA-1 |
| tig0025867 | CDS | 15128 | 15337 | 15128 | ID=Msa1425520-mRNA-1:cds;Parent=Msa1425520-mRNA-1 |
| tig0025867 | CDS | 16113 | 16164 | 16113 | ID=Msa1425520-mRNA-1:cds;Parent=Msa1425520-mRNA-1 |
| tig0025867 | CDS | 16257 | 16417 | 16257 | ID=Msa1425520-mRNA-1:cds;Parent=Msa1425520-mRNA-1 |
| tig0025867 | CDS | 16818 | 17360 | 16818 | ID=Msa1425520-mRNA-1:cds;Parent=Msa1425520-mRNA-1 |
| tig0025867 | CDS | 18422 | 18560 | 18422 | ID=Msa1425520-mRNA-1:cds;Parent=Msa1425520-mRNA-1 |
| tig0025867 | CDS | 18920 | 18957 | 18920 | ID=Msa1425520-mRNA-1:cds;Parent=Msa1425520-mRNA-1 |
| tig0025867 | CDS | 19090 | 19234 | 19090 | ID=Msa1425520-mRNA-1:cds;Parent=Msa1425520-mRNA-1 |
| tig0025867 | CDS | 19328 | 19449 | 19328 | ID=Msa1425520-mRNA-1:cds;Parent=Msa1425520-mRNA-1 |
| tig0025867 | three_prime_UTR | 19450 | 19651 | 19450 | ID=Msa1425520-mRNA-1:three_prime_utr;Parent=Msa1425520-mRNA-1 |
| Gene Sequence |
| Protein sequence |
