AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa0220580


Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0220580 MtrunA17_Chr2g0324241 97.287 516 14 0 1 516 1 516 0.0 1038
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0220580 AT4G28260.2 42.188 512 263 12 16 503 13 515 1.79e-131 392
Msa0220580 AT4G28260.1 42.188 512 263 12 16 503 13 515 1.79e-131 392

Find 166 sgRNAs with CRISPR-Local

Find 238 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
CAATGATTTAACTACATAAT+TGG 0.145350 2_1:-69002300 None:intergenic
TACATTGAGTTACGTGAAAA+TGG 0.149151 2_1:+68999671 Msa0220580:CDS
CGGTTACCATTTACAGTTTC+CGG 0.175675 2_1:-68999887 None:intergenic
ATTTGAAATGGGTGGGAAAT+TGG 0.183618 2_1:+68999553 Msa0220580:exon
CTTTAGGATATTATTGCTTT+TGG 0.194592 2_1:+68999452 Msa0220580:five_prime_UTR
AATTGGAAGAAACTAAAATT+AGG 0.197774 2_1:+68999275 Msa0220580:five_prime_UTR
GCTGAGAAGGATGGCTCTTT+AGG 0.220704 2_1:+69000124 Msa0220580:CDS
AATCAAAATGCTCGTCAAAA+AGG 0.245244 2_1:+69001124 Msa0220580:CDS
TACTGTTGTGGTATGCTTCT+AGG 0.251845 2_1:+68999414 Msa0220580:five_prime_UTR
AAACCAACTTTGTTTCTAAC+AGG 0.254527 2_1:+69000491 Msa0220580:CDS
GGAAAATGAAGAGGGAAAAT+TGG 0.257349 2_1:-68998956 None:intergenic
TTAGGGTTAGGGTTAGGGTT+AGG 0.265523 2_1:-68999017 None:intergenic
GGTTTGAAATCTTAATCTTT+AGG 0.271406 2_1:+68999436 Msa0220580:five_prime_UTR
CGACCCAAATCATAACTATA+TGG 0.283138 2_1:-69000247 None:intergenic
CCATGTTTACTTTGCGTAAT+CGG 0.288561 2_1:-68999177 None:intergenic
TGGGACAGAGAGCACAATTT+TGG 0.288956 2_1:-69001256 None:intergenic
GGAATGAAATTAGAAGAATT+TGG 0.291528 2_1:+69000146 Msa0220580:CDS
CTAGGGTTAGGGTTAGGGTT+AGG 0.294320 2_1:-68999023 None:intergenic
CTGAGAAGGATGGCTCTTTA+GGG 0.298151 2_1:+69000125 Msa0220580:CDS
GATGTGAAAGTTAGGAAAAT+TGG 0.302708 2_1:+69000076 Msa0220580:CDS
TTTCCCATATAGTTATGATT+TGG 0.310945 2_1:+69000243 Msa0220580:CDS
TAGGGTTAGGGTTAGGGTTA+GGG 0.311299 2_1:-68999016 None:intergenic
ATTGGAAGAAACTAAAATTA+GGG 0.313272 2_1:+68999276 Msa0220580:five_prime_UTR
AATATAAGACCATCACTAAA+AGG 0.331956 2_1:-68999833 None:intergenic
TTCCCATATAGTTATGATTT+GGG 0.338390 2_1:+69000244 Msa0220580:CDS
TTGTTTCTAACAGGGCTATC+AGG 0.342038 2_1:+69000500 Msa0220580:CDS
TTAGCTTCAACAATCTATTT+CGG 0.343141 2_1:-68999907 None:intergenic
AACGCGCTAGGGTTAGGGTT+AGG 0.344947 2_1:-68999029 None:intergenic
GAAGAAAACGCGCTAGGGTT+AGG 0.352326 2_1:-68999035 None:intergenic
AAAGAACCGGAAACTGTAAA+TGG 0.357278 2_1:+68999881 Msa0220580:CDS
TTAGAAGAATTTGGTGTGAA+TGG 0.362486 2_1:+69000155 Msa0220580:CDS
TGATGAAAGTGTGAGGAGTA+TGG 0.362974 2_1:-68998844 None:intergenic
TAGGGTTAGGGTTAGGGTTA+GGG 0.363174 2_1:-68999022 None:intergenic
TGCTGCAGTCGGAATCCAAC+TGG 0.364769 2_1:+69000643 Msa0220580:CDS
CAGAAGAGTCTCCACCTTTG+AGG 0.384028 2_1:+69000419 Msa0220580:CDS
AAGCTATTGATGTGAAAGTT+AGG 0.384527 2_1:+69000068 Msa0220580:CDS
GATTTGCAGAATTGCTCAAT+TGG 0.387845 2_1:+69001843 Msa0220580:CDS
ATGGGTGGGAAATTGGAATT+GGG 0.394636 2_1:+68999560 Msa0220580:CDS
AGGATCTTAACGATTATGTA+TGG 0.396041 2_1:-69002369 None:intergenic
CTGGAAGATGAGAGGGAAAG+TGG 0.398975 2_1:+69000331 Msa0220580:CDS
ACTGTTGTGGTATGCTTCTA+GGG 0.403209 2_1:+68999415 Msa0220580:five_prime_UTR
GCATTTCTGAATTTGAAAAC+TGG 0.404337 2_1:+69000610 Msa0220580:CDS
ACGCGCTAGGGTTAGGGTTA+GGG 0.408319 2_1:-68999028 None:intergenic
TGAGGAGTATGGGAATTAAT+TGG 0.408635 2_1:-68998833 None:intergenic
TTCTGCCAGGTTTGCTGAGA+AGG 0.410140 2_1:+69000111 Msa0220580:CDS
ATTTGAAGGGTAAGCTTCAT+AGG 0.414458 2_1:+68999762 Msa0220580:CDS
TGTCAACAAAACATGATTCC+TGG 0.416827 2_1:+69000574 Msa0220580:CDS
ATCCTCCTCTATGCTAGAAC+TGG 0.417147 2_1:+69000312 Msa0220580:CDS
TTTAGTATATGGGATGGAAA+TGG 0.418480 2_1:-68998876 None:intergenic
AATGGGTGGGAAATTGGAAT+TGG 0.429413 2_1:+68999559 Msa0220580:exon
TGTGTATCATCCCTCGCAAT+TGG 0.430510 2_1:-68999998 None:intergenic
AGAATTTGGTGTGAATGGTT+AGG 0.432596 2_1:+69000160 Msa0220580:CDS
TCACTAAAAGGCCACGGATT+CGG 0.440140 2_1:-68999821 None:intergenic
TGTCCAGAGTGTCAAGGTGC+TGG 0.444181 2_1:+69001205 Msa0220580:CDS
AAAGTTAGGAAAATTGGCTT+GGG 0.446570 2_1:+69000082 Msa0220580:CDS
ATCTGAGGGTGATAAAGAAC+CGG 0.447512 2_1:+68999868 Msa0220580:CDS
GGACAAAGTGCTTGAGGTTG+AGG 0.448153 2_1:+69000270 Msa0220580:CDS
TTCTTTGATAATTCATCTGA+GGG 0.449841 2_1:+68999854 Msa0220580:CDS
TTAGGGTTAGGGTTAGGGTT+AGG 0.450871 2_1:-68999011 None:intergenic
AAGAAAACGCGCTAGGGTTA+GGG 0.457562 2_1:-68999034 None:intergenic
ATTTGCAGAATTGCTCAATT+GGG 0.460348 2_1:+69001844 Msa0220580:CDS
GACCCAAATCATAACTATAT+GGG 0.464644 2_1:-69000246 None:intergenic
CATATAGTTATGATTTGGGT+CGG 0.470784 2_1:+69000248 Msa0220580:CDS
AATTGGGTTTCATTTCCCTT+CGG 0.472950 2_1:+69001860 Msa0220580:CDS
ACATTGAGTTACGTGAAAAT+GGG 0.473761 2_1:+68999672 Msa0220580:CDS
GCAAAGCGAATGTATGTACT+TGG 0.483632 2_1:-69002103 None:intergenic
AAAATTGTGCTCTCTGTCCC+AGG 0.484115 2_1:+69001258 Msa0220580:CDS
TATTTATTATCAACGGTGGT+TGG 0.484294 2_1:-68998799 None:intergenic
GAAAGTTAGGAAAATTGGCT+TGG 0.484708 2_1:+69000081 Msa0220580:CDS
CAGGTTCTGGTAAAGAAGAC+AGG 0.485349 2_1:+69001164 Msa0220580:CDS
GCCAGGTTTGCTGAGAAGGA+TGG 0.490722 2_1:+69000115 Msa0220580:CDS
TACATAATCGTTAAGATCCT+AGG 0.490904 2_1:+69002372 Msa0220580:three_prime_UTR
ATCATTGTTATGCACAAGCA+TGG 0.492098 2_1:+69002316 Msa0220580:three_prime_UTR
GCCATCCTTCTCAGCAAACC+TGG 0.495465 2_1:-69000116 None:intergenic
CCGTTGATAATAAATAATCA+AGG 0.496795 2_1:+68998806 Msa0220580:five_prime_UTR
TTGGGGTCTTGTTCGAATGT+TGG 0.498190 2_1:+68999578 Msa0220580:CDS
ATTTGGCCTGTGTCATACAC+TGG 0.499909 2_1:+69001059 Msa0220580:CDS
TCATTCTACAACGCAAAGAA+TGG 0.501399 2_1:+69001805 Msa0220580:CDS
CTTGTCATTATTACGAGTGT+AGG 0.504847 2_1:-69002408 None:intergenic
AGACCAGCACCTTGACACTC+TGG 0.506407 2_1:-69001208 None:intergenic
TCGAATAATCTGAGAGAGAA+AGG 0.511103 2_1:+68999605 Msa0220580:CDS
TAGGTTTCAGAGTTGATCCT+AGG 0.511436 2_1:-69002389 None:intergenic
GTTAGGGTTAGGGTTAGGAT+TGG 0.511806 2_1:-68999006 None:intergenic
TTCGAGGAGAACGAACGAAA+CGG 0.519629 2_1:-68999137 None:intergenic
AGCCCTGTTAGAAACAAAGT+TGG 0.523096 2_1:-69000494 None:intergenic
GGATCTTAACGATTATGTAT+GGG 0.524455 2_1:-69002368 None:intergenic
AATTGTGCGAATGTTGCATA+GGG 0.527136 2_1:+69002061 Msa0220580:CDS
ATATAGTTATGATTTGGGTC+GGG 0.529170 2_1:+69000249 Msa0220580:CDS
GCTTGGGGAAGATTTCTGCC+AGG 0.529306 2_1:+69000098 Msa0220580:CDS
CGACAGTTGTCGTGCCATTG+TGG 0.532307 2_1:+68999943 Msa0220580:CDS
CTGAGACACATTAGAGCTCA+AGG 0.536769 2_1:+68999641 Msa0220580:CDS
GTTCTAGCATAGAGGAGGAT+GGG 0.540583 2_1:-69000309 None:intergenic
TGATCAAGCGTCAATGTTGA+GGG 0.542843 2_1:-69000448 None:intergenic
AGAGTGAAGGAAAATGAAGA+GGG 0.543663 2_1:-68998964 None:intergenic
GAATGATCTTTAATTTCAGT+CGG 0.543899 2_1:-69001788 None:intergenic
GAGAGTGAAGGAAAATGAAG+AGG 0.543909 2_1:-68998965 None:intergenic
CCTTGATTATTTATTATCAA+CGG 0.544774 2_1:-68998806 None:intergenic
ATATGATATGTACATGCTAA+AGG 0.545332 2_1:+69002238 Msa0220580:three_prime_UTR
CCGATTACGCAAAGTAAACA+TGG 0.545466 2_1:+68999177 Msa0220580:five_prime_UTR
TTGATCAAGCGTCAATGTTG+AGG 0.546595 2_1:-69000449 None:intergenic
GATGAAAGTGTGAGGAGTAT+GGG 0.546900 2_1:-68998843 None:intergenic
TCTGATCATTGCAGATGGGT+TGG 0.549025 2_1:+69001228 Msa0220580:CDS
ATTCTTTGATAATTCATCTG+AGG 0.549643 2_1:+68999853 Msa0220580:CDS
ATCTTCCAGTTCTAGCATAG+AGG 0.549775 2_1:-69000317 None:intergenic
TCACTTGCAATCTTCAAACA+TGG 0.550872 2_1:-69000046 None:intergenic
GCTGGTCTGATCATTGCAGA+TGG 0.553045 2_1:+69001223 Msa0220580:CDS
AGTTCTAGCATAGAGGAGGA+TGG 0.554745 2_1:-69000310 None:intergenic
TGTTGTGTATGATCATTTGA+AGG 0.555077 2_1:+68999748 Msa0220580:CDS
TTGTTGAAGCTAATTGAAAG+TGG 0.555460 2_1:+68999917 Msa0220580:CDS
TTGACATCTCCATGTGTCGC+CGG 0.555776 2_1:-68999062 None:intergenic
GGGTCGGGACAAAGTGCTTG+AGG 0.558057 2_1:+69000264 Msa0220580:CDS
GAGTCTCCACCTTTGAGGAA+TGG 0.558630 2_1:+69000424 Msa0220580:CDS
ATTTGAGAAATTTACTGTTG+TGG 0.562457 2_1:+68999402 Msa0220580:five_prime_UTR
GCTAGAACTGGAAGATGAGA+GGG 0.564301 2_1:+69000324 Msa0220580:CDS
GAATTGTGCGAATGTTGCAT+AGG 0.564678 2_1:+69002060 Msa0220580:CDS
TCTTCCTCACCGGCGACACA+TGG 0.567759 2_1:+68999053 Msa0220580:five_prime_UTR
GCTGCAGTCGGAATCCAACT+GGG 0.569349 2_1:+69000644 Msa0220580:CDS
AATGCTGCTACATCTTTACC+AGG 0.569814 2_1:-69000592 None:intergenic
ACAAGCTGATGGTTCTATGT+TGG 0.573138 2_1:+69000018 Msa0220580:CDS
GGTGAGGAAGAAAACGCGCT+AGG 0.573814 2_1:-68999041 None:intergenic
CTGGTCTGATCATTGCAGAT+GGG 0.574511 2_1:+69001224 Msa0220580:CDS
AAGCGGAGAGAATGATGGAG+AGG 0.578112 2_1:-68999110 None:intergenic
GCGACACATGGAGATGTCAA+TGG 0.578961 2_1:+68999065 Msa0220580:five_prime_UTR
TGCTAGAACTGGAAGATGAG+AGG 0.578965 2_1:+69000323 Msa0220580:CDS
ATTATCAACGGTGGTTGGAG+TGG 0.581128 2_1:-68998794 None:intergenic
GGTTTGAAGAAGCTGACTGT+TGG 0.581611 2_1:-69000473 None:intergenic
TTCTAACAGGGCTATCAGGA+AGG 0.582988 2_1:+69000504 Msa0220580:CDS
GCTATCTCTTCAGATTCCGA+AGG 0.584664 2_1:-69001876 None:intergenic
AAAATCATGCTCTTGAACCT+CGG 0.590936 2_1:-69000209 None:intergenic
CGTTGATAATAAATAATCAA+GGG 0.595176 2_1:+68998807 Msa0220580:five_prime_UTR
CTTTGATGAAGCCGAATCCG+TGG 0.595795 2_1:+68999810 Msa0220580:CDS
AACCAACTTTGTTTCTAACA+GGG 0.597215 2_1:+69000492 Msa0220580:CDS
ATCTCCATGTGTCGCCGGTG+AGG 0.598508 2_1:-68999057 None:intergenic
TGATTATTTATTATCAACGG+TGG 0.599160 2_1:-68998803 None:intergenic
AAAAGAACCATCGTCTGACG+TGG 0.599417 2_1:+69000363 Msa0220580:CDS
GATCTTAACGATTATGTATG+GGG 0.602771 2_1:-69002367 None:intergenic
GCTTTGCTTACAGGAAAATG+TGG 0.604649 2_1:+69001982 Msa0220580:intron
GTGAGGAAGAAAACGCGCTA+GGG 0.604677 2_1:-68999040 None:intergenic
GTTGTGTATGATCATTTGAA+GGG 0.607449 2_1:+68999749 Msa0220580:CDS
GAAGAGTAGTTTGCTGCAGT+CGG 0.607859 2_1:+69000632 Msa0220580:CDS
AGGGATGATACACAAGCTGA+TGG 0.625901 2_1:+69000007 Msa0220580:CDS
TTCCAGTTCTAGCATAGAGG+AGG 0.629165 2_1:-69000314 None:intergenic
CAGATGCTCAACCAATTGCG+AGG 0.633041 2_1:+68999987 Msa0220580:CDS
CTCTTCATTAAAAGCCACAA+TGG 0.633534 2_1:-68999957 None:intergenic
AGATGCTCAACCAATTGCGA+GGG 0.635364 2_1:+68999988 Msa0220580:CDS
AGACCATCACTAAAAGGCCA+CGG 0.635447 2_1:-68999827 None:intergenic
GTTGAGGGTCCATTCCTCAA+AGG 0.639117 2_1:-69000433 None:intergenic
GAGGGTCCATTCCTCAAAGG+TGG 0.640328 2_1:-69000430 None:intergenic
TGGGTGGGAAATTGGAATTG+GGG 0.642436 2_1:+68999561 Msa0220580:CDS
CTATCTCTTCAGATTCCGAA+GGG 0.642532 2_1:-69001875 None:intergenic
AGGTTCTGGTAAAGAAGACA+GGG 0.650035 2_1:+69001165 Msa0220580:CDS
AAGATGTTGATGAAATCCGC+AGG 0.650707 2_1:+69000386 Msa0220580:CDS
ATCTGAGAGAGAAAGGTGCG+AGG 0.656790 2_1:+68999612 Msa0220580:CDS
CTTCTGAAGCATACTGCCTG+CGG 0.661695 2_1:-69000402 None:intergenic
ACATCTTCCACGTCAGACGA+TGG 0.661723 2_1:-69000370 None:intergenic
CTATCAGGAAGGCAATCAGA+CGG 0.662170 2_1:+69000515 Msa0220580:CDS
GAGTATCCAGTGTATGACAC+AGG 0.674182 2_1:-69001065 None:intergenic
GAGAAAACGAGAGAGAGTGA+AGG 0.674717 2_1:-68998977 None:intergenic
TCGTGCTGATGACGAGCATG+TGG 0.675216 2_1:+69002030 Msa0220580:CDS
GGAATCTGAAGAGATAGCTG+AGG 0.676818 2_1:+69001881 Msa0220580:CDS
TGAGACACATTAGAGCTCAA+GGG 0.685982 2_1:+68999642 Msa0220580:CDS
AAGTTAGGAAAATTGGCTTG+GGG 0.691599 2_1:+69000083 Msa0220580:CDS
AAATATAGAGACTGTCTGCG+AGG 0.715588 2_1:-69002188 None:intergenic
TAGTCAACAAGATGACGCCG+AGG 0.718635 2_1:+69000192 Msa0220580:CDS
CTGCAGTCGGAATCCAACTG+GGG 0.724399 2_1:+69000645 Msa0220580:CDS
TGTGCAATGATGAAAGTGTG+AGG 0.739981 2_1:-68998851 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!!! TTTTAAAGAAATCATTTTTT+TGG + chr2_1:69001542-69001561 Msa0220580:intron 10.0%
!!! TCTGAATATTTTTAGTATAT+GGG - chr2_1:68998889-68998908 None:intergenic 15.0%
!!! TTCTGAATATTTTTAGTATA+TGG - chr2_1:68998890-68998909 None:intergenic 15.0%
!!! TTTTTTTTTTTCCAAATACA+AGG + chr2_1:69001490-69001509 Msa0220580:intron 15.0%
!! TGTTAAAAAAATAGTTCATT+TGG + chr2_1:69001738-69001757 Msa0220580:intron 15.0%
!! CCTTGATTATTTATTATCAA+CGG - chr2_1:68998809-68998828 None:intergenic 20.0%
!!! CGTTGATAATAAATAATCAA+GGG + chr2_1:68998807-68998826 Msa0220580:five_prime_UTR 20.0%
!!! AATATTTTTAGTATATGGGA+TGG - chr2_1:68998885-68998904 None:intergenic 20.0%
!!! GTAATCGGTATAAAATTTTT+GGG - chr2_1:68999165-68999184 None:intergenic 20.0%
!! AATTGGAAGAAACTAAAATT+AGG + chr2_1:68999275-68999294 Msa0220580:five_prime_UTR 20.0%
!! ATTGGAAGAAACTAAAATTA+GGG + chr2_1:68999276-68999295 Msa0220580:five_prime_UTR 20.0%
!! CTGTTTGGATAAATTAAAAA+GGG - chr2_1:69000996-69001015 None:intergenic 20.0%
!! TCTGTTTGGATAAATTAAAA+AGG - chr2_1:69000997-69001016 None:intergenic 20.0%
!! TTATATTTGCATTTATATGC+AGG + chr2_1:69001021-69001040 Msa0220580:intron 20.0%
!!! TCATTTTTAAGTGTTTGTTT+AGG + chr2_1:69001386-69001405 Msa0220580:intron 20.0%
!!! CTCTAAAATGAAAAACTATT+AGG + chr2_1:69001450-69001469 Msa0220580:intron 20.0%
!!! AGCATTGATATCTTAATTTT+AGG + chr2_1:69001701-69001720 Msa0220580:intron 20.0%
!! TTTCATCTAAACATAGATAA+TGG + chr2_1:69001926-69001945 Msa0220580:intron 20.0%
!! TCTTCTAACATATATTGTAA+TGG + chr2_1:69001960-69001979 Msa0220580:intron 20.0%
!! CAATGATTTAACTACATAAT+TGG - chr2_1:69002303-69002322 None:intergenic 20.0%
! TGATTATTTATTATCAACGG+TGG - chr2_1:68998806-68998825 None:intergenic 25.0%
!!! CCGTTGATAATAAATAATCA+AGG + chr2_1:68998806-68998825 Msa0220580:five_prime_UTR 25.0%
! AGAAAAAGAGAGAAAGAAAA+TGG - chr2_1:68998933-68998952 None:intergenic 25.0%
!!! ATAAAATTTTTGGGTATTCG+AGG - chr2_1:68999156-68999175 None:intergenic 25.0%
!! CGTAATCGGTATAAAATTTT+TGG - chr2_1:68999166-68999185 None:intergenic 25.0%
! ATTTGAGAAATTTACTGTTG+TGG + chr2_1:68999402-68999421 Msa0220580:five_prime_UTR 25.0%
!! GGTTTGAAATCTTAATCTTT+AGG + chr2_1:68999436-68999455 Msa0220580:five_prime_UTR 25.0%
!!! CTTTAGGATATTATTGCTTT+TGG + chr2_1:68999452-68999471 Msa0220580:five_prime_UTR 25.0%
!! TTCAAATTTCGTATTTTCTG+TGG + chr2_1:68999525-68999544 Msa0220580:five_prime_UTR 25.0%
! TCTGTGGAAAAAATTTGAAA+TGG + chr2_1:68999541-68999560 Msa0220580:exon 25.0%
!! CTGTGGAAAAAATTTGAAAT+GGG + chr2_1:68999542-68999561 Msa0220580:exon 25.0%
! AATATAAGACCATCACTAAA+AGG - chr2_1:68999836-68999855 None:intergenic 25.0%
!! ATTCTTTGATAATTCATCTG+AGG + chr2_1:68999853-68999872 Msa0220580:CDS 25.0%
!! TTCTTTGATAATTCATCTGA+GGG + chr2_1:68999854-68999873 Msa0220580:CDS 25.0%
! TTAGCTTCAACAATCTATTT+CGG - chr2_1:68999910-68999929 None:intergenic 25.0%
! GGAATGAAATTAGAAGAATT+TGG + chr2_1:69000146-69000165 Msa0220580:CDS 25.0%
! TTTCCCATATAGTTATGATT+TGG + chr2_1:69000243-69000262 Msa0220580:CDS 25.0%
! TTCCCATATAGTTATGATTT+GGG + chr2_1:69000244-69000263 Msa0220580:CDS 25.0%
!! GCAAATATAACTTTTCTGTT+TGG - chr2_1:69001011-69001030 None:intergenic 25.0%
! ATAATATGAAGGATTAGGAA+AGG - chr2_1:69001305-69001324 None:intergenic 25.0%
! TTTCCTAATCCTTCATATTA+TGG + chr2_1:69001304-69001323 Msa0220580:intron 25.0%
! TAGAAAATGCTGAAACAAAT+GGG - chr2_1:69001331-69001350 None:intergenic 25.0%
! TTAGAAAATGCTGAAACAAA+TGG - chr2_1:69001332-69001351 None:intergenic 25.0%
!!! TTTTTTTTCCAAATACAAGG+AGG + chr2_1:69001493-69001512 Msa0220580:intron 25.0%
! TGATTTATAACTAGTTCATG+TGG - chr2_1:69001521-69001540 None:intergenic 25.0%
!! GAATGATCTTTAATTTCAGT+CGG - chr2_1:69001791-69001810 None:intergenic 25.0%
!! TAGAACTGCAACATTTTTAT+TGG - chr2_1:69002010-69002029 None:intergenic 25.0%
!! AGAATTATGTGTAGCTTTTT+AGG + chr2_1:69002133-69002152 Msa0220580:three_prime_UTR 25.0%
! ATATGATATGTACATGCTAA+AGG + chr2_1:69002238-69002257 Msa0220580:three_prime_UTR 25.0%
TATTTATTATCAACGGTGGT+TGG - chr2_1:68998802-68998821 None:intergenic 30.0%
TTTAGTATATGGGATGGAAA+TGG - chr2_1:68998879-68998898 None:intergenic 30.0%
TTCCAATTTCGAGCAAAAAA+GGG - chr2_1:68999263-68999282 None:intergenic 30.0%
! TGGAAAAAATTTGAAATGGG+TGG + chr2_1:68999545-68999564 Msa0220580:exon 30.0%
! GGAAAAAATTTGAAATGGGT+GGG + chr2_1:68999546-68999565 Msa0220580:exon 30.0%
! TTTTCACGTAACTCAATGTA+AGG - chr2_1:68999671-68999690 None:intergenic 30.0%
TACATTGAGTTACGTGAAAA+TGG + chr2_1:68999671-68999690 Msa0220580:CDS 30.0%
ACATTGAGTTACGTGAAAAT+GGG + chr2_1:68999672-68999691 Msa0220580:CDS 30.0%
TGTTGTGTATGATCATTTGA+AGG + chr2_1:68999748-68999767 Msa0220580:CDS 30.0%
GTTGTGTATGATCATTTGAA+GGG + chr2_1:68999749-68999768 Msa0220580:CDS 30.0%
TTGTTGAAGCTAATTGAAAG+TGG + chr2_1:68999917-68999936 Msa0220580:CDS 30.0%
AAGCTATTGATGTGAAAGTT+AGG + chr2_1:69000068-69000087 Msa0220580:CDS 30.0%
GATGTGAAAGTTAGGAAAAT+TGG + chr2_1:69000076-69000095 Msa0220580:CDS 30.0%
! AAAGTTAGGAAAATTGGCTT+GGG + chr2_1:69000082-69000101 Msa0220580:CDS 30.0%
!! TTAGAAGAATTTGGTGTGAA+TGG + chr2_1:69000155-69000174 Msa0220580:CDS 30.0%
GACCCAAATCATAACTATAT+GGG - chr2_1:69000249-69000268 None:intergenic 30.0%
! CATATAGTTATGATTTGGGT+CGG + chr2_1:69000248-69000267 Msa0220580:CDS 30.0%
! ATATAGTTATGATTTGGGTC+GGG + chr2_1:69000249-69000268 Msa0220580:CDS 30.0%
!! AAACCAACTTTGTTTCTAAC+AGG + chr2_1:69000491-69000510 Msa0220580:CDS 30.0%
!! AACCAACTTTGTTTCTAACA+GGG + chr2_1:69000492-69000511 Msa0220580:CDS 30.0%
GCATTTCTGAATTTGAAAAC+TGG + chr2_1:69000610-69000629 Msa0220580:CDS 30.0%
!! ACTACAGACAGTTATTTTCT+TGG - chr2_1:69000943-69000962 None:intergenic 30.0%
AAAGGGAAATGCTAACTTAA+TGG - chr2_1:69000979-69000998 None:intergenic 30.0%
AATCAAAATGCTCGTCAAAA+AGG + chr2_1:69001124-69001143 Msa0220580:CDS 30.0%
ATCAAAATGCTCGTCAAAAA+GGG + chr2_1:69001125-69001144 Msa0220580:CDS 30.0%
AAAAAGATTGTAACAGGTTC+TGG + chr2_1:69001151-69001170 Msa0220580:CDS 30.0%
AGAAAATGCTGAAACAAATG+GGG - chr2_1:69001330-69001349 None:intergenic 30.0%
AGGAATCCAAAGACAATATA+GGG - chr2_1:69001678-69001697 None:intergenic 30.0%
ATTAAGATATCAATGCTCAG+AGG - chr2_1:69001698-69001717 None:intergenic 30.0%
ATTTGCAGAATTGCTCAATT+GGG + chr2_1:69001844-69001863 Msa0220580:CDS 30.0%
GATCTTAACGATTATGTATG+GGG - chr2_1:69002370-69002389 None:intergenic 30.0%
GGATCTTAACGATTATGTAT+GGG - chr2_1:69002371-69002390 None:intergenic 30.0%
AGGATCTTAACGATTATGTA+TGG - chr2_1:69002372-69002391 None:intergenic 30.0%
TACATAATCGTTAAGATCCT+AGG + chr2_1:69002372-69002391 Msa0220580:three_prime_UTR 30.0%
! TGAGGAGTATGGGAATTAAT+TGG - chr2_1:68998836-68998855 None:intergenic 35.0%
GGAAAATGAAGAGGGAAAAT+TGG - chr2_1:68998959-68998978 None:intergenic 35.0%
AGAGTGAAGGAAAATGAAGA+GGG - chr2_1:68998967-68998986 None:intergenic 35.0%
CCATGTTTACTTTGCGTAAT+CGG - chr2_1:68999180-68999199 None:intergenic 35.0%
TCCAATTTCGAGCAAAAAAG+GGG - chr2_1:68999262-68999281 None:intergenic 35.0%
CTTCCAATTTCGAGCAAAAA+AGG - chr2_1:68999264-68999283 None:intergenic 35.0%
! ATTTGAAATGGGTGGGAAAT+TGG + chr2_1:68999553-68999572 Msa0220580:exon 35.0%
TCGAATAATCTGAGAGAGAA+AGG + chr2_1:68999605-68999624 Msa0220580:CDS 35.0%
ATTTGAAGGGTAAGCTTCAT+AGG + chr2_1:68999762-68999781 Msa0220580:CDS 35.0%
AAAGAACCGGAAACTGTAAA+TGG + chr2_1:68999881-68999900 Msa0220580:CDS 35.0%
CTCTTCATTAAAAGCCACAA+TGG - chr2_1:68999960-68999979 None:intergenic 35.0%
! CATTGTGGCTTTTAATGAAG+AGG + chr2_1:68999958-68999977 Msa0220580:CDS 35.0%
TCACTTGCAATCTTCAAACA+TGG - chr2_1:69000049-69000068 None:intergenic 35.0%
GAAAGTTAGGAAAATTGGCT+TGG + chr2_1:69000081-69000100 Msa0220580:CDS 35.0%
!! AAGTTAGGAAAATTGGCTTG+GGG + chr2_1:69000083-69000102 Msa0220580:CDS 35.0%
!! AGAATTTGGTGTGAATGGTT+AGG + chr2_1:69000160-69000179 Msa0220580:CDS 35.0%
AAAATCATGCTCTTGAACCT+CGG - chr2_1:69000212-69000231 None:intergenic 35.0%
CGACCCAAATCATAACTATA+TGG - chr2_1:69000250-69000269 None:intergenic 35.0%
TGTCAACAAAACATGATTCC+TGG + chr2_1:69000574-69000593 Msa0220580:CDS 35.0%
! TGAAATGATTTTACCCCAGT+TGG - chr2_1:69000661-69000680 None:intergenic 35.0%
AATGCACGTGTTCAAAACTT+CGG + chr2_1:69000786-69000805 Msa0220580:intron 35.0%
! ATTTTTCATTGAGTCATGCC+AGG + chr2_1:69000824-69000843 Msa0220580:intron 35.0%
! TTTTTCATTGAGTCATGCCA+GGG + chr2_1:69000825-69000844 Msa0220580:intron 35.0%
TAACTTAATGGCACAAGTCA+AGG - chr2_1:69000967-69000986 None:intergenic 35.0%
! GGCTTTTCATGTGTTTCATT+TGG + chr2_1:69001042-69001061 Msa0220580:intron 35.0%
GGGAAGAAAAAGATTGTAAC+AGG + chr2_1:69001145-69001164 Msa0220580:CDS 35.0%
TCCATGTAATGAACAAACCT+GGG - chr2_1:69001278-69001297 None:intergenic 35.0%
ATCCATGTAATGAACAAACC+TGG - chr2_1:69001279-69001298 None:intergenic 35.0%
! AAAGCACCCTATATTGTCTT+TGG + chr2_1:69001669-69001688 Msa0220580:intron 35.0%
GAGGAATCCAAAGACAATAT+AGG - chr2_1:69001679-69001698 None:intergenic 35.0%
TCATTCTACAACGCAAAGAA+TGG + chr2_1:69001805-69001824 Msa0220580:CDS 35.0%
GATTTGCAGAATTGCTCAAT+TGG + chr2_1:69001843-69001862 Msa0220580:CDS 35.0%
AATTGGGTTTCATTTCCCTT+CGG + chr2_1:69001860-69001879 Msa0220580:CDS 35.0%
! ATTGTAATGGCTTTGCTTAC+AGG + chr2_1:69001973-69001992 Msa0220580:intron 35.0%
AATTGTGCGAATGTTGCATA+GGG + chr2_1:69002061-69002080 Msa0220580:CDS 35.0%
!!! GTAGCTTTTTAGGTAGATGT+AGG + chr2_1:69002143-69002162 Msa0220580:three_prime_UTR 35.0%
ATCATTGTTATGCACAAGCA+TGG + chr2_1:69002316-69002335 Msa0220580:three_prime_UTR 35.0%
CTTGTCATTATTACGAGTGT+AGG - chr2_1:69002411-69002430 None:intergenic 35.0%
! GATGAAAGTGTGAGGAGTAT+GGG - chr2_1:68998846-68998865 None:intergenic 40.0%
! TGATGAAAGTGTGAGGAGTA+TGG - chr2_1:68998847-68998866 None:intergenic 40.0%
! TGTGCAATGATGAAAGTGTG+AGG - chr2_1:68998854-68998873 None:intergenic 40.0%
GAGAGTGAAGGAAAATGAAG+AGG - chr2_1:68998968-68998987 None:intergenic 40.0%
GAAAAAAGCGGAGAGAATGA+TGG - chr2_1:68999118-68999137 None:intergenic 40.0%
ACGAACGAAACGGAAAAAAG+CGG - chr2_1:68999130-68999149 None:intergenic 40.0%
CCGATTACGCAAAGTAAACA+TGG + chr2_1:68999177-68999196 Msa0220580:five_prime_UTR 40.0%
!!! GGTTTCACTGCTGCTTTTTA+AGG + chr2_1:68999198-68999217 Msa0220580:five_prime_UTR 40.0%
!!! TCCCCTTTTTTGCTCGAAAT+TGG + chr2_1:68999258-68999277 Msa0220580:five_prime_UTR 40.0%
TACTGTTGTGGTATGCTTCT+AGG + chr2_1:68999414-68999433 Msa0220580:five_prime_UTR 40.0%
ACTGTTGTGGTATGCTTCTA+GGG + chr2_1:68999415-68999434 Msa0220580:five_prime_UTR 40.0%
AATGGGTGGGAAATTGGAAT+TGG + chr2_1:68999559-68999578 Msa0220580:exon 40.0%
ATGGGTGGGAAATTGGAATT+GGG + chr2_1:68999560-68999579 Msa0220580:CDS 40.0%
TGAGACACATTAGAGCTCAA+GGG + chr2_1:68999642-68999661 Msa0220580:CDS 40.0%
! TCTGTGTTTTGTGTCTTGCT+CGG + chr2_1:68999711-68999730 Msa0220580:CDS 40.0%
ATCTGAGGGTGATAAAGAAC+CGG + chr2_1:68999868-68999887 Msa0220580:CDS 40.0%
CGGTTACCATTTACAGTTTC+CGG - chr2_1:68999890-68999909 None:intergenic 40.0%
! ACAAGCTGATGGTTCTATGT+TGG + chr2_1:69000018-69000037 Msa0220580:CDS 40.0%
!! GGTTCAAGAGCATGATTTTG+CGG + chr2_1:69000213-69000232 Msa0220580:CDS 40.0%
! ATCTTCCAGTTCTAGCATAG+AGG - chr2_1:69000320-69000339 None:intergenic 40.0%
! AAGATGTTGATGAAATCCGC+AGG + chr2_1:69000386-69000405 Msa0220580:CDS 40.0%
TGATCAAGCGTCAATGTTGA+GGG - chr2_1:69000451-69000470 None:intergenic 40.0%
TTGATCAAGCGTCAATGTTG+AGG - chr2_1:69000452-69000471 None:intergenic 40.0%
AGCCCTGTTAGAAACAAAGT+TGG - chr2_1:69000497-69000516 None:intergenic 40.0%
!! TTGTTTCTAACAGGGCTATC+AGG + chr2_1:69000500-69000519 Msa0220580:CDS 40.0%
AATGCTGCTACATCTTTACC+AGG - chr2_1:69000595-69000614 None:intergenic 40.0%
! AGGTTCTGGTAAAGAAGACA+GGG + chr2_1:69001165-69001184 Msa0220580:CDS 40.0%
! TCCCAGGTTTGTTCATTACA+TGG + chr2_1:69001274-69001293 Msa0220580:intron 40.0%
GGGCCATAATATGAAGGATT+AGG - chr2_1:69001310-69001329 None:intergenic 40.0%
CAAATGGGGCCATAATATGA+AGG - chr2_1:69001316-69001335 None:intergenic 40.0%
ATGTGGTACCTCCTTGTATT+TGG - chr2_1:69001504-69001523 None:intergenic 40.0%
CTATCTCTTCAGATTCCGAA+GGG - chr2_1:69001878-69001897 None:intergenic 40.0%
GCTTTGCTTACAGGAAAATG+TGG + chr2_1:69001982-69002001 Msa0220580:intron 40.0%
GAATTGTGCGAATGTTGCAT+AGG + chr2_1:69002060-69002079 Msa0220580:CDS 40.0%
GCAAAGCGAATGTATGTACT+TGG - chr2_1:69002106-69002125 None:intergenic 40.0%
AAATATAGAGACTGTCTGCG+AGG - chr2_1:69002191-69002210 None:intergenic 40.0%
! TAGGTTTCAGAGTTGATCCT+AGG - chr2_1:69002392-69002411 None:intergenic 40.0%
ATTATCAACGGTGGTTGGAG+TGG - chr2_1:68998797-68998816 None:intergenic 45.0%
GAGAAAACGAGAGAGAGTGA+AGG - chr2_1:68998980-68998999 None:intergenic 45.0%
GTTAGGGTTAGGGTTAGGAT+TGG - chr2_1:68999009-68999028 None:intergenic 45.0%
TTAGGGTTAGGGTTAGGGTT+AGG - chr2_1:68999014-68999033 None:intergenic 45.0%
TAGGGTTAGGGTTAGGGTTA+GGG - chr2_1:68999013-68999032 None:intergenic 45.0%
TTAGGGTTAGGGTTAGGGTT+AGG - chr2_1:68999014-68999033 None:intergenic 45.0%
TAGGGTTAGGGTTAGGGTTA+GGG - chr2_1:68999013-68999032 None:intergenic 45.0%
AAGAAAACGCGCTAGGGTTA+GGG - chr2_1:68999037-68999056 None:intergenic 45.0%
TTCGAGGAGAACGAACGAAA+CGG - chr2_1:68999140-68999159 None:intergenic 45.0%
TGGGTGGGAAATTGGAATTG+GGG + chr2_1:68999561-68999580 Msa0220580:CDS 45.0%
!! TTGGGGTCTTGTTCGAATGT+TGG + chr2_1:68999578-68999597 Msa0220580:CDS 45.0%
CTGAGACACATTAGAGCTCA+AGG + chr2_1:68999641-68999660 Msa0220580:CDS 45.0%
TCACTAAAAGGCCACGGATT+CGG - chr2_1:68999824-68999843 None:intergenic 45.0%
! AATCCGTGGCCTTTTAGTGA+TGG + chr2_1:68999824-68999843 Msa0220580:CDS 45.0%
AGACCATCACTAAAAGGCCA+CGG - chr2_1:68999830-68999849 None:intergenic 45.0%
AGATGCTCAACCAATTGCGA+GGG + chr2_1:68999988-69000007 Msa0220580:CDS 45.0%
TGTGTATCATCCCTCGCAAT+TGG - chr2_1:69000001-69000020 None:intergenic 45.0%
AGGGATGATACACAAGCTGA+TGG + chr2_1:69000007-69000026 Msa0220580:CDS 45.0%
CTGAGAAGGATGGCTCTTTA+GGG + chr2_1:69000125-69000144 Msa0220580:CDS 45.0%
GTTCTAGCATAGAGGAGGAT+GGG - chr2_1:69000312-69000331 None:intergenic 45.0%
! AGTTCTAGCATAGAGGAGGA+TGG - chr2_1:69000313-69000332 None:intergenic 45.0%
ATCCTCCTCTATGCTAGAAC+TGG + chr2_1:69000312-69000331 Msa0220580:CDS 45.0%
! TTCCAGTTCTAGCATAGAGG+AGG - chr2_1:69000317-69000336 None:intergenic 45.0%
TGCTAGAACTGGAAGATGAG+AGG + chr2_1:69000323-69000342 Msa0220580:CDS 45.0%
GCTAGAACTGGAAGATGAGA+GGG + chr2_1:69000324-69000343 Msa0220580:CDS 45.0%
AAAAGAACCATCGTCTGACG+TGG + chr2_1:69000363-69000382 Msa0220580:CDS 45.0%
GGTTTGAAGAAGCTGACTGT+TGG - chr2_1:69000476-69000495 None:intergenic 45.0%
TTCTAACAGGGCTATCAGGA+AGG + chr2_1:69000504-69000523 Msa0220580:CDS 45.0%
CTATCAGGAAGGCAATCAGA+CGG + chr2_1:69000515-69000534 Msa0220580:CDS 45.0%
!! GAAGAGTAGTTTGCTGCAGT+CGG + chr2_1:69000632-69000651 Msa0220580:CDS 45.0%
!! TACTTCCTTAACTTGTGCCC+TGG - chr2_1:69000845-69000864 None:intergenic 45.0%
ATTTGGCCTGTGTCATACAC+TGG + chr2_1:69001059-69001078 Msa0220580:CDS 45.0%
GAGTATCCAGTGTATGACAC+AGG - chr2_1:69001068-69001087 None:intergenic 45.0%
! CAGGTTCTGGTAAAGAAGAC+AGG + chr2_1:69001164-69001183 Msa0220580:CDS 45.0%
!! GTTTTCTGTCCAGAGTGTCA+AGG + chr2_1:69001199-69001218 Msa0220580:CDS 45.0%
CTGGTCTGATCATTGCAGAT+GGG + chr2_1:69001224-69001243 Msa0220580:CDS 45.0%
TCTGATCATTGCAGATGGGT+TGG + chr2_1:69001228-69001247 Msa0220580:CDS 45.0%
!! TGGGACAGAGAGCACAATTT+TGG - chr2_1:69001259-69001278 None:intergenic 45.0%
AAAATTGTGCTCTCTGTCCC+AGG + chr2_1:69001258-69001277 Msa0220580:CDS 45.0%
GCTATCTCTTCAGATTCCGA+AGG - chr2_1:69001879-69001898 None:intergenic 45.0%
GGAATCTGAAGAGATAGCTG+AGG + chr2_1:69001881-69001900 Msa0220580:CDS 45.0%
CTAGGGTTAGGGTTAGGGTT+AGG - chr2_1:68999026-68999045 None:intergenic 50.0%
GAAGAAAACGCGCTAGGGTT+AGG - chr2_1:68999038-68999057 None:intergenic 50.0%
GTGAGGAAGAAAACGCGCTA+GGG - chr2_1:68999043-68999062 None:intergenic 50.0%
! TAGCGCGTTTTCTTCCTCAC+CGG + chr2_1:68999043-68999062 Msa0220580:five_prime_UTR 50.0%
TTGACATCTCCATGTGTCGC+CGG - chr2_1:68999065-68999084 None:intergenic 50.0%
GCGACACATGGAGATGTCAA+TGG + chr2_1:68999065-68999084 Msa0220580:five_prime_UTR 50.0%
! AAGCGGAGAGAATGATGGAG+AGG - chr2_1:68999113-68999132 None:intergenic 50.0%
! ATCTGAGAGAGAAAGGTGCG+AGG + chr2_1:68999612-68999631 Msa0220580:CDS 50.0%
CTTTGATGAAGCCGAATCCG+TGG + chr2_1:68999810-68999829 Msa0220580:CDS 50.0%
CAGATGCTCAACCAATTGCG+AGG + chr2_1:68999987-69000006 Msa0220580:CDS 50.0%
!! TTCTGCCAGGTTTGCTGAGA+AGG + chr2_1:69000111-69000130 Msa0220580:CDS 50.0%
GCTGAGAAGGATGGCTCTTT+AGG + chr2_1:69000124-69000143 Msa0220580:CDS 50.0%
TAGTCAACAAGATGACGCCG+AGG + chr2_1:69000192-69000211 Msa0220580:CDS 50.0%
! GGACAAAGTGCTTGAGGTTG+AGG + chr2_1:69000270-69000289 Msa0220580:CDS 50.0%
CTGGAAGATGAGAGGGAAAG+TGG + chr2_1:69000331-69000350 Msa0220580:CDS 50.0%
ACATCTTCCACGTCAGACGA+TGG - chr2_1:69000373-69000392 None:intergenic 50.0%
!! CTTCTGAAGCATACTGCCTG+CGG - chr2_1:69000405-69000424 None:intergenic 50.0%
CAGAAGAGTCTCCACCTTTG+AGG + chr2_1:69000419-69000438 Msa0220580:CDS 50.0%
! GAGTCTCCACCTTTGAGGAA+TGG + chr2_1:69000424-69000443 Msa0220580:CDS 50.0%
GTTGAGGGTCCATTCCTCAA+AGG - chr2_1:69000436-69000455 None:intergenic 50.0%
TCATGCCAGGGCACAAGTTA+AGG + chr2_1:69000837-69000856 Msa0220580:intron 50.0%
! GCTGGTCTGATCATTGCAGA+TGG + chr2_1:69001223-69001242 Msa0220580:CDS 50.0%
ACGCGCTAGGGTTAGGGTTA+GGG - chr2_1:68999031-68999050 None:intergenic 55.0%
AACGCGCTAGGGTTAGGGTT+AGG - chr2_1:68999032-68999051 None:intergenic 55.0%
GGTGAGGAAGAAAACGCGCT+AGG - chr2_1:68999044-68999063 None:intergenic 55.0%
! CGACAGTTGTCGTGCCATTG+TGG + chr2_1:68999943-68999962 Msa0220580:CDS 55.0%
GCTTGGGGAAGATTTCTGCC+AGG + chr2_1:69000098-69000117 Msa0220580:CDS 55.0%
!! GCCAGGTTTGCTGAGAAGGA+TGG + chr2_1:69000115-69000134 Msa0220580:CDS 55.0%
GCCATCCTTCTCAGCAAACC+TGG - chr2_1:69000119-69000138 None:intergenic 55.0%
GAGGGTCCATTCCTCAAAGG+TGG - chr2_1:69000433-69000452 None:intergenic 55.0%
TGCTGCAGTCGGAATCCAAC+TGG + chr2_1:69000643-69000662 Msa0220580:CDS 55.0%
GCTGCAGTCGGAATCCAACT+GGG + chr2_1:69000644-69000663 Msa0220580:CDS 55.0%
CTGCAGTCGGAATCCAACTG+GGG + chr2_1:69000645-69000664 Msa0220580:CDS 55.0%
! TGTCCAGAGTGTCAAGGTGC+TGG + chr2_1:69001205-69001224 Msa0220580:CDS 55.0%
AGACCAGCACCTTGACACTC+TGG - chr2_1:69001211-69001230 None:intergenic 55.0%
! TCGTGCTGATGACGAGCATG+TGG + chr2_1:69002030-69002049 Msa0220580:CDS 55.0%
TCTTCCTCACCGGCGACACA+TGG + chr2_1:68999053-68999072 Msa0220580:five_prime_UTR 60.0%
ATCTCCATGTGTCGCCGGTG+AGG - chr2_1:68999060-68999079 None:intergenic 60.0%
! GGGTCGGGACAAAGTGCTTG+AGG + chr2_1:69000264-69000283 Msa0220580:CDS 60.0%
Chromosome Type Strat End Strand Name
chr2_1 gene 68998772 69002437 68998772 ID=Msa0220580;Name=Msa0220580
chr2_1 mRNA 68998772 69002437 68998772 ID=Msa0220580-mRNA-1;Parent=Msa0220580;Name=Msa0220580-mRNA-1;_AED=0.01;_eAED=0.01;_QI=788|1|1|1|1|1|4|356|516
chr2_1 exon 68998772 69000666 68998772 ID=Msa0220580-mRNA-1:exon:19502;Parent=Msa0220580-mRNA-1
chr2_1 exon 69001043 69001279 69001043 ID=Msa0220580-mRNA-1:exon:19503;Parent=Msa0220580-mRNA-1
chr2_1 exon 69001783 69001902 69001783 ID=Msa0220580-mRNA-1:exon:19504;Parent=Msa0220580-mRNA-1
chr2_1 exon 69001995 69002437 69001995 ID=Msa0220580-mRNA-1:exon:19505;Parent=Msa0220580-mRNA-1
chr2_1 five_prime_UTR 68998772 68999559 68998772 ID=Msa0220580-mRNA-1:five_prime_utr;Parent=Msa0220580-mRNA-1
chr2_1 CDS 68999560 69000666 68999560 ID=Msa0220580-mRNA-1:cds;Parent=Msa0220580-mRNA-1
chr2_1 CDS 69001043 69001279 69001043 ID=Msa0220580-mRNA-1:cds;Parent=Msa0220580-mRNA-1
chr2_1 CDS 69001783 69001902 69001783 ID=Msa0220580-mRNA-1:cds;Parent=Msa0220580-mRNA-1
chr2_1 CDS 69001995 69002081 69001995 ID=Msa0220580-mRNA-1:cds;Parent=Msa0220580-mRNA-1
chr2_1 three_prime_UTR 69002082 69002437 69002082 ID=Msa0220580-mRNA-1:three_prime_utr;Parent=Msa0220580-mRNA-1
Gene Sequence

>Msa0220580

ATGGGTGGGAAATTGGAATTGGGGTCTTGTTCGAATGTTGGTGCTTCGAATAATCTGAGAGAGAAAGGTGCGAGGATTATACTGAGACACATTAGAGCTCAAGGGCATCCTTACATTGAGTTACGTGAAAATGGGAAAAAGTTTATATATTTCTGTGTTTTGTGTCTTGCTCGGTGTTATAGTGATAGTGTTGTGTATGATCATTTGAAGGGTAAGCTTCATAGGTCTAGATTAGATTATGCTAGACGTACTTTGATGAAGCCGAATCCGTGGCCTTTTAGTGATGGTCTTATATTCTTTGATAATTCATCTGAGGGTGATAAAGAACCGGAAACTGTAAATGGTAACCGAAATAGATTGTTGAAGCTAATTGAAAGTGGCAACGACAGTTGTCGTGCCATTGTGGCTTTTAATGAAGAGGCTCAGTCAGATGCTCAACCAATTGCGAGGGATGATACACAAGCTGATGGTTCTATGTTGGTAATTCCATGTTTGAAGATTGCAAGTGAAGCTATTGATGTGAAAGTTAGGAAAATTGGCTTGGGGAAGATTTCTGCCAGGTTTGCTGAGAAGGATGGCTCTTTAGGGAATGAAATTAGAAGAATTTGGTGTGAATGGTTAGGAAAAGAGAATAGTCAACAAGATGACGCCGAGGTTCAAGAGCATGATTTTGCGGTTGTAGTTTTCCCATATAGTTATGATTTGGGTCGGGACAAAGTGCTTGAGGTTGAGGATGCTAAGTCATTACTCCCATCCTCCTCTATGCTAGAACTGGAAGATGAGAGGGAAAGTGGTAGAAAGAGAAAAGAACCATCGTCTGACGTGGAAGATGTTGATGAAATCCGCAGGCAGTATGCTTCAGAAGAGTCTCCACCTTTGAGGAATGGACCCTCAACATTGACGCTTGATCAATCCAACAGTCAGCTTCTTCAAACCAACTTTGTTTCTAACAGGGCTATCAGGAAGGCAATCAGACGGCGAGAGCGCTTAGCAGCAGAGAAAGTATGCAACATCTGTCAACAAAACATGATTCCTGGTAAAGATGTAGCAGCATTTCTGAATTTGAAAACTGGAAGAGTAGTTTGCTGCAGTCGGAATCCAACTGGGGCTTTTCATGTGTTTCATTTGGCCTGTGTCATACACTGGATACTCTTGTGCGAATATGAAATGATCACAGATCGTTTAGTTAATCAAAATGCTCGTCAAAAAGGGAAGAAAAAGATTGTAACAGGTTCTGGTAAAGAAGACAGGGATATAAAACATGTTTTCTGTCCAGAGTGTCAAGGTGCTGGTCTGATCATTGCAGATGGGTTGGAGCAACCAAAATTGTGCTCTCTGTCCCAGATGTTCCGACTGAAATTAAAGATCATTCTACAACGCAAAGAATGGATCAAGAGTTCTGAAGATTTGCAGAATTGCTCAATTGGGTTTCATTTCCCTTCGGAATCTGAAGAGATAGCTGAGGAAAATGTGGAGCCAATAAAAATGTTGCAGTTCTATCGTGCTGATGACGAGCATGTGGTTAGTAAGAATTGTGCGAATGTTGCATAG

Protein sequence

>Msa0220580

MGGKLELGSCSNVGASNNLREKGARIILRHIRAQGHPYIELRENGKKFIYFCVLCLARCYSDSVVYDHLKGKLHRSRLDYARRTLMKPNPWPFSDGLIFFDNSSEGDKEPETVNGNRNRLLKLIESGNDSCRAIVAFNEEAQSDAQPIARDDTQADGSMLVIPCLKIASEAIDVKVRKIGLGKISARFAEKDGSLGNEIRRIWCEWLGKENSQQDDAEVQEHDFAVVVFPYSYDLGRDKVLEVEDAKSLLPSSSMLELEDERESGRKRKEPSSDVEDVDEIRRQYASEESPPLRNGPSTLTLDQSNSQLLQTNFVSNRAIRKAIRRRERLAAEKVCNICQQNMIPGKDVAAFLNLKTGRVVCCSRNPTGAFHVFHLACVIHWILLCEYEMITDRLVNQNARQKGKKKIVTGSGKEDRDIKHVFCPECQGAGLIIADGLEQPKLCSLSQMFRLKLKIILQRKEWIKSSEDLQNCSIGFHFPSESEEIAEENVEPIKMLQFYRADDEHVVSKNCANVA*