Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1429310 | XP_013461074.1 | 48.299 | 147 | 47 | 2 | 245 | 362 | 70 | 216 | 6.35e-28 | 123 |
| Msa1429310 | XP_013461074.1 | 78.138 | 247 | 34 | 4 | 1 | 227 | 1 | 247 | 8.38e-108 | 331 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1429310 | sp|Q9ZVD2|NHL13_ARATH | 44.141 | 256 | 114 | 5 | 1 | 228 | 1 | 255 | 1.81e-65 | 215 |
| Msa1429310 | sp|Q9ZVD2|NHL13_ARATH | 34.756 | 164 | 75 | 4 | 231 | 365 | 67 | 227 | 6.00e-20 | 92.8 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1429310 | A0A072V156 | 48.299 | 147 | 47 | 2 | 245 | 362 | 70 | 216 | 3.03e-28 | 123 |
| Msa1429310 | A0A072V156 | 78.138 | 247 | 34 | 4 | 1 | 227 | 1 | 247 | 4.00e-108 | 331 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa1429310 | Msa1432830 | 0.805384 | 1.370344e-49 | -8.615850e-47 |
| Msa1253210 | Msa1429310 | 0.809372 | 1.955368e-50 | -8.615850e-47 |
| Msa0419770 | Msa1429310 | 0.980107 | 1.841081e-149 | -8.615850e-47 |
| Msa0450100 | Msa1429310 | 0.883621 | 3.842180e-71 | -8.615850e-47 |
| Msa0464670 | Msa1429310 | 0.814268 | 1.679945e-51 | -8.615850e-47 |
| Msa0510120 | Msa1429310 | 0.806566 | 7.728822e-50 | -8.615850e-47 |
| Msa0581380 | Msa1429310 | 0.801439 | 8.999400e-49 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1429310 | MtrunA17_Chr3g0118371 | 78.138 | 247 | 34 | 4 | 1 | 227 | 1 | 247 | 7.71e-112 | 331 |
| Msa1429310 | MtrunA17_Chr3g0118371 | 48.299 | 147 | 47 | 2 | 245 | 362 | 70 | 216 | 5.84e-32 | 123 |
| Msa1429310 | MtrunA17_Chr3g0118371 | 64.912 | 57 | 17 | 1 | 393 | 446 | 70 | 126 | 3.12e-14 | 72.8 |
| Msa1429310 | MtrunA17_Chr5g0440571 | 57.028 | 249 | 83 | 6 | 1 | 226 | 1 | 248 | 9.81e-87 | 266 |
| Msa1429310 | MtrunA17_Chr5g0440571 | 41.530 | 183 | 71 | 5 | 232 | 382 | 58 | 236 | 9.65e-31 | 119 |
| Msa1429310 | MtrunA17_Chr5g0440571 | 49.296 | 71 | 30 | 2 | 382 | 446 | 59 | 129 | 3.94e-14 | 72.4 |
| Msa1429310 | MtrunA17_Chr2g0281401 | 43.295 | 261 | 111 | 8 | 1 | 227 | 1 | 258 | 4.66e-54 | 182 |
| Msa1429310 | MtrunA17_Chr2g0281401 | 36.145 | 166 | 71 | 5 | 239 | 371 | 74 | 237 | 2.79e-19 | 87.8 |
| Msa1429310 | MtrunA17_Chr3g0118381 | 57.664 | 137 | 52 | 3 | 94 | 224 | 1 | 137 | 4.05e-46 | 157 |
| Msa1429310 | MtrunA17_Chr3g0118381 | 39.450 | 109 | 39 | 2 | 281 | 362 | 1 | 109 | 2.71e-16 | 75.9 |
| Msa1429310 | MtrunA17_Chr3g0118391 | 46.970 | 198 | 90 | 4 | 43 | 226 | 4 | 200 | 2.06e-41 | 147 |
| Msa1429310 | MtrunA17_Chr3g0118391 | 46.324 | 136 | 48 | 1 | 262 | 372 | 46 | 181 | 4.46e-28 | 111 |
| Msa1429310 | MtrunA17_Chr3g0115651 | 27.200 | 250 | 145 | 10 | 13 | 237 | 16 | 253 | 1.15e-16 | 79.7 |
| Msa1429310 | MtrunA17_Chr5g0433201 | 27.059 | 255 | 147 | 9 | 1 | 221 | 1 | 250 | 1.26e-15 | 77.0 |
| Msa1429310 | MtrunA17_Chr8g0382431 | 28.571 | 224 | 131 | 9 | 24 | 229 | 43 | 255 | 5.53e-14 | 72.0 |
| Msa1429310 | MtrunA17_Chr1g0188801 | 27.642 | 246 | 150 | 9 | 3 | 227 | 7 | 245 | 3.49e-13 | 69.3 |
| Msa1429310 | MtrunA17_Chr3g0109121 | 30.357 | 168 | 96 | 7 | 82 | 240 | 96 | 251 | 2.10e-11 | 64.3 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1429310 | AT2G27080.1 | 44.141 | 256 | 114 | 5 | 1 | 228 | 1 | 255 | 1.84e-66 | 215 |
| Msa1429310 | AT2G27080.1 | 34.756 | 164 | 75 | 4 | 231 | 365 | 67 | 227 | 6.10e-21 | 92.8 |
| Msa1429310 | AT2G27080.2 | 44.141 | 256 | 114 | 5 | 1 | 228 | 1 | 255 | 1.84e-66 | 215 |
| Msa1429310 | AT2G27080.2 | 34.756 | 164 | 75 | 4 | 231 | 365 | 67 | 227 | 6.10e-21 | 92.8 |
| Msa1429310 | AT5G21130.1 | 40.969 | 227 | 118 | 4 | 18 | 229 | 52 | 277 | 1.13e-47 | 166 |
| Msa1429310 | AT5G21130.1 | 34.132 | 167 | 78 | 4 | 236 | 371 | 89 | 254 | 2.34e-15 | 77.0 |
| Msa1429310 | AT5G36970.1 | 28.854 | 253 | 142 | 12 | 1 | 227 | 1 | 241 | 7.90e-15 | 74.7 |
| Msa1429310 | AT2G22180.1 | 26.638 | 229 | 133 | 10 | 23 | 232 | 79 | 291 | 1.73e-11 | 65.5 |
Find 109 sgRNAs with CRISPR-Local
Find 434 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| ACTTCTGCAACGAGTGTTAT+TGG | 0.240141 | tig0026478:+39469 | None:intergenic |
| ATTGCATATTTAGGCGGTTT+TGG | 0.261763 | tig0026478:+36485 | None:intergenic |
| ACGTTATTGATTGCATATTT+AGG | 0.272636 | tig0026478:+36476 | None:intergenic |
| GATGCTGTTGCTGTCTTTGC+TGG | 0.303551 | tig0026478:-43317 | Msa1429310:CDS |
| AACACTGTCACGTTATTTGC+TGG | 0.309736 | tig0026478:+39156 | None:intergenic |
| ATGCTATCGATTTCATATTT+AGG | 0.323377 | tig0026478:+39353 | None:intergenic |
| ATGCGGTAGGTTTGATCCTT+GGG | 0.329031 | tig0026478:+43402 | None:intergenic |
| TTGGAAGGTGGAGAGGCGTT+AGG | 0.343094 | tig0026478:+43468 | None:intergenic |
| TGTTCTGTCTGTCTATTCAT+TGG | 0.363393 | tig0026478:-36563 | Msa1429310:CDS |
| GTTACCATTATCAACCTTAA+CGG | 0.365005 | tig0026478:+39271 | None:intergenic |
| CAATGTTAAACTTGCAGAAT+CGG | 0.384265 | tig0026478:-39112 | Msa1429310:CDS |
| GACGTGGAAGGTTAGAGTTA+AGG | 0.387882 | tig0026478:-42849 | Msa1429310:CDS |
| AGGTTTGATCCTTGGGGAGC+TGG | 0.388163 | tig0026478:+43409 | None:intergenic |
| ATTTCATATTTAGGCGCTCC+TGG | 0.390446 | tig0026478:+39362 | None:intergenic |
| AATCGATAGCATCTTCGTTA+AGG | 0.391255 | tig0026478:-39342 | Msa1429310:CDS |
| TCTGCGGCGATCAACCATTA+TGG | 0.398351 | tig0026478:+36595 | None:intergenic |
| GTGCTCATGGCCATCGCTGC+CGG | 0.415051 | tig0026478:-43267 | Msa1429310:intron |
| ATCGATAGCATCTTCGTTAA+GGG | 0.422006 | tig0026478:-39341 | Msa1429310:CDS |
| GTCTCCGTTAAGGTTGATAA+TGG | 0.426804 | tig0026478:-39275 | Msa1429310:intron |
| CGGCGGCGATGGAGCGGTGT+TGG | 0.430905 | tig0026478:+43449 | None:intergenic |
| CAACCATTATGGTGAGTAGA+AGG | 0.432398 | tig0026478:+36606 | None:intergenic |
| GATGCGGTAGGTTTGATCCT+TGG | 0.434091 | tig0026478:+43401 | None:intergenic |
| CGGCATTGAACTTGCGAGAT+CGG | 0.437793 | tig0026478:-42969 | Msa1429310:CDS |
| GCGTAACGTTGTGCATTCTC+TGG | 0.446865 | tig0026478:+43372 | None:intergenic |
| ACCGCTCCATCGCCGCCGTC+CGG | 0.448630 | tig0026478:-43444 | Msa1429310:CDS |
| ATCCTCATAAGCATCGTTGT+TGG | 0.453519 | tig0026478:-36521 | Msa1429310:CDS |
| TGTTAGGTTCATTCCCTTGA+CGG | 0.454596 | tig0026478:+43188 | None:intergenic |
| AACAAGCTTGGAATCACCTA+TGG | 0.456147 | tig0026478:-36374 | Msa1429310:CDS |
| ACACGATCGATTGTGTATTT+CGG | 0.457527 | tig0026478:+43213 | None:intergenic |
| AACCAACAACGATGCTTATG+AGG | 0.468316 | tig0026478:+36519 | None:intergenic |
| TGCTGTCTTTGCTGGTTCAT+CGG | 0.470949 | tig0026478:-43309 | Msa1429310:CDS |
| ACACTGTCACGTTATTTGCT+GGG | 0.472646 | tig0026478:+39157 | None:intergenic |
| TATCCTTCTACTCACCATAA+TGG | 0.476821 | tig0026478:-36609 | Msa1429310:CDS |
| AAATAGTAGATAAAGATGTT+AGG | 0.480050 | tig0026478:+43172 | None:intergenic |
| CGTTGTGCATTCTCTGGTGG+TGG | 0.481192 | tig0026478:+43378 | None:intergenic |
| CAACGATGCTTATGAGGATA+AGG | 0.483573 | tig0026478:+36525 | None:intergenic |
| TGGAAGGTGGAGAGGCGTTA+GGG | 0.484091 | tig0026478:+43469 | None:intergenic |
| GTTTCTGTTAAAGCTGATAA+CGG | 0.484250 | tig0026478:-43135 | Msa1429310:CDS |
| CGTAAGGTTAATTCCCTTGA+CGG | 0.485685 | tig0026478:+36451 | None:intergenic |
| GGCGATGGAGCGGTGTTGGA+AGG | 0.486020 | tig0026478:+43453 | None:intergenic |
| ATCAATAACGTCTCCGTCAA+GGG | 0.488649 | tig0026478:-36464 | Msa1429310:CDS |
| ATCATTGTTACGTTATGTGC+CGG | 0.490235 | tig0026478:+36278 | None:intergenic |
| ATTTACTCTGATCGTGCTCA+TGG | 0.493417 | tig0026478:-43280 | Msa1429310:CDS |
| TCTCTGTAACGGCGTCCTGC+CGG | 0.493799 | tig0026478:-43047 | Msa1429310:CDS |
| AGAGTTTGACGTCTCCGTTA+AGG | 0.497895 | tig0026478:-39285 | Msa1429310:CDS |
| GTAGATAACGGTAACAAGCT+TGG | 0.503939 | tig0026478:-36386 | Msa1429310:intron |
| CTCTGGTGGTGGGATGCGGT+AGG | 0.506358 | tig0026478:+43389 | None:intergenic |
| AGCGTTGGTGAATGCGGTTA+CGG | 0.509259 | tig0026478:-42939 | Msa1429310:CDS |
| GAGCTGGATGACATATGTTC+CGG | 0.509609 | tig0026478:+43425 | None:intergenic |
| GCTCTCAGCTTCAACGTTAA+CGG | 0.515780 | tig0026478:+42905 | None:intergenic |
| CATATTTAGGCGCTCCTGGA+CGG | 0.520359 | tig0026478:+39366 | None:intergenic |
| CCTCCAACTTTAATCTTCAC+CGG | 0.526185 | tig0026478:+42881 | None:intergenic |
| TTAACAGAGACGTCAAACTC+TGG | 0.526751 | tig0026478:+36410 | None:intergenic |
| CATTCTCTGGTGGTGGGATG+CGG | 0.527360 | tig0026478:+43385 | None:intergenic |
| AATCGATCGTGTCTCCGTCA+AGG | 0.528158 | tig0026478:-43202 | Msa1429310:CDS |
| ATCGATCGTGTCTCCGTCAA+GGG | 0.528651 | tig0026478:-43201 | Msa1429310:CDS |
| ACGGCTGATAAAACGCCGGC+AGG | 0.534301 | tig0026478:+43032 | None:intergenic |
| TATGTTCCGGACGGCGGCGA+TGG | 0.535007 | tig0026478:+43438 | None:intergenic |
| GTAGATGTGACATTAAAAGT+TGG | 0.539833 | tig0026478:-39027 | Msa1429310:CDS |
| TCTAACGGTGGATCAGTTAA+CGG | 0.540813 | tig0026478:-42816 | Msa1429310:CDS |
| GTGTTTAACACGGTGTTGAA+AGG | 0.540958 | tig0026478:-39138 | Msa1429310:CDS |
| TCCGGACGGCGGCGATGGAG+CGG | 0.543871 | tig0026478:+43443 | None:intergenic |
| GCACCGGTGAAGATTAAAGT+TGG | 0.544024 | tig0026478:-42884 | Msa1429310:CDS |
| TTAACGGAGACGTCAAACTC+TGG | 0.544220 | tig0026478:+39287 | None:intergenic |
| GGGTGAACACGATCAGCCAT+TGG | 0.548503 | tig0026478:+43489 | None:intergenic |
| GACAGCAACAGCATCCGCAC+CGG | 0.556268 | tig0026478:+43325 | None:intergenic |
| GTTGTTAATGTTGAAGCTGC+AGG | 0.563999 | tig0026478:-39049 | Msa1429310:CDS |
| ATCGGATCAGAAAGTGTTGG+CGG | 0.566561 | tig0026478:-39094 | Msa1429310:CDS |
| AATCAATAACGTCTCCGTCA+AGG | 0.566855 | tig0026478:-36465 | Msa1429310:CDS |
| CAGACGGTGTTGAAAGGTAA+CGG | 0.567575 | tig0026478:-42989 | Msa1429310:CDS |
| GTGTTTCAGACGGTGTTGAA+AGG | 0.576347 | tig0026478:-42995 | Msa1429310:intron |
| TGATAACGGTAACAAAAGAT+CGG | 0.585074 | tig0026478:-43121 | Msa1429310:CDS |
| GGTGGATCAGTTAACGGCGC+AGG | 0.585762 | tig0026478:-42810 | Msa1429310:CDS |
| TCAGAGAGCGTTGGTGAATG+CGG | 0.587887 | tig0026478:-42945 | Msa1429310:CDS |
| AACGTTGAAGCTGAGAGCAC+CGG | 0.589685 | tig0026478:-42900 | Msa1429310:CDS |
| GATGGAGCGGTGTTGGAAGG+TGG | 0.592952 | tig0026478:+43456 | None:intergenic |
| CCGGTGAAGATTAAAGTTGG+AGG | 0.596076 | tig0026478:-42881 | Msa1429310:CDS |
| AGCGGTGTTGGAAGGTGGAG+AGG | 0.599059 | tig0026478:+43461 | None:intergenic |
| CGCCGCAAAAGTCGCCGGTG+CGG | 0.603490 | tig0026478:-43339 | Msa1429310:CDS |
| AAGTAGCAGCGGCGCTCACG+AGG | 0.604986 | tig0026478:+39396 | None:intergenic |
| ACACTCGCCGCAAAAGTCGC+CGG | 0.610216 | tig0026478:-43344 | Msa1429310:CDS |
| ACAAGCTTGGAATCACCTAT+GGG | 0.612757 | tig0026478:-36373 | Msa1429310:CDS |
| TAAGGTTGACTGTGATCTAA+CGG | 0.613562 | tig0026478:-42831 | Msa1429310:CDS |
| AAATCGTAGACAAAGACGTA+AGG | 0.613977 | tig0026478:+36435 | None:intergenic |
| TTTAACAGAAACATCAAACT+CGG | 0.615677 | tig0026478:+43146 | None:intergenic |
| AAATAGTAGACAAAGACGTA+AGG | 0.616867 | tig0026478:+39312 | None:intergenic |
| TTATTGATTGCATATTTAGG+CGG | 0.617945 | tig0026478:+36479 | None:intergenic |
| TGCGGTAGGTTTGATCCTTG+GGG | 0.618357 | tig0026478:+43403 | None:intergenic |
| GCAGGCGAAGATTGTTGACA+AGG | 0.624423 | tig0026478:-42792 | Msa1429310:CDS |
| TCTGCAACGAGTGTTATTGG+CGG | 0.625595 | tig0026478:+39472 | None:intergenic |
| AACACCGTCACGTTATTCGA+CGG | 0.636233 | tig0026478:+43013 | None:intergenic |
| GTTGTGCATTCTCTGGTGGT+GGG | 0.643760 | tig0026478:+43379 | None:intergenic |
| TAACGTTGTGCATTCTCTGG+TGG | 0.648494 | tig0026478:+43375 | None:intergenic |
| AGAATCGGATCAGAAAGTGT+TGG | 0.648982 | tig0026478:-39097 | Msa1429310:CDS |
| TTGGAGGATCTGTGAAGACG+TGG | 0.649777 | tig0026478:-42865 | Msa1429310:CDS |
| TTAACAGAAACATCAAACTC+GGG | 0.650957 | tig0026478:+43147 | None:intergenic |
| CAGAACAACAAAGACTTCTG+CGG | 0.665201 | tig0026478:+36579 | None:intergenic |
| GAGATCGGATCAGAGAGCGT+TGG | 0.672799 | tig0026478:-42954 | Msa1429310:CDS |
| AGAGGCGTTAGTCTCTGTAA+CGG | 0.674629 | tig0026478:-43058 | Msa1429310:intron |
| AGGATCTGTGAAGACGTGGA+AGG | 0.675912 | tig0026478:-42861 | Msa1429310:CDS |
| ATATGTCATCCAGCTCCCCA+AGG | 0.678653 | tig0026478:-43418 | Msa1429310:CDS |
| ATGACATATGTTCCGGACGG+CGG | 0.681432 | tig0026478:+43432 | None:intergenic |
| ACGGAAAATCAAAGTAGCAG+CGG | 0.682424 | tig0026478:+39385 | None:intergenic |
| TGGATGACATATGTTCCGGA+CGG | 0.702336 | tig0026478:+43429 | None:intergenic |
| TTCGACGGCTGATAAAACGC+CGG | 0.712718 | tig0026478:+43028 | None:intergenic |
| TGTGCCGGCTGATAAAACGC+AGG | 0.720888 | tig0026478:+36293 | None:intergenic |
| GGTTGACTGTGATCTAACGG+TGG | 0.726582 | tig0026478:-42828 | Msa1429310:CDS |
| TAACGTGACAGTGTTTAACA+CGG | 0.736567 | tig0026478:-39148 | Msa1429310:CDS |
| TCAGCCGTCGAATAACGTGA+CGG | 0.740743 | tig0026478:-43017 | Msa1429310:intron |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | AAAAAATTATTAAAAAATAT+AGG | - | tig0026478:41653-41672 | Msa1429310:intron | 0.0% |
| !!! | ATTTTCATAAGTTTTTTTTT+CGG | - | tig0026478:37180-37199 | Msa1429310:intron | 10.0% |
| !!! | ATTTTTTTTAAAATTCCAAT+TGG | - | tig0026478:38127-38146 | Msa1429310:intron | 10.0% |
| !! | TAAAAAATAATAAAAATTGG+AGG | + | tig0026478:39094-39113 | None:intergenic | 10.0% |
| !! | TTAATAAGTTTGATAAAAAA+TGG | + | tig0026478:39182-39201 | None:intergenic | 10.0% |
| !!! | ATTTTAAAAAAACATAACAA+AGG | + | tig0026478:39213-39232 | None:intergenic | 10.0% |
| !!! | TATTAACTATTTATTTTGTT+AGG | - | tig0026478:41026-41045 | Msa1429310:intron | 10.0% |
| !!! | AAATATTTAGTTTTATATAG+TGG | - | tig0026478:41957-41976 | Msa1429310:intron | 10.0% |
| !!! | GATATTATTATTTTTTTTGA+AGG | + | tig0026478:42042-42061 | None:intergenic | 10.0% |
| !!! | TTTAATTTATCTTTCTTATA+CGG | + | tig0026478:42418-42437 | None:intergenic | 10.0% |
| !! | AAATTAACTTATATTCTAAA+CGG | - | tig0026478:42580-42599 | Msa1429310:intron | 10.0% |
| !! | TAATCTATTGTCTAAAAAAA+TGG | + | tig0026478:37094-37113 | None:intergenic | 15.0% |
| !! | TCAATATAATGTATTAATGT+AGG | + | tig0026478:37352-37371 | None:intergenic | 15.0% |
| !!! | AAAAAAAATACATTGATTCA+TGG | + | tig0026478:38918-38937 | None:intergenic | 15.0% |
| !!! | TCAATGTATTTTTTTTTTGA+AGG | - | tig0026478:38922-38941 | Msa1429310:intron | 15.0% |
| !!! | TATTTTTTATACAAGATAAC+AGG | - | tig0026478:39105-39124 | Msa1429310:CDS | 15.0% |
| !!! | AGAATATCATTATTTTTTTG+AGG | - | tig0026478:39422-39441 | Msa1429310:CDS | 15.0% |
| !! | AAAAATGAATCTTAAAAAGT+TGG | - | tig0026478:39450-39469 | Msa1429310:CDS | 15.0% |
| !!! | TTTATCTTATTTTACAAAGA+TGG | - | tig0026478:39530-39549 | Msa1429310:intron | 15.0% |
| !!! | TTTTATTTAAACATCGATTT+AGG | - | tig0026478:40891-40910 | Msa1429310:intron | 15.0% |
| !! | ATTCCAAAATTGTAATAAAA+TGG | - | tig0026478:40950-40969 | Msa1429310:intron | 15.0% |
| !! | AGATAAGATAATCTTTATTA+AGG | + | tig0026478:41184-41203 | None:intergenic | 15.0% |
| !! | AAGGTTTGTAAAAAAAAAAT+TGG | - | tig0026478:41315-41334 | Msa1429310:intron | 15.0% |
| !! | AAAAAATTTGGAAGAAAATT+TGG | - | tig0026478:41852-41871 | Msa1429310:intron | 15.0% |
| !!! | AAACTAAATATTTCTAGATA+TGG | + | tig0026478:41950-41969 | None:intergenic | 15.0% |
| !! | ATGAATTATCAATTTCATAT+TGG | - | tig0026478:42085-42104 | Msa1429310:intron | 15.0% |
| !!! | ATTTCATATTGGTTATTATA+AGG | - | tig0026478:42096-42115 | Msa1429310:intron | 15.0% |
| !! | TGTACGTAATTTAAATAAAA+GGG | + | tig0026478:42219-42238 | None:intergenic | 15.0% |
| !! | TTGTACGTAATTTAAATAAA+AGG | + | tig0026478:42220-42239 | None:intergenic | 15.0% |
| !!! | AAATGTTTTATAATTTTGGA+TGG | + | tig0026478:42299-42318 | None:intergenic | 15.0% |
| !! | TCCAAAATTATAAAACATTT+CGG | - | tig0026478:42299-42318 | Msa1429310:intron | 15.0% |
| !!! | ATTTGTTAGTATTAATCAAT+TGG | + | tig0026478:42823-42842 | None:intergenic | 15.0% |
| !! | TACTATAAATAGAGAATTTA+AGG | - | tig0026478:42856-42875 | Msa1429310:CDS | 15.0% |
| !! | AAATAGTAGATAAAGATGTT+AGG | + | tig0026478:36602-36621 | None:intergenic | 20.0% |
| !! | TGGTTATGAAAATCATTATT+TGG | - | tig0026478:37025-37044 | Msa1429310:intron | 20.0% |
| !! | AAATCATTATTTGGATTTAC+CGG | - | tig0026478:37034-37053 | Msa1429310:intron | 20.0% |
| !!! | TATAAAGTGTTTTCATGATA+AGG | + | tig0026478:37228-37247 | None:intergenic | 20.0% |
| !!! | TGATAATAGCTTTTTTAACT+GGG | + | tig0026478:37664-37683 | None:intergenic | 20.0% |
| !!! | ATGATAATAGCTTTTTTAAC+TGG | + | tig0026478:37665-37684 | None:intergenic | 20.0% |
| !!! | CATTTTATGTTATCATACAT+AGG | + | tig0026478:37835-37854 | None:intergenic | 20.0% |
| !! | CTATGTATGATAACATAAAA+TGG | - | tig0026478:37833-37852 | Msa1429310:intron | 20.0% |
| !! | TAATCAATATTTATTTAGCG+TGG | - | tig0026478:38008-38027 | Msa1429310:intron | 20.0% |
| !! | TGAATTAAAGATTTGAACTT+AGG | + | tig0026478:38067-38086 | None:intergenic | 20.0% |
| !! | CATAAAGCAAATTTATAATG+AGG | + | tig0026478:38153-38172 | None:intergenic | 20.0% |
| !!! | TTTTTGTAGGATTTTTGTAT+TGG | + | tig0026478:38257-38276 | None:intergenic | 20.0% |
| !!! | GACTAATTGGATTTTTAATA+AGG | - | tig0026478:38621-38640 | Msa1429310:intron | 20.0% |
| !!! | TAATTGGATTTTTAATAAGG+TGG | - | tig0026478:38624-38643 | Msa1429310:intron | 20.0% |
| !! | TCAATGTATTCTTAAAATCT+TGG | - | tig0026478:38952-38971 | Msa1429310:intron | 20.0% |
| !! | ATAAAAATTGGAGGAAATTA+TGG | + | tig0026478:39085-39104 | None:intergenic | 20.0% |
| !!! | ACATTTGTTTGTTTTGTTTT+GGG | + | tig0026478:39140-39159 | None:intergenic | 20.0% |
| !! | ATCTATGAGAAAAATATAGA+AGG | + | tig0026478:39329-39348 | None:intergenic | 20.0% |
| !! | TTGTCACTACATATAAATTA+AGG | + | tig0026478:39384-39403 | None:intergenic | 20.0% |
| !!! | AAAGTTGGTAAAAAAAAAGT+TGG | - | tig0026478:39465-39484 | Msa1429310:CDS | 20.0% |
| !!! | AAGTTGGTAAAAAAAAAGTT+GGG | - | tig0026478:39466-39485 | Msa1429310:CDS | 20.0% |
| !!! | TTGGGAAAAATGTTTTTTTT+GGG | - | tig0026478:39484-39503 | Msa1429310:intron | 20.0% |
| !! | AAAACTAGCTGAAATTAAAT+GGG | - | tig0026478:39570-39589 | Msa1429310:intron | 20.0% |
| !! | AAACAAATCAAAAAACTGAA+AGG | - | tig0026478:40002-40021 | Msa1429310:intron | 20.0% |
| !!! | GGTGAATTTTTTTTAAAAGA+AGG | - | tig0026478:40866-40885 | Msa1429310:intron | 20.0% |
| !!! | CAACCATTTTATTACAATTT+TGG | + | tig0026478:40956-40975 | None:intergenic | 20.0% |
| !!! | TAACTATTTATTTTGTTAGG+TGG | - | tig0026478:41029-41048 | Msa1429310:intron | 20.0% |
| !! | TAATCTTTATTAAGGTAAGA+AGG | + | tig0026478:41176-41195 | None:intergenic | 20.0% |
| !!! | ACGTTAATTATGTTTTTTCA+CGG | + | tig0026478:41554-41573 | None:intergenic | 20.0% |
| !! | AATAAAGAAAAGTAAGAAAG+TGG | - | tig0026478:41769-41788 | Msa1429310:intron | 20.0% |
| !! | ATAAAGAAAAGTAAGAAAGT+GGG | - | tig0026478:41770-41789 | Msa1429310:intron | 20.0% |
| !!! | TTTTTTCCTTTACAACTTTA+GGG | + | tig0026478:41838-41857 | None:intergenic | 20.0% |
| !!! | ATTTTTTCCTTTACAACTTT+AGG | + | tig0026478:41839-41858 | None:intergenic | 20.0% |
| !! | AAGTTGTAAAGGAAAAAATT+TGG | - | tig0026478:41840-41859 | Msa1429310:intron | 20.0% |
| !! | CTATTACTTTCAAATTCTAT+TGG | - | tig0026478:42163-42182 | Msa1429310:intron | 20.0% |
| !!! | ACCGAAATGTTTTATAATTT+TGG | + | tig0026478:42303-42322 | None:intergenic | 20.0% |
| !! | AAGAGAGTAATAAGAATATA+AGG | - | tig0026478:42450-42469 | Msa1429310:intron | 20.0% |
| !! | AGAGAGTAATAAGAATATAA+GGG | - | tig0026478:42451-42470 | Msa1429310:intron | 20.0% |
| !! | CATTAATGTGACTTATAATT+TGG | - | tig0026478:42491-42510 | Msa1429310:intron | 20.0% |
| !! | TTTATAGTTGTAGAAAATGA+AGG | + | tig0026478:42627-42646 | None:intergenic | 20.0% |
| !! | AAAATTACATGTGAATCTAA+CGG | - | tig0026478:42676-42695 | Msa1429310:intron | 20.0% |
| !!! | TTATTCTTTTTGTTACAAAG+AGG | - | tig0026478:42747-42766 | Msa1429310:intron | 20.0% |
| !!! | AGTTATCTTTTTTTAGGTTT+AGG | + | tig0026478:42774-42793 | None:intergenic | 20.0% |
| !! | TAAACCTAAAAAAAGATAAC+TGG | - | tig0026478:42773-42792 | Msa1429310:intron | 20.0% |
| !!! | TTTTTGCTGAAGTTTAATTT+CGG | + | tig0026478:42800-42819 | None:intergenic | 20.0% |
| ! | TTTAACAGAAACATCAAACT+CGG | + | tig0026478:36628-36647 | None:intergenic | 25.0% |
| ! | GTAGTTATGAATTTGATCTT+TGG | - | tig0026478:37005-37024 | Msa1429310:intron | 25.0% |
| ! | ACAATTTCATTTAATTCCAC+CGG | + | tig0026478:37056-37075 | None:intergenic | 25.0% |
| ! | TATGTGATAAAGTGTATGTT+TGG | + | tig0026478:37312-37331 | None:intergenic | 25.0% |
| ! | AGATCAAAGAAGAAGAAAAA+TGG | + | tig0026478:37518-37537 | None:intergenic | 25.0% |
| ! | ATTGTACATATCATTTACAG+AGG | - | tig0026478:37728-37747 | Msa1429310:intron | 25.0% |
| ! | GGAAAATTCATTATATGCTT+TGG | - | tig0026478:37854-37873 | Msa1429310:intron | 25.0% |
| !! | TTTTTAACCCAAAAATCTTG+AGG | + | tig0026478:37939-37958 | None:intergenic | 25.0% |
| !!! | TTTAAGGTATCAAATCCTTT+TGG | - | tig0026478:38040-38059 | Msa1429310:intron | 25.0% |
| ! | AAATTTATAATGAGGCCAAT+TGG | + | tig0026478:38145-38164 | None:intergenic | 25.0% |
| ! | TATGAAGTTCTCTAATACTT+TGG | + | tig0026478:38365-38384 | None:intergenic | 25.0% |
| !! | GTCTTGTTACTTATTGTTTA+TGG | + | tig0026478:38604-38623 | None:intergenic | 25.0% |
| ! | CAATAAGTAACAAGACTAAT+TGG | - | tig0026478:38608-38627 | Msa1429310:intron | 25.0% |
| ! | TACATTGTGATAGTCAATTA+GGG | + | tig0026478:38716-38735 | None:intergenic | 25.0% |
| ! | ATACATTGTGATAGTCAATT+AGG | + | tig0026478:38717-38736 | None:intergenic | 25.0% |
| ! | TAAAGAGAGACTAATTAATG+AGG | - | tig0026478:38792-38811 | Msa1429310:intron | 25.0% |
| !!! | GACATTTGTTTGTTTTGTTT+TGG | + | tig0026478:39141-39160 | None:intergenic | 25.0% |
| ! | TACATTCTTTGAATGGATAA+TGG | + | tig0026478:39292-39311 | None:intergenic | 25.0% |
| !!! | GTTGGGAAAAATGTTTTTTT+TGG | - | tig0026478:39483-39502 | Msa1429310:intron | 25.0% |
| !!! | TGGGAAAAATGTTTTTTTTG+GGG | - | tig0026478:39485-39504 | Msa1429310:intron | 25.0% |
| ! | GAAAACTAGCTGAAATTAAA+TGG | - | tig0026478:39569-39588 | Msa1429310:intron | 25.0% |
| ! | AAACTAGCTGAAATTAAATG+GGG | - | tig0026478:39571-39590 | Msa1429310:intron | 25.0% |
| ! | TCATTGCTAGAAATATACAT+GGG | + | tig0026478:40087-40106 | None:intergenic | 25.0% |
| !!! | TGAATAGTGCATTGATTTTA+TGG | - | tig0026478:40178-40197 | Msa1429310:intron | 25.0% |
| !!! | ATGCTATCGATTTCATATTT+AGG | + | tig0026478:40421-40440 | None:intergenic | 25.0% |
| ! | AATAATACTTACAGTTGTAC+GGG | + | tig0026478:41210-41229 | None:intergenic | 25.0% |
| ! | CAATAATACTTACAGTTGTA+CGG | + | tig0026478:41211-41230 | None:intergenic | 25.0% |
| ! | TACAACTGTAAGTATTATTG+CGG | - | tig0026478:41211-41230 | Msa1429310:intron | 25.0% |
| !!! | CGTAGAAGAAATTTTAGTTA+AGG | - | tig0026478:41296-41315 | Msa1429310:intron | 25.0% |
| ! | GTAAAAAAAAAATTGGTTGC+AGG | - | tig0026478:41322-41341 | Msa1429310:intron | 25.0% |
| ! | GATTAATCATACTTCACTAT+TGG | + | tig0026478:41412-41431 | None:intergenic | 25.0% |
| !!! | TTGTTTTAGTATTGACGATA+TGG | - | tig0026478:41454-41473 | Msa1429310:intron | 25.0% |
| !!! | CGTTAATTATGTTTTTTCAC+GGG | + | tig0026478:41553-41572 | None:intergenic | 25.0% |
| ! | AAATAACCCTAAAGTTGTAA+AGG | - | tig0026478:41829-41848 | Msa1429310:intron | 25.0% |
| ! | ATTTGGAAGAAAATTTGGTA+TGG | - | tig0026478:41857-41876 | Msa1429310:intron | 25.0% |
| ! | TTTGGAAGAAAATTTGGTAT+GGG | - | tig0026478:41858-41877 | Msa1429310:intron | 25.0% |
| ! | TATGGGTAGTAAAGTAATAA+TGG | - | tig0026478:41875-41894 | Msa1429310:intron | 25.0% |
| !! | TTGTTTTCATATAATGAGAG+TGG | - | tig0026478:41905-41924 | Msa1429310:intron | 25.0% |
| !!! | AGTGGATTTTACATATTAGA+TGG | - | tig0026478:41923-41942 | Msa1429310:intron | 25.0% |
| ! | TTTATATAGTGGCGTAATTA+TGG | - | tig0026478:41968-41987 | Msa1429310:intron | 25.0% |
| ! | TAATTCATATGAAGATAGCT+AGG | + | tig0026478:42073-42092 | None:intergenic | 25.0% |
| !! | TATTTTATAACACTCGACAA+TGG | - | tig0026478:42138-42157 | Msa1429310:intron | 25.0% |
| !! | ACAAGATTTTCCTTCATTAA+TGG | - | tig0026478:42387-42406 | Msa1429310:intron | 25.0% |
| !!! | TGAAGGTATTTTCTATTTGT+TGG | + | tig0026478:42610-42629 | None:intergenic | 25.0% |
| ! | AAATTACATGTGAATCTAAC+GGG | - | tig0026478:42677-42696 | Msa1429310:intron | 25.0% |
| !! | TTATTGATTGCATATTTAGG+CGG | + | tig0026478:43295-43314 | None:intergenic | 25.0% |
| !! | ACGTTATTGATTGCATATTT+AGG | + | tig0026478:43298-43317 | None:intergenic | 25.0% |
| AACGATCAAGTAAAAAACAC+CGG | + | tig0026478:36526-36545 | None:intergenic | 30.0% | |
| TTAACAGAAACATCAAACTC+GGG | + | tig0026478:36627-36646 | None:intergenic | 30.0% | |
| GTTTCTGTTAAAGCTGATAA+CGG | - | tig0026478:36636-36655 | Msa1429310:intron | 30.0% | |
| !! | TGATAACGGTAACAAAAGAT+CGG | - | tig0026478:36650-36669 | Msa1429310:intron | 30.0% |
| ! | AAGTGTTTTCATGATAAGGT+TGG | + | tig0026478:37224-37243 | None:intergenic | 30.0% |
| GCTAAAAATTAGTACTACGA+AGG | - | tig0026478:37402-37421 | Msa1429310:intron | 30.0% | |
| CAAAGAACAGAAATTGTGTT+TGG | + | tig0026478:37466-37485 | None:intergenic | 30.0% | |
| AAGAAGAAGAAAAATGGCAA+CGG | + | tig0026478:37512-37531 | None:intergenic | 30.0% | |
| ! | GGATGATTGAGAGTTAATTT+TGG | - | tig0026478:37547-37566 | Msa1429310:intron | 30.0% |
| CGTTGCTAATGAAGAATATT+GGG | + | tig0026478:37800-37819 | None:intergenic | 30.0% | |
| ACGTTGCTAATGAAGAATAT+TGG | + | tig0026478:37801-37820 | None:intergenic | 30.0% | |
| ! | CTTTAAGCCTCAAGATTTTT+GGG | - | tig0026478:37929-37948 | Msa1429310:intron | 30.0% |
| TGACTATTATAGAATGTGAG+TGG | + | tig0026478:38223-38242 | None:intergenic | 30.0% | |
| !! | TTGTTCGTTAATGGATTATC+TGG | - | tig0026478:38426-38445 | Msa1429310:intron | 30.0% |
| GATGTCACCAAAACAAATAT+AGG | - | tig0026478:38448-38467 | Msa1429310:intron | 30.0% | |
| CAAAACAAATATAGGAGAGT+GGG | - | tig0026478:38456-38475 | Msa1429310:intron | 30.0% | |
| GGCTCTCATTATGTTAAAAT+GGG | + | tig0026478:38695-38714 | None:intergenic | 30.0% | |
| ATGTTAGGTGTTCAGTTTAT+TGG | + | tig0026478:38754-38773 | None:intergenic | 30.0% | |
| AAAATAAAATGAGACGAGCA+AGG | + | tig0026478:38862-38881 | None:intergenic | 30.0% | |
| TTGTTTCAAGATTATTGTCG+TGG | - | tig0026478:38880-38899 | Msa1429310:intron | 30.0% | |
| !! | TTTTTAGTGTGGAAGTCATT+AGG | + | tig0026478:39016-39035 | None:intergenic | 30.0% |
| !!! | TGTTGACTCATTTTTTAGTG+TGG | + | tig0026478:39027-39046 | None:intergenic | 30.0% |
| ! | ATTCTTTGAATGGATAATGG+AGG | + | tig0026478:39289-39308 | None:intergenic | 30.0% |
| TATCCATTCAAAGAATGTAC+CGG | - | tig0026478:39293-39312 | Msa1429310:CDS | 30.0% | |
| !!! | GGGAAAAATGTTTTTTTTGG+GGG | - | tig0026478:39486-39505 | Msa1429310:intron | 30.0% |
| !!! | AGTTTTCTTCTTTTAGGGTT+AGG | + | tig0026478:39556-39575 | None:intergenic | 30.0% |
| !!! | CAGCTAGTTTTCTTCTTTTA+GGG | + | tig0026478:39561-39580 | None:intergenic | 30.0% |
| !!! | TCAGCTAGTTTTCTTCTTTT+AGG | + | tig0026478:39562-39581 | None:intergenic | 30.0% |
| ACCAAACAAGTCTCTAAATT+TGG | - | tig0026478:39641-39660 | Msa1429310:intron | 30.0% | |
| ! | TCCAAATTTAGAGACTTGTT+TGG | + | tig0026478:39645-39664 | None:intergenic | 30.0% |
| AAGTCTCTAAATTTGGATTG+AGG | - | tig0026478:39648-39667 | Msa1429310:intron | 30.0% | |
| AGTCTCTAAATTTGGATTGA+GGG | - | tig0026478:39649-39668 | Msa1429310:intron | 30.0% | |
| TAAATTTGGATTGAGGGTTT+AGG | - | tig0026478:39655-39674 | Msa1429310:intron | 30.0% | |
| !! | TAATTCTTTTAGGTCGTGAT+TGG | + | tig0026478:39888-39907 | None:intergenic | 30.0% |
| ATCACGACCTAAAAGAATTA+AGG | - | tig0026478:39888-39907 | Msa1429310:intron | 30.0% | |
| ! | GGCTAATCCTTAATTCTTTT+AGG | + | tig0026478:39898-39917 | None:intergenic | 30.0% |
| GTCATTGCTAGAAATATACA+TGG | + | tig0026478:40088-40107 | None:intergenic | 30.0% | |
| !! | TGATTGGTTGGTTTGTTATT+TGG | - | tig0026478:40111-40130 | Msa1429310:intron | 30.0% |
| !!! | ATTTTGAAGGTGTTAGGAAA+CGG | + | tig0026478:40207-40226 | None:intergenic | 30.0% |
| ! | GTAAAAGGATTTGCTTACTT+TGG | + | tig0026478:40237-40256 | None:intergenic | 30.0% |
| AAATAGTAGACAAAGACGTA+AGG | + | tig0026478:40462-40481 | None:intergenic | 30.0% | |
| GTTACCATTATCAACCTTAA+CGG | + | tig0026478:40503-40522 | None:intergenic | 30.0% | |
| !! | GTTGATAATGGTAACAAGAT+TGG | - | tig0026478:40508-40527 | Msa1429310:intron | 30.0% |
| CAATGTTAAACTTGCAGAAT+CGG | - | tig0026478:40659-40678 | Msa1429310:intron | 30.0% | |
| GTAGATGTGACATTAAAAGT+TGG | - | tig0026478:40744-40763 | Msa1429310:intron | 30.0% | |
| TTGTTCACAACAATCATTGT+TGG | - | tig0026478:40844-40863 | Msa1429310:intron | 30.0% | |
| TGTTCACAACAATCATTGTT+GGG | - | tig0026478:40845-40864 | Msa1429310:intron | 30.0% | |
| ATAATACTTACAGTTGTACG+GGG | + | tig0026478:41209-41228 | None:intergenic | 30.0% | |
| ACAACTGTAAGTATTATTGC+GGG | - | tig0026478:41212-41231 | Msa1429310:intron | 30.0% | |
| !! | AAAGTGGGTTTTAGTAAAGT+GGG | - | tig0026478:41785-41804 | Msa1429310:intron | 30.0% |
| TACGTACAACAAAGATATGA+CGG | - | tig0026478:42231-42250 | Msa1429310:intron | 30.0% | |
| ! | TGACGGATATTAGATGTAAA+TGG | - | tig0026478:42248-42267 | Msa1429310:intron | 30.0% |
| TACGGTTATACCATTAATGA+AGG | + | tig0026478:42400-42419 | None:intergenic | 30.0% | |
| CAATGTAGCAAAATACATGT+TGG | + | tig0026478:42963-42982 | None:intergenic | 30.0% | |
| TCATGCTAGACAAAATACAT+TGG | + | tig0026478:43012-43031 | None:intergenic | 30.0% | |
| ! | AGTTGTGATTGGTTCTTATT+TGG | - | tig0026478:43031-43050 | Msa1429310:CDS | 30.0% |
| !! | ATTCATTGGCATCTTTTTCA+TGG | - | tig0026478:43222-43241 | Msa1429310:intron | 30.0% |
| GTCTCTGTTAAAGTAGATAA+CGG | - | tig0026478:43373-43392 | Msa1429310:CDS | 30.0% | |
| ! | TTTTTACTTGATCGTTCGTC+CGG | - | tig0026478:36530-36549 | Msa1429310:CDS | 35.0% |
| ACACGATCGATTGTGTATTT+CGG | + | tig0026478:36561-36580 | None:intergenic | 35.0% | |
| !! | AGCGTTGAAATGTTTTACAG+AGG | - | tig0026478:36695-36714 | Msa1429310:intron | 35.0% |
| TAAGGTTGACTGTGATCTAA+CGG | - | tig0026478:36940-36959 | Msa1429310:intron | 35.0% | |
| TCATTATTTGGATTTACCGG+TGG | - | tig0026478:37037-37056 | Msa1429310:intron | 35.0% | |
| AAGAAAAATGGCAACGGTTA+AGG | + | tig0026478:37506-37525 | None:intergenic | 35.0% | |
| TCTTCTTTGATCTAACCAAG+AGG | - | tig0026478:37525-37544 | Msa1429310:intron | 35.0% | |
| CTTCTTTGATCTAACCAAGA+GGG | - | tig0026478:37526-37545 | Msa1429310:intron | 35.0% | |
| CGGTGGAAATGTAAAACATT+GGG | + | tig0026478:37588-37607 | None:intergenic | 35.0% | |
| ACGGTGGAAATGTAAAACAT+TGG | + | tig0026478:37589-37608 | None:intergenic | 35.0% | |
| ! | GTTTTACATTTCCACCGTTT+TGG | - | tig0026478:37591-37610 | Msa1429310:intron | 35.0% |
| CAATATCTCAGAAAGCAATC+AGG | + | tig0026478:37617-37636 | None:intergenic | 35.0% | |
| ! | ACAATGTTAGTCTAGCACAT+GGG | + | tig0026478:37713-37732 | None:intergenic | 35.0% |
| ! | TACAATGTTAGTCTAGCACA+TGG | + | tig0026478:37714-37733 | None:intergenic | 35.0% |
| !! | TTCAACTAGCTCTGAACTTA+AGG | + | tig0026478:37757-37776 | None:intergenic | 35.0% |
| GAGCTAGTTGAAGAAAAAGA+AGG | - | tig0026478:37765-37784 | Msa1429310:intron | 35.0% | |
| !! | GCTTTAAGCCTCAAGATTTT+TGG | - | tig0026478:37928-37947 | Msa1429310:intron | 35.0% |
| ! | AGCGTGGTTGATCAATTTTA+AGG | - | tig0026478:38024-38043 | Msa1429310:intron | 35.0% |
| GATTTGAACTTAGGACCAAA+AGG | + | tig0026478:38058-38077 | None:intergenic | 35.0% | |
| CAATGGATCTTGTTCGTTAA+TGG | - | tig0026478:38417-38436 | Msa1429310:intron | 35.0% | |
| ! | CCACTCTCCTATATTTGTTT+TGG | + | tig0026478:38458-38477 | None:intergenic | 35.0% |
| CCAAAACAAATATAGGAGAG+TGG | - | tig0026478:38455-38474 | Msa1429310:intron | 35.0% | |
| GGGCTCTCATTATGTTAAAA+TGG | + | tig0026478:38696-38715 | None:intergenic | 35.0% | |
| GTTCAGTTTATTGGAGATCA+TGG | + | tig0026478:38745-38764 | None:intergenic | 35.0% | |
| AAAACATAACAAAGGCTCAG+AGG | + | tig0026478:39205-39224 | None:intergenic | 35.0% | |
| ATTGGAAGAAAGGTTTAGGA+GGG | + | tig0026478:39870-39889 | None:intergenic | 35.0% | |
| !! | TTAGCTAATTTTGGGTGTGA+TGG | + | tig0026478:39922-39941 | None:intergenic | 35.0% |
| ! | CGGACTTCTTAGCTAATTTT+GGG | + | tig0026478:39930-39949 | None:intergenic | 35.0% |
| AGAAATATACATGGGAGGTA+CGG | + | tig0026478:40079-40098 | None:intergenic | 35.0% | |
| TTGCTAGAAATATACATGGG+AGG | + | tig0026478:40084-40103 | None:intergenic | 35.0% | |
| ! | TTCTAGCAATGACTTGTGAT+TGG | - | tig0026478:40095-40114 | Msa1429310:intron | 35.0% |
| !!! | GTTGTGATTTTGAAGGTGTT+AGG | + | tig0026478:40213-40232 | None:intergenic | 35.0% |
| !!! | CTTTGGAGTTGTGATTTTGA+AGG | + | tig0026478:40220-40239 | None:intergenic | 35.0% |
| AAAGTTGTGATCATCCATTG+GGG | + | tig0026478:40263-40282 | None:intergenic | 35.0% | |
| GAAAGTTGTGATCATCCATT+GGG | + | tig0026478:40264-40283 | None:intergenic | 35.0% | |
| ! | GTTGTTGTCGTTCTTTTTGT+CGG | - | tig0026478:40323-40342 | Msa1429310:intron | 35.0% |
| AATCGATAGCATCTTCGTTA+AGG | - | tig0026478:40429-40448 | Msa1429310:intron | 35.0% | |
| ATCGATAGCATCTTCGTTAA+GGG | - | tig0026478:40430-40449 | Msa1429310:intron | 35.0% | |
| AACAAGATTGGCATCTACTA+TGG | - | tig0026478:40520-40539 | Msa1429310:intron | 35.0% | |
| ACAAGATTGGCATCTACTAT+GGG | - | tig0026478:40521-40540 | Msa1429310:intron | 35.0% | |
| TAACGTGACAGTGTTTAACA+CGG | - | tig0026478:40623-40642 | Msa1429310:intron | 35.0% | |
| AGTTGGAAAAATGAACACGA+TGG | - | tig0026478:40761-40780 | Msa1429310:intron | 35.0% | |
| TACGTTTGAATGCAATGTGA+CGG | - | tig0026478:40794-40813 | Msa1429310:intron | 35.0% | |
| CATGTGATTCTACAAAACGT+AGG | + | tig0026478:41129-41148 | None:intergenic | 35.0% | |
| !! | GAAAGTGGGTTTTAGTAAAG+TGG | - | tig0026478:41784-41803 | Msa1429310:intron | 35.0% |
| !! | AGTAAAGTGGGTTTTGATAG+TGG | - | tig0026478:41797-41816 | Msa1429310:intron | 35.0% |
| !!! | CGGTCCAGTTATCTTTTTTT+AGG | + | tig0026478:42780-42799 | None:intergenic | 35.0% |
| TGTAGCAAAATACATGTTGG+AGG | + | tig0026478:42960-42979 | None:intergenic | 35.0% | |
| TATCCTTCTACTCACCATAA+TGG | - | tig0026478:43162-43181 | Msa1429310:CDS | 35.0% | |
| TGTTCTGTCTGTCTATTCAT+TGG | - | tig0026478:43208-43227 | Msa1429310:CDS | 35.0% | |
| ! | ATTGCATATTTAGGCGGTTT+TGG | + | tig0026478:43289-43308 | None:intergenic | 35.0% |
| AAATCGTAGACAAAGACGTA+AGG | + | tig0026478:43339-43358 | None:intergenic | 35.0% | |
| !!! | AACAACGTTGTTTTTCCCAT+AGG | + | tig0026478:43416-43435 | None:intergenic | 35.0% |
| ATTTACTCTGATCGTGCTCA+TGG | - | tig0026478:36491-36510 | Msa1429310:CDS | 40.0% | |
| !! | ATTGTGTATTTCGGTGCTTC+CGG | + | tig0026478:36552-36571 | None:intergenic | 40.0% |
| TGTTAGGTTCATTCCCTTGA+CGG | + | tig0026478:36586-36605 | None:intergenic | 40.0% | |
| CCTCCAACTTTAATCTTCAC+CGG | + | tig0026478:36893-36912 | None:intergenic | 40.0% | |
| TCTAACGGTGGATCAGTTAA+CGG | - | tig0026478:36955-36974 | Msa1429310:intron | 40.0% | |
| AAAATGGCAACGGTTAAGGT+AGG | + | tig0026478:37502-37521 | None:intergenic | 40.0% | |
| TAACTCTCAATCATCCCTCT+TGG | + | tig0026478:37543-37562 | None:intergenic | 40.0% | |
| AGAAAGCAATCAGGCCAAAA+CGG | + | tig0026478:37608-37627 | None:intergenic | 40.0% | |
| ACCTTATGTCTTAACGTGAC+CGG | - | tig0026478:37686-37705 | Msa1429310:intron | 40.0% | |
| ! | CAATGTTAGTCTAGCACATG+GGG | + | tig0026478:37712-37731 | None:intergenic | 40.0% |
| TTCATTAGCAACGTGATGCA+GGG | - | tig0026478:37807-37826 | Msa1429310:intron | 40.0% | |
| CTTTATGCCTCTTGACATGT+TGG | - | tig0026478:38166-38185 | Msa1429310:intron | 40.0% | |
| TAATCCCTAAGTCTGAGTCA+GGG | + | tig0026478:38197-38216 | None:intergenic | 40.0% | |
| ! | TTGAGAGCTTGGGTTTTTGT+AGG | + | tig0026478:38270-38289 | None:intergenic | 40.0% |
| AAAAACCCAAGCTCTCAAGT+AGG | - | tig0026478:38272-38291 | Msa1429310:intron | 40.0% | |
| ATGATCCTACTTGAGAGCTT+GGG | + | tig0026478:38280-38299 | None:intergenic | 40.0% | |
| TCCATTGATCTTCACTAGCT+GGG | + | tig0026478:38404-38423 | None:intergenic | 40.0% | |
| ATCCATTGATCTTCACTAGC+TGG | + | tig0026478:38405-38424 | None:intergenic | 40.0% | |
| CCTTGTATGGATGTGATTGT+AGG | + | tig0026478:38501-38520 | None:intergenic | 40.0% | |
| CCTACAATCACATCCATACA+AGG | - | tig0026478:38498-38517 | Msa1429310:intron | 40.0% | |
| CTTATTCTTCCCAACGAGTT+CGG | - | tig0026478:38541-38560 | Msa1429310:intron | 40.0% | |
| CATCTAACAACCACTCGTAA+TGG | + | tig0026478:38671-38690 | None:intergenic | 40.0% | |
| TCAAGATTATTGTCGTGGAG+AGG | - | tig0026478:38885-38904 | Msa1429310:intron | 40.0% | |
| CAAGATTATTGTCGTGGAGA+GGG | - | tig0026478:38886-38905 | Msa1429310:intron | 40.0% | |
| AGTCCGGTACATTCTTTGAA+TGG | + | tig0026478:39299-39318 | None:intergenic | 40.0% | |
| TATAGAAGGACAACGTAGTC+CGG | + | tig0026478:39315-39334 | None:intergenic | 40.0% | |
| ATTTGGATTGAGGGTTTAGG+AGG | - | tig0026478:39658-39677 | Msa1429310:intron | 40.0% | |
| TTTGGATTGAGGGTTTAGGA+GGG | - | tig0026478:39659-39678 | Msa1429310:intron | 40.0% | |
| TTGGAAGAAAGGTTTAGGAG+GGG | + | tig0026478:39869-39888 | None:intergenic | 40.0% | |
| GATTGGAAGAAAGGTTTAGG+AGG | + | tig0026478:39871-39890 | None:intergenic | 40.0% | |
| CGTGATTGGAAGAAAGGTTT+AGG | + | tig0026478:39874-39893 | None:intergenic | 40.0% | |
| TTAGGTCGTGATTGGAAGAA+AGG | + | tig0026478:39880-39899 | None:intergenic | 40.0% | |
| ! | GCGGACTTCTTAGCTAATTT+TGG | + | tig0026478:39931-39950 | None:intergenic | 40.0% |
| GCATAACAAGCGTTTGCTTT+AGG | - | tig0026478:39957-39976 | Msa1429310:intron | 40.0% | |
| ! | AGCAATGACTTGTGATTGGT+TGG | - | tig0026478:40099-40118 | Msa1429310:intron | 40.0% |
| ! | AATCCTTTTACTCACCCCAA+TGG | - | tig0026478:40246-40265 | Msa1429310:intron | 40.0% |
| GGAAAGTTGTGATCATCCAT+TGG | + | tig0026478:40265-40284 | None:intergenic | 40.0% | |
| ACTTCTGCAACGAGTGTTAT+TGG | + | tig0026478:40305-40324 | None:intergenic | 40.0% | |
| !!! | CGTTCTTTTTGTCGGCTTAT+TGG | - | tig0026478:40331-40350 | Msa1429310:intron | 40.0% |
| ACGGAAAATCAAAGTAGCAG+CGG | + | tig0026478:40389-40408 | None:intergenic | 40.0% | |
| ATTTCATATTTAGGCGCTCC+TGG | + | tig0026478:40412-40431 | None:intergenic | 40.0% | |
| !! | GTCTCCGTTAAGGTTGATAA+TGG | - | tig0026478:40496-40515 | Msa1429310:intron | 40.0% |
| TAGAGACATTCAGCTCTCTA+AGG | - | tig0026478:40570-40589 | Msa1429310:intron | 40.0% | |
| AGAGACATTCAGCTCTCTAA+GGG | - | tig0026478:40571-40590 | Msa1429310:intron | 40.0% | |
| ACACTGTCACGTTATTTGCT+GGG | + | tig0026478:40617-40636 | None:intergenic | 40.0% | |
| AACACTGTCACGTTATTTGC+TGG | + | tig0026478:40618-40637 | None:intergenic | 40.0% | |
| ! | GTGTTTAACACGGTGTTGAA+AGG | - | tig0026478:40633-40652 | Msa1429310:intron | 40.0% |
| ! | AGAATCGGATCAGAAAGTGT+TGG | - | tig0026478:40674-40693 | Msa1429310:intron | 40.0% |
| GTTGTTAATGTTGAAGCTGC+AGG | - | tig0026478:40722-40741 | Msa1429310:intron | 40.0% | |
| GGGAAACTGGATTATGTGTA+GGG | + | tig0026478:41083-41102 | None:intergenic | 40.0% | |
| CTACAAAACGTAGGTACAGA+AGG | + | tig0026478:41120-41139 | None:intergenic | 40.0% | |
| ! | TACATGTGAATCTAACGGGT+AGG | - | tig0026478:42681-42700 | Msa1429310:intron | 40.0% |
| ! | ATACATGTTGGAGGTATAGC+AGG | + | tig0026478:42951-42970 | None:intergenic | 40.0% |
| TGTCTAGCATGAGTTGTGAT+TGG | - | tig0026478:43020-43039 | Msa1429310:CDS | 40.0% | |
| ! | CTTTGGAGATGTGAATGTGA+AGG | + | tig0026478:43136-43155 | None:intergenic | 40.0% |
| GTAGAAGGATATGCACACTT+TGG | + | tig0026478:43153-43172 | None:intergenic | 40.0% | |
| CAACCATTATGGTGAGTAGA+AGG | + | tig0026478:43168-43187 | None:intergenic | 40.0% | |
| CAGAACAACAAAGACTTCTG+CGG | + | tig0026478:43195-43214 | None:intergenic | 40.0% | |
| CAACGATGCTTATGAGGATA+AGG | + | tig0026478:43249-43268 | None:intergenic | 40.0% | |
| ! | ATCCTCATAAGCATCGTTGT+TGG | - | tig0026478:43250-43269 | Msa1429310:intron | 40.0% |
| AACCAACAACGATGCTTATG+AGG | + | tig0026478:43255-43274 | None:intergenic | 40.0% | |
| AATCAATAACGTCTCCGTCA+AGG | - | tig0026478:43306-43325 | Msa1429310:CDS | 40.0% | |
| ATCAATAACGTCTCCGTCAA+GGG | - | tig0026478:43307-43326 | Msa1429310:CDS | 40.0% | |
| CGTAAGGTTAATTCCCTTGA+CGG | + | tig0026478:43323-43342 | None:intergenic | 40.0% | |
| TTAACAGAGACGTCAAACTC+TGG | + | tig0026478:43364-43383 | None:intergenic | 40.0% | |
| ! | GTAGATAACGGTAACAAGCT+TGG | - | tig0026478:43385-43404 | Msa1429310:CDS | 40.0% |
| AACAAGCTTGGAATCACCTA+TGG | - | tig0026478:43397-43416 | Msa1429310:CDS | 40.0% | |
| ACAAGCTTGGAATCACCTAT+GGG | - | tig0026478:43398-43417 | Msa1429310:CDS | 40.0% | |
| TGGATGACATATGTTCCGGA+CGG | + | tig0026478:36345-36364 | None:intergenic | 45.0% | |
| GAGCTGGATGACATATGTTC+CGG | + | tig0026478:36349-36368 | None:intergenic | 45.0% | |
| ATGCGGTAGGTTTGATCCTT+GGG | + | tig0026478:36372-36391 | None:intergenic | 45.0% | |
| TAACGTTGTGCATTCTCTGG+TGG | + | tig0026478:36399-36418 | None:intergenic | 45.0% | |
| !! | TGCTGTCTTTGCTGGTTCAT+CGG | - | tig0026478:36462-36481 | Msa1429310:CDS | 45.0% |
| !! | AGAGGCGTTAGTCTCTGTAA+CGG | - | tig0026478:36713-36732 | Msa1429310:intron | 45.0% |
| AACACCGTCACGTTATTCGA+CGG | + | tig0026478:36761-36780 | None:intergenic | 45.0% | |
| TAACGTGACGGTGTTTCAGA+CGG | - | tig0026478:36766-36785 | Msa1429310:intron | 45.0% | |
| ! | GTGTTTCAGACGGTGTTGAA+AGG | - | tig0026478:36776-36795 | Msa1429310:intron | 45.0% |
| ! | CAGACGGTGTTGAAAGGTAA+CGG | - | tig0026478:36782-36801 | Msa1429310:intron | 45.0% |
| GCTCTCAGCTTCAACGTTAA+CGG | + | tig0026478:36869-36888 | None:intergenic | 45.0% | |
| ! | GCACCGGTGAAGATTAAAGT+TGG | - | tig0026478:36887-36906 | Msa1429310:intron | 45.0% |
| CCGGTGAAGATTAAAGTTGG+AGG | - | tig0026478:36890-36909 | Msa1429310:intron | 45.0% | |
| GACGTGGAAGGTTAGAGTTA+AGG | - | tig0026478:36922-36941 | Msa1429310:intron | 45.0% | |
| CTTCATTAGCAACGTGATGC+AGG | - | tig0026478:37806-37825 | Msa1429310:intron | 45.0% | |
| TGGTGATAACAACTCAGACC+AGG | - | tig0026478:37874-37893 | Msa1429310:intron | 45.0% | |
| GTAATCCCTAAGTCTGAGTC+AGG | + | tig0026478:38198-38217 | None:intergenic | 45.0% | |
| CATGATCCTACTTGAGAGCT+TGG | + | tig0026478:38281-38300 | None:intergenic | 45.0% | |
| ACCCAGCTAGTGAAGATCAA+TGG | - | tig0026478:38400-38419 | Msa1429310:intron | 45.0% | |
| TCACATCCATACAAGGAGAG+TGG | - | tig0026478:38505-38524 | Msa1429310:intron | 45.0% | |
| CACATCCATACAAGGAGAGT+GGG | - | tig0026478:38506-38525 | Msa1429310:intron | 45.0% | |
| ACATCCATACAAGGAGAGTG+GGG | - | tig0026478:38507-38526 | Msa1429310:intron | 45.0% | |
| AACTCTTAGCCGAACTCGTT+GGG | + | tig0026478:38553-38572 | None:intergenic | 45.0% | |
| AAACTCTTAGCCGAACTCGT+TGG | + | tig0026478:38554-38573 | None:intergenic | 45.0% | |
| ATGGAGCAAGAGTTTAGTCG+AGG | + | tig0026478:38585-38604 | None:intergenic | 45.0% | |
| CTCTCTTTAGATGCGCAGAA+GGG | + | tig0026478:38781-38800 | None:intergenic | 45.0% | |
| TCTCTCTTTAGATGCGCAGA+AGG | + | tig0026478:38782-38801 | None:intergenic | 45.0% | |
| !! | GCTAATTTTGGGTGTGATGG+AGG | + | tig0026478:39919-39938 | None:intergenic | 45.0% |
| TAGCTAAGAAGTCCGCACAA+CGG | - | tig0026478:39935-39954 | Msa1429310:intron | 45.0% | |
| ! | ATATACATGGGAGGTACGGA+CGG | + | tig0026478:40075-40094 | None:intergenic | 45.0% |
| CATCCATTGGGGTGAGTAAA+AGG | + | tig0026478:40252-40271 | None:intergenic | 45.0% | |
| ! | TCTGCAACGAGTGTTATTGG+CGG | + | tig0026478:40302-40321 | None:intergenic | 45.0% |
| !! | GCTACTTTGATTTTCCGTCC+AGG | - | tig0026478:40391-40410 | Msa1429310:intron | 45.0% |
| TTAACGGAGACGTCAAACTC+TGG | + | tig0026478:40487-40506 | None:intergenic | 45.0% | |
| AGAGTTTGACGTCTCCGTTA+AGG | - | tig0026478:40486-40505 | Msa1429310:intron | 45.0% | |
| !! | ATCGGATCAGAAAGTGTTGG+CGG | - | tig0026478:40677-40696 | Msa1429310:intron | 45.0% |
| GAAAAATGAACACGATGGCG+AGG | - | tig0026478:40766-40785 | Msa1429310:intron | 45.0% | |
| !! | GGTTGATGAGTTAACAGAGC+AGG | - | tig0026478:40815-40834 | Msa1429310:intron | 45.0% |
| GGGGAAACTGGATTATGTGT+AGG | + | tig0026478:41084-41103 | None:intergenic | 45.0% | |
| AATCCAGTTTCCCCTGATCT+TGG | - | tig0026478:41090-41109 | Msa1429310:intron | 45.0% | |
| ! | AGAAGGTGTACCAAGATCAG+GGG | + | tig0026478:41103-41122 | None:intergenic | 45.0% |
| ! | CAGAAGGTGTACCAAGATCA+GGG | + | tig0026478:41104-41123 | None:intergenic | 45.0% |
| ! | ACAGAAGGTGTACCAAGATC+AGG | + | tig0026478:41105-41124 | None:intergenic | 45.0% |
| TGGAAACTAAGCACGATCAG+AGG | + | tig0026478:41263-41282 | None:intergenic | 45.0% | |
| TGAAGCCTTCACGATACAGT+TGG | - | tig0026478:42881-42900 | Msa1429310:CDS | 45.0% | |
| CAACTCCAACTGTATCGTGA+AGG | + | tig0026478:42889-42908 | None:intergenic | 45.0% | |
| ! | TGGAGGTATAGCAGGAAACA+TGG | + | tig0026478:42943-42962 | None:intergenic | 45.0% |
| !! | GTATAAAAAATAATAAAAAT+TGG | + | tig0026478:39097-39116 | None:intergenic | 5.0% |
| !!! | AATAATTTTTTTTTTTATAG+AGG | + | tig0026478:41644-41663 | None:intergenic | 5.0% |
| !!! | TATTATTTTTATCAAATTTT+TGG | + | tig0026478:42012-42031 | None:intergenic | 5.0% |
| !! | AAAAATAATAATATCATTTA+AGG | - | tig0026478:42047-42066 | Msa1429310:intron | 5.0% |
| ATGACATATGTTCCGGACGG+CGG | + | tig0026478:36342-36361 | None:intergenic | 50.0% | |
| ATATGTCATCCAGCTCCCCA+AGG | - | tig0026478:36353-36372 | Msa1429310:CDS | 50.0% | |
| TGCGGTAGGTTTGATCCTTG+GGG | + | tig0026478:36371-36390 | None:intergenic | 50.0% | |
| GATGCGGTAGGTTTGATCCT+TGG | + | tig0026478:36373-36392 | None:intergenic | 50.0% | |
| GTTGTGCATTCTCTGGTGGT+GGG | + | tig0026478:36395-36414 | None:intergenic | 50.0% | |
| GCGTAACGTTGTGCATTCTC+TGG | + | tig0026478:36402-36421 | None:intergenic | 50.0% | |
| ! | ACTTTTGCGGCGAGTGTAGT+TGG | + | tig0026478:36424-36443 | None:intergenic | 50.0% |
| GATGCTGTTGCTGTCTTTGC+TGG | - | tig0026478:36454-36473 | Msa1429310:CDS | 50.0% | |
| GTAAAAAACACCGGCAGCGA+TGG | + | tig0026478:36517-36536 | None:intergenic | 50.0% | |
| AATCGATCGTGTCTCCGTCA+AGG | - | tig0026478:36569-36588 | Msa1429310:CDS | 50.0% | |
| ATCGATCGTGTCTCCGTCAA+GGG | - | tig0026478:36570-36589 | Msa1429310:CDS | 50.0% | |
| TTCGACGGCTGATAAAACGC+CGG | + | tig0026478:36746-36765 | None:intergenic | 50.0% | |
| TCAGCCGTCGAATAACGTGA+CGG | - | tig0026478:36754-36773 | Msa1429310:intron | 50.0% | |
| ! | CGGCATTGAACTTGCGAGAT+CGG | - | tig0026478:36802-36821 | Msa1429310:intron | 50.0% |
| !! | TCAGAGAGCGTTGGTGAATG+CGG | - | tig0026478:36826-36845 | Msa1429310:intron | 50.0% |
| !! | AGCGTTGGTGAATGCGGTTA+CGG | - | tig0026478:36832-36851 | Msa1429310:intron | 50.0% |
| ! | AACGTTGAAGCTGAGAGCAC+CGG | - | tig0026478:36871-36890 | Msa1429310:intron | 50.0% |
| TTGGAGGATCTGTGAAGACG+TGG | - | tig0026478:36906-36925 | Msa1429310:intron | 50.0% | |
| AGGATCTGTGAAGACGTGGA+AGG | - | tig0026478:36910-36929 | Msa1429310:intron | 50.0% | |
| GGTTGACTGTGATCTAACGG+TGG | - | tig0026478:36943-36962 | Msa1429310:intron | 50.0% | |
| GCAGGCGAAGATTGTTGACA+AGG | - | tig0026478:36979-36998 | Msa1429310:intron | 50.0% | |
| AAGCAATCAGGCCAAAACGG+TGG | + | tig0026478:37605-37624 | None:intergenic | 50.0% | |
| GCCGGTCACGTTAAGACATA+AGG | + | tig0026478:37690-37709 | None:intergenic | 50.0% | |
| GATAACAACTCAGACCAGGC+CGG | - | tig0026478:37878-37897 | Msa1429310:intron | 50.0% | |
| TGAGGCTTAAAGCCCTTGCT+CGG | + | tig0026478:37921-37940 | None:intergenic | 50.0% | |
| TGCCTCTTGACATGTTGGAC+CGG | - | tig0026478:38171-38190 | Msa1429310:intron | 50.0% | |
| CATCCATACAAGGAGAGTGG+GGG | - | tig0026478:38508-38527 | Msa1429310:intron | 50.0% | |
| TAACCCCCACTCTCCTTGTA+TGG | + | tig0026478:38514-38533 | None:intergenic | 50.0% | |
| GACATGTGCTCCATTACGAG+TGG | - | tig0026478:38658-38677 | Msa1429310:intron | 50.0% | |
| AGGGGAATGAAGCGGAAATG+AGG | + | tig0026478:39851-39870 | None:intergenic | 50.0% | |
| GGTTTAGGAGGGGAATGAAG+CGG | + | tig0026478:39859-39878 | None:intergenic | 50.0% | |
| !! | ACGCTTGTTATGCCGTTGTG+CGG | + | tig0026478:39950-39969 | None:intergenic | 50.0% |
| GGACGGAATACAGGTAGTGA+AGG | + | tig0026478:40058-40077 | None:intergenic | 50.0% | |
| TTATTGGCGGCATTGTCTGG+CGG | + | tig0026478:40289-40308 | None:intergenic | 50.0% | |
| ! | GTGTTATTGGCGGCATTGTC+TGG | + | tig0026478:40292-40311 | None:intergenic | 50.0% |
| CATATTTAGGCGCTCCTGGA+CGG | + | tig0026478:40408-40427 | None:intergenic | 50.0% | |
| GTACCAAGATCAGGGGAAAC+TGG | + | tig0026478:41096-41115 | None:intergenic | 50.0% | |
| TCTGCGGCGATCAACCATTA+TGG | + | tig0026478:43179-43198 | None:intergenic | 50.0% | |
| !! | TGGAAGGTGGAGAGGCGTTA+GGG | + | tig0026478:36305-36324 | None:intergenic | 55.0% |
| !! | TTGGAAGGTGGAGAGGCGTT+AGG | + | tig0026478:36306-36325 | None:intergenic | 55.0% |
| AGGTTTGATCCTTGGGGAGC+TGG | + | tig0026478:36365-36384 | None:intergenic | 55.0% | |
| !! | CATTCTCTGGTGGTGGGATG+CGG | + | tig0026478:36389-36408 | None:intergenic | 55.0% |
| CGTTGTGCATTCTCTGGTGG+TGG | + | tig0026478:36396-36415 | None:intergenic | 55.0% | |
| ! | GAGATCGGATCAGAGAGCGT+TGG | - | tig0026478:36817-36836 | Msa1429310:intron | 55.0% |
| ! | GTTAGTCTAGCACATGGGGC+CGG | + | tig0026478:37708-37727 | None:intergenic | 55.0% |
| AAGCCCTTGCTCGGATGACT+TGG | + | tig0026478:37912-37931 | None:intergenic | 55.0% | |
| GCGCAGAAGGGCAACATGTT+AGG | + | tig0026478:38769-38788 | None:intergenic | 55.0% | |
| ! | GCTGCCTGCGTTTTATCAGC+CGG | - | tig0026478:43474-43493 | Msa1429310:CDS | 55.0% |
| !! | TGTGCCGGCTGATAAAACGC+AGG | + | tig0026478:43481-43500 | None:intergenic | 55.0% |
| ! | AGCGGTGTTGGAAGGTGGAG+AGG | + | tig0026478:36313-36332 | None:intergenic | 60.0% |
| ! | GATGGAGCGGTGTTGGAAGG+TGG | + | tig0026478:36318-36337 | None:intergenic | 60.0% |
| ACACTCGCCGCAAAAGTCGC+CGG | - | tig0026478:36427-36446 | Msa1429310:CDS | 60.0% | |
| !! | ATCCGCACCGGCGACTTTTG+CGG | + | tig0026478:36437-36456 | None:intergenic | 60.0% |
| GACAGCAACAGCATCCGCAC+CGG | + | tig0026478:36449-36468 | None:intergenic | 60.0% | |
| TCTCTGTAACGGCGTCCTGC+CGG | - | tig0026478:36724-36743 | Msa1429310:intron | 60.0% | |
| ACGGCTGATAAAACGCCGGC+AGG | + | tig0026478:36742-36761 | None:intergenic | 60.0% | |
| GGTGGATCAGTTAACGGCGC+AGG | - | tig0026478:36961-36980 | Msa1429310:intron | 60.0% | |
| ! | GGATGACTTGGCCCTTAGGC+CGG | + | tig0026478:37900-37919 | None:intergenic | 60.0% |
| ! | GCTCGGATGACTTGGCCCTT+AGG | + | tig0026478:37904-37923 | None:intergenic | 60.0% |
| AGGGCCAAGTCATCCGAGCA+AGG | - | tig0026478:37905-37924 | Msa1429310:intron | 60.0% | |
| GGGCCAAGTCATCCGAGCAA+GGG | - | tig0026478:37906-37925 | Msa1429310:intron | 60.0% | |
| GGCCGGTCCAACATGTCAAG+AGG | + | tig0026478:38176-38195 | None:intergenic | 60.0% | |
| ACCGGCCCTGACTCAGACTT+AGG | - | tig0026478:38189-38208 | Msa1429310:intron | 60.0% | |
| CCCTAAGTCTGAGTCAGGGC+CGG | + | tig0026478:38193-38212 | None:intergenic | 60.0% | |
| CCGGCCCTGACTCAGACTTA+GGG | - | tig0026478:38190-38209 | Msa1429310:intron | 60.0% | |
| ! | GGGAGGTACGGACGGAATAC+AGG | + | tig0026478:40067-40086 | None:intergenic | 60.0% |
| ! | GGCGATGGAGCGGTGTTGGA+AGG | + | tig0026478:36321-36340 | None:intergenic | 65.0% |
| TATGTTCCGGACGGCGGCGA+TGG | + | tig0026478:36336-36355 | None:intergenic | 65.0% | |
| !! | CTCTGGTGGTGGGATGCGGT+AGG | + | tig0026478:36385-36404 | None:intergenic | 65.0% |
| GTGCTCATGGCCATCGCTGC+CGG | - | tig0026478:36504-36523 | Msa1429310:CDS | 65.0% | |
| ACTCAGACCAGGCCGGCCTA+AGG | - | tig0026478:37885-37904 | Msa1429310:intron | 65.0% | |
| CTCAGACCAGGCCGGCCTAA+GGG | - | tig0026478:37886-37905 | Msa1429310:intron | 65.0% | |
| TTGGCGGCATTGTCTGGCGG+AGG | + | tig0026478:40286-40305 | None:intergenic | 65.0% | |
| AAGTAGCAGCGGCGCTCACG+AGG | + | tig0026478:40378-40397 | None:intergenic | 65.0% | |
| CGCCGCAAAAGTCGCCGGTG+CGG | - | tig0026478:36432-36451 | Msa1429310:CDS | 70.0% | |
| ACTTGGCCCTTAGGCCGGCC+TGG | + | tig0026478:37895-37914 | None:intergenic | 70.0% | |
| CGGCGGCGATGGAGCGGTGT+TGG | + | tig0026478:36325-36344 | None:intergenic | 75.0% | |
| ACCGCTCCATCGCCGCCGTC+CGG | - | tig0026478:36327-36346 | Msa1429310:CDS | 75.0% | |
| TCCGGACGGCGGCGATGGAG+CGG | + | tig0026478:36331-36350 | None:intergenic | 75.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| tig0026478 | gene | 36285 | 43508 | 36285 | ID=Msa1429310;Name=Msa1429310 |
| tig0026478 | mRNA | 36285 | 43508 | 36285 | ID=Msa1429310-mRNA-1;Parent=Msa1429310;Name=Msa1429310-mRNA-1;_AED=0.28;_eAED=0.34;_QI=0|0|0|1|0|0|8|0|485 |
| tig0026478 | exon | 43268 | 43508 | 43268 | ID=Msa1429310-mRNA-1:exon:6464;Parent=Msa1429310-mRNA-1 |
| tig0026478 | exon | 43075 | 43237 | 43075 | ID=Msa1429310-mRNA-1:exon:6463;Parent=Msa1429310-mRNA-1 |
| tig0026478 | exon | 43018 | 43069 | 43018 | ID=Msa1429310-mRNA-1:exon:6462;Parent=Msa1429310-mRNA-1 |
| tig0026478 | exon | 42786 | 43008 | 42786 | ID=Msa1429310-mRNA-1:exon:6461;Parent=Msa1429310-mRNA-1 |
| tig0026478 | exon | 39276 | 39500 | 39276 | ID=Msa1429310-mRNA-1:exon:6460;Parent=Msa1429310-mRNA-1 |
| tig0026478 | exon | 38997 | 39201 | 38997 | ID=Msa1429310-mRNA-1:exon:6459;Parent=Msa1429310-mRNA-1 |
| tig0026478 | exon | 36409 | 36637 | 36409 | ID=Msa1429310-mRNA-1:exon:6458;Parent=Msa1429310-mRNA-1 |
| tig0026478 | exon | 36285 | 36404 | 36285 | ID=Msa1429310-mRNA-1:exon:6457;Parent=Msa1429310-mRNA-1 |
| tig0026478 | CDS | 43268 | 43508 | 43268 | ID=Msa1429310-mRNA-1:cds;Parent=Msa1429310-mRNA-1 |
| tig0026478 | CDS | 43075 | 43237 | 43075 | ID=Msa1429310-mRNA-1:cds;Parent=Msa1429310-mRNA-1 |
| tig0026478 | CDS | 43018 | 43069 | 43018 | ID=Msa1429310-mRNA-1:cds;Parent=Msa1429310-mRNA-1 |
| tig0026478 | CDS | 42786 | 43008 | 42786 | ID=Msa1429310-mRNA-1:cds;Parent=Msa1429310-mRNA-1 |
| tig0026478 | CDS | 39276 | 39500 | 39276 | ID=Msa1429310-mRNA-1:cds;Parent=Msa1429310-mRNA-1 |
| tig0026478 | CDS | 38997 | 39201 | 38997 | ID=Msa1429310-mRNA-1:cds;Parent=Msa1429310-mRNA-1 |
| tig0026478 | CDS | 36409 | 36637 | 36409 | ID=Msa1429310-mRNA-1:cds;Parent=Msa1429310-mRNA-1 |
| tig0026478 | CDS | 36285 | 36404 | 36285 | ID=Msa1429310-mRNA-1:cds;Parent=Msa1429310-mRNA-1 |
| Gene Sequence |
| Protein sequence |
