Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1432830 | XP_003597390.1 | 98.324 | 358 | 3 | 1 | 1 | 358 | 1 | 355 | 0.0 | 713 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1432830 | sp|Q940T5|RDUF2_ARATH | 51.792 | 307 | 123 | 6 | 12 | 304 | 16 | 311 | 4.34e-92 | 284 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1432830 | Q2HS43 | 98.324 | 358 | 3 | 1 | 1 | 358 | 1 | 355 | 0.0 | 713 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0097340 | Msa1432830 | 0.822519 | 2.268832e-53 | -8.615850e-47 |
| Msa1375420 | Msa1432830 | 0.872008 | 4.423426e-67 | -8.615850e-47 |
| Msa1414810 | Msa1432830 | 0.821589 | 3.725294e-53 | -8.615850e-47 |
| Msa1429310 | Msa1432830 | 0.805384 | 1.370344e-49 | -8.615850e-47 |
| Msa0638650 | Msa1432830 | 0.852314 | 5.008809e-61 | -8.615850e-47 |
| Msa0654420 | Msa1432830 | 0.811607 | 6.434389e-51 | -8.615850e-47 |
| Msa0654480 | Msa1432830 | 0.808918 | 2.445988e-50 | -8.615850e-47 |
| Msa0697350 | Msa1432830 | 0.845000 | 5.334775e-59 | -8.615850e-47 |
| Msa0789780 | Msa1432830 | 0.807286 | 5.442712e-50 | -8.615850e-47 |
| Msa0146050 | Msa1432830 | 0.825956 | 3.533255e-54 | -8.615850e-47 |
| Msa0192470 | Msa1432830 | 0.825574 | 4.352294e-54 | -8.615850e-47 |
| Msa1306520 | Msa1432830 | 0.871585 | 6.111923e-67 | -8.615850e-47 |
| Msa1337450 | Msa1432830 | 0.822178 | 2.721336e-53 | -8.615850e-47 |
| Msa0390160 | Msa1432830 | 0.815441 | 9.230293e-52 | -8.615850e-47 |
| Msa0390170 | Msa1432830 | 0.806187 | 9.290435e-50 | -8.615850e-47 |
| Msa0419770 | Msa1432830 | 0.802002 | 6.897468e-49 | -8.615850e-47 |
| Msa0450100 | Msa1432830 | 0.801162 | 1.025509e-48 | -8.615850e-47 |
| Msa0246890 | Msa1432830 | 0.823485 | 1.350787e-53 | -8.615850e-47 |
| Msa0272840 | Msa1432830 | 0.832119 | 1.133485e-55 | -8.615850e-47 |
| Msa1200270 | Msa1432830 | 0.840979 | 6.272731e-58 | -8.615850e-47 |
| Msa1200290 | Msa1432830 | 0.832238 | 1.059179e-55 | -8.615850e-47 |
| Msa1221290 | Msa1432830 | 0.810573 | 1.078073e-50 | -8.615850e-47 |
| Msa0559660 | Msa1432830 | 0.808327 | 3.270552e-50 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1432830 | MtrunA17_Chr2g0328531 | 98.324 | 358 | 3 | 1 | 1 | 358 | 1 | 355 | 0.0 | 713 |
| Msa1432830 | MtrunA17_Chr4g0031931 | 64.266 | 361 | 106 | 8 | 1 | 351 | 1 | 348 | 6.71e-150 | 427 |
| Msa1432830 | MtrunA17_Chr3g0112071 | 51.163 | 344 | 129 | 5 | 9 | 317 | 2 | 341 | 1.14e-111 | 331 |
| Msa1432830 | MtrunA17_Chr5g0435561 | 44.186 | 344 | 157 | 9 | 12 | 330 | 2 | 335 | 2.89e-83 | 258 |
| Msa1432830 | MtrunA17_Chr1g0211891 | 32.184 | 261 | 146 | 8 | 14 | 258 | 13 | 258 | 4.47e-40 | 144 |
| Msa1432830 | MtrunA17_Chr5g0441191 | 34.601 | 263 | 119 | 9 | 9 | 237 | 2 | 245 | 1.65e-38 | 140 |
| Msa1432830 | MtrunA17_Chr3g0093621 | 35.656 | 244 | 131 | 8 | 9 | 237 | 3 | 235 | 1.10e-35 | 131 |
| Msa1432830 | MtrunA17_Chr1g0171791 | 32.035 | 231 | 125 | 6 | 9 | 237 | 4 | 204 | 3.60e-33 | 124 |
| Msa1432830 | MtrunA17_Chr6g0481701 | 46.903 | 113 | 56 | 2 | 135 | 246 | 180 | 289 | 1.44e-31 | 122 |
| Msa1432830 | MtrunA17_Chr3g0114781 | 28.968 | 252 | 146 | 4 | 14 | 237 | 20 | 266 | 1.93e-30 | 118 |
| Msa1432830 | MtrunA17_Chr3g0121201 | 42.520 | 127 | 61 | 3 | 135 | 257 | 188 | 306 | 2.94e-28 | 113 |
| Msa1432830 | MtrunA17_Chr1g0212081 | 50.000 | 102 | 45 | 3 | 145 | 245 | 221 | 317 | 2.81e-26 | 107 |
| Msa1432830 | MtrunA17_Chr6g0461611 | 41.026 | 117 | 63 | 3 | 124 | 240 | 174 | 284 | 4.85e-25 | 103 |
| Msa1432830 | MtrunA17_Chr2g0278071 | 43.519 | 108 | 59 | 1 | 149 | 254 | 215 | 322 | 1.44e-23 | 100 |
| Msa1432830 | MtrunA17_Chr7g0245341 | 43.564 | 101 | 53 | 2 | 145 | 244 | 300 | 397 | 7.98e-23 | 99.4 |
| Msa1432830 | MtrunA17_Chr4g0061811 | 38.739 | 111 | 64 | 3 | 137 | 246 | 307 | 414 | 9.78e-23 | 98.6 |
| Msa1432830 | MtrunA17_Chr6g0456041 | 46.809 | 94 | 49 | 1 | 152 | 244 | 233 | 326 | 4.59e-20 | 90.1 |
| Msa1432830 | MtrunA17_Chr3g0124731 | 42.857 | 84 | 46 | 1 | 155 | 238 | 154 | 235 | 4.94e-20 | 87.8 |
| Msa1432830 | MtrunA17_Chr1g0150571 | 36.893 | 103 | 62 | 1 | 146 | 245 | 184 | 286 | 1.86e-19 | 87.8 |
| Msa1432830 | MtrunA17_Chr5g0417501 | 34.821 | 112 | 65 | 2 | 129 | 240 | 60 | 163 | 3.19e-17 | 79.7 |
| Msa1432830 | MtrunA17_Chr1g0181921 | 45.833 | 72 | 35 | 1 | 168 | 239 | 189 | 256 | 5.53e-16 | 77.4 |
| Msa1432830 | MtrunA17_Chr2g0308971 | 61.905 | 42 | 16 | 0 | 192 | 233 | 109 | 150 | 1.27e-14 | 72.4 |
| Msa1432830 | MtrunA17_Chr3g0089261 | 41.667 | 72 | 34 | 2 | 167 | 238 | 279 | 342 | 8.23e-13 | 68.6 |
| Msa1432830 | MtrunA17_Chr5g0406031 | 29.375 | 160 | 93 | 5 | 97 | 236 | 75 | 234 | 3.51e-12 | 65.5 |
| Msa1432830 | MtrunA17_Chr3g0086801 | 35.938 | 64 | 41 | 0 | 170 | 233 | 83 | 146 | 3.66e-12 | 63.9 |
| Msa1432830 | MtrunA17_Chr4g0041541 | 44.444 | 54 | 30 | 0 | 180 | 233 | 173 | 226 | 1.50e-11 | 64.3 |
| Msa1432830 | MtrunA17_Chr5g0424081 | 36.364 | 88 | 40 | 3 | 179 | 258 | 210 | 289 | 1.81e-11 | 64.7 |
| Msa1432830 | MtrunA17_Chr6g0468651 | 30.769 | 104 | 49 | 4 | 151 | 236 | 12 | 110 | 8.38e-11 | 58.9 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1432830 | AT5G59550.1 | 51.792 | 307 | 123 | 6 | 12 | 304 | 16 | 311 | 4.41e-93 | 284 |
| Msa1432830 | AT5G59550.2 | 51.961 | 306 | 122 | 6 | 13 | 304 | 122 | 416 | 2.86e-92 | 285 |
| Msa1432830 | AT3G46620.1 | 52.459 | 305 | 122 | 8 | 13 | 304 | 30 | 324 | 3.36e-92 | 281 |
| Msa1432830 | AT2G39720.1 | 44.985 | 329 | 116 | 10 | 10 | 293 | 2 | 310 | 1.39e-83 | 259 |
| Msa1432830 | AT2G39720.2 | 44.985 | 329 | 116 | 10 | 10 | 293 | 2 | 310 | 1.39e-83 | 259 |
| Msa1432830 | AT1G55530.1 | 27.719 | 285 | 142 | 7 | 11 | 245 | 6 | 276 | 2.22e-36 | 135 |
| Msa1432830 | AT1G55530.2 | 27.719 | 285 | 142 | 7 | 11 | 245 | 6 | 276 | 2.22e-36 | 135 |
| Msa1432830 | AT3G19950.1 | 29.371 | 286 | 135 | 8 | 3 | 246 | 10 | 270 | 1.35e-35 | 132 |
| Msa1432830 | AT3G56580.3 | 34.836 | 244 | 121 | 7 | 13 | 237 | 7 | 231 | 1.71e-35 | 132 |
| Msa1432830 | AT3G56580.1 | 34.836 | 244 | 121 | 7 | 13 | 237 | 7 | 231 | 1.71e-35 | 132 |
| Msa1432830 | AT3G56580.2 | 34.836 | 244 | 121 | 7 | 13 | 237 | 7 | 231 | 1.71e-35 | 132 |
| Msa1432830 | AT2G40830.1 | 34.387 | 253 | 140 | 7 | 9 | 246 | 3 | 244 | 2.79e-35 | 132 |
| Msa1432830 | AT2G40830.3 | 34.387 | 253 | 140 | 7 | 9 | 246 | 3 | 244 | 2.79e-35 | 132 |
| Msa1432830 | AT2G40830.4 | 34.387 | 253 | 140 | 7 | 9 | 246 | 3 | 244 | 2.79e-35 | 132 |
| Msa1432830 | AT2G40830.2 | 34.387 | 253 | 140 | 7 | 9 | 246 | 3 | 244 | 2.79e-35 | 132 |
| Msa1432830 | AT3G19950.2 | 29.371 | 286 | 135 | 8 | 3 | 246 | 68 | 328 | 3.05e-35 | 133 |
| Msa1432830 | AT3G19950.3 | 29.371 | 286 | 135 | 8 | 3 | 246 | 68 | 328 | 3.05e-35 | 133 |
| Msa1432830 | AT1G55530.3 | 30.303 | 264 | 129 | 7 | 11 | 245 | 6 | 243 | 1.05e-34 | 130 |
| Msa1432830 | AT3G13430.4 | 30.182 | 275 | 140 | 9 | 9 | 238 | 4 | 271 | 5.37e-32 | 122 |
| Msa1432830 | AT3G13430.3 | 30.182 | 275 | 140 | 9 | 9 | 238 | 4 | 271 | 5.37e-32 | 122 |
| Msa1432830 | AT3G13430.1 | 30.182 | 275 | 140 | 9 | 9 | 238 | 4 | 271 | 5.37e-32 | 122 |
| Msa1432830 | AT3G13430.2 | 30.182 | 275 | 140 | 9 | 9 | 238 | 4 | 271 | 5.37e-32 | 122 |
| Msa1432830 | AT3G10815.1 | 58.974 | 78 | 32 | 0 | 166 | 243 | 95 | 172 | 3.70e-28 | 109 |
| Msa1432830 | AT5G01980.1 | 42.735 | 117 | 64 | 1 | 128 | 244 | 289 | 402 | 4.71e-26 | 108 |
| Msa1432830 | AT5G08139.1 | 43.689 | 103 | 54 | 2 | 145 | 246 | 264 | 363 | 8.72e-26 | 107 |
| Msa1432830 | AT5G56340.1 | 44.231 | 104 | 50 | 2 | 135 | 238 | 210 | 305 | 1.71e-24 | 103 |
| Msa1432830 | AT1G60360.1 | 42.453 | 106 | 55 | 2 | 142 | 246 | 178 | 278 | 2.24e-24 | 102 |
| Msa1432830 | AT5G15820.1 | 44.681 | 94 | 51 | 1 | 154 | 246 | 252 | 345 | 5.20e-24 | 101 |
| Msa1432830 | AT3G02340.1 | 36.620 | 142 | 79 | 2 | 120 | 250 | 252 | 393 | 2.49e-23 | 100 |
| Msa1432830 | AT3G02340.2 | 36.620 | 142 | 79 | 2 | 120 | 250 | 252 | 393 | 2.49e-23 | 100 |
| Msa1432830 | AT4G26400.2 | 40.952 | 105 | 54 | 2 | 135 | 239 | 192 | 288 | 1.05e-22 | 98.2 |
| Msa1432830 | AT4G26400.1 | 40.952 | 105 | 54 | 2 | 135 | 239 | 192 | 288 | 1.05e-22 | 98.2 |
| Msa1432830 | AT5G64920.1 | 44.231 | 104 | 57 | 1 | 142 | 244 | 206 | 309 | 1.42e-22 | 97.4 |
| Msa1432830 | AT1G68180.1 | 53.521 | 71 | 33 | 0 | 166 | 236 | 112 | 182 | 2.98e-22 | 94.4 |
| Msa1432830 | AT3G60080.1 | 55.405 | 74 | 25 | 1 | 173 | 238 | 142 | 215 | 1.90e-21 | 93.6 |
| Msa1432830 | AT5G60820.1 | 44.211 | 95 | 45 | 3 | 150 | 239 | 328 | 419 | 3.28e-20 | 91.7 |
| Msa1432830 | AT5G20910.1 | 35.398 | 113 | 64 | 3 | 136 | 245 | 177 | 283 | 3.33e-20 | 90.1 |
| Msa1432830 | AT2G44330.1 | 42.157 | 102 | 45 | 2 | 173 | 260 | 71 | 172 | 3.38e-19 | 84.7 |
| Msa1432830 | AT1G26800.1 | 40.541 | 111 | 57 | 3 | 129 | 239 | 59 | 160 | 9.30e-18 | 81.3 |
| Msa1432830 | AT1G14200.1 | 29.448 | 163 | 85 | 3 | 75 | 237 | 22 | 154 | 2.72e-15 | 73.6 |
| Msa1432830 | AT5G02750.1 | 50.000 | 56 | 28 | 0 | 189 | 244 | 211 | 266 | 7.87e-15 | 74.3 |
| Msa1432830 | AT3G30460.1 | 43.478 | 69 | 35 | 2 | 174 | 238 | 77 | 145 | 4.41e-13 | 66.6 |
| Msa1432830 | AT3G30460.2 | 43.662 | 71 | 36 | 2 | 172 | 238 | 111 | 181 | 6.30e-13 | 67.0 |
| Msa1432830 | AT4G12190.1 | 39.062 | 64 | 35 | 2 | 176 | 236 | 7 | 69 | 9.42e-11 | 57.8 |
| Msa1432830 | AT3G55530.1 | 34.211 | 76 | 50 | 0 | 158 | 233 | 177 | 252 | 9.58e-11 | 62.4 |
Find 94 sgRNAs with CRISPR-Local
Find 216 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| GCAAACTGCACAGTGAATTT+CGG | 0.334109 | tig0027183:-7569 | None:intergenic |
| AAGCGGTTGGATTGACGATA+TGG | 0.341428 | tig0027183:+7767 | Msa1432830:CDS |
| GCGTCTGAGAGTAGAATTTC+CGG | 0.352120 | tig0027183:+7730 | Msa1432830:CDS |
| ACCGCCGCCGGCGTCTGCAC+CGG | 0.356131 | tig0027183:-7299 | None:intergenic |
| GAGGACAAACGACGTTGTTT+TGG | 0.359117 | tig0027183:-7087 | None:intergenic |
| CATCCTCAACGACGTCGTTT+TGG | 0.362996 | tig0027183:+7029 | Msa1432830:CDS |
| AGAACGATTACAGGATTAAA+AGG | 0.369503 | tig0027183:-7244 | None:intergenic |
| GCCGGCGTCTGCACCGGCAC+CGG | 0.370020 | tig0027183:-7293 | None:intergenic |
| CAAGAAGAAGAAGCAGAACT+TGG | 0.386359 | tig0027183:+8046 | Msa1432830:CDS |
| TCTCTTCGACGAATCCGTTT+TGG | 0.397147 | tig0027183:-7114 | None:intergenic |
| CCGGCGGTGGTGTCTTCTCT+AGG | 0.412632 | tig0027183:-7274 | None:intergenic |
| GCCGGTGCAGACGCCGGCGG+CGG | 0.414591 | tig0027183:+7298 | Msa1432830:CDS |
| TCGGAGCTATTACTCGGTTC+CGG | 0.420389 | tig0027183:+7415 | Msa1432830:CDS |
| TTAGAGAGAGACGTGGAATT+CGG | 0.425154 | tig0027183:+7941 | Msa1432830:CDS |
| TACTCGGTTCCGGCTTCGAT+CGG | 0.428438 | tig0027183:+7425 | Msa1432830:CDS |
| GTCTGCACCGGCACCGGCGG+TGG | 0.429367 | tig0027183:-7287 | None:intergenic |
| TTCGGATTCGATTTCTGAAT+CGG | 0.431784 | tig0027183:-7551 | None:intergenic |
| GCAGACGCCGGCGGCGGTAG+CGG | 0.432430 | tig0027183:+7304 | Msa1432830:CDS |
| GGTCCACGGAGAACGATTAC+AGG | 0.435957 | tig0027183:-7253 | None:intergenic |
| TCTATCGCCGCCTTTGACGC+CGG | 0.437391 | tig0027183:-7505 | None:intergenic |
| CAAATCGAAATCAACGGTTT+CGG | 0.449596 | tig0027183:+7466 | Msa1432830:CDS |
| CTCTAACAACCGATCGAAGC+CGG | 0.463112 | tig0027183:-7434 | None:intergenic |
| ATTGACGATATGGAGGTTAC+CGG | 0.464101 | tig0027183:+7777 | Msa1432830:CDS |
| GTTTGTCCTCACTGCCAAAA+CGG | 0.475086 | tig0027183:+7100 | Msa1432830:CDS |
| TAGAAGAATTTCTTTGACTG+TGG | 0.477614 | tig0027183:+7906 | Msa1432830:CDS |
| TTCGCCGGTGGTCGGAGAGC+CGG | 0.489916 | tig0027183:+7823 | Msa1432830:CDS |
| GCCGGTGCCGGTGCAGACGC+CGG | 0.490347 | tig0027183:+7292 | Msa1432830:CDS |
| TCCGACATGCTTGGTGGAAG+TGG | 0.494594 | tig0027183:-7397 | None:intergenic |
| AGAAACCGCCGGTGATTGAC+CGG | 0.496031 | tig0027183:-7143 | None:intergenic |
| CGCTTCTTCATCAATCTGAC+CGG | 0.496970 | tig0027183:-7749 | None:intergenic |
| ATCAACACCGCTACCGCCGC+CGG | 0.500661 | tig0027183:-7311 | None:intergenic |
| AAAAGGCGAACGGCTGCCGC+CGG | 0.509087 | tig0027183:-7227 | None:intergenic |
| TCCATCTCCGTGTAAACAAT+CGG | 0.509848 | tig0027183:-7859 | None:intergenic |
| TTCAATGCGAAATTCGTGTC+CGG | 0.510386 | tig0027183:+7675 | Msa1432830:CDS |
| ACCGATTGTTTACACGGAGA+TGG | 0.520025 | tig0027183:+7858 | Msa1432830:CDS |
| GGTGCCGGTGCAGACGCCGG+CGG | 0.520180 | tig0027183:+7295 | Msa1432830:CDS |
| GGAGAATCCACCGGCGTCAA+AGG | 0.524083 | tig0027183:+7495 | Msa1432830:CDS |
| CAGATTGATGAAGAAGCGGT+TGG | 0.524412 | tig0027183:+7754 | Msa1432830:CDS |
| CCGGGAGGTGGATTTGCTGT+TGG | 0.525108 | tig0027183:+7796 | Msa1432830:CDS |
| TTGGAAGATTCGCCGGTGGT+CGG | 0.527536 | tig0027183:+7815 | Msa1432830:CDS |
| GAAGACACCACCGCCGGTGC+CGG | 0.529621 | tig0027183:+7280 | Msa1432830:CDS |
| ATATGGAGGTTACCGGGAGG+TGG | 0.532142 | tig0027183:+7784 | Msa1432830:CDS |
| ATTCCGATTGCATTCTCCCA+TGG | 0.535454 | tig0027183:+7650 | Msa1432830:CDS |
| ATCGCCGCCTTTGACGCCGG+TGG | 0.538439 | tig0027183:-7502 | None:intergenic |
| TGCAAAGAACAATTCGAGCT+AGG | 0.538605 | tig0027183:+7589 | Msa1432830:CDS |
| AAGCCATGGGAGAATGCAAT+CGG | 0.539317 | tig0027183:-7653 | None:intergenic |
| GGCGTCTGCACCGGCACCGG+CGG | 0.539489 | tig0027183:-7290 | None:intergenic |
| AATAGCTCCGACATGCTTGG+TGG | 0.540581 | tig0027183:-7403 | None:intergenic |
| TGGTGGAAGTGGACGTAGAT+CGG | 0.541171 | tig0027183:-7386 | None:intergenic |
| AGAAGAATTTCTTTGACTGT+GGG | 0.543294 | tig0027183:+7907 | Msa1432830:CDS |
| GATTCACGCCGGTCAATCAC+CGG | 0.546800 | tig0027183:+7135 | Msa1432830:CDS |
| GCGGGAGGTTTGTCTTCTGG+AGG | 0.550711 | tig0027183:-7188 | None:intergenic |
| GAATCGGTGATTTCAACTGT+TGG | 0.552700 | tig0027183:-7535 | None:intergenic |
| TCAGTTACCGATTGTTTACA+CGG | 0.553870 | tig0027183:+7852 | Msa1432830:CDS |
| AGTAATAGCTCCGACATGCT+TGG | 0.555247 | tig0027183:-7406 | None:intergenic |
| GAATTTCGCATTGAAAGCCA+TGG | 0.556326 | tig0027183:-7667 | None:intergenic |
| CGGTCAGATTGATGAAGAAG+CGG | 0.556476 | tig0027183:+7750 | Msa1432830:CDS |
| GAAATTCGTGTCCGGTGTGT+CGG | 0.561109 | tig0027183:+7683 | Msa1432830:CDS |
| CGGCGTTACGACGTCTGCGG+CGG | 0.562313 | tig0027183:-7207 | None:intergenic |
| TTCTCTCAAATCGAAATCAA+CGG | 0.566290 | tig0027183:+7460 | Msa1432830:CDS |
| GCACCAAAACGACGTCGTTG+AGG | 0.569778 | tig0027183:-7032 | None:intergenic |
| AATCAACGGTTTCGGAAGGT+CGG | 0.570591 | tig0027183:+7474 | Msa1432830:CDS |
| CGGAAGGTCGGAGAATCCAC+CGG | 0.582211 | tig0027183:+7486 | Msa1432830:CDS |
| CAAAACGACGTCGTTGAGGA+TGG | 0.582320 | tig0027183:-7028 | None:intergenic |
| TGGTGTCTTCTCTAGGTCCA+CGG | 0.584451 | tig0027183:-7267 | None:intergenic |
| CGGTAGCGGTGTTGATAGCG+AGG | 0.586301 | tig0027183:+7318 | Msa1432830:CDS |
| TTTGCTGTTGGAAGATTCGC+CGG | 0.595189 | tig0027183:+7808 | Msa1432830:CDS |
| ATTGTTTACACGGAGATGGA+TGG | 0.596456 | tig0027183:+7862 | Msa1432830:CDS |
| AAGAAGAAGAAGCAGAACTT+GGG | 0.600997 | tig0027183:+8047 | Msa1432830:CDS |
| TTGACGATATGGAGGTTACC+GGG | 0.603171 | tig0027183:+7778 | Msa1432830:CDS |
| TCGAAATCAACGGTTTCGGA+AGG | 0.605406 | tig0027183:+7470 | Msa1432830:CDS |
| CCAACAGCAAATCCACCTCC+CGG | 0.611076 | tig0027183:-7796 | None:intergenic |
| AATTTCGCATTGAAAGCCAT+GGG | 0.617522 | tig0027183:-7666 | None:intergenic |
| GTTACGACGTCTGCGGCGGG+AGG | 0.618296 | tig0027183:-7203 | None:intergenic |
| CTCACCGGCTCTCCGACCAC+CGG | 0.618605 | tig0027183:-7827 | None:intergenic |
| GAATCCACCGGCGTCAAAGG+CGG | 0.619728 | tig0027183:+7498 | Msa1432830:CDS |
| AGCATGTCGGAGCTATTACT+CGG | 0.620643 | tig0027183:+7409 | Msa1432830:CDS |
| AATCGGTAACTGAATCTCAC+CGG | 0.623794 | tig0027183:-7842 | None:intergenic |
| ATGGGAGAATGCAATCGGAA+TGG | 0.625343 | tig0027183:-7648 | None:intergenic |
| CCTAGAGAAGACACCACCGC+CGG | 0.626450 | tig0027183:+7274 | Msa1432830:CDS |
| AATAGAGTTAGAGAGAGACG+TGG | 0.627523 | tig0027183:+7934 | Msa1432830:CDS |
| CGGTTGGATTGACGATATGG+AGG | 0.630916 | tig0027183:+7770 | Msa1432830:CDS |
| GGTAGCGGTGTTGATAGCGA+GGG | 0.633690 | tig0027183:+7319 | Msa1432830:CDS |
| GGTAACTCGTGCCGACACAC+CGG | 0.638241 | tig0027183:-7694 | None:intergenic |
| TCCACTTCCACCAAGCATGT+CGG | 0.655861 | tig0027183:+7396 | Msa1432830:CDS |
| AATCCTGTAATCGTTCTCCG+TGG | 0.656883 | tig0027183:+7250 | Msa1432830:CDS |
| GAATGGTAAAGATGATTACA+CGG | 0.678082 | tig0027183:-7631 | None:intergenic |
| GTAGCGGTGTTGATAGCGAG+GGG | 0.678382 | tig0027183:+7320 | Msa1432830:CDS |
| TTATACTATGAAGACAGTAA+CGG | 0.680959 | tig0027183:+7361 | Msa1432830:CDS |
| TTACAGGATTAAAAGGCGAA+CGG | 0.681942 | tig0027183:-7237 | None:intergenic |
| GCTGTTGGAAGATTCGCCGG+TGG | 0.685393 | tig0027183:+7811 | Msa1432830:CDS |
| TCTGGAGGACTGAATACCGT+CGG | 0.709231 | tig0027183:-7173 | None:intergenic |
| TTCGTCGAAGAGATTCACGC+CGG | 0.729026 | tig0027183:+7124 | Msa1432830:CDS |
| ACGATATGGAGGTTACCGGG+AGG | 0.773215 | tig0027183:+7781 | Msa1432830:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | GAAATTTTTTATCGTTTTTT+GGG | + | tig0027183:7974-7993 | Msa1432830:CDS | 15.0% |
| !!! | GAAATTTTTTATCGTTTTTT+GGG | + | tig0027183:7974-7993 | Msa1432830:CDS | 15.0% |
| !!! | CGAAATTTTTTATCGTTTTT+TGG | + | tig0027183:7973-7992 | Msa1432830:CDS | 20.0% |
| !!! | CGAAATTTTTTATCGTTTTT+TGG | + | tig0027183:7973-7992 | Msa1432830:CDS | 20.0% |
| ! | TTATACTATGAAGACAGTAA+CGG | + | tig0027183:7361-7380 | Msa1432830:CDS | 25.0% |
| ! | TTATACTATGAAGACAGTAA+CGG | + | tig0027183:7361-7380 | Msa1432830:CDS | 25.0% |
| AGAACGATTACAGGATTAAA+AGG | - | tig0027183:7247-7266 | None:intergenic | 30.0% | |
| TTCTCTCAAATCGAAATCAA+CGG | + | tig0027183:7460-7479 | Msa1432830:CDS | 30.0% | |
| GAATGGTAAAGATGATTACA+CGG | - | tig0027183:7634-7653 | None:intergenic | 30.0% | |
| TAGAAGAATTTCTTTGACTG+TGG | + | tig0027183:7906-7925 | Msa1432830:CDS | 30.0% | |
| AGAAGAATTTCTTTGACTGT+GGG | + | tig0027183:7907-7926 | Msa1432830:CDS | 30.0% | |
| ! | AACTTAAATCGTAGCTTTTC+TGG | + | tig0027183:8003-8022 | Msa1432830:CDS | 30.0% |
| AGAACGATTACAGGATTAAA+AGG | - | tig0027183:7247-7266 | None:intergenic | 30.0% | |
| TTCTCTCAAATCGAAATCAA+CGG | + | tig0027183:7460-7479 | Msa1432830:CDS | 30.0% | |
| GAATGGTAAAGATGATTACA+CGG | - | tig0027183:7634-7653 | None:intergenic | 30.0% | |
| TAGAAGAATTTCTTTGACTG+TGG | + | tig0027183:7906-7925 | Msa1432830:CDS | 30.0% | |
| AGAAGAATTTCTTTGACTGT+GGG | + | tig0027183:7907-7926 | Msa1432830:CDS | 30.0% | |
| ! | AACTTAAATCGTAGCTTTTC+TGG | + | tig0027183:8003-8022 | Msa1432830:CDS | 30.0% |
| TTACAGGATTAAAAGGCGAA+CGG | - | tig0027183:7240-7259 | None:intergenic | 35.0% | |
| CAAATCGAAATCAACGGTTT+CGG | + | tig0027183:7466-7485 | Msa1432830:CDS | 35.0% | |
| TTCGGATTCGATTTCTGAAT+CGG | - | tig0027183:7554-7573 | None:intergenic | 35.0% | |
| AATTTCGCATTGAAAGCCAT+GGG | - | tig0027183:7669-7688 | None:intergenic | 35.0% | |
| ! | TCAGTTACCGATTGTTTACA+CGG | + | tig0027183:7852-7871 | Msa1432830:CDS | 35.0% |
| AAGAAGAAGAAGCAGAACTT+GGG | + | tig0027183:8047-8066 | Msa1432830:CDS | 35.0% | |
| TTACAGGATTAAAAGGCGAA+CGG | - | tig0027183:7240-7259 | None:intergenic | 35.0% | |
| CAAATCGAAATCAACGGTTT+CGG | + | tig0027183:7466-7485 | Msa1432830:CDS | 35.0% | |
| TTCGGATTCGATTTCTGAAT+CGG | - | tig0027183:7554-7573 | None:intergenic | 35.0% | |
| AATTTCGCATTGAAAGCCAT+GGG | - | tig0027183:7669-7688 | None:intergenic | 35.0% | |
| ! | TCAGTTACCGATTGTTTACA+CGG | + | tig0027183:7852-7871 | Msa1432830:CDS | 35.0% |
| AAGAAGAAGAAGCAGAACTT+GGG | + | tig0027183:8047-8066 | Msa1432830:CDS | 35.0% | |
| GAATCGGTGATTTCAACTGT+TGG | - | tig0027183:7538-7557 | None:intergenic | 40.0% | |
| GCAAACTGCACAGTGAATTT+CGG | - | tig0027183:7572-7591 | None:intergenic | 40.0% | |
| TGCAAAGAACAATTCGAGCT+AGG | + | tig0027183:7589-7608 | Msa1432830:CDS | 40.0% | |
| GAATTTCGCATTGAAAGCCA+TGG | - | tig0027183:7670-7689 | None:intergenic | 40.0% | |
| TTCAATGCGAAATTCGTGTC+CGG | + | tig0027183:7675-7694 | Msa1432830:CDS | 40.0% | |
| ATTGACGATATGGAGGTTAC+CGG | + | tig0027183:7777-7796 | Msa1432830:CDS | 40.0% | |
| AATCGGTAACTGAATCTCAC+CGG | - | tig0027183:7845-7864 | None:intergenic | 40.0% | |
| TCCATCTCCGTGTAAACAAT+CGG | - | tig0027183:7862-7881 | None:intergenic | 40.0% | |
| ATTGTTTACACGGAGATGGA+TGG | + | tig0027183:7862-7881 | Msa1432830:CDS | 40.0% | |
| AATAGAGTTAGAGAGAGACG+TGG | + | tig0027183:7934-7953 | Msa1432830:CDS | 40.0% | |
| TTAGAGAGAGACGTGGAATT+CGG | + | tig0027183:7941-7960 | Msa1432830:CDS | 40.0% | |
| CAAGAAGAAGAAGCAGAACT+TGG | + | tig0027183:8046-8065 | Msa1432830:CDS | 40.0% | |
| GAATCGGTGATTTCAACTGT+TGG | - | tig0027183:7538-7557 | None:intergenic | 40.0% | |
| GCAAACTGCACAGTGAATTT+CGG | - | tig0027183:7572-7591 | None:intergenic | 40.0% | |
| TGCAAAGAACAATTCGAGCT+AGG | + | tig0027183:7589-7608 | Msa1432830:CDS | 40.0% | |
| GAATTTCGCATTGAAAGCCA+TGG | - | tig0027183:7670-7689 | None:intergenic | 40.0% | |
| TTCAATGCGAAATTCGTGTC+CGG | + | tig0027183:7675-7694 | Msa1432830:CDS | 40.0% | |
| ATTGACGATATGGAGGTTAC+CGG | + | tig0027183:7777-7796 | Msa1432830:CDS | 40.0% | |
| AATCGGTAACTGAATCTCAC+CGG | - | tig0027183:7845-7864 | None:intergenic | 40.0% | |
| TCCATCTCCGTGTAAACAAT+CGG | - | tig0027183:7862-7881 | None:intergenic | 40.0% | |
| ATTGTTTACACGGAGATGGA+TGG | + | tig0027183:7862-7881 | Msa1432830:CDS | 40.0% | |
| AATAGAGTTAGAGAGAGACG+TGG | + | tig0027183:7934-7953 | Msa1432830:CDS | 40.0% | |
| TTAGAGAGAGACGTGGAATT+CGG | + | tig0027183:7941-7960 | Msa1432830:CDS | 40.0% | |
| CAAGAAGAAGAAGCAGAACT+TGG | + | tig0027183:8046-8065 | Msa1432830:CDS | 40.0% | |
| ! | GAGGACAAACGACGTTGTTT+TGG | - | tig0027183:7090-7109 | None:intergenic | 45.0% |
| GTTTGTCCTCACTGCCAAAA+CGG | + | tig0027183:7100-7119 | Msa1432830:CDS | 45.0% | |
| ! | TCTCTTCGACGAATCCGTTT+TGG | - | tig0027183:7117-7136 | None:intergenic | 45.0% |
| AATCCTGTAATCGTTCTCCG+TGG | + | tig0027183:7250-7269 | Msa1432830:CDS | 45.0% | |
| AGTAATAGCTCCGACATGCT+TGG | - | tig0027183:7409-7428 | None:intergenic | 45.0% | |
| AGCATGTCGGAGCTATTACT+CGG | + | tig0027183:7409-7428 | Msa1432830:CDS | 45.0% | |
| TCGAAATCAACGGTTTCGGA+AGG | + | tig0027183:7470-7489 | Msa1432830:CDS | 45.0% | |
| AATCAACGGTTTCGGAAGGT+CGG | + | tig0027183:7474-7493 | Msa1432830:CDS | 45.0% | |
| ATGGGAGAATGCAATCGGAA+TGG | - | tig0027183:7651-7670 | None:intergenic | 45.0% | |
| ATTCCGATTGCATTCTCCCA+TGG | + | tig0027183:7650-7669 | Msa1432830:CDS | 45.0% | |
| AAGCCATGGGAGAATGCAAT+CGG | - | tig0027183:7656-7675 | None:intergenic | 45.0% | |
| !! | ACTCTCAGACGCGTTTTGAT+CGG | - | tig0027183:7722-7741 | None:intergenic | 45.0% |
| GCGTCTGAGAGTAGAATTTC+CGG | + | tig0027183:7730-7749 | Msa1432830:CDS | 45.0% | |
| CGCTTCTTCATCAATCTGAC+CGG | - | tig0027183:7752-7771 | None:intergenic | 45.0% | |
| CGGTCAGATTGATGAAGAAG+CGG | + | tig0027183:7750-7769 | Msa1432830:CDS | 45.0% | |
| CAGATTGATGAAGAAGCGGT+TGG | + | tig0027183:7754-7773 | Msa1432830:CDS | 45.0% | |
| AAGCGGTTGGATTGACGATA+TGG | + | tig0027183:7767-7786 | Msa1432830:CDS | 45.0% | |
| TTGACGATATGGAGGTTACC+GGG | + | tig0027183:7778-7797 | Msa1432830:CDS | 45.0% | |
| !! | TTTGCTGTTGGAAGATTCGC+CGG | + | tig0027183:7808-7827 | Msa1432830:CDS | 45.0% |
| ACCGATTGTTTACACGGAGA+TGG | + | tig0027183:7858-7877 | Msa1432830:CDS | 45.0% | |
| ! | GAGGACAAACGACGTTGTTT+TGG | - | tig0027183:7090-7109 | None:intergenic | 45.0% |
| GTTTGTCCTCACTGCCAAAA+CGG | + | tig0027183:7100-7119 | Msa1432830:CDS | 45.0% | |
| ! | TCTCTTCGACGAATCCGTTT+TGG | - | tig0027183:7117-7136 | None:intergenic | 45.0% |
| AATCCTGTAATCGTTCTCCG+TGG | + | tig0027183:7250-7269 | Msa1432830:CDS | 45.0% | |
| AGTAATAGCTCCGACATGCT+TGG | - | tig0027183:7409-7428 | None:intergenic | 45.0% | |
| AGCATGTCGGAGCTATTACT+CGG | + | tig0027183:7409-7428 | Msa1432830:CDS | 45.0% | |
| TCGAAATCAACGGTTTCGGA+AGG | + | tig0027183:7470-7489 | Msa1432830:CDS | 45.0% | |
| AATCAACGGTTTCGGAAGGT+CGG | + | tig0027183:7474-7493 | Msa1432830:CDS | 45.0% | |
| ATGGGAGAATGCAATCGGAA+TGG | - | tig0027183:7651-7670 | None:intergenic | 45.0% | |
| ATTCCGATTGCATTCTCCCA+TGG | + | tig0027183:7650-7669 | Msa1432830:CDS | 45.0% | |
| AAGCCATGGGAGAATGCAAT+CGG | - | tig0027183:7656-7675 | None:intergenic | 45.0% | |
| !! | ACTCTCAGACGCGTTTTGAT+CGG | - | tig0027183:7722-7741 | None:intergenic | 45.0% |
| GCGTCTGAGAGTAGAATTTC+CGG | + | tig0027183:7730-7749 | Msa1432830:CDS | 45.0% | |
| CGCTTCTTCATCAATCTGAC+CGG | - | tig0027183:7752-7771 | None:intergenic | 45.0% | |
| CGGTCAGATTGATGAAGAAG+CGG | + | tig0027183:7750-7769 | Msa1432830:CDS | 45.0% | |
| CAGATTGATGAAGAAGCGGT+TGG | + | tig0027183:7754-7773 | Msa1432830:CDS | 45.0% | |
| AAGCGGTTGGATTGACGATA+TGG | + | tig0027183:7767-7786 | Msa1432830:CDS | 45.0% | |
| TTGACGATATGGAGGTTACC+GGG | + | tig0027183:7778-7797 | Msa1432830:CDS | 45.0% | |
| !! | TTTGCTGTTGGAAGATTCGC+CGG | + | tig0027183:7808-7827 | Msa1432830:CDS | 45.0% |
| ACCGATTGTTTACACGGAGA+TGG | + | tig0027183:7858-7877 | Msa1432830:CDS | 45.0% | |
| CAAAACGACGTCGTTGAGGA+TGG | - | tig0027183:7031-7050 | None:intergenic | 50.0% | |
| ! | CATCCTCAACGACGTCGTTT+TGG | + | tig0027183:7029-7048 | Msa1432830:CDS | 50.0% |
| !! | ACGAATCCGTTTTGGCAGTG+AGG | - | tig0027183:7109-7128 | None:intergenic | 50.0% |
| TTCGTCGAAGAGATTCACGC+CGG | + | tig0027183:7124-7143 | Msa1432830:CDS | 50.0% | |
| TCTGGAGGACTGAATACCGT+CGG | - | tig0027183:7176-7195 | None:intergenic | 50.0% | |
| TGGTGTCTTCTCTAGGTCCA+CGG | - | tig0027183:7270-7289 | None:intergenic | 50.0% | |
| TGGTGGAAGTGGACGTAGAT+CGG | - | tig0027183:7389-7408 | None:intergenic | 50.0% | |
| TCCACTTCCACCAAGCATGT+CGG | + | tig0027183:7396-7415 | Msa1432830:CDS | 50.0% | |
| AATAGCTCCGACATGCTTGG+TGG | - | tig0027183:7406-7425 | None:intergenic | 50.0% | |
| TCGGAGCTATTACTCGGTTC+CGG | + | tig0027183:7415-7434 | Msa1432830:CDS | 50.0% | |
| CTCTAACAACCGATCGAAGC+CGG | - | tig0027183:7437-7456 | None:intergenic | 50.0% | |
| GAAATTCGTGTCCGGTGTGT+CGG | + | tig0027183:7683-7702 | Msa1432830:CDS | 50.0% | |
| !! | TCAGACGCGTTTTGATCGGA+CGG | - | tig0027183:7718-7737 | None:intergenic | 50.0% |
| CGGTTGGATTGACGATATGG+AGG | + | tig0027183:7770-7789 | Msa1432830:CDS | 50.0% | |
| CAAAACGACGTCGTTGAGGA+TGG | - | tig0027183:7031-7050 | None:intergenic | 50.0% | |
| ! | CATCCTCAACGACGTCGTTT+TGG | + | tig0027183:7029-7048 | Msa1432830:CDS | 50.0% |
| !! | ACGAATCCGTTTTGGCAGTG+AGG | - | tig0027183:7109-7128 | None:intergenic | 50.0% |
| TTCGTCGAAGAGATTCACGC+CGG | + | tig0027183:7124-7143 | Msa1432830:CDS | 50.0% | |
| TCTGGAGGACTGAATACCGT+CGG | - | tig0027183:7176-7195 | None:intergenic | 50.0% | |
| TGGTGTCTTCTCTAGGTCCA+CGG | - | tig0027183:7270-7289 | None:intergenic | 50.0% | |
| TGGTGGAAGTGGACGTAGAT+CGG | - | tig0027183:7389-7408 | None:intergenic | 50.0% | |
| TCCACTTCCACCAAGCATGT+CGG | + | tig0027183:7396-7415 | Msa1432830:CDS | 50.0% | |
| AATAGCTCCGACATGCTTGG+TGG | - | tig0027183:7406-7425 | None:intergenic | 50.0% | |
| TCGGAGCTATTACTCGGTTC+CGG | + | tig0027183:7415-7434 | Msa1432830:CDS | 50.0% | |
| CTCTAACAACCGATCGAAGC+CGG | - | tig0027183:7437-7456 | None:intergenic | 50.0% | |
| GAAATTCGTGTCCGGTGTGT+CGG | + | tig0027183:7683-7702 | Msa1432830:CDS | 50.0% | |
| !! | TCAGACGCGTTTTGATCGGA+CGG | - | tig0027183:7718-7737 | None:intergenic | 50.0% |
| CGGTTGGATTGACGATATGG+AGG | + | tig0027183:7770-7789 | Msa1432830:CDS | 50.0% | |
| GCACCAAAACGACGTCGTTG+AGG | - | tig0027183:7035-7054 | None:intergenic | 55.0% | |
| GATTCACGCCGGTCAATCAC+CGG | + | tig0027183:7135-7154 | Msa1432830:CDS | 55.0% | |
| AGAAACCGCCGGTGATTGAC+CGG | - | tig0027183:7146-7165 | None:intergenic | 55.0% | |
| TCGGCGAAAAGAGAAACCGC+CGG | - | tig0027183:7157-7176 | None:intergenic | 55.0% | |
| ! | GCGGTTTCTCTTTTCGCCGA+CGG | + | tig0027183:7157-7176 | Msa1432830:CDS | 55.0% |
| GGTCCACGGAGAACGATTAC+AGG | - | tig0027183:7256-7275 | None:intergenic | 55.0% | |
| !! | GGTAGCGGTGTTGATAGCGA+GGG | + | tig0027183:7319-7338 | Msa1432830:CDS | 55.0% |
| !! | GTAGCGGTGTTGATAGCGAG+GGG | + | tig0027183:7320-7339 | Msa1432830:CDS | 55.0% |
| ! | TCCGACATGCTTGGTGGAAG+TGG | - | tig0027183:7400-7419 | None:intergenic | 55.0% |
| TACTCGGTTCCGGCTTCGAT+CGG | + | tig0027183:7425-7444 | Msa1432830:CDS | 55.0% | |
| ACGATATGGAGGTTACCGGG+AGG | + | tig0027183:7781-7800 | Msa1432830:CDS | 55.0% | |
| ATATGGAGGTTACCGGGAGG+TGG | + | tig0027183:7784-7803 | Msa1432830:CDS | 55.0% | |
| CCAACAGCAAATCCACCTCC+CGG | - | tig0027183:7799-7818 | None:intergenic | 55.0% | |
| TTGGAAGATTCGCCGGTGGT+CGG | + | tig0027183:7815-7834 | Msa1432830:CDS | 55.0% | |
| GCACCAAAACGACGTCGTTG+AGG | - | tig0027183:7035-7054 | None:intergenic | 55.0% | |
| GATTCACGCCGGTCAATCAC+CGG | + | tig0027183:7135-7154 | Msa1432830:CDS | 55.0% | |
| AGAAACCGCCGGTGATTGAC+CGG | - | tig0027183:7146-7165 | None:intergenic | 55.0% | |
| TCGGCGAAAAGAGAAACCGC+CGG | - | tig0027183:7157-7176 | None:intergenic | 55.0% | |
| ! | GCGGTTTCTCTTTTCGCCGA+CGG | + | tig0027183:7157-7176 | Msa1432830:CDS | 55.0% |
| GGTCCACGGAGAACGATTAC+AGG | - | tig0027183:7256-7275 | None:intergenic | 55.0% | |
| !! | GGTAGCGGTGTTGATAGCGA+GGG | + | tig0027183:7319-7338 | Msa1432830:CDS | 55.0% |
| !! | GTAGCGGTGTTGATAGCGAG+GGG | + | tig0027183:7320-7339 | Msa1432830:CDS | 55.0% |
| ! | TCCGACATGCTTGGTGGAAG+TGG | - | tig0027183:7400-7419 | None:intergenic | 55.0% |
| TACTCGGTTCCGGCTTCGAT+CGG | + | tig0027183:7425-7444 | Msa1432830:CDS | 55.0% | |
| ACGATATGGAGGTTACCGGG+AGG | + | tig0027183:7781-7800 | Msa1432830:CDS | 55.0% | |
| ATATGGAGGTTACCGGGAGG+TGG | + | tig0027183:7784-7803 | Msa1432830:CDS | 55.0% | |
| CCAACAGCAAATCCACCTCC+CGG | - | tig0027183:7799-7818 | None:intergenic | 55.0% | |
| TTGGAAGATTCGCCGGTGGT+CGG | + | tig0027183:7815-7834 | Msa1432830:CDS | 55.0% | |
| GCGGGAGGTTTGTCTTCTGG+AGG | - | tig0027183:7191-7210 | None:intergenic | 60.0% | |
| CCTAGAGAAGACACCACCGC+CGG | + | tig0027183:7274-7293 | Msa1432830:CDS | 60.0% | |
| !! | CGGTAGCGGTGTTGATAGCG+AGG | + | tig0027183:7318-7337 | Msa1432830:CDS | 60.0% |
| CGGAAGGTCGGAGAATCCAC+CGG | + | tig0027183:7486-7505 | Msa1432830:CDS | 60.0% | |
| GGAGAATCCACCGGCGTCAA+AGG | + | tig0027183:7495-7514 | Msa1432830:CDS | 60.0% | |
| GAATCCACCGGCGTCAAAGG+CGG | + | tig0027183:7498-7517 | Msa1432830:CDS | 60.0% | |
| TCTATCGCCGCCTTTGACGC+CGG | - | tig0027183:7508-7527 | None:intergenic | 60.0% | |
| ! | GGTAACTCGTGCCGACACAC+CGG | - | tig0027183:7697-7716 | None:intergenic | 60.0% |
| !! | CCGGGAGGTGGATTTGCTGT+TGG | + | tig0027183:7796-7815 | Msa1432830:CDS | 60.0% |
| GCTGTTGGAAGATTCGCCGG+TGG | + | tig0027183:7811-7830 | Msa1432830:CDS | 60.0% | |
| GCGGGAGGTTTGTCTTCTGG+AGG | - | tig0027183:7191-7210 | None:intergenic | 60.0% | |
| CCTAGAGAAGACACCACCGC+CGG | + | tig0027183:7274-7293 | Msa1432830:CDS | 60.0% | |
| !! | CGGTAGCGGTGTTGATAGCG+AGG | + | tig0027183:7318-7337 | Msa1432830:CDS | 60.0% |
| CGGAAGGTCGGAGAATCCAC+CGG | + | tig0027183:7486-7505 | Msa1432830:CDS | 60.0% | |
| GGAGAATCCACCGGCGTCAA+AGG | + | tig0027183:7495-7514 | Msa1432830:CDS | 60.0% | |
| GAATCCACCGGCGTCAAAGG+CGG | + | tig0027183:7498-7517 | Msa1432830:CDS | 60.0% | |
| TCTATCGCCGCCTTTGACGC+CGG | - | tig0027183:7508-7527 | None:intergenic | 60.0% | |
| ! | GGTAACTCGTGCCGACACAC+CGG | - | tig0027183:7697-7716 | None:intergenic | 60.0% |
| !! | CCGGGAGGTGGATTTGCTGT+TGG | + | tig0027183:7796-7815 | Msa1432830:CDS | 60.0% |
| GCTGTTGGAAGATTCGCCGG+TGG | + | tig0027183:7811-7830 | Msa1432830:CDS | 60.0% | |
| TCACGCCGGTCAATCACCGG+CGG | + | tig0027183:7138-7157 | Msa1432830:CDS | 65.0% | |
| GCGGCGGGAGGTTTGTCTTC+TGG | - | tig0027183:7194-7213 | None:intergenic | 65.0% | |
| AAAAGGCGAACGGCTGCCGC+CGG | - | tig0027183:7230-7249 | None:intergenic | 65.0% | |
| CCGGCGGTGGTGTCTTCTCT+AGG | - | tig0027183:7277-7296 | None:intergenic | 65.0% | |
| ATCAACACCGCTACCGCCGC+CGG | - | tig0027183:7314-7333 | None:intergenic | 65.0% | |
| TCACGCCGGTCAATCACCGG+CGG | + | tig0027183:7138-7157 | Msa1432830:CDS | 65.0% | |
| GCGGCGGGAGGTTTGTCTTC+TGG | - | tig0027183:7194-7213 | None:intergenic | 65.0% | |
| AAAAGGCGAACGGCTGCCGC+CGG | - | tig0027183:7230-7249 | None:intergenic | 65.0% | |
| CCGGCGGTGGTGTCTTCTCT+AGG | - | tig0027183:7277-7296 | None:intergenic | 65.0% | |
| ATCAACACCGCTACCGCCGC+CGG | - | tig0027183:7314-7333 | None:intergenic | 65.0% | |
| GTTACGACGTCTGCGGCGGG+AGG | - | tig0027183:7206-7225 | None:intergenic | 70.0% | |
| GGCGTTACGACGTCTGCGGC+GGG | - | tig0027183:7209-7228 | None:intergenic | 70.0% | |
| CGGCGTTACGACGTCTGCGG+CGG | - | tig0027183:7210-7229 | None:intergenic | 70.0% | |
| CGCCGCAGACGTCGTAACGC+CGG | + | tig0027183:7208-7227 | Msa1432830:CDS | 70.0% | |
| CGCCGGCGTTACGACGTCTG+CGG | - | tig0027183:7213-7232 | None:intergenic | 70.0% | |
| CGCAGACGTCGTAACGCCGG+CGG | + | tig0027183:7211-7230 | Msa1432830:CDS | 70.0% | |
| GAAGACACCACCGCCGGTGC+CGG | + | tig0027183:7280-7299 | Msa1432830:CDS | 70.0% | |
| ATCGCCGCCTTTGACGCCGG+TGG | - | tig0027183:7505-7524 | None:intergenic | 70.0% | |
| TTCGCCGGTGGTCGGAGAGC+CGG | + | tig0027183:7823-7842 | Msa1432830:CDS | 70.0% | |
| !! | CTCACCGGCTCTCCGACCAC+CGG | - | tig0027183:7830-7849 | None:intergenic | 70.0% |
| GTTACGACGTCTGCGGCGGG+AGG | - | tig0027183:7206-7225 | None:intergenic | 70.0% | |
| GGCGTTACGACGTCTGCGGC+GGG | - | tig0027183:7209-7228 | None:intergenic | 70.0% | |
| CGGCGTTACGACGTCTGCGG+CGG | - | tig0027183:7210-7229 | None:intergenic | 70.0% | |
| CGCCGCAGACGTCGTAACGC+CGG | + | tig0027183:7208-7227 | Msa1432830:CDS | 70.0% | |
| CGCCGGCGTTACGACGTCTG+CGG | - | tig0027183:7213-7232 | None:intergenic | 70.0% | |
| CGCAGACGTCGTAACGCCGG+CGG | + | tig0027183:7211-7230 | Msa1432830:CDS | 70.0% | |
| GAAGACACCACCGCCGGTGC+CGG | + | tig0027183:7280-7299 | Msa1432830:CDS | 70.0% | |
| ATCGCCGCCTTTGACGCCGG+TGG | - | tig0027183:7505-7524 | None:intergenic | 70.0% | |
| TTCGCCGGTGGTCGGAGAGC+CGG | + | tig0027183:7823-7842 | Msa1432830:CDS | 70.0% | |
| !! | CTCACCGGCTCTCCGACCAC+CGG | - | tig0027183:7830-7849 | None:intergenic | 70.0% |
| !!! | GTCTGCACCGGCACCGGCGG+TGG | - | tig0027183:7290-7309 | None:intergenic | 80.0% |
| !! | GGCGTCTGCACCGGCACCGG+CGG | - | tig0027183:7293-7312 | None:intergenic | 80.0% |
| !!! | GCCGGTGCCGGTGCAGACGC+CGG | + | tig0027183:7292-7311 | Msa1432830:CDS | 80.0% |
| !! | GCCGGCGTCTGCACCGGCAC+CGG | - | tig0027183:7296-7315 | None:intergenic | 80.0% |
| !!! | GGTGCCGGTGCAGACGCCGG+CGG | + | tig0027183:7295-7314 | Msa1432830:CDS | 80.0% |
| ! | ACCGCCGCCGGCGTCTGCAC+CGG | - | tig0027183:7302-7321 | None:intergenic | 80.0% |
| ! | GCAGACGCCGGCGGCGGTAG+CGG | + | tig0027183:7304-7323 | Msa1432830:CDS | 80.0% |
| !!! | GTCTGCACCGGCACCGGCGG+TGG | - | tig0027183:7290-7309 | None:intergenic | 80.0% |
| !! | GGCGTCTGCACCGGCACCGG+CGG | - | tig0027183:7293-7312 | None:intergenic | 80.0% |
| !!! | GCCGGTGCCGGTGCAGACGC+CGG | + | tig0027183:7292-7311 | Msa1432830:CDS | 80.0% |
| !! | GCCGGCGTCTGCACCGGCAC+CGG | - | tig0027183:7296-7315 | None:intergenic | 80.0% |
| !!! | GGTGCCGGTGCAGACGCCGG+CGG | + | tig0027183:7295-7314 | Msa1432830:CDS | 80.0% |
| ! | ACCGCCGCCGGCGTCTGCAC+CGG | - | tig0027183:7302-7321 | None:intergenic | 80.0% |
| ! | GCAGACGCCGGCGGCGGTAG+CGG | + | tig0027183:7304-7323 | Msa1432830:CDS | 80.0% |
| ! | GCCGGTGCAGACGCCGGCGG+CGG | + | tig0027183:7298-7317 | Msa1432830:CDS | 85.0% |
| ! | GCCGGTGCAGACGCCGGCGG+CGG | + | tig0027183:7298-7317 | Msa1432830:CDS | 85.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| tig0027183 | gene | 7007 | 8083 | 7007 | ID=Msa1432830;Name=Msa1432830 |
| tig0027183 | mRNA | 7007 | 8083 | 7007 | ID=Msa1432830-mRNA-1;Parent=Msa1432830;Name=Msa1432830-mRNA-1;_AED=0.00;_eAED=0.00;_QI=0|-1|0|1|-1|1|1|0|358 |
| tig0027183 | exon | 7007 | 8083 | 7007 | ID=Msa1432830-mRNA-1:exon:8323;Parent=Msa1432830-mRNA-1 |
| tig0027183 | CDS | 7007 | 8083 | 7007 | ID=Msa1432830-mRNA-1:cds;Parent=Msa1432830-mRNA-1 |
| Gene Sequence |
| Protein sequence |
