Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0510120 | RHN56160.1 | 68.939 | 660 | 130 | 10 | 1 | 644 | 48 | 648 | 0.0 | 884 |
| Msa0510120 | RHN56160.1 | 70.000 | 660 | 124 | 9 | 1 | 644 | 357 | 958 | 0.0 | 899 |
| Msa0510120 | RHN56160.1 | 74.006 | 327 | 69 | 5 | 332 | 644 | 15 | 339 | 1.85e-154 | 480 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0510120 | sp|O82161|PHI1_TOBAC | 76.109 | 293 | 66 | 3 | 1 | 292 | 23 | 312 | 4.21e-158 | 459 |
| Msa0510120 | sp|O82161|PHI1_TOBAC | 68.810 | 311 | 85 | 4 | 346 | 644 | 3 | 313 | 1.28e-145 | 427 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0510120 | A0A5B6U7N7 | 66.238 | 311 | 89 | 4 | 350 | 644 | 9 | 319 | 1.68e-134 | 418 |
| Msa0510120 | A0A5B6U7N7 | 68.788 | 660 | 147 | 10 | 2 | 644 | 26 | 643 | 0.0 | 883 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0084870 | Msa0510120 | 0.830380 | 3.033989e-55 | -8.615850e-47 |
| Msa0207680 | Msa0510120 | 0.828114 | 1.075973e-54 | -8.615850e-47 |
| Msa0207690 | Msa0510120 | 0.813661 | 2.286417e-51 | -8.615850e-47 |
| Msa0209360 | Msa0510120 | 0.832560 | 8.815884e-56 | -8.615850e-47 |
| Msa0418300 | Msa0510120 | 0.909022 | 9.012412e-82 | -8.615850e-47 |
| Msa0419770 | Msa0510120 | 0.800724 | 1.260322e-48 | -8.615850e-47 |
| Msa0442260 | Msa0510120 | 0.807899 | 4.034701e-50 | -8.615850e-47 |
| Msa0464670 | Msa0510120 | 0.959024 | 5.477146e-117 | -8.615850e-47 |
| Msa0287640 | Msa0510120 | 0.803249 | 3.814992e-49 | -8.615850e-47 |
| Msa0333950 | Msa0510120 | 0.807942 | 3.950960e-50 | -8.615850e-47 |
| Msa0334060 | Msa0510120 | 0.802196 | 6.292194e-49 | -8.615850e-47 |
| Msa0347660 | Msa0510120 | 0.805020 | 1.633182e-49 | -8.615850e-47 |
| Msa0358010 | Msa0510120 | 0.841815 | 3.780226e-58 | -8.615850e-47 |
| Msa0510120 | Msa0581370 | 0.829784 | 4.241972e-55 | -8.615850e-47 |
| Msa0510120 | Msa0581380 | 0.839136 | 1.898219e-57 | -8.615850e-47 |
| Msa0510120 | Msa0581390 | 0.819777 | 9.719039e-53 | -8.615850e-47 |
| Msa0510120 | Msa0671230 | 0.800237 | 1.583964e-48 | -8.615850e-47 |
| Msa0510120 | Msa0684340 | 0.804016 | 2.644603e-49 | -8.615850e-47 |
| Msa0510120 | Msa0690930 | 0.802458 | 5.557220e-49 | -8.615850e-47 |
| Msa0510120 | Msa0711200 | 0.818818 | 1.606967e-52 | -8.615850e-47 |
| Msa0510120 | Msa0719740 | 0.862772 | 3.999354e-64 | -8.615850e-47 |
| Msa0510120 | Msa0802750 | 0.859049 | 5.410224e-63 | -8.615850e-47 |
| Msa0510120 | Msa0841060 | 0.842714 | 2.184295e-58 | -8.615850e-47 |
| Msa0510120 | Msa0853250 | 0.840152 | 1.032738e-57 | -8.615850e-47 |
| Msa0510120 | Msa1088160 | 0.803000 | 4.296159e-49 | -8.615850e-47 |
| Msa0510120 | Msa1221290 | 0.805400 | 1.359445e-49 | -8.615850e-47 |
| Msa0510120 | Msa1221310 | 0.827548 | 1.471939e-54 | -8.615850e-47 |
| Msa0510120 | Msa1221320 | 0.834028 | 3.798320e-56 | -8.615850e-47 |
| Msa0510120 | Msa1265290 | 0.860714 | 1.703715e-63 | -8.615850e-47 |
| Msa0510120 | Msa1315520 | 0.801260 | 9.791269e-49 | -8.615850e-47 |
| Msa0510120 | Msa1337450 | 0.843977 | 1.005022e-58 | -8.615850e-47 |
| Msa0510120 | Msa1337460 | 0.823378 | 1.430799e-53 | -8.615850e-47 |
| Msa0510120 | Msa1380270 | 0.803409 | 3.534385e-49 | -8.615850e-47 |
| Msa0510120 | Msa1429310 | 0.806566 | 7.728822e-50 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0510120 | MtrunA17_Chr5g0426441 | 70.000 | 660 | 124 | 9 | 1 | 644 | 357 | 958 | 0.0 | 899 |
| Msa0510120 | MtrunA17_Chr5g0426441 | 68.939 | 660 | 130 | 10 | 1 | 644 | 48 | 648 | 0.0 | 884 |
| Msa0510120 | MtrunA17_Chr5g0426441 | 74.006 | 327 | 69 | 5 | 332 | 644 | 15 | 339 | 1.71e-158 | 480 |
| Msa0510120 | MtrunA17_Chr3g0116001 | 97.010 | 301 | 9 | 0 | 344 | 644 | 4 | 304 | 0.0 | 603 |
| Msa0510120 | MtrunA17_Chr3g0116001 | 70.205 | 292 | 73 | 4 | 1 | 292 | 26 | 303 | 4.30e-141 | 413 |
| Msa0510120 | MtrunA17_Chr3g0115951 | 97.952 | 293 | 5 | 1 | 1 | 292 | 24 | 316 | 0.0 | 588 |
| Msa0510120 | MtrunA17_Chr3g0115951 | 66.246 | 317 | 92 | 4 | 343 | 644 | 1 | 317 | 2.08e-138 | 407 |
| Msa0510120 | MtrunA17_Chr3g0116011 | 93.662 | 284 | 18 | 0 | 361 | 644 | 21 | 304 | 0.0 | 556 |
| Msa0510120 | MtrunA17_Chr3g0116011 | 69.521 | 292 | 75 | 4 | 1 | 292 | 26 | 303 | 1.37e-139 | 409 |
| Msa0510120 | MtrunA17_Chr4g0050321 | 61.512 | 291 | 97 | 4 | 3 | 292 | 23 | 299 | 1.42e-121 | 363 |
| Msa0510120 | MtrunA17_Chr4g0050321 | 60.289 | 277 | 101 | 3 | 372 | 644 | 29 | 300 | 8.68e-113 | 340 |
| Msa0510120 | MtrunA17_Chr2g0279311 | 56.357 | 291 | 114 | 5 | 3 | 292 | 25 | 303 | 1.77e-113 | 342 |
| Msa0510120 | MtrunA17_Chr2g0279311 | 52.396 | 313 | 132 | 6 | 337 | 644 | 4 | 304 | 5.20e-110 | 333 |
| Msa0510120 | MtrunA17_Chr4g0018171 | 35.473 | 296 | 164 | 8 | 366 | 641 | 53 | 341 | 3.05e-43 | 159 |
| Msa0510120 | MtrunA17_Chr4g0018171 | 36.735 | 294 | 165 | 9 | 15 | 297 | 65 | 348 | 5.21e-40 | 150 |
| Msa0510120 | MtrunA17_Chr1g0188071 | 35.786 | 299 | 172 | 8 | 360 | 641 | 46 | 341 | 3.48e-43 | 159 |
| Msa0510120 | MtrunA17_Chr1g0188071 | 36.519 | 293 | 164 | 9 | 15 | 295 | 64 | 346 | 2.21e-40 | 150 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0510120 | AT4G08950.1 | 73.649 | 296 | 71 | 4 | 1 | 292 | 21 | 313 | 1.18e-149 | 436 |
| Msa0510120 | AT4G08950.1 | 69.565 | 299 | 76 | 6 | 361 | 644 | 16 | 314 | 3.72e-139 | 409 |
| Msa0510120 | AT1G35140.1 | 62.662 | 308 | 103 | 4 | 347 | 643 | 2 | 308 | 7.50e-133 | 392 |
| Msa0510120 | AT1G35140.1 | 67.500 | 280 | 86 | 2 | 15 | 292 | 32 | 308 | 6.73e-130 | 385 |
| Msa0510120 | AT5G64260.1 | 60.900 | 289 | 101 | 4 | 7 | 292 | 25 | 304 | 1.92e-118 | 355 |
| Msa0510120 | AT5G64260.1 | 56.129 | 310 | 121 | 6 | 345 | 644 | 1 | 305 | 3.50e-113 | 342 |
| Msa0510120 | AT5G09440.1 | 60.456 | 263 | 84 | 5 | 386 | 644 | 32 | 278 | 2.73e-99 | 305 |
| Msa0510120 | AT5G09440.1 | 57.353 | 272 | 88 | 6 | 23 | 292 | 32 | 277 | 1.24e-95 | 295 |
| Msa0510120 | AT5G51550.1 | 38.225 | 293 | 162 | 8 | 365 | 641 | 42 | 331 | 3.14e-46 | 167 |
| Msa0510120 | AT5G51550.1 | 38.908 | 293 | 156 | 9 | 15 | 295 | 55 | 336 | 5.55e-44 | 160 |
| Msa0510120 | AT3G02970.1 | 34.228 | 298 | 161 | 6 | 25 | 291 | 37 | 330 | 3.32e-46 | 167 |
| Msa0510120 | AT3G02970.1 | 30.976 | 297 | 160 | 8 | 388 | 642 | 37 | 330 | 2.73e-41 | 153 |
| Msa0510120 | AT2G35150.1 | 36.909 | 317 | 171 | 10 | 350 | 640 | 3 | 316 | 5.53e-44 | 160 |
| Msa0510120 | AT2G35150.1 | 37.931 | 290 | 156 | 11 | 15 | 289 | 36 | 316 | 4.08e-38 | 144 |
| Msa0510120 | AT2G17230.1 | 35.135 | 296 | 171 | 9 | 364 | 641 | 65 | 357 | 5.24e-41 | 153 |
| Msa0510120 | AT2G17230.1 | 35.354 | 297 | 167 | 10 | 9 | 290 | 71 | 357 | 1.77e-37 | 143 |
Find 178 sgRNAs with CRISPR-Local
Find 410 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| ATCAAGAATTTGTTTGTTTA+AGG | 0.075587 | 3_4:-58962261 | None:intergenic |
| CCCTTTCACCAACCTATTTA+TGG | 0.088479 | 3_4:+58967125 | Msa0510120:CDS |
| TCAGCTTGTCCTGGTGTTTA+TGG | 0.171889 | 3_4:+58962707 | Msa0510120:CDS |
| GCTTCAAGAGGTGCTTCTTT+GGG | 0.216799 | 3_4:-58967272 | None:intergenic |
| AGCTTCAAGAGGTGCTTCTT+TGG | 0.249821 | 3_4:-58967273 | None:intergenic |
| GTTCACCTTTGGAAGCTAAT+TGG | 0.254782 | 3_4:-58962328 | None:intergenic |
| CGTGGTTGATGGTATTTATA+GGG | 0.257725 | 3_4:-58966459 | None:intergenic |
| TTGCAAAATTTGCTTACATT+TGG | 0.273951 | 3_4:+58962468 | Msa0510120:CDS |
| GATGGTATTTATAGGGGATT+TGG | 0.275424 | 3_4:-58966452 | None:intergenic |
| ACGTGGTTGATGGTATTTAT+AGG | 0.279098 | 3_4:-58966460 | None:intergenic |
| CCCACAGGTAAGCAAATTTA+TGG | 0.282395 | 3_4:-58967061 | None:intergenic |
| TGATGGAATGGTGATAAATT+TGG | 0.283166 | 3_4:+58962601 | Msa0510120:CDS |
| TCAAGGCCCACATCGTTATT+TGG | 0.293974 | 3_4:-58967173 | None:intergenic |
| GATTAACGTGGCTAGTTTAT+TGG | 0.303246 | 3_4:+58967205 | Msa0510120:CDS |
| CTTGATGAGAATTACTCATT+AGG | 0.306480 | 3_4:+58962278 | Msa0510120:CDS |
| GAAGAGGGCCTTTGTGGTAT+TGG | 0.311173 | 3_4:-58966668 | None:intergenic |
| GCGCTTTGTGGACCGTAAAT+TGG | 0.317106 | 3_4:-58962545 | None:intergenic |
| CCATTTCACCAACCAATTTA+CGG | 0.318307 | 3_4:+58962533 | Msa0510120:CDS |
| CCTTTCACCAACCTATTTAT+GGG | 0.318942 | 3_4:+58967126 | Msa0510120:CDS |
| GTAGAGAAATGAAGAGGAAT+AGG | 0.319549 | 3_4:-58966590 | None:intergenic |
| TGCAAAATTTGCTTACATTT+GGG | 0.320080 | 3_4:+58962469 | Msa0510120:CDS |
| GGGCTTTGAGGCCCATAAAT+AGG | 0.320497 | 3_4:-58967137 | None:intergenic |
| ACACGGTTCTTCTTCTTCAA+TGG | 0.340114 | 3_4:+58962427 | Msa0510120:CDS |
| TTTGGAAATGGTTACTTTCA+AGG | 0.342445 | 3_4:+58962656 | Msa0510120:CDS |
| TTCAATGCTCATGGTGATAA+TGG | 0.347620 | 3_4:+58962791 | Msa0510120:CDS |
| ATGAAATGAAATTGAGGTTA+TGG | 0.348994 | 3_4:-58966491 | None:intergenic |
| AGTGATGAAATCGGAGATTA+TGG | 0.355272 | 3_4:-58966751 | None:intergenic |
| TCGGCTGACGTGGTAGTTGA+TGG | 0.357923 | 3_4:+58966996 | Msa0510120:CDS |
| GGCGTTTGTCTTTGAGCCCT+TGG | 0.361171 | 3_4:-58966955 | None:intergenic |
| TTGCTTGTTGATTCTACTAC+TGG | 0.362064 | 3_4:+58962761 | Msa0510120:CDS |
| GTGACGAATCCATTTGGAAA+TGG | 0.389836 | 3_4:+58967236 | Msa0510120:CDS |
| TTATAACTTGCACCGCTTGT+TGG | 0.393324 | 3_4:-58967365 | None:intergenic |
| CCGTAAATTGGTTGGTGAAA+TGG | 0.399220 | 3_4:-58962533 | None:intergenic |
| GGAATCTTTGTGTTCACCTT+TGG | 0.401182 | 3_4:-58962339 | None:intergenic |
| CGGTGAGAAGAGGGCCTTTG+TGG | 0.401444 | 3_4:-58966674 | None:intergenic |
| GGAACAGCAACAAACCCTTT+TGG | 0.401625 | 3_4:+58962638 | Msa0510120:CDS |
| AACGTGGCTAGTTTATTGGC+TGG | 0.402914 | 3_4:+58967209 | Msa0510120:CDS |
| AACAACGATGTAGGACTTGA+TGG | 0.404400 | 3_4:+58962584 | Msa0510120:CDS |
| ACCGTACCATATGAGATTGA+TGG | 0.405288 | 3_4:-58966706 | None:intergenic |
| TTCTTGCTGCTGAGCTCAAA+TGG | 0.405483 | 3_4:-58966614 | None:intergenic |
| ACCACGTAGCGACGGATGAC+TGG | 0.407945 | 3_4:-58966800 | None:intergenic |
| GGAAATTGAAGTGATGAAAT+CGG | 0.409961 | 3_4:-58966760 | None:intergenic |
| CACAACGGTCCATTACTCTA+TGG | 0.410127 | 3_4:+58962047 | Msa0510120:CDS |
| AGCACCTCTTGAAGCTGGTT+CGG | 0.414779 | 3_4:+58967280 | Msa0510120:CDS |
| AAATCTCAGTCAATTTAATC+TGG | 0.417323 | 3_4:+58962072 | Msa0510120:CDS |
| TATAACGCTAACGGCGTCAA+TGG | 0.419828 | 3_4:+58967383 | Msa0510120:CDS |
| GCAACCAATGGTGCGCTTTG+TGG | 0.422076 | 3_4:-58962557 | None:intergenic |
| GCAACTAACGGTGGGCTTTG+AGG | 0.422767 | 3_4:-58967149 | None:intergenic |
| TGAAAGTAACCATTTCCAAA+AGG | 0.429612 | 3_4:-58962653 | None:intergenic |
| AAGAGGTTCCCAGCGTAGCC+AGG | 0.432432 | 3_4:-58967335 | None:intergenic |
| TCAAGTCCTACATCGTTGTT+TGG | 0.434820 | 3_4:-58962581 | None:intergenic |
| GGGGCTTACCCTGGCTACGC+TGG | 0.436220 | 3_4:+58967326 | Msa0510120:CDS |
| GGGGTCGTGACGAATCCATT+TGG | 0.436454 | 3_4:+58967230 | Msa0510120:CDS |
| ATCGGAGATTATGGCACGTT+GGG | 0.438644 | 3_4:-58966742 | None:intergenic |
| GAAAGTAACCATTTCCAAAA+GGG | 0.440576 | 3_4:-58962652 | None:intergenic |
| GTTGAGCAAGATAATGTAGA+AGG | 0.441408 | 3_4:-58962845 | None:intergenic |
| AATAACGATGTGGGCCTTGA+CGG | 0.443160 | 3_4:+58967176 | Msa0510120:CDS |
| GCTGAAACTGAAGGTTGGTT+TGG | 0.443189 | 3_4:-58962170 | None:intergenic |
| CTGGGGTTTGATGGTGGGTG+AGG | 0.446648 | 3_4:-58966781 | None:intergenic |
| GAAGCTGGTTCGGCTTGTAC+TGG | 0.446938 | 3_4:+58967290 | Msa0510120:CDS |
| GAAGCTGCTTCAGCTTGTCC+TGG | 0.453010 | 3_4:+58962698 | Msa0510120:CDS |
| ACGTGGCTAGTTTATTGGCT+GGG | 0.455160 | 3_4:+58967210 | Msa0510120:CDS |
| CGAAGTGAGAACCACGTTGA+TGG | 0.455562 | 3_4:-58966976 | None:intergenic |
| TGTTTAAGGAAAGTGAAAGC+TGG | 0.456462 | 3_4:-58962247 | None:intergenic |
| TGACGAATCCATTTGGAAAT+GGG | 0.457201 | 3_4:+58967237 | Msa0510120:CDS |
| GACGGATGACTGGGGTTTGA+TGG | 0.457880 | 3_4:-58966790 | None:intergenic |
| AAATCTCCATCAATCTCATA+TGG | 0.458137 | 3_4:+58966700 | Msa0510120:CDS |
| ACCGTGTGTCCCACATCTAC+TGG | 0.461256 | 3_4:-58967027 | None:intergenic |
| TAGAACAAACCGAGGTTGTC+GGG | 0.463906 | 3_4:-58967436 | None:intergenic |
| CTTCAAGAGGTGCTTCTTTG+GGG | 0.475380 | 3_4:-58967271 | None:intergenic |
| CGGCTGACGTGGTAGTTGAT+GGG | 0.476749 | 3_4:+58966997 | Msa0510120:CDS |
| TCGGCTTGTACTGGAGAGTT+CGG | 0.477162 | 3_4:+58967299 | Msa0510120:CDS |
| AAAGAAAATGCAAGGAAAGT+AGG | 0.480650 | 3_4:-58966421 | None:intergenic |
| TGGCTACGCTGGGAACCTCT+TGG | 0.482318 | 3_4:+58967337 | Msa0510120:CDS |
| CGCTACGTGGTGGAAATTAA+CGG | 0.486698 | 3_4:+58966812 | Msa0510120:CDS |
| AAGGGCCATGCGCATTGACC+TGG | 0.488704 | 3_4:-58967107 | None:intergenic |
| TGATAGTACCCATTTCCAAA+TGG | 0.490233 | 3_4:-58967245 | None:intergenic |
| ACGCTAACGGCGTCAATGGA+AGG | 0.493232 | 3_4:+58967387 | Msa0510120:CDS |
| TGTCCTGGTGTTTATGGTAA+AGG | 0.498489 | 3_4:+58962713 | Msa0510120:CDS |
| ACCATGCTGAAACTGAAGGT+TGG | 0.500598 | 3_4:-58962175 | None:intergenic |
| TGTACTGGAGAGTTCGGTAA+AGG | 0.500755 | 3_4:+58967305 | Msa0510120:CDS |
| TCAGTCAATTTAATCTGGTA+TGG | 0.500777 | 3_4:+58962077 | Msa0510120:CDS |
| GTTTAAGGAAAGTGAAAGCT+GGG | 0.500888 | 3_4:-58962246 | None:intergenic |
| CCATAAATAGGTTGGTGAAA+GGG | 0.501451 | 3_4:-58967125 | None:intergenic |
| GGATGACTGGGGTTTGATGG+TGG | 0.502339 | 3_4:-58966787 | None:intergenic |
| CCACGTAGCGACGGATGACT+GGG | 0.503288 | 3_4:-58966799 | None:intergenic |
| GGTGCTTACCCTGGTTATGC+TGG | 0.504722 | 3_4:+58962734 | Msa0510120:CDS |
| GTACTGGAGAGTTCGGTAAA+GGG | 0.504851 | 3_4:+58967306 | Msa0510120:CDS |
| GGTATTGGAACTTTAATTGT+TGG | 0.504989 | 3_4:-58966653 | None:intergenic |
| AAATTTGCTTACATTTGGGT+TGG | 0.505466 | 3_4:+58962473 | Msa0510120:CDS |
| CTTGACGAGAATTACTCATT+CGG | 0.506476 | 3_4:+58966894 | Msa0510120:CDS |
| AACTCAGAAACACAGTGTCC+AGG | 0.509516 | 3_4:+58962497 | Msa0510120:CDS |
| CTACGCTGGGAACCTCTTGG+TGG | 0.511453 | 3_4:+58967340 | Msa0510120:CDS |
| AGATGTTAGTACAACGTTGA+TGG | 0.511459 | 3_4:-58962360 | None:intergenic |
| CGGTCCACAAAGCGCACCAT+TGG | 0.512236 | 3_4:+58962553 | Msa0510120:CDS |
| GTGGTTGATGGTATTTATAG+GGG | 0.513048 | 3_4:-58966458 | None:intergenic |
| TCTTCAATGGAAACCAGAAA+AGG | 0.516174 | 3_4:+58962440 | Msa0510120:CDS |
| AGCAAATCACCAGCATAACC+AGG | 0.517128 | 3_4:-58962743 | None:intergenic |
| TTTGGAAATGGGTACTATCA+AGG | 0.519030 | 3_4:+58967248 | Msa0510120:CDS |
| GATGACTGGGGTTTGATGGT+GGG | 0.519527 | 3_4:-58966786 | None:intergenic |
| CGTGGCTAGTTTATTGGCTG+GGG | 0.521206 | 3_4:+58967211 | Msa0510120:CDS |
| TCGTTATTTGGTGCAACTAA+CGG | 0.527425 | 3_4:-58967161 | None:intergenic |
| AGTGTCCAGGGTTATGTGCT+TGG | 0.528873 | 3_4:+58962510 | Msa0510120:CDS |
| ACCATAAATTTGCTTACCTG+TGG | 0.529298 | 3_4:+58967060 | Msa0510120:CDS |
| AAAGAAGCACCTCTTGAAGC+TGG | 0.534172 | 3_4:+58967275 | Msa0510120:CDS |
| GTAGAACAAACCGAGGTTGT+CGG | 0.534684 | 3_4:-58967437 | None:intergenic |
| GAGATTATGGCACGTTGGGT+AGG | 0.547244 | 3_4:-58966738 | None:intergenic |
| CAAAACCTCGTGCTCACAAG+AGG | 0.549913 | 3_4:+58966861 | Msa0510120:CDS |
| CCCATAAATAGGTTGGTGAA+AGG | 0.558441 | 3_4:-58967126 | None:intergenic |
| TAAATTTGCTTACCTGTGGG+TGG | 0.560409 | 3_4:+58967064 | Msa0510120:CDS |
| CACAAAGGCCCTCTTCTCAC+CGG | 0.560896 | 3_4:+58966675 | Msa0510120:CDS |
| TTTGAGGCCCATAAATAGGT+TGG | 0.561084 | 3_4:-58967133 | None:intergenic |
| GTGTAAATGAAATGAAATTG+AGG | 0.562164 | 3_4:-58966497 | None:intergenic |
| TCCATCAATCTCATATGGTA+CGG | 0.562294 | 3_4:+58966705 | Msa0510120:CDS |
| CGTTAATCACCATGCCGTCA+AGG | 0.566717 | 3_4:-58967190 | None:intergenic |
| GCTTCAAGAGGTGCTTCAGA+AGG | 0.567284 | 3_4:-58962680 | None:intergenic |
| ACTCAGAAACACAGTGTCCA+GGG | 0.569464 | 3_4:+58962498 | Msa0510120:CDS |
| GGGCTTACCCTGGCTACGCT+GGG | 0.570670 | 3_4:+58967327 | Msa0510120:CDS |
| ATTATCCAATTAGCTTCCAA+AGG | 0.570977 | 3_4:+58962323 | Msa0510120:CDS |
| TTCCACCATGCTGAAACTGA+AGG | 0.570995 | 3_4:-58962179 | None:intergenic |
| TACTGGAGAGTTCGGTAAAG+GGG | 0.572083 | 3_4:+58967307 | Msa0510120:CDS |
| TTTGTGGACCGTAAATTGGT+TGG | 0.572936 | 3_4:-58962541 | None:intergenic |
| CGAATGAGTAATTCTCGTCA+AGG | 0.573752 | 3_4:-58966893 | None:intergenic |
| TAATTTCCACCACGTAGCGA+CGG | 0.575006 | 3_4:-58966808 | None:intergenic |
| GTAGAAGGATCATACAAAGC+AGG | 0.575060 | 3_4:-58962830 | None:intergenic |
| TATTTGTAAGAGGAAACAAA+AGG | 0.575893 | 3_4:-58966531 | None:intergenic |
| GGTAATGAAGAAGCTGAGAT+TGG | 0.577764 | 3_4:-58962025 | None:intergenic |
| GTTGCACCAAACAACGATGT+AGG | 0.577934 | 3_4:+58962575 | Msa0510120:CDS |
| TATGGTAAAGGTGCTTACCC+TGG | 0.580611 | 3_4:+58962725 | Msa0510120:CDS |
| ACTCTTTGACCCGACAACCT+CGG | 0.582146 | 3_4:+58967427 | Msa0510120:CDS |
| GGTGCTAGTTTCAATGCTCA+TGG | 0.589796 | 3_4:+58962782 | Msa0510120:CDS |
| AACCTTCAGTTTCAGCATGG+TGG | 0.591696 | 3_4:+58962177 | Msa0510120:CDS |
| AGAGGTTCCCAGCGTAGCCA+GGG | 0.593428 | 3_4:-58967334 | None:intergenic |
| AAATTTGCTTACCTGTGGGT+GGG | 0.596904 | 3_4:+58967065 | Msa0510120:CDS |
| TCCAGTAGATGTGGGACACA+CGG | 0.597099 | 3_4:+58967026 | Msa0510120:CDS |
| GTTGTCGGGTCAAAGAGTGC+GGG | 0.601302 | 3_4:-58967422 | None:intergenic |
| TTCGGTAAAGGGGCTTACCC+TGG | 0.601683 | 3_4:+58967317 | Msa0510120:CDS |
| TCGTTGTTTGGTGCAACCAA+TGG | 0.602504 | 3_4:-58962569 | None:intergenic |
| CCATAAATTTGCTTACCTGT+GGG | 0.602576 | 3_4:+58967061 | Msa0510120:CDS |
| AATGTCCAGGTCAATGCGCA+TGG | 0.604196 | 3_4:+58967102 | Msa0510120:CDS |
| CGATGTGGGCCTTGACGGCA+TGG | 0.604938 | 3_4:+58967181 | Msa0510120:CDS |
| TGAAGATGGTGAAGAAAGTG+AGG | 0.607624 | 3_4:-58962144 | None:intergenic |
| ATGGACCGATGTGGCACACA+CGG | 0.610497 | 3_4:+58962410 | Msa0510120:CDS |
| CATCAACGTGGTTCTCACTT+CGG | 0.614919 | 3_4:+58966977 | Msa0510120:CDS |
| AAAGTTGTAAAGAAAATGCA+AGG | 0.616990 | 3_4:-58966429 | None:intergenic |
| AATTCAGAGACACAATGTCC+AGG | 0.618178 | 3_4:+58967089 | Msa0510120:CDS |
| CAAGCTGAAGCAGCTTCAAG+AGG | 0.620549 | 3_4:-58962692 | None:intergenic |
| GGTTCTCACTTCGGCTGACG+TGG | 0.623744 | 3_4:+58966986 | Msa0510120:CDS |
| GGTTGTCGGGTCAAAGAGTG+CGG | 0.623998 | 3_4:-58967423 | None:intergenic |
| AAGAACCGTGTGTGCCACAT+CGG | 0.625233 | 3_4:-58962415 | None:intergenic |
| AATGGAAACCAGAAAAGGCA+AGG | 0.629708 | 3_4:+58962445 | Msa0510120:CDS |
| ACCAACCTTCAGTTTCAGCA+TGG | 0.631067 | 3_4:+58962174 | Msa0510120:CDS |
| AATGGAGTAGAGAAATGAAG+AGG | 0.631823 | 3_4:-58966596 | None:intergenic |
| TCTCTGAATTACCCACCCAC+AGG | 0.634449 | 3_4:-58967076 | None:intergenic |
| TATTTGGTGCAACTAACGGT+GGG | 0.635436 | 3_4:-58967157 | None:intergenic |
| AAAACGTTCTACAGAAACAT+CGG | 0.637530 | 3_4:-58962384 | None:intergenic |
| CGATGTAGGACTTGATGGAA+TGG | 0.638212 | 3_4:+58962589 | Msa0510120:CDS |
| AATCGGAGATTATGGCACGT+TGG | 0.639144 | 3_4:-58966743 | None:intergenic |
| TTATTTGGTGCAACTAACGG+TGG | 0.641683 | 3_4:-58967158 | None:intergenic |
| CAAGCCGAACCAGCTTCAAG+AGG | 0.642603 | 3_4:-58967284 | None:intergenic |
| CCCAGTCATCCGTCGCTACG+TGG | 0.642881 | 3_4:+58966799 | Msa0510120:CDS |
| AGTTGCACCAAATAACGATG+TGG | 0.642974 | 3_4:+58967166 | Msa0510120:CDS |
| AGTCATCCGTCGCTACGTGG+TGG | 0.646784 | 3_4:+58966802 | Msa0510120:CDS |
| GTTGCACCAAATAACGATGT+GGG | 0.647354 | 3_4:+58967167 | Msa0510120:CDS |
| GGTGCAAGTTATAACGCTAA+CGG | 0.650018 | 3_4:+58967374 | Msa0510120:CDS |
| CTCTTGGTGGATCCAACAAG+CGG | 0.653453 | 3_4:+58967353 | Msa0510120:CDS |
| CGCTTGTTGGATCCACCAAG+AGG | 0.659598 | 3_4:-58967352 | None:intergenic |
| AATGGCCAAGCACATAACCC+TGG | 0.674129 | 3_4:-58962515 | None:intergenic |
| GTGAACCTCTTGTGAGCACG+AGG | 0.688439 | 3_4:-58966866 | None:intergenic |
| CATAGAGTAATGGACCGTTG+TGG | 0.689245 | 3_4:-58962046 | None:intergenic |
| CAGCTTCTTCATTACCACAA+CGG | 0.692004 | 3_4:+58962032 | Msa0510120:CDS |
| GCAAATCACCAGCATAACCA+GGG | 0.695085 | 3_4:-58962742 | None:intergenic |
| GCACCTTTACCATAAACACC+AGG | 0.705559 | 3_4:-58962716 | None:intergenic |
| TACTAGAGTAGAACAAACCG+AGG | 0.705627 | 3_4:-58967444 | None:intergenic |
| TGACGGCATGGTGATTAACG+TGG | 0.706791 | 3_4:+58967193 | Msa0510120:CDS |
| TTAAAGTTCCAATACCACAA+AGG | 0.712447 | 3_4:+58966660 | Msa0510120:CDS |
| CACGTAGCGACGGATGACTG+GGG | 0.746685 | 3_4:-58966798 | None:intergenic |
| AAAGACAAACGCCATCAACG+TGG | 0.767227 | 3_4:+58966965 | Msa0510120:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | TTTATAATTTTTTGATTATG+CGG | + | chr3_4:58962968-58962987 | Msa0510120:intron | 10.0% |
| !!! | TTGCTTTTTTAAAAATATAT+TGG | + | chr3_4:58963026-58963045 | Msa0510120:intron | 10.0% |
| !! | TATTATTTATCTTTGTATAT+TGG | + | chr3_4:58963677-58963696 | Msa0510120:intron | 10.0% |
| !!! | ATTGATACTTTTATTTTTAA+TGG | - | chr3_4:58963963-58963982 | None:intergenic | 10.0% |
| !!! | TTTTAAATAGAAATCTTTTA+AGG | + | chr3_4:58964353-58964372 | Msa0510120:intron | 10.0% |
| !! | TATTCTTAATAAAAAAAACT+CGG | + | chr3_4:58964380-58964399 | Msa0510120:intron | 10.0% |
| !! | TTATAGAAAATATTCAAAAT+TGG | + | chr3_4:58964467-58964486 | Msa0510120:intron | 10.0% |
| !!! | AATTTGTAATTAAATTTTGT+GGG | - | chr3_4:58965719-58965738 | None:intergenic | 10.0% |
| !!! | AAATTTGTAATTAAATTTTG+TGG | - | chr3_4:58965720-58965739 | None:intergenic | 10.0% |
| !!! | CAAAATTACATATTTTCAAA+TGG | + | chr3_4:58963762-58963781 | Msa0510120:intron | 15.0% |
| !!! | ATAAAAGTATCAATATAAGA+AGG | + | chr3_4:58963969-58963988 | Msa0510120:intron | 15.0% |
| !!! | ATATACCATTTTCTTTTTTT+TGG | - | chr3_4:58964020-58964039 | None:intergenic | 15.0% |
| !! | TAAGTATATTGAAAATATCA+TGG | - | chr3_4:58964686-58964705 | None:intergenic | 15.0% |
| !! | ATATTAATTGCACAATTAAT+TGG | + | chr3_4:58964720-58964739 | Msa0510120:intron | 15.0% |
| !!! | TATCCATTTTACTTATATTT+GGG | + | chr3_4:58965220-58965239 | Msa0510120:intron | 15.0% |
| !! | TTTAATTACAAATTTAAACG+AGG | + | chr3_4:58965725-58965744 | Msa0510120:intron | 15.0% |
| !! | TTAATTACAAATTTAAACGA+GGG | + | chr3_4:58965726-58965745 | Msa0510120:intron | 15.0% |
| !!! | TTTTTTTGGTTACAATTTTT+TGG | + | chr3_4:58965815-58965834 | Msa0510120:intron | 15.0% |
| !! | ATAAAAACCAATAAATAACA+CGG | + | chr3_4:58966223-58966242 | Msa0510120:intron | 15.0% |
| !!! | ATCAAGAATTTGTTTGTTTA+AGG | - | chr3_4:58962264-58962283 | None:intergenic | 20.0% |
| !!! | GATAATGTTTTTGTTTGTTA+AGG | - | chr3_4:58962309-58962328 | None:intergenic | 20.0% |
| !! | GTACAAATAAGAAATTATGT+AGG | + | chr3_4:58962927-58962946 | Msa0510120:intron | 20.0% |
| !!! | ATAAAGATGAACATAGTTTT+GGG | + | chr3_4:58963135-58963154 | Msa0510120:intron | 20.0% |
| !! | AAATATTGTCAAAGTAAGTT+AGG | + | chr3_4:58963738-58963757 | Msa0510120:intron | 20.0% |
| !! | GATAAAGAAGAAAGAAAAAA+AGG | - | chr3_4:58963899-58963918 | None:intergenic | 20.0% |
| !! | TAGTATAATTAGAACTTGTA+AGG | - | chr3_4:58964153-58964172 | None:intergenic | 20.0% |
| !! | GGAGAAAATAAATTTAAACA+AGG | - | chr3_4:58964194-58964213 | None:intergenic | 20.0% |
| !! | TCATTTCATAAGATTGAAAT+AGG | - | chr3_4:58964215-58964234 | None:intergenic | 20.0% |
| !! | ATCTTATGAAATGAAATATC+AGG | + | chr3_4:58964221-58964240 | Msa0510120:intron | 20.0% |
| !! | GATAAATTAAATTTCTTCCT+AGG | - | chr3_4:58964270-58964289 | None:intergenic | 20.0% |
| !! | AGTAAAAATTAGAAGTTCTT+GGG | - | chr3_4:58964571-58964590 | None:intergenic | 20.0% |
| !! | AAGTAAAAATTAGAAGTTCT+TGG | - | chr3_4:58964572-58964591 | None:intergenic | 20.0% |
| !! | TTATTAAGTCAAACAAATCT+AGG | + | chr3_4:58964659-58964678 | Msa0510120:intron | 20.0% |
| !! | TCAAAGATCTTAATTACAAT+AGG | + | chr3_4:58965046-58965065 | Msa0510120:intron | 20.0% |
| !!! | GTATCCATTTTACTTATATT+TGG | + | chr3_4:58965219-58965238 | Msa0510120:intron | 20.0% |
| !! | TATCCCAAATATAAGTAAAA+TGG | - | chr3_4:58965226-58965245 | None:intergenic | 20.0% |
| !!! | CATTTACTTGCTAAAAAATA+CGG | + | chr3_4:58965345-58965364 | Msa0510120:intron | 20.0% |
| !!! | TTTTTGGTTACAAAAAGTTT+AGG | + | chr3_4:58965831-58965850 | Msa0510120:intron | 20.0% |
| !!! | AAGTATTTTGTATTTGTAAG+AGG | - | chr3_4:58966544-58966563 | None:intergenic | 20.0% |
| !!! | TAGCTTTTTTATTTGATCAT+TGG | - | chr3_4:58966931-58966950 | None:intergenic | 20.0% |
| ! | AAATCTCAGTCAATTTAATC+TGG | + | chr3_4:58962072-58962091 | Msa0510120:CDS | 25.0% |
| !! | TTGATTATAGCTTTTTGTGA+TGG | - | chr3_4:58962113-58962132 | None:intergenic | 25.0% |
| !! | TTGCAAAATTTGCTTACATT+TGG | + | chr3_4:58962468-58962487 | Msa0510120:CDS | 25.0% |
| !! | TGCAAAATTTGCTTACATTT+GGG | + | chr3_4:58962469-58962488 | Msa0510120:CDS | 25.0% |
| ! | TTTCAATCTATGTTTGTTTG+TGG | + | chr3_4:58963102-58963121 | Msa0510120:intron | 25.0% |
| ! | TTCAATCTATGTTTGTTTGT+GGG | + | chr3_4:58963103-58963122 | Msa0510120:intron | 25.0% |
| !! | GATAAAGATGAACATAGTTT+TGG | + | chr3_4:58963134-58963153 | Msa0510120:intron | 25.0% |
| !! | AAGTGTTGTTAATAAAGCAT+TGG | - | chr3_4:58963189-58963208 | None:intergenic | 25.0% |
| !! | ATTGGTTCTTAATTACTGTT+TGG | + | chr3_4:58963223-58963242 | Msa0510120:intron | 25.0% |
| ! | GTACTAGTACTATTACTATT+AGG | - | chr3_4:58963269-58963288 | None:intergenic | 25.0% |
| ! | AATAAGAAATTATCACCACT+TGG | + | chr3_4:58963385-58963404 | Msa0510120:intron | 25.0% |
| ! | AAAATTCATCTTCTCTTTCA+AGG | + | chr3_4:58963421-58963440 | Msa0510120:intron | 25.0% |
| ! | CTAACAATACATTATCATGA+AGG | - | chr3_4:58963463-58963482 | None:intergenic | 25.0% |
| ! | TAATAGGATAGATTGAATCA+CGG | + | chr3_4:58963814-58963833 | Msa0510120:intron | 25.0% |
| !! | AAGAAGGCACATAAAAAATA+TGG | + | chr3_4:58963985-58964004 | Msa0510120:intron | 25.0% |
| !!! | ACCATTTTCTTTTTTTTGGA+GGG | - | chr3_4:58964016-58964035 | None:intergenic | 25.0% |
| !!! | TACCATTTTCTTTTTTTTGG+AGG | - | chr3_4:58964017-58964036 | None:intergenic | 25.0% |
| !!! | TAGCACTTTTTTAAATTCCT+AGG | + | chr3_4:58964250-58964269 | Msa0510120:intron | 25.0% |
| ! | AGAAAAGATAATCATGCAAA+TGG | - | chr3_4:58964444-58964463 | None:intergenic | 25.0% |
| !!! | TTTTTTTAAGTCTCACAGTT+AGG | + | chr3_4:58964509-58964528 | Msa0510120:intron | 25.0% |
| ! | GTGCAATTAATATTCTATTG+TGG | - | chr3_4:58964713-58964732 | None:intergenic | 25.0% |
| ! | TGCACAATTAATTGGAATTA+AGG | + | chr3_4:58964728-58964747 | Msa0510120:intron | 25.0% |
| !!! | TTTTTTTCTTTCTCTCTAGT+TGG | - | chr3_4:58964788-58964807 | None:intergenic | 25.0% |
| ! | CTTATACTTTCACAAATAAG+AGG | + | chr3_4:58964844-58964863 | Msa0510120:intron | 25.0% |
| !! | AGAATTAGAGTTTTCAATTC+AGG | + | chr3_4:58964924-58964943 | Msa0510120:intron | 25.0% |
| !! | ACATAGCTTTACTAAAACAT+TGG | + | chr3_4:58965008-58965027 | Msa0510120:intron | 25.0% |
| !! | CATAGCTTTACTAAAACATT+GGG | + | chr3_4:58965009-58965028 | Msa0510120:intron | 25.0% |
| ! | ACTAGATAACAACCTATAAT+GGG | - | chr3_4:58965127-58965146 | None:intergenic | 25.0% |
| !!! | TTTTGACTTTGCTTATAGTT+TGG | - | chr3_4:58965193-58965212 | None:intergenic | 25.0% |
| !! | TTAATTGAAACACAGGATTT+TGG | + | chr3_4:58965397-58965416 | Msa0510120:intron | 25.0% |
| !!! | TTAGATTTTTTTTTCCCTTG+AGG | - | chr3_4:58965509-58965528 | None:intergenic | 25.0% |
| !!! | AATACTTTGAAATAGTAAGC+TGG | + | chr3_4:58965556-58965575 | Msa0510120:intron | 25.0% |
| ! | TGAAATTTACTCATAGTAAG+TGG | + | chr3_4:58965638-58965657 | Msa0510120:intron | 25.0% |
| !!! | AACGGTTCATTCTTTTTTTT+TGG | + | chr3_4:58965801-58965820 | Msa0510120:intron | 25.0% |
| !!! | ATTCTAGTTTGCTTACTTTT+TGG | - | chr3_4:58966059-58966078 | None:intergenic | 25.0% |
| !!! | CTTTGATTTCTTTTGCTTTA+TGG | - | chr3_4:58966083-58966102 | None:intergenic | 25.0% |
| ! | TAAAGCAAAAGAAATCAAAG+AGG | + | chr3_4:58966083-58966102 | Msa0510120:intron | 25.0% |
| !!! | GTTGCTTTTTCTAAATTCTT+AGG | - | chr3_4:58966279-58966298 | None:intergenic | 25.0% |
| ! | AAAGTTGTAAAGAAAATGCA+AGG | - | chr3_4:58966432-58966451 | None:intergenic | 25.0% |
| ! | ATGAAATGAAATTGAGGTTA+TGG | - | chr3_4:58966494-58966513 | None:intergenic | 25.0% |
| ! | GTGTAAATGAAATGAAATTG+AGG | - | chr3_4:58966500-58966519 | None:intergenic | 25.0% |
| ! | TATTTGTAAGAGGAAACAAA+AGG | - | chr3_4:58966534-58966553 | None:intergenic | 25.0% |
| ! | GAGATTTTACCATAGAGTAA+TGG | - | chr3_4:58962059-58962078 | None:intergenic | 30.0% |
| TCAGTCAATTTAATCTGGTA+TGG | + | chr3_4:58962077-58962096 | Msa0510120:CDS | 30.0% | |
| !!! | ATTTTTTCTTTGAGGTGAGA+TGG | - | chr3_4:58962223-58962242 | None:intergenic | 30.0% |
| CTTGATGAGAATTACTCATT+AGG | + | chr3_4:58962278-58962297 | Msa0510120:CDS | 30.0% | |
| ! | ATTATCCAATTAGCTTCCAA+AGG | + | chr3_4:58962323-58962342 | Msa0510120:CDS | 30.0% |
| AAAACGTTCTACAGAAACAT+CGG | - | chr3_4:58962387-58962406 | None:intergenic | 30.0% | |
| ! | TTCTGTAGAACGTTTTTGTA+TGG | + | chr3_4:58962391-58962410 | Msa0510120:CDS | 30.0% |
| ! | AAATTTGCTTACATTTGGGT+TGG | + | chr3_4:58962473-58962492 | Msa0510120:CDS | 30.0% |
| TGATGGAATGGTGATAAATT+TGG | + | chr3_4:58962601-58962620 | Msa0510120:CDS | 30.0% | |
| GAAAGTAACCATTTCCAAAA+GGG | - | chr3_4:58962655-58962674 | None:intergenic | 30.0% | |
| TGAAAGTAACCATTTCCAAA+AGG | - | chr3_4:58962656-58962675 | None:intergenic | 30.0% | |
| ! | TTTGGAAATGGTTACTTTCA+AGG | + | chr3_4:58962656-58962675 | Msa0510120:CDS | 30.0% |
| TTGCAATGTTCTTCAAACAA+GGG | - | chr3_4:58962870-58962889 | None:intergenic | 30.0% | |
| ATTGCAATGTTCTTCAAACA+AGG | - | chr3_4:58962871-58962890 | None:intergenic | 30.0% | |
| TCAATCTATGTTTGTTTGTG+GGG | + | chr3_4:58963104-58963123 | Msa0510120:intron | 30.0% | |
| TCGACTGTGTTAAGTATTAT+GGG | - | chr3_4:58963532-58963551 | None:intergenic | 30.0% | |
| TTTCAAATGGTCATCTATTG+CGG | + | chr3_4:58963775-58963794 | Msa0510120:intron | 30.0% | |
| TCCCTCCAAAAAAAAGAAAA+TGG | + | chr3_4:58964012-58964031 | Msa0510120:intron | 30.0% | |
| !!! | ACTCTCACGTTGATTTTTTA+GGG | - | chr3_4:58964080-58964099 | None:intergenic | 30.0% |
| !!! | AACTCTCACGTTGATTTTTT+AGG | - | chr3_4:58964081-58964100 | None:intergenic | 30.0% |
| ! | AATATTGTGAGATGGACTTT+AGG | - | chr3_4:58964318-58964337 | None:intergenic | 30.0% |
| TACTTCGAAATATTGTGAGA+TGG | - | chr3_4:58964326-58964345 | None:intergenic | 30.0% | |
| ! | TGCAAATGGTATTTCTGAAA+AGG | - | chr3_4:58964430-58964449 | None:intergenic | 30.0% |
| ! | AACTCTAATTCTTTTCCTGA+AGG | - | chr3_4:58964916-58964935 | None:intergenic | 30.0% |
| ! | TAATGGGTGTATTTAGTAGT+AGG | - | chr3_4:58965111-58965130 | None:intergenic | 30.0% |
| CTACTAAATACACCCATTAT+AGG | + | chr3_4:58965112-58965131 | Msa0510120:intron | 30.0% | |
| GACTAGATAACAACCTATAA+TGG | - | chr3_4:58965128-58965147 | None:intergenic | 30.0% | |
| TGAGTGATTAATTGAAACAC+AGG | + | chr3_4:58965390-58965409 | Msa0510120:intron | 30.0% | |
| !! | ACTCATATTTTTGCCTATTC+AGG | - | chr3_4:58965434-58965453 | None:intergenic | 30.0% |
| CTATGAGTAAATTTCATGAC+TGG | - | chr3_4:58965634-58965653 | None:intergenic | 30.0% | |
| TATTACTAGCTATGTCAAGA+AGG | + | chr3_4:58965664-58965683 | Msa0510120:intron | 30.0% | |
| TTGGTTACAAAAAGTTTAGG+TGG | + | chr3_4:58965834-58965853 | Msa0510120:intron | 30.0% | |
| TTACAAAAAGTTTAGGTGGA+TGG | + | chr3_4:58965838-58965857 | Msa0510120:intron | 30.0% | |
| !! | GTATCAACCGTGTTATTTAT+TGG | - | chr3_4:58966233-58966252 | None:intergenic | 30.0% |
| TCTAAATTCTTAGGATTGTG+CGG | - | chr3_4:58966270-58966289 | None:intergenic | 30.0% | |
| TGAAGAAGTCAAATTAAGTG+GGG | - | chr3_4:58966352-58966371 | None:intergenic | 30.0% | |
| CTGAAGAAGTCAAATTAAGT+GGG | - | chr3_4:58966353-58966372 | None:intergenic | 30.0% | |
| TCTGAAGAAGTCAAATTAAG+TGG | - | chr3_4:58966354-58966373 | None:intergenic | 30.0% | |
| AAAGAAAATGCAAGGAAAGT+AGG | - | chr3_4:58966424-58966443 | None:intergenic | 30.0% | |
| ! | GGTATTGGAACTTTAATTGT+TGG | - | chr3_4:58966656-58966675 | None:intergenic | 30.0% |
| TTAAAGTTCCAATACCACAA+AGG | + | chr3_4:58966660-58966679 | Msa0510120:CDS | 30.0% | |
| AAATCTCCATCAATCTCATA+TGG | + | chr3_4:58966700-58966719 | Msa0510120:CDS | 30.0% | |
| GGAAATTGAAGTGATGAAAT+CGG | - | chr3_4:58966763-58966782 | None:intergenic | 30.0% | |
| AATAAAAAAGCTAGCATCCA+AGG | + | chr3_4:58966938-58966957 | Msa0510120:CDS | 30.0% | |
| ATAAAAAAGCTAGCATCCAA+GGG | + | chr3_4:58966939-58966958 | Msa0510120:CDS | 30.0% | |
| !! | GAGATGGTAGTATTTTTCAG+TGG | - | chr3_4:58962207-58962226 | None:intergenic | 35.0% |
| !!! | CTGGGTAGATTTTTTCTTTG+AGG | - | chr3_4:58962231-58962250 | None:intergenic | 35.0% |
| GTTTAAGGAAAGTGAAAGCT+GGG | - | chr3_4:58962249-58962268 | None:intergenic | 35.0% | |
| TGTTTAAGGAAAGTGAAAGC+TGG | - | chr3_4:58962250-58962269 | None:intergenic | 35.0% | |
| AGATGTTAGTACAACGTTGA+TGG | - | chr3_4:58962363-58962382 | None:intergenic | 35.0% | |
| TCTTCAATGGAAACCAGAAA+AGG | + | chr3_4:58962440-58962459 | Msa0510120:CDS | 35.0% | |
| CCATTTCACCAACCAATTTA+CGG | + | chr3_4:58962533-58962552 | Msa0510120:CDS | 35.0% | |
| !!! | AATTTGGCTAGTCTTTTAGC+TGG | + | chr3_4:58962617-58962636 | Msa0510120:CDS | 35.0% |
| !! | TTGCTTGTTGATTCTACTAC+TGG | + | chr3_4:58962761-58962780 | Msa0510120:CDS | 35.0% |
| TTCAATGCTCATGGTGATAA+TGG | + | chr3_4:58962791-58962810 | Msa0510120:CDS | 35.0% | |
| GTTGAGCAAGATAATGTAGA+AGG | - | chr3_4:58962848-58962867 | None:intergenic | 35.0% | |
| ! | TTGCAATAGTTACTTTCCAC+TGG | + | chr3_4:58962884-58962903 | Msa0510120:intron | 35.0% |
| ! | AGCATTGAGGATTCTAGATT+GGG | + | chr3_4:58963162-58963181 | Msa0510120:intron | 35.0% |
| !! | ACTTGTCGAGTTTCTAGTAT+TGG | + | chr3_4:58963205-58963224 | Msa0510120:intron | 35.0% |
| TAATTACTGTTTGGTCCAAG+TGG | + | chr3_4:58963232-58963251 | Msa0510120:intron | 35.0% | |
| AATTACTGTTTGGTCCAAGT+GGG | + | chr3_4:58963233-58963252 | Msa0510120:intron | 35.0% | |
| TGTTAAGTATTATGGGACTC+AGG | - | chr3_4:58963525-58963544 | None:intergenic | 35.0% | |
| GTCGACTGTGTTAAGTATTA+TGG | - | chr3_4:58963533-58963552 | None:intergenic | 35.0% | |
| ACTCATCGAGACAAATCTAA+CGG | + | chr3_4:58963642-58963661 | Msa0510120:intron | 35.0% | |
| TTCAAATGGTCATCTATTGC+GGG | + | chr3_4:58963776-58963795 | Msa0510120:intron | 35.0% | |
| TCAAGAATATTGTCCCGAAA+GGG | - | chr3_4:58963862-58963881 | None:intergenic | 35.0% | |
| ATCAAGAATATTGTCCCGAA+AGG | - | chr3_4:58963863-58963882 | None:intergenic | 35.0% | |
| ! | CTAGAGTATTATTCACTCGA+TGG | - | chr3_4:58963921-58963940 | None:intergenic | 35.0% |
| TGTTGCTCATGACTTTGTAA+CGG | - | chr3_4:58964048-58964067 | None:intergenic | 35.0% | |
| TCTGATTAAGATCGATCGAA+AGG | - | chr3_4:58964545-58964564 | None:intergenic | 35.0% | |
| GAATACATACGATCACATGT+TGG | - | chr3_4:58964633-58964652 | None:intergenic | 35.0% | |
| ! | TTTTCTTTCTCTCTAGTTGG+TGG | - | chr3_4:58964785-58964804 | None:intergenic | 35.0% |
| GACCAACATGATCATGATAT+TGG | + | chr3_4:58964871-58964890 | Msa0510120:intron | 35.0% | |
| CTCCAATATCATGATCATGT+TGG | - | chr3_4:58964876-58964895 | None:intergenic | 35.0% | |
| AGCTGTTGGATAAGGATTAT+AGG | + | chr3_4:58965167-58965186 | Msa0510120:intron | 35.0% | |
| CTTGCTAAAAAATACGGATG+TGG | + | chr3_4:58965351-58965370 | Msa0510120:intron | 35.0% | |
| TGGGACGAAGTTTATTAAAC+CGG | - | chr3_4:58965700-58965719 | None:intergenic | 35.0% | |
| !!! | GAGGGTTTTTTTTTTAGCAC+TGG | + | chr3_4:58965744-58965763 | Msa0510120:intron | 35.0% |
| TAGTAGAATGAAACACACGT+TGG | - | chr3_4:58966018-58966037 | None:intergenic | 35.0% | |
| TTTGCAATTAGCTGGCTATA+TGG | + | chr3_4:58966169-58966188 | Msa0510120:intron | 35.0% | |
| ! | TTATGCACTCTCTTCCTTTT+AGG | + | chr3_4:58966389-58966408 | Msa0510120:intron | 35.0% |
| GATGGTATTTATAGGGGATT+TGG | - | chr3_4:58966455-58966474 | None:intergenic | 35.0% | |
| !! | GTGGTTGATGGTATTTATAG+GGG | - | chr3_4:58966461-58966480 | None:intergenic | 35.0% |
| !! | CGTGGTTGATGGTATTTATA+GGG | - | chr3_4:58966462-58966481 | None:intergenic | 35.0% |
| !! | ACGTGGTTGATGGTATTTAT+AGG | - | chr3_4:58966463-58966482 | None:intergenic | 35.0% |
| AGGTTATGGAAAAAGAAACG+TGG | - | chr3_4:58966480-58966499 | None:intergenic | 35.0% | |
| GTAGAGAAATGAAGAGGAAT+AGG | - | chr3_4:58966593-58966612 | None:intergenic | 35.0% | |
| AATGGAGTAGAGAAATGAAG+AGG | - | chr3_4:58966599-58966618 | None:intergenic | 35.0% | |
| ! | GAGATTGATGGAGATTTTTC+CGG | - | chr3_4:58966697-58966716 | None:intergenic | 35.0% |
| TCCATCAATCTCATATGGTA+CGG | + | chr3_4:58966705-58966724 | Msa0510120:CDS | 35.0% | |
| AGTGATGAAATCGGAGATTA+TGG | - | chr3_4:58966754-58966773 | None:intergenic | 35.0% | |
| CTTGACGAGAATTACTCATT+CGG | + | chr3_4:58966894-58966913 | Msa0510120:CDS | 35.0% | |
| ! | ACCATAAATTTGCTTACCTG+TGG | + | chr3_4:58967060-58967079 | Msa0510120:CDS | 35.0% |
| ! | CCATAAATTTGCTTACCTGT+GGG | + | chr3_4:58967061-58967080 | Msa0510120:CDS | 35.0% |
| !! | CCATAAATAGGTTGGTGAAA+GGG | - | chr3_4:58967128-58967147 | None:intergenic | 35.0% |
| CCTTTCACCAACCTATTTAT+GGG | + | chr3_4:58967126-58967145 | Msa0510120:CDS | 35.0% | |
| !! | TCGTTATTTGGTGCAACTAA+CGG | - | chr3_4:58967164-58967183 | None:intergenic | 35.0% |
| !! | GATTAACGTGGCTAGTTTAT+TGG | + | chr3_4:58967205-58967224 | Msa0510120:CDS | 35.0% |
| TGACGAATCCATTTGGAAAT+GGG | + | chr3_4:58967237-58967256 | Msa0510120:CDS | 35.0% | |
| TGATAGTACCCATTTCCAAA+TGG | - | chr3_4:58967248-58967267 | None:intergenic | 35.0% | |
| TTTGGAAATGGGTACTATCA+AGG | + | chr3_4:58967248-58967267 | Msa0510120:CDS | 35.0% | |
| GGTAATGAAGAAGCTGAGAT+TGG | - | chr3_4:58962028-58962047 | None:intergenic | 40.0% | |
| CAGCTTCTTCATTACCACAA+CGG | + | chr3_4:58962032-58962051 | Msa0510120:CDS | 40.0% | |
| TGAAGATGGTGAAGAAAGTG+AGG | - | chr3_4:58962147-58962166 | None:intergenic | 40.0% | |
| !!! | GGTTGGTTTGGTTTTGAAGA+TGG | - | chr3_4:58962161-58962180 | None:intergenic | 40.0% |
| ! | GTTCACCTTTGGAAGCTAAT+TGG | - | chr3_4:58962331-58962350 | None:intergenic | 40.0% |
| GGAATCTTTGTGTTCACCTT+TGG | - | chr3_4:58962342-58962361 | None:intergenic | 40.0% | |
| ACACGGTTCTTCTTCTTCAA+TGG | + | chr3_4:58962427-58962446 | Msa0510120:CDS | 40.0% | |
| AATGGAAACCAGAAAAGGCA+AGG | + | chr3_4:58962445-58962464 | Msa0510120:CDS | 40.0% | |
| ! | TTTTGCAACCTTGCCTTTTC+TGG | - | chr3_4:58962456-58962475 | None:intergenic | 40.0% |
| !! | CCGTAAATTGGTTGGTGAAA+TGG | - | chr3_4:58962536-58962555 | None:intergenic | 40.0% |
| TTTGTGGACCGTAAATTGGT+TGG | - | chr3_4:58962544-58962563 | None:intergenic | 40.0% | |
| TCAAGTCCTACATCGTTGTT+TGG | - | chr3_4:58962584-58962603 | None:intergenic | 40.0% | |
| AACAACGATGTAGGACTTGA+TGG | + | chr3_4:58962584-58962603 | Msa0510120:CDS | 40.0% | |
| !! | GCAACAAACCCTTTTGGAAA+TGG | + | chr3_4:58962644-58962663 | Msa0510120:CDS | 40.0% |
| TGTCCTGGTGTTTATGGTAA+AGG | + | chr3_4:58962713-58962732 | Msa0510120:CDS | 40.0% | |
| GTAGAAGGATCATACAAAGC+AGG | - | chr3_4:58962833-58962852 | None:intergenic | 40.0% | |
| !! | GAGCATTGAGGATTCTAGAT+TGG | + | chr3_4:58963161-58963180 | Msa0510120:intron | 40.0% |
| TAGGTATTCCAATTCCCACT+TGG | - | chr3_4:58963250-58963269 | None:intergenic | 40.0% | |
| !! | GTGTTTTTGATGCCAAAGTG+AGG | + | chr3_4:58963351-58963370 | Msa0510120:intron | 40.0% |
| TTGATCACTACTTGTCCAAG+TGG | - | chr3_4:58963403-58963422 | None:intergenic | 40.0% | |
| TTCATCTTCTCTTTCAAGGC+AGG | + | chr3_4:58963425-58963444 | Msa0510120:intron | 40.0% | |
| TCATCTTCTCTTTCAAGGCA+GGG | + | chr3_4:58963426-58963445 | Msa0510120:intron | 40.0% | |
| GACGGATGGAATACGTTAAT+AGG | + | chr3_4:58963798-58963817 | Msa0510120:intron | 40.0% | |
| CAAGAATATTGTCCCGAAAG+GGG | - | chr3_4:58963861-58963880 | None:intergenic | 40.0% | |
| GGTGGTTGTTAGATCAAAGT+CGG | - | chr3_4:58964612-58964631 | None:intergenic | 40.0% | |
| TACATACGATCACATGTTGG+TGG | - | chr3_4:58964630-58964649 | None:intergenic | 40.0% | |
| TGTAATCAATCAAGGTGTGG+CGG | - | chr3_4:58964762-58964781 | None:intergenic | 40.0% | |
| TGGTGTAATCAATCAAGGTG+TGG | - | chr3_4:58964765-58964784 | None:intergenic | 40.0% | |
| !! | GTTGGTGGTGTAATCAATCA+AGG | - | chr3_4:58964770-58964789 | None:intergenic | 40.0% |
| GTTGAACATGATTCTCCTTC+AGG | + | chr3_4:58964898-58964917 | Msa0510120:intron | 40.0% | |
| AACATTGGGATGTCTACTAG+AGG | + | chr3_4:58965023-58965042 | Msa0510120:intron | 40.0% | |
| ATCCTTATCCAACAGCTTCA+CGG | - | chr3_4:58965164-58965183 | None:intergenic | 40.0% | |
| GGTGACAACAATACCTGAAT+AGG | + | chr3_4:58965418-58965437 | Msa0510120:intron | 40.0% | |
| TACCTCTATAAGTGCCCTTT+GGG | - | chr3_4:58965900-58965919 | None:intergenic | 40.0% | |
| TAGCCAGCTAATTGCAAACA+CGG | - | chr3_4:58966167-58966186 | None:intergenic | 40.0% | |
| ! | AAGGAAGAGAGTGCATAAGT+GGG | - | chr3_4:58966387-58966406 | None:intergenic | 40.0% |
| ! | AAAGGAAGAGAGTGCATAAG+TGG | - | chr3_4:58966388-58966407 | None:intergenic | 40.0% |
| GGAAAAAGAAACGTGGTTGA+TGG | - | chr3_4:58966473-58966492 | None:intergenic | 40.0% | |
| ! | AGATTTTTCCGGTGAGAAGA+GGG | - | chr3_4:58966686-58966705 | None:intergenic | 40.0% |
| ACCGTACCATATGAGATTGA+TGG | - | chr3_4:58966709-58966728 | None:intergenic | 40.0% | |
| CGAATGAGTAATTCTCGTCA+AGG | - | chr3_4:58966896-58966915 | None:intergenic | 40.0% | |
| CCCACAGGTAAGCAAATTTA+TGG | - | chr3_4:58967064-58967083 | None:intergenic | 40.0% | |
| ! | TAAATTTGCTTACCTGTGGG+TGG | + | chr3_4:58967064-58967083 | Msa0510120:CDS | 40.0% |
| ! | AAATTTGCTTACCTGTGGGT+GGG | + | chr3_4:58967065-58967084 | Msa0510120:CDS | 40.0% |
| AATTCAGAGACACAATGTCC+AGG | + | chr3_4:58967089-58967108 | Msa0510120:CDS | 40.0% | |
| CCCTTTCACCAACCTATTTA+TGG | + | chr3_4:58967125-58967144 | Msa0510120:CDS | 40.0% | |
| !! | CCCATAAATAGGTTGGTGAA+AGG | - | chr3_4:58967129-58967148 | None:intergenic | 40.0% |
| ! | TTTGAGGCCCATAAATAGGT+TGG | - | chr3_4:58967136-58967155 | None:intergenic | 40.0% |
| !! | TATTTGGTGCAACTAACGGT+GGG | - | chr3_4:58967160-58967179 | None:intergenic | 40.0% |
| !! | TTATTTGGTGCAACTAACGG+TGG | - | chr3_4:58967161-58967180 | None:intergenic | 40.0% |
| AGTTGCACCAAATAACGATG+TGG | + | chr3_4:58967166-58967185 | Msa0510120:CDS | 40.0% | |
| GTTGCACCAAATAACGATGT+GGG | + | chr3_4:58967167-58967186 | Msa0510120:CDS | 40.0% | |
| GTGACGAATCCATTTGGAAA+TGG | + | chr3_4:58967236-58967255 | Msa0510120:CDS | 40.0% | |
| ! | TTATAACTTGCACCGCTTGT+TGG | - | chr3_4:58967368-58967387 | None:intergenic | 40.0% |
| GGTGCAAGTTATAACGCTAA+CGG | + | chr3_4:58967374-58967393 | Msa0510120:CDS | 40.0% | |
| TACTAGAGTAGAACAAACCG+AGG | - | chr3_4:58967447-58967466 | None:intergenic | 40.0% | |
| !! | CATAGAGTAATGGACCGTTG+TGG | - | chr3_4:58962049-58962068 | None:intergenic | 45.0% |
| CACAACGGTCCATTACTCTA+TGG | + | chr3_4:58962047-58962066 | Msa0510120:CDS | 45.0% | |
| ! | GCTGAAACTGAAGGTTGGTT+TGG | - | chr3_4:58962173-58962192 | None:intergenic | 45.0% |
| ACCAACCTTCAGTTTCAGCA+TGG | + | chr3_4:58962174-58962193 | Msa0510120:CDS | 45.0% | |
| ACCATGCTGAAACTGAAGGT+TGG | - | chr3_4:58962178-58962197 | None:intergenic | 45.0% | |
| AACCTTCAGTTTCAGCATGG+TGG | + | chr3_4:58962177-58962196 | Msa0510120:CDS | 45.0% | |
| TTCCACCATGCTGAAACTGA+AGG | - | chr3_4:58962182-58962201 | None:intergenic | 45.0% | |
| ! | CGTTTTTGTATGGACCGATG+TGG | + | chr3_4:58962401-58962420 | Msa0510120:CDS | 45.0% |
| AACTCAGAAACACAGTGTCC+AGG | + | chr3_4:58962497-58962516 | Msa0510120:CDS | 45.0% | |
| ACTCAGAAACACAGTGTCCA+GGG | + | chr3_4:58962498-58962517 | Msa0510120:CDS | 45.0% | |
| !! | TCGTTGTTTGGTGCAACCAA+TGG | - | chr3_4:58962572-58962591 | None:intergenic | 45.0% |
| GTTGCACCAAACAACGATGT+AGG | + | chr3_4:58962575-58962594 | Msa0510120:CDS | 45.0% | |
| CGATGTAGGACTTGATGGAA+TGG | + | chr3_4:58962589-58962608 | Msa0510120:CDS | 45.0% | |
| ! | GGAACAGCAACAAACCCTTT+TGG | + | chr3_4:58962638-58962657 | Msa0510120:CDS | 45.0% |
| TCAGCTTGTCCTGGTGTTTA+TGG | + | chr3_4:58962707-58962726 | Msa0510120:CDS | 45.0% | |
| GCACCTTTACCATAAACACC+AGG | - | chr3_4:58962719-58962738 | None:intergenic | 45.0% | |
| !! | TATGGTAAAGGTGCTTACCC+TGG | + | chr3_4:58962725-58962744 | Msa0510120:CDS | 45.0% |
| GCAAATCACCAGCATAACCA+GGG | - | chr3_4:58962745-58962764 | None:intergenic | 45.0% | |
| AGCAAATCACCAGCATAACC+AGG | - | chr3_4:58962746-58962765 | None:intergenic | 45.0% | |
| ! | GGTGCTAGTTTCAATGCTCA+TGG | + | chr3_4:58962782-58962801 | Msa0510120:CDS | 45.0% |
| ACATTCTTCTACACTGCCAG+TGG | - | chr3_4:58962903-58962922 | None:intergenic | 45.0% | |
| TGTTTGTTTGTGGGGTTGAG+AGG | + | chr3_4:58963112-58963131 | Msa0510120:intron | 45.0% | |
| !!! | AGTTTTGGGACAGAGCATTG+AGG | + | chr3_4:58963149-58963168 | Msa0510120:intron | 45.0% |
| TGTTTGGTCCAAGTGGGAAT+TGG | + | chr3_4:58963239-58963258 | Msa0510120:intron | 45.0% | |
| TGCTTCGAGATTCCTCACTT+TGG | - | chr3_4:58963366-58963385 | None:intergenic | 45.0% | |
| AATGGTCATCTATTGCGGGA+CGG | + | chr3_4:58963780-58963799 | Msa0510120:intron | 45.0% | |
| ATATCCCCTAACTCCCCTTT+CGG | + | chr3_4:58963845-58963864 | Msa0510120:intron | 45.0% | |
| GTAATCAATCAAGGTGTGGC+GGG | - | chr3_4:58964761-58964780 | None:intergenic | 45.0% | |
| GATGTTCTGCTATCAGCTTG+AGG | + | chr3_4:58964978-58964997 | Msa0510120:intron | 45.0% | |
| TCCTTATCCAACAGCTTCAC+GGG | - | chr3_4:58965163-58965182 | None:intergenic | 45.0% | |
| ACTTTCACCATCCTTTCCCT+CGG | + | chr3_4:58965479-58965498 | Msa0510120:intron | 45.0% | |
| TTTCCCTCGGTTTACCTCAA+GGG | + | chr3_4:58965492-58965511 | Msa0510120:intron | 45.0% | |
| TTTCCCTTGAGGTAAACCGA+GGG | - | chr3_4:58965498-58965517 | None:intergenic | 45.0% | |
| ! | TTTTCCCTTGAGGTAAACCG+AGG | - | chr3_4:58965499-58965518 | None:intergenic | 45.0% |
| TCAAGAAGGAATCATGTCGC+CGG | + | chr3_4:58965678-58965697 | Msa0510120:intron | 45.0% | |
| AAAGTTTAGGTGGATGGCTC+CGG | + | chr3_4:58965844-58965863 | Msa0510120:intron | 45.0% | |
| GTACCTCTATAAGTGCCCTT+TGG | - | chr3_4:58965901-58965920 | None:intergenic | 45.0% | |
| !! | GATGTAAAGACGGTGTTGGT+GGG | - | chr3_4:58965934-58965953 | None:intergenic | 45.0% |
| CACCAACACCGTCTTTACAT+CGG | + | chr3_4:58965933-58965952 | Msa0510120:intron | 45.0% | |
| ATCGAACACACAACCTTCTG+AGG | + | chr3_4:58965964-58965983 | Msa0510120:intron | 45.0% | |
| TCGAACACACAACCTTCTGA+GGG | + | chr3_4:58965965-58965984 | Msa0510120:intron | 45.0% | |
| !! | TTGGCTCAGTTGGTAAGGAA+CGG | - | chr3_4:58965999-58966018 | None:intergenic | 45.0% |
| CGGTCAATGTGTATGAGACA+AGG | - | chr3_4:58966147-58966166 | None:intergenic | 45.0% | |
| TGACCGTGTTTGCAATTAGC+TGG | + | chr3_4:58966161-58966180 | Msa0510120:intron | 45.0% | |
| AAGCAACGCGTTATCAAGCT+TGG | + | chr3_4:58966292-58966311 | Msa0510120:intron | 45.0% | |
| ! | TGCACTCTCTTCCTTTTAGG+AGG | + | chr3_4:58966392-58966411 | Msa0510120:intron | 45.0% |
| GTAGGAAAGAGCCTCCTAAA+AGG | - | chr3_4:58966406-58966425 | None:intergenic | 45.0% | |
| TTCTTGCTGCTGAGCTCAAA+TGG | - | chr3_4:58966617-58966636 | None:intergenic | 45.0% | |
| ! | GAGATTTTTCCGGTGAGAAG+AGG | - | chr3_4:58966687-58966706 | None:intergenic | 45.0% |
| ATCGGAGATTATGGCACGTT+GGG | - | chr3_4:58966745-58966764 | None:intergenic | 45.0% | |
| AATCGGAGATTATGGCACGT+TGG | - | chr3_4:58966746-58966765 | None:intergenic | 45.0% | |
| TAATTTCCACCACGTAGCGA+CGG | - | chr3_4:58966811-58966830 | None:intergenic | 45.0% | |
| ! | CGCTACGTGGTGGAAATTAA+CGG | + | chr3_4:58966812-58966831 | Msa0510120:CDS | 45.0% |
| AAAGACAAACGCCATCAACG+TGG | + | chr3_4:58966965-58966984 | Msa0510120:CDS | 45.0% | |
| CATCAACGTGGTTCTCACTT+CGG | + | chr3_4:58966977-58966996 | Msa0510120:CDS | 45.0% | |
| ! | GGTTTTGCTCCAGTAGATGT+GGG | + | chr3_4:58967018-58967037 | Msa0510120:CDS | 45.0% |
| TCAAGGCCCACATCGTTATT+TGG | - | chr3_4:58967176-58967195 | None:intergenic | 45.0% | |
| AATAACGATGTGGGCCTTGA+CGG | + | chr3_4:58967176-58967195 | Msa0510120:CDS | 45.0% | |
| !! | AACGTGGCTAGTTTATTGGC+TGG | + | chr3_4:58967209-58967228 | Msa0510120:CDS | 45.0% |
| !! | ACGTGGCTAGTTTATTGGCT+GGG | + | chr3_4:58967210-58967229 | Msa0510120:CDS | 45.0% |
| !! | CTTCAAGAGGTGCTTCTTTG+GGG | - | chr3_4:58967274-58967293 | None:intergenic | 45.0% |
| !! | GCTTCAAGAGGTGCTTCTTT+GGG | - | chr3_4:58967275-58967294 | None:intergenic | 45.0% |
| !! | AGCTTCAAGAGGTGCTTCTT+TGG | - | chr3_4:58967276-58967295 | None:intergenic | 45.0% |
| !! | AAAGAAGCACCTCTTGAAGC+TGG | + | chr3_4:58967275-58967294 | Msa0510120:CDS | 45.0% |
| TGTACTGGAGAGTTCGGTAA+AGG | + | chr3_4:58967305-58967324 | Msa0510120:CDS | 45.0% | |
| GTACTGGAGAGTTCGGTAAA+GGG | + | chr3_4:58967306-58967325 | Msa0510120:CDS | 45.0% | |
| TACTGGAGAGTTCGGTAAAG+GGG | + | chr3_4:58967307-58967326 | Msa0510120:CDS | 45.0% | |
| TATAACGCTAACGGCGTCAA+TGG | + | chr3_4:58967383-58967402 | Msa0510120:CDS | 45.0% | |
| TAGAACAAACCGAGGTTGTC+GGG | - | chr3_4:58967439-58967458 | None:intergenic | 45.0% | |
| GTAGAACAAACCGAGGTTGT+CGG | - | chr3_4:58967440-58967459 | None:intergenic | 45.0% | |
| !! | TTAATTTATGTTAAAAAAAA+AGG | - | chr3_4:58965781-58965800 | None:intergenic | 5.0% |
| !!! | TTTTTTAACATAAATTAAAA+CGG | + | chr3_4:58965783-58965802 | Msa0510120:intron | 5.0% |
| AAGAACCGTGTGTGCCACAT+CGG | - | chr3_4:58962418-58962437 | None:intergenic | 50.0% | |
| AGTGTCCAGGGTTATGTGCT+TGG | + | chr3_4:58962510-58962529 | Msa0510120:CDS | 50.0% | |
| AATGGCCAAGCACATAACCC+TGG | - | chr3_4:58962518-58962537 | None:intergenic | 50.0% | |
| GCGCTTTGTGGACCGTAAAT+TGG | - | chr3_4:58962548-58962567 | None:intergenic | 50.0% | |
| !! | GCTTCAAGAGGTGCTTCAGA+AGG | - | chr3_4:58962683-58962702 | None:intergenic | 50.0% |
| CAAGCTGAAGCAGCTTCAAG+AGG | - | chr3_4:58962695-58962714 | None:intergenic | 50.0% | |
| TATCCCCTAACTCCCCTTTC+GGG | + | chr3_4:58963846-58963865 | Msa0510120:intron | 50.0% | |
| TTGTCCCGAAAGGGGAGTTA+GGG | - | chr3_4:58963853-58963872 | None:intergenic | 50.0% | |
| ATTGTCCCGAAAGGGGAGTT+AGG | - | chr3_4:58963854-58963873 | None:intergenic | 50.0% | |
| TAATGAGCCCGTGAAGCTGT+TGG | + | chr3_4:58965153-58965172 | Msa0510120:intron | 50.0% | |
| AGGTAAACCGAGGGAAAGGA+TGG | - | chr3_4:58965489-58965508 | None:intergenic | 50.0% | |
| CTTGAGGTAAACCGAGGGAA+AGG | - | chr3_4:58965493-58965512 | None:intergenic | 50.0% | |
| CTTTCCCTCGGTTTACCTCA+AGG | + | chr3_4:58965491-58965510 | Msa0510120:intron | 50.0% | |
| ! | CGATGTAAAGACGGTGTTGG+TGG | - | chr3_4:58965935-58965954 | None:intergenic | 50.0% |
| TGCCGATGTAAAGACGGTGT+TGG | - | chr3_4:58965938-58965957 | None:intergenic | 50.0% | |
| !! | TGGCTCAGTTGGTAAGGAAC+GGG | - | chr3_4:58965998-58966017 | None:intergenic | 50.0% |
| !! | ACACGTTGGCTCAGTTGGTA+AGG | - | chr3_4:58966004-58966023 | None:intergenic | 50.0% |
| !! | GAAACACACGTTGGCTCAGT+TGG | - | chr3_4:58966009-58966028 | None:intergenic | 50.0% |
| CAACGCGTTATCAAGCTTGG+TGG | + | chr3_4:58966295-58966314 | Msa0510120:intron | 50.0% | |
| GAAGAGGGCCTTTGTGGTAT+TGG | - | chr3_4:58966671-58966690 | None:intergenic | 50.0% | |
| GAGATTATGGCACGTTGGGT+AGG | - | chr3_4:58966741-58966760 | None:intergenic | 50.0% | |
| ! | GATGACTGGGGTTTGATGGT+GGG | - | chr3_4:58966789-58966808 | None:intergenic | 50.0% |
| !! | GGTTTTGTGAGTTGGCGAGA+TGG | - | chr3_4:58966848-58966867 | None:intergenic | 50.0% |
| !! | GAGCACGAGGTTTTGTGAGT+TGG | - | chr3_4:58966856-58966875 | None:intergenic | 50.0% |
| CAAAACCTCGTGCTCACAAG+AGG | + | chr3_4:58966861-58966880 | Msa0510120:CDS | 50.0% | |
| CGAAGTGAGAACCACGTTGA+TGG | - | chr3_4:58966979-58966998 | None:intergenic | 50.0% | |
| ! | GGGTTTTGCTCCAGTAGATG+TGG | + | chr3_4:58967017-58967036 | Msa0510120:CDS | 50.0% |
| TCCAGTAGATGTGGGACACA+CGG | + | chr3_4:58967026-58967045 | Msa0510120:CDS | 50.0% | |
| TCTCTGAATTACCCACCCAC+AGG | - | chr3_4:58967079-58967098 | None:intergenic | 50.0% | |
| AATGTCCAGGTCAATGCGCA+TGG | + | chr3_4:58967102-58967121 | Msa0510120:CDS | 50.0% | |
| !! | GGGCTTTGAGGCCCATAAAT+AGG | - | chr3_4:58967140-58967159 | None:intergenic | 50.0% |
| CGTTAATCACCATGCCGTCA+AGG | - | chr3_4:58967193-58967212 | None:intergenic | 50.0% | |
| TGACGGCATGGTGATTAACG+TGG | + | chr3_4:58967193-58967212 | Msa0510120:CDS | 50.0% | |
| !! | CGTGGCTAGTTTATTGGCTG+GGG | + | chr3_4:58967211-58967230 | Msa0510120:CDS | 50.0% |
| AGCACCTCTTGAAGCTGGTT+CGG | + | chr3_4:58967280-58967299 | Msa0510120:CDS | 50.0% | |
| ! | TCGGCTTGTACTGGAGAGTT+CGG | + | chr3_4:58967299-58967318 | Msa0510120:CDS | 50.0% |
| ! | CTCTTGGTGGATCCAACAAG+CGG | + | chr3_4:58967353-58967372 | Msa0510120:CDS | 50.0% |
| ACTCTTTGACCCGACAACCT+CGG | + | chr3_4:58967427-58967446 | Msa0510120:CDS | 50.0% | |
| ATGGACCGATGTGGCACACA+CGG | + | chr3_4:58962410-58962429 | Msa0510120:CDS | 55.0% | |
| GCAACCAATGGTGCGCTTTG+TGG | - | chr3_4:58962560-58962579 | None:intergenic | 55.0% | |
| GAAGCTGCTTCAGCTTGTCC+TGG | + | chr3_4:58962698-58962717 | Msa0510120:CDS | 55.0% | |
| GGTGCTTACCCTGGTTATGC+TGG | + | chr3_4:58962734-58962753 | Msa0510120:CDS | 55.0% | |
| GTCATCTATTGCGGGACGGA+TGG | + | chr3_4:58963784-58963803 | Msa0510120:intron | 55.0% | |
| TGTCCCGAAAGGGGAGTTAG+GGG | - | chr3_4:58963852-58963871 | None:intergenic | 55.0% | |
| GCCCGTGAAGCTGTTGGATA+AGG | + | chr3_4:58965159-58965178 | Msa0510120:intron | 55.0% | |
| !! | GGCCCAAAGGGCACTTATAG+AGG | + | chr3_4:58965895-58965914 | Msa0510120:intron | 55.0% |
| CACCGTCTTTACATCGGCAG+CGG | + | chr3_4:58965939-58965958 | Msa0510120:intron | 55.0% | |
| ACCGTCTTTACATCGGCAGC+GGG | + | chr3_4:58965940-58965959 | Msa0510120:intron | 55.0% | |
| TCCCGCTGCCGATGTAAAGA+CGG | - | chr3_4:58965944-58965963 | None:intergenic | 55.0% | |
| ! | ACGGGTCACTTTCCCTCAGA+AGG | - | chr3_4:58965980-58965999 | None:intergenic | 55.0% |
| ! | CAAGCTTGGTGGTACCTCAC+TGG | + | chr3_4:58966306-58966325 | Msa0510120:intron | 55.0% |
| GACTAGAGAGTGAGCCAGTG+AGG | - | chr3_4:58966323-58966342 | None:intergenic | 55.0% | |
| CACAAAGGCCCTCTTCTCAC+CGG | + | chr3_4:58966675-58966694 | Msa0510120:CDS | 55.0% | |
| GGATGACTGGGGTTTGATGG+TGG | - | chr3_4:58966790-58966809 | None:intergenic | 55.0% | |
| GACGGATGACTGGGGTTTGA+TGG | - | chr3_4:58966793-58966812 | None:intergenic | 55.0% | |
| GTGAACCTCTTGTGAGCACG+AGG | - | chr3_4:58966869-58966888 | None:intergenic | 55.0% | |
| GGCGTTTGTCTTTGAGCCCT+TGG | - | chr3_4:58966958-58966977 | None:intergenic | 55.0% | |
| TCGGCTGACGTGGTAGTTGA+TGG | + | chr3_4:58966996-58967015 | Msa0510120:CDS | 55.0% | |
| CGGCTGACGTGGTAGTTGAT+GGG | + | chr3_4:58966997-58967016 | Msa0510120:CDS | 55.0% | |
| ACCGTGTGTCCCACATCTAC+TGG | - | chr3_4:58967030-58967049 | None:intergenic | 55.0% | |
| ! | GCAACTAACGGTGGGCTTTG+AGG | - | chr3_4:58967152-58967171 | None:intergenic | 55.0% |
| GGGGTCGTGACGAATCCATT+TGG | + | chr3_4:58967230-58967249 | Msa0510120:CDS | 55.0% | |
| CAAGCCGAACCAGCTTCAAG+AGG | - | chr3_4:58967287-58967306 | None:intergenic | 55.0% | |
| !! | GAAGCTGGTTCGGCTTGTAC+TGG | + | chr3_4:58967290-58967309 | Msa0510120:CDS | 55.0% |
| TTCGGTAAAGGGGCTTACCC+TGG | + | chr3_4:58967317-58967336 | Msa0510120:CDS | 55.0% | |
| ! | CGCTTGTTGGATCCACCAAG+AGG | - | chr3_4:58967355-58967374 | None:intergenic | 55.0% |
| ACGCTAACGGCGTCAATGGA+AGG | + | chr3_4:58967387-58967406 | Msa0510120:CDS | 55.0% | |
| ! | GTTGTCGGGTCAAAGAGTGC+GGG | - | chr3_4:58967425-58967444 | None:intergenic | 55.0% |
| GGTTGTCGGGTCAAAGAGTG+CGG | - | chr3_4:58967426-58967445 | None:intergenic | 55.0% | |
| CGGTCCACAAAGCGCACCAT+TGG | + | chr3_4:58962553-58962572 | Msa0510120:CDS | 60.0% | |
| TAAGTGCCCTTTGGGCCCAG+AGG | - | chr3_4:58965892-58965911 | None:intergenic | 60.0% | |
| CGGTGAGAAGAGGGCCTTTG+TGG | - | chr3_4:58966677-58966696 | None:intergenic | 60.0% | |
| !! | CTGGGGTTTGATGGTGGGTG+AGG | - | chr3_4:58966784-58966803 | None:intergenic | 60.0% |
| CACGTAGCGACGGATGACTG+GGG | - | chr3_4:58966801-58966820 | None:intergenic | 60.0% | |
| CCACGTAGCGACGGATGACT+GGG | - | chr3_4:58966802-58966821 | None:intergenic | 60.0% | |
| ACCACGTAGCGACGGATGAC+TGG | - | chr3_4:58966803-58966822 | None:intergenic | 60.0% | |
| AGTCATCCGTCGCTACGTGG+TGG | + | chr3_4:58966802-58966821 | Msa0510120:CDS | 60.0% | |
| GGTTCTCACTTCGGCTGACG+TGG | + | chr3_4:58966986-58967005 | Msa0510120:CDS | 60.0% | |
| ! | AAGGGCCATGCGCATTGACC+TGG | - | chr3_4:58967110-58967129 | None:intergenic | 60.0% |
| AGAGGTTCCCAGCGTAGCCA+GGG | - | chr3_4:58967337-58967356 | None:intergenic | 60.0% | |
| AAGAGGTTCCCAGCGTAGCC+AGG | - | chr3_4:58967338-58967357 | None:intergenic | 60.0% | |
| TGGCTACGCTGGGAACCTCT+TGG | + | chr3_4:58967337-58967356 | Msa0510120:CDS | 60.0% | |
| CTACGCTGGGAACCTCTTGG+TGG | + | chr3_4:58967340-58967359 | Msa0510120:CDS | 60.0% | |
| GATGGCTCCGGTCACCACCA+GGG | + | chr3_4:58965856-58965875 | Msa0510120:intron | 65.0% | |
| TCCGGTCACCACCAGGGTCA+GGG | + | chr3_4:58965862-58965881 | Msa0510120:intron | 65.0% | |
| CCCAGTCATCCGTCGCTACG+TGG | + | chr3_4:58966799-58966818 | Msa0510120:CDS | 65.0% | |
| CGATGTGGGCCTTGACGGCA+TGG | + | chr3_4:58967181-58967200 | Msa0510120:CDS | 65.0% | |
| GGGCTTACCCTGGCTACGCT+GGG | + | chr3_4:58967327-58967346 | Msa0510120:CDS | 65.0% | |
| GGATGGCTCCGGTCACCACC+AGG | + | chr3_4:58965855-58965874 | Msa0510120:intron | 70.0% | |
| CTCCGGTCACCACCAGGGTC+AGG | + | chr3_4:58965861-58965880 | Msa0510120:intron | 70.0% | |
| ! | GCCCTGACCCTGGTGGTGAC+CGG | - | chr3_4:58965866-58965885 | None:intergenic | 70.0% |
| GTCACCACCAGGGTCAGGGC+AGG | + | chr3_4:58965866-58965885 | Msa0510120:intron | 70.0% | |
| CAGGGTCAGGGCAGGCCTCT+GGG | + | chr3_4:58965874-58965893 | Msa0510120:intron | 70.0% | |
| GGCAGGCCTCTGGGCCCAAA+GGG | + | chr3_4:58965883-58965902 | Msa0510120:intron | 70.0% | |
| GGGGCTTACCCTGGCTACGC+TGG | + | chr3_4:58967326-58967345 | Msa0510120:CDS | 70.0% | |
| GAGGCCTGCCCTGACCCTGG+TGG | - | chr3_4:58965873-58965892 | None:intergenic | 75.0% | |
| CCAGAGGCCTGCCCTGACCC+TGG | - | chr3_4:58965876-58965895 | None:intergenic | 75.0% | |
| CCAGGGTCAGGGCAGGCCTC+TGG | + | chr3_4:58965873-58965892 | Msa0510120:intron | 75.0% | |
| GGGCAGGCCTCTGGGCCCAA+AGG | + | chr3_4:58965882-58965901 | Msa0510120:intron | 75.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr3_4 | gene | 58961996 | 58967469 | 58961996 | ID=Msa0510120;Name=Msa0510120 |
| chr3_4 | mRNA | 58961996 | 58967469 | 58961996 | ID=Msa0510120-mRNA-1;Parent=Msa0510120;Name=Msa0510120-mRNA-1;_AED=0.06;_eAED=0.07;_QI=0|0|0|1|0|0|2|0|644 |
| chr3_4 | exon | 58961996 | 58962871 | 58961996 | ID=Msa0510120-mRNA-1:exon:13720;Parent=Msa0510120-mRNA-1 |
| chr3_4 | exon | 58966411 | 58967469 | 58966411 | ID=Msa0510120-mRNA-1:exon:13721;Parent=Msa0510120-mRNA-1 |
| chr3_4 | CDS | 58961996 | 58962871 | 58961996 | ID=Msa0510120-mRNA-1:cds;Parent=Msa0510120-mRNA-1 |
| chr3_4 | CDS | 58966411 | 58967469 | 58966411 | ID=Msa0510120-mRNA-1:cds;Parent=Msa0510120-mRNA-1 |
| Gene Sequence |
| Protein sequence |
