AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa1430440

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa1430440 MtrunA17_Chr3g0121101 88.889 936 39 6 1 897 1 910 0.0 1602
Msa1430440 MtrunA17_Chr5g0440631 56.333 900 329 10 34 896 35 907 0.0 987
Msa1430440 MtrunA17_Chr3g0118281 54.423 893 340 10 40 896 130 991 0.0 962
Msa1430440 MtrunA17_Chr5g0440641 54.596 892 341 12 34 896 35 891 0.0 935
Msa1430440 MtrunA17_Chr6g0467081 53.803 894 341 12 40 896 40 898 0.0 919
Msa1430440 MtrunA17_Chr3g0080331 54.428 621 259 8 219 832 21 624 0.0 686
Msa1430440 MtrunA17_Chr6g0481121 35.520 884 451 25 92 897 267 1109 4.02e-144 455
Msa1430440 MtrunA17_Chr2g0308031 35.301 864 461 24 92 897 92 915 1.00e-141 444
Msa1430440 MtrunA17_Chr1g0166341 35.543 875 452 29 92 897 148 979 8.75e-141 443
Msa1430440 MtrunA17_Chr4g0062941 34.061 916 480 27 41 897 26 876 9.67e-140 437
Msa1430440 MtrunA17_Chr1g0204551 34.585 879 459 28 92 897 143 978 8.58e-137 432
Msa1430440 MtrunA17_Chr4g0027691 33.449 867 480 25 95 897 138 971 5.88e-133 422
Msa1430440 MtrunA17_Chr4g0027701 31.689 912 505 25 42 897 159 1008 2.55e-126 405
Msa1430440 MtrunA17_Chr5g0418071 31.412 850 492 25 109 897 197 1016 1.05e-107 356
Msa1430440 MtrunA17_Chr4g0043461 29.577 781 446 27 134 859 194 925 2.02e-78 275
Msa1430440 MtrunA17_Chr2g0291701 28.373 793 436 32 190 896 282 1028 7.82e-72 256
Msa1430440 MtrunA17_Chr3g0080321 40.306 196 88 5 40 235 21 187 3.24e-32 124
Msa1430440 MtrunA17_Chr7g0268301 44.681 94 38 1 486 579 2 81 3.25e-17 78.6
Msa1430440 MtrunA17_Chr6g0464401 47.692 65 34 0 599 663 8 72 6.79e-12 63.5
Msa1430440 MtrunA17_Chr7g0268311 40.230 87 42 2 318 404 26 102 2.31e-11 61.2
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa1430440 AT2G32940.1 57.735 892 309 10 37 897 24 878 0.0 993
Msa1430440 AT2G27040.1 52.713 903 361 11 31 897 52 924 0.0 926
Msa1430440 AT2G27040.2 52.713 903 361 11 31 897 52 924 0.0 926
Msa1430440 AT5G21150.1 52.049 903 369 12 28 897 25 896 0.0 915
Msa1430440 AT5G21030.2 47.186 924 374 19 15 897 4 854 0.0 787
Msa1430440 AT5G21030.1 47.478 912 366 19 27 897 11 850 0.0 779
Msa1430440 AT1G48410.1 34.274 957 460 28 31 897 171 1048 5.59e-142 448
Msa1430440 AT1G48410.3 34.238 958 461 28 31 897 171 1050 5.85e-142 448
Msa1430440 AT1G48410.2 34.238 958 461 28 31 897 171 1050 5.85e-142 448
Msa1430440 AT5G43810.4 34.237 885 450 29 92 897 157 988 1.15e-135 430
Msa1430440 AT5G43810.1 34.237 885 450 29 92 897 157 988 1.15e-135 430
Msa1430440 AT5G43810.2 34.237 885 450 29 92 897 157 988 1.15e-135 430
Msa1430440 AT5G43810.3 34.237 885 450 29 92 897 157 988 1.15e-135 430
Msa1430440 AT2G27880.1 33.718 952 474 33 24 897 125 997 5.30e-132 421
Msa1430440 AT1G69440.1 31.015 906 498 27 46 897 158 990 3.02e-102 341
Msa1430440 AT1G31290.3 31.707 779 437 25 134 859 333 1069 7.77e-86 298
Msa1430440 AT1G31290.2 31.707 779 437 25 134 859 371 1107 1.24e-85 298
Msa1430440 AT1G31290.1 31.707 779 437 25 134 859 407 1143 1.62e-85 298
Msa1430440 AT1G31280.1 30.496 787 428 27 134 859 235 963 7.97e-84 291

Find 230 sgRNAs with CRISPR-Local

Find 539 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
AACCAAGAATTCAAAATTTA+TGG 0.067326 tig0026659:-21194 Msa1430440:CDS
TCATTGCAATTTCCCTTATT+TGG 0.114017 tig0026659:-22315 Msa1430440:CDS
TCCATTGTTCTTTCCCTTAA+AGG 0.138733 tig0026659:-21860 Msa1430440:CDS
CATATGACTCGATCCCTTTA+AGG 0.150762 tig0026659:+21846 None:intergenic
CTTTCGTGGTTTCACTATTT+TGG 0.160444 tig0026659:-15038 Msa1430440:three_prime_UTR
GTCAGTTGAGGGCATATTTA+AGG 0.164071 tig0026659:-14894 Msa1430440:three_prime_UTR
TTACAGGCTATTGGAAATTA+TGG 0.175853 tig0026659:-20523 Msa1430440:intron
AATGGACTGCAAGGGTATTT+TGG 0.214443 tig0026659:+21877 None:intergenic
TTGCTGTCATCTAAACTTAA+TGG 0.226920 tig0026659:-19794 Msa1430440:CDS
GAATGAGAAGTGAATTATTT+TGG 0.227566 tig0026659:-15001 Msa1430440:three_prime_UTR
AATTAAAGTGTAAATATCTA+TGG 0.229487 tig0026659:-15262 Msa1430440:three_prime_UTR
ATAGATATTTACACTTTAAT+TGG 0.243083 tig0026659:+15264 None:intergenic
GGGAGGATTGTCTCTTAATA+TGG 0.249429 tig0026659:-21527 Msa1430440:CDS
AGCCATCAGATATTGGTTAT+TGG 0.253396 tig0026659:-20081 Msa1430440:CDS
CAGTAAGCCAAAGCCAAATA+AGG 0.259318 tig0026659:+22302 None:intergenic
ACATACATTATACTGGAAAA+AGG 0.260122 tig0026659:+22350 None:intergenic
TGCACACAACCTTTATTATC+TGG 0.271589 tig0026659:+16329 None:intergenic
AACCTCATCAATATGTTTAT+AGG 0.277854 tig0026659:+16178 None:intergenic
CAATTTCCCTTATTTGGCTT+TGG 0.281471 tig0026659:-22309 Msa1430440:CDS
CATTAAGATTTACAGGCTAT+TGG 0.284179 tig0026659:-20532 Msa1430440:intron
TTGAACTCAAATTTATTATC+TGG 0.285094 tig0026659:+22114 None:intergenic
AAAATTCCACCTTCCATTAC+TGG 0.289479 tig0026659:+20232 None:intergenic
TCAGGAGAAAACTGATTAAT+AGG 0.290755 tig0026659:-22221 Msa1430440:CDS
TCCTCCTCTAATAAAGTAAA+TGG 0.290968 tig0026659:+19869 None:intergenic
ATTACCACAATCATGGTAAT+AGG 0.311376 tig0026659:+15167 None:intergenic
AAGAGCTTCCAAAGTTGAAT+TGG 0.314384 tig0026659:-15345 Msa1430440:CDS
CTTTGTAAATTTCAGGGCCT+TGG 0.317902 tig0026659:-19641 Msa1430440:intron
TTGCTGGCAATAGAGCATTC+TGG 0.317928 tig0026659:-19377 Msa1430440:CDS
GCCATCAGATATTGGTTATT+GGG 0.320162 tig0026659:-20080 Msa1430440:CDS
CCATTGTTCTTTCCCTTAAA+GGG 0.323956 tig0026659:-21859 Msa1430440:CDS
ACTTCTTAAAATCAATTCTA+AGG 0.326188 tig0026659:-19535 Msa1430440:intron
CTTCTACAGCCATCAGATAT+TGG 0.328425 tig0026659:-20088 Msa1430440:CDS
TCCCTGTGTAAGACGAAAAC+TGG 0.331692 tig0026659:+21546 None:intergenic
TTTAGCAAAATATTCATATA+CGG 0.341239 tig0026659:+20960 None:intergenic
GAAAAGGTTGGGAGAGCTAT+TGG 0.341964 tig0026659:+22465 None:intergenic
CACGTGTTGCTTGATGAAAT+TGG 0.343499 tig0026659:-15727 Msa1430440:CDS
TGCTGGCAATAGAGCATTCT+GGG 0.347508 tig0026659:-19376 Msa1430440:CDS
TCCTGATGTGCTGTCTAGTA+TGG 0.352618 tig0026659:-22496 Msa1430440:CDS
ATGTAGAAATCGTAATTTCT+TGG 0.356720 tig0026659:+15959 None:intergenic
CAAAGTTGAATTGGAATGTC+AGG 0.363699 tig0026659:-15336 Msa1430440:CDS
AAATTGGGTCTTAACATCTA+TGG 0.365758 tig0026659:+15227 None:intergenic
AAAAGGATGATGGTATTATC+AGG 0.373300 tig0026659:-18988 Msa1430440:intron
CAACTTTGGAAGCTCTTGAA+TGG 0.375153 tig0026659:+15351 None:intergenic
ACTTTCCATGTCTTGATGTT+GGG 0.375386 tig0026659:-20906 Msa1430440:CDS
GCTCTATATCTCGAAATTAG+AGG 0.379869 tig0026659:+19100 None:intergenic
GCCCTCGCGAGGAAAATAAA+AGG 0.383421 tig0026659:-21952 Msa1430440:CDS
GATAGGAGAAAATCAATTAC+AGG 0.385642 tig0026659:+21384 None:intergenic
AACTTTGGAAGCTCTTGAAT+GGG 0.386107 tig0026659:+15352 None:intergenic
TCAGTTGAGGGCATATTTAA+GGG 0.386233 tig0026659:-14893 Msa1430440:three_prime_UTR
AGCCTTACAGCAGCTGTTGA+TGG 0.387959 tig0026659:+19272 None:intergenic
TGGAGGAATAAATTCTTTGC+TGG 0.397191 tig0026659:-19393 Msa1430440:CDS
TCACTTGACATACATTATAC+TGG 0.400607 tig0026659:+22343 None:intergenic
GCGGCCATTTACTTTATTAG+AGG 0.401735 tig0026659:-19873 Msa1430440:CDS
AGGTTGCAGCTGTGCTCCTC+TGG 0.405009 tig0026659:+15570 None:intergenic
TACTTTCCATGTCTTGATGT+TGG 0.405546 tig0026659:-20907 Msa1430440:CDS
GGGATGTTTCCCTCTGAATC+AGG 0.405805 tig0026659:+15373 None:intergenic
TCAAGAACTCTTCCTTCAAC+TGG 0.410088 tig0026659:+20442 None:intergenic
CCATCCCTAAAATCATCGTT+GGG 0.410555 tig0026659:+19330 None:intergenic
ATATGACTCGATCCCTTTAA+GGG 0.411344 tig0026659:+21847 None:intergenic
AGCAGCAGTACTGAGAGTTT+TGG 0.411522 tig0026659:-21986 Msa1430440:intron
CTGACATTCCAATTCAACTT+TGG 0.412092 tig0026659:+15337 None:intergenic
CACTTACAGTTGTTGAATGC+AGG 0.412851 tig0026659:+21157 None:intergenic
CTGTTGAAAGCAAGGGCATC+AGG 0.419930 tig0026659:-22239 Msa1430440:CDS
AGGCGGAGTAGAAGGAGTTC+GGG 0.420984 tig0026659:-21578 Msa1430440:CDS
TGGTGAATCTCAATTTCAAC+AGG 0.422456 tig0026659:-16371 Msa1430440:CDS
TGCCACAATTACAGTGAACT+TGG 0.423102 tig0026659:+16139 None:intergenic
TTATGTTGGATTTAGGTTGT+TGG 0.423726 tig0026659:-19136 Msa1430440:intron
CAAGTTCAGAAGAGTATGTT+TGG 0.425625 tig0026659:+22193 None:intergenic
CGTTGGGGTATCTTTAATCA+AGG 0.429944 tig0026659:+19346 None:intergenic
TAGCTTGAAACAGCTTTGTA+TGG 0.436156 tig0026659:+16105 None:intergenic
AGCACAGCTGCAACCTCAAT+TGG 0.437891 tig0026659:-15563 Msa1430440:intron
TGATGTGAAGCCTACTTTCG+TGG 0.443273 tig0026659:-15052 Msa1430440:three_prime_UTR
CAAACATACTCTTCTGAACT+TGG 0.446873 tig0026659:-22192 Msa1430440:CDS
AGGAAGTGTCTGAGTGATGT+TGG 0.447585 tig0026659:-19615 Msa1430440:CDS
AGAGCTTAACCAGATAATAA+AGG 0.448697 tig0026659:-16338 Msa1430440:intron
GCATGGTGGGCATAGTATAT+AGG 0.450067 tig0026659:+15454 None:intergenic
TGAGGCAGCGAGCAGCTAAC+AGG 0.452726 tig0026659:-21784 Msa1430440:intron
TACTGATAATAGAAAAGGTT+GGG 0.453065 tig0026659:+22454 None:intergenic
TTCATAAATTTCGTCAGTTG+AGG 0.454599 tig0026659:-14906 Msa1430440:three_prime_UTR
GTAATCTCAGTAAGGGTTGT+CGG 0.455754 tig0026659:-15197 Msa1430440:three_prime_UTR
AGAAAATCAATTACAGGTCC+AGG 0.458109 tig0026659:+21390 None:intergenic
GGAAGTGTCTGAGTGATGTT+GGG 0.461376 tig0026659:-19614 Msa1430440:CDS
AGGTTGTTGGATCTCGATGC+TGG 0.463185 tig0026659:-19123 Msa1430440:CDS
GAGGCGGAGTAGAAGGAGTT+CGG 0.465739 tig0026659:-21579 Msa1430440:CDS
TTCTGATGGCGTACCAATTG+AGG 0.467308 tig0026659:+15550 None:intergenic
TCGAGGAATTTCATCGATGT+TGG 0.470697 tig0026659:-21601 Msa1430440:intron
AGTAAGCCAAAGCCAAATAA+GGG 0.470857 tig0026659:+22303 None:intergenic
GAATCAATCATCTCCACCTT+AGG 0.471437 tig0026659:+19058 None:intergenic
AAATTCCACCTTCCATTACT+GGG 0.473459 tig0026659:+20233 None:intergenic
GGGAACCTCGTTATATTGAC+TGG 0.475105 tig0026659:-21347 Msa1430440:CDS
AGGAATTTCATCGATGTTGG+AGG 0.476725 tig0026659:-21598 Msa1430440:CDS
TAATTCTCAGGATGCATTGA+GGG 0.477606 tig0026659:-21822 Msa1430440:CDS
TTTCCCTCTGAATCAGGACT+TGG 0.478734 tig0026659:+15379 None:intergenic
TTGATGTTGGGAAGCCAAAT+CGG 0.480224 tig0026659:-20894 Msa1430440:CDS
CATTTGAGCTGCAGCATGGT+GGG 0.481186 tig0026659:+15441 None:intergenic
CAGCCTACTGATAATAGAAA+AGG 0.484945 tig0026659:+22449 None:intergenic
TTCTACATGTGTGCTCATGC+TGG 0.485331 tig0026659:-15944 Msa1430440:CDS
AGGCTGAGTGTCGGGACCAC+AGG 0.487528 tig0026659:-22432 Msa1430440:CDS
GATGTTGGAGGCGGAGTAGA+AGG 0.490244 tig0026659:-21586 Msa1430440:CDS
ATTTGGCTTTGGCTTACTGA+AGG 0.490735 tig0026659:-22298 Msa1430440:CDS
TCCACAGCTTCTTCAAAGTC+AGG 0.492479 tig0026659:+22543 None:intergenic
AAATTTCAGGGCCTTGGAAA+AGG 0.493150 tig0026659:-19635 Msa1430440:intron
TTAGGGATGGATGTCTCTCA+TGG 0.493402 tig0026659:-19317 Msa1430440:CDS
CGAGTCATATGCTAATTCTC+AGG 0.493752 tig0026659:-21834 Msa1430440:CDS
GATGTCTCTCATGGTTCCCC+TGG 0.494710 tig0026659:-19308 Msa1430440:CDS
TCCATACTAGACAGCACATC+AGG 0.495360 tig0026659:+22495 None:intergenic
AAGCAATTCACTCCAGTTGA+AGG 0.497118 tig0026659:-20454 Msa1430440:CDS
GAAGACTGCTTCCCCAGTAA+TGG 0.502847 tig0026659:-20245 Msa1430440:CDS
TCAATGTTCTTCTGTTGAGA+TGG 0.505639 tig0026659:-15310 Msa1430440:exon
TCAAATTTATTATCTGGAAG+AGG 0.508444 tig0026659:+22120 None:intergenic
GCTGTTTCAAGCTAATGCTC+TGG 0.511577 tig0026659:-16096 Msa1430440:CDS
AATAGTGAAACCACGAAAGT+AGG 0.512588 tig0026659:+15042 None:intergenic
TCCATCCCTAAAATCATCGT+TGG 0.515662 tig0026659:+19329 None:intergenic
ACTAAAGATGCTCTTTGCAC+AGG 0.518323 tig0026659:+20667 None:intergenic
ATATTCTTATTACAGCTTGG+AGG 0.519143 tig0026659:-19410 Msa1430440:intron
ACTCAATATTACCACAATCA+TGG 0.519245 tig0026659:+15160 None:intergenic
TAAAAGAACTGTTGAAAGCA+AGG 0.519488 tig0026659:-22247 Msa1430440:CDS
AACGAGGTTCCCTCACACTC+TGG 0.519744 tig0026659:+21358 None:intergenic
GGAGGATTGTCTCTTAATAT+GGG 0.521120 tig0026659:-21526 Msa1430440:intron
TTATCAGTAGGCTGAGTGTC+GGG 0.522170 tig0026659:-22440 Msa1430440:CDS
GCCATTTACTTTATTAGAGG+AGG 0.522401 tig0026659:-19870 Msa1430440:CDS
TCATAAATTTCGTCAGTTGA+GGG 0.522853 tig0026659:-14905 Msa1430440:three_prime_UTR
GAAAATTTAACCCTGTTGCA+AGG 0.523968 tig0026659:-19835 Msa1430440:CDS
GGAGGTGATGGAGGTAAAGC+TGG 0.527652 tig0026659:+22516 None:intergenic
ACACAAAGAATCAACTTTGG+TGG 0.530353 tig0026659:+19770 None:intergenic
ATGTGGAATGAGCAAGGGAA+TGG 0.530588 tig0026659:-19999 Msa1430440:intron
CCCTCACACTCTGGTTGGAT+AGG 0.531323 tig0026659:+21367 None:intergenic
AAAATTTAACCCTGTTGCAA+GGG 0.534798 tig0026659:-19834 Msa1430440:CDS
TTCTTGTTCAGGGATGGAGT+TGG 0.535856 tig0026659:-16391 Msa1430440:intron
ATGGAATATCTGATCGGCCA+GGG 0.537320 tig0026659:+19291 None:intergenic
TGTAAGATCACAGTCTCCTA+AGG 0.538809 tig0026659:-19074 Msa1430440:CDS
CATTACTACAAGACGGGCAG+AGG 0.539705 tig0026659:+15079 None:intergenic
GCATCATTCATCTTATCCAC+AGG 0.540020 tig0026659:+19025 None:intergenic
AATTTCATCGATGTTGGAGG+CGG 0.540242 tig0026659:-21595 Msa1430440:CDS
ATTAAAGTGTAAATATCTAT+GGG 0.540425 tig0026659:-15261 Msa1430440:three_prime_UTR
GTATATATCCTTTGAATGCA+TGG 0.545605 tig0026659:-14860 None:intergenic
TTCTAGATGTGAAACATAGG+TGG 0.546095 tig0026659:-14953 Msa1430440:three_prime_UTR
TCCCAAGTTCACTGTAATTG+TGG 0.549617 tig0026659:-16141 Msa1430440:CDS
GGAAAGAACAATGGACTGCA+AGG 0.550385 tig0026659:+21868 None:intergenic
ATAATGCCTTTGTATACCGC+TGG 0.550641 tig0026659:+20692 None:intergenic
TATTCCTATTACCATGATTG+TGG 0.550871 tig0026659:-15171 Msa1430440:three_prime_UTR
ACTTACAGTTGTTGAATGCA+GGG 0.551345 tig0026659:+21158 None:intergenic
ACATGGAAAGTAAGCAGAAG+AGG 0.552059 tig0026659:+20918 None:intergenic
GATGGAATATCTGATCGGCC+AGG 0.555026 tig0026659:+19290 None:intergenic
CAGAACTACCATGCATTCAA+AGG 0.561842 tig0026659:+14852 None:intergenic
GACAGCACATCAGGAGGTGA+TGG 0.564571 tig0026659:+22504 None:intergenic
TCCTATCCAACCAGAGTGTG+AGG 0.566604 tig0026659:-21368 Msa1430440:CDS
AATTTACGCACAAAAGCTAC+TGG 0.567213 tig0026659:+15124 None:intergenic
ATCTCCAAGTCCTGATTCAG+AGG 0.568425 tig0026659:-15383 Msa1430440:CDS
CTAATTCTCAGGATGCATTG+AGG 0.568737 tig0026659:-21823 Msa1430440:CDS
AAGACACAAAGAATCAACTT+TGG 0.569909 tig0026659:+19767 None:intergenic
TCATTTGAGCTGCAGCATGG+TGG 0.570376 tig0026659:+15440 None:intergenic
CAGTGACATTACTACAAGAC+GGG 0.570922 tig0026659:+15073 None:intergenic
GGCAAAAGCTTTGCGTACGA+TGG 0.570982 tig0026659:-22168 Msa1430440:CDS
GAAATTGGATTCTCACCAGA+TGG 0.572088 tig0026659:-15712 Msa1430440:CDS
TCGTTATATTGACTGGGCAA+AGG 0.573639 tig0026659:-21340 Msa1430440:intron
GCCTTTGTATACCGCTGGAG+GGG 0.575742 tig0026659:+20697 None:intergenic
TGCCTTTGTATACCGCTGGA+GGG 0.578738 tig0026659:+20696 None:intergenic
AAAGGTTGCATCTGTAGCAT+CGG 0.579610 tig0026659:+22368 None:intergenic
TTCTTTGTGTCTTGCCAGAG+AGG 0.579962 tig0026659:-19757 Msa1430440:CDS
GATTAGATGTGGAATGAGCA+AGG 0.580659 tig0026659:-20005 Msa1430440:CDS
TGATTCTCTATTCAAGCCTG+TGG 0.582586 tig0026659:-19041 Msa1430440:CDS
AGCTGCTCGCTGCCTCAGTA+CGG 0.583868 tig0026659:+21790 None:intergenic
AAAAGAACTGTTGAAAGCAA+GGG 0.585910 tig0026659:-22246 Msa1430440:CDS
ACATACTCTTCTGAACTTGG+TGG 0.585999 tig0026659:-22189 Msa1430440:CDS
ACATAGGTGGATCTAGTGAC+TGG 0.586058 tig0026659:-14940 Msa1430440:three_prime_UTR
AAAGTTGAATTGGAATGTCA+GGG 0.586502 tig0026659:-15335 Msa1430440:CDS
GCTCTGGAAAACGTTCCTCC+TGG 0.588624 tig0026659:-16080 Msa1430440:intron
TTCTCATTTGAGCTGCAGCA+TGG 0.590822 tig0026659:+15437 None:intergenic
TATTGATCAGTGATCTTGAG+AGG 0.590847 tig0026659:+19570 None:intergenic
TTTGAGACACAGTTGAAGGT+AGG 0.591550 tig0026659:-20275 Msa1430440:intron
ACCTGACTTTGAAGAAGCTG+TGG 0.593647 tig0026659:-22544 Msa1430440:CDS
CCCTTTAAGGGAAAGAACAA+TGG 0.596031 tig0026659:+21859 None:intergenic
GTTCACTTGTTCCCCTCCAG+CGG 0.598429 tig0026659:-20708 Msa1430440:CDS
CTACTGATAATAGAAAAGGT+TGG 0.600339 tig0026659:+22453 None:intergenic
GCCCAATAACCAATATCTGA+TGG 0.600894 tig0026659:+20079 None:intergenic
AGCAACACGTGATAATGCAC+AGG 0.603754 tig0026659:+15739 None:intergenic
ATTGATCAGTGATCTTGAGA+GGG 0.604848 tig0026659:+19571 None:intergenic
ACAAGGGAGCTGATTAGATG+TGG 0.605031 tig0026659:-20016 Msa1430440:CDS
ATTATCAGTAGGCTGAGTGT+CGG 0.606927 tig0026659:-22441 Msa1430440:CDS
GTTGGGGTATCTTTAATCAA+GGG 0.607083 tig0026659:+19347 None:intergenic
ACTTTGGAAGCTCTTGAATG+GGG 0.607139 tig0026659:+15353 None:intergenic
TTCATATACGGTAATATCCA+CGG 0.608023 tig0026659:+20972 None:intergenic
AGGTTCCCTCACACTCTGGT+TGG 0.610864 tig0026659:+21362 None:intergenic
AGCACATCAGGAGGTGATGG+AGG 0.613682 tig0026659:+22507 None:intergenic
ATTAAGTTTAGATGACAGCA+AGG 0.615537 tig0026659:+19796 None:intergenic
ATATATAATAGGGAACGTCT+AGG 0.616244 tig0026659:-15762 Msa1430440:intron
AAGATCACAGTCTCCTAAGG+TGG 0.617635 tig0026659:-19071 Msa1430440:CDS
ATGCCTTTGTATACCGCTGG+AGG 0.619085 tig0026659:+20695 None:intergenic
GGAACCTCGTTATATTGACT+GGG 0.619345 tig0026659:-21346 Msa1430440:CDS
GTGGATAAGATGAATGATGC+TGG 0.619986 tig0026659:-19022 Msa1430440:CDS
GTGATACTAGTTACATAACA+AGG 0.620176 tig0026659:-20033 Msa1430440:CDS
GCAACGACGATCATAAAACC+TGG 0.621966 tig0026659:-21408 Msa1430440:CDS
TTCTTGAAGAAACATTTGCA+AGG 0.623575 tig0026659:-22086 Msa1430440:intron
GGCCTATAAACATATTGATG+AGG 0.628880 tig0026659:-16180 Msa1430440:CDS
GAAAGAACTTTGTACACAGT+GGG 0.633260 tig0026659:-22144 Msa1430440:CDS
GCCACAATTACAGTGAACTT+GGG 0.633960 tig0026659:+16140 None:intergenic
TCAGTGACATTACTACAAGA+CGG 0.636896 tig0026659:+15072 None:intergenic
GCTTCCCCAGTAATGGAAGG+TGG 0.637271 tig0026659:-20238 Msa1430440:CDS
AGAAAGAACTTTGTACACAG+TGG 0.637549 tig0026659:-22145 Msa1430440:CDS
TGTGCTGTCTAGTATGGAAG+CGG 0.638258 tig0026659:-22490 Msa1430440:CDS
GGCTTCCCAACATCAAGACA+TGG 0.639701 tig0026659:+20901 None:intergenic
AATTCCACCTTCCATTACTG+GGG 0.639980 tig0026659:+20234 None:intergenic
CCTATCCAACCAGAGTGTGA+GGG 0.641143 tig0026659:-21367 Msa1430440:CDS
AAGAGGTCAGCTCAATGCCA+CGG 0.643931 tig0026659:+20935 None:intergenic
GTCAATAGAAATACCACATG+CGG 0.644333 tig0026659:+20477 None:intergenic
TCCCCTCCAGCGGTATACAA+AGG 0.644422 tig0026659:-20698 Msa1430440:CDS
GAAAGAACAATGGACTGCAA+GGG 0.645951 tig0026659:+21869 None:intergenic
ACTGCTTCCCCAGTAATGGA+AGG 0.646246 tig0026659:-20241 Msa1430440:CDS
TGGAATATCTGATCGGCCAG+GGG 0.648815 tig0026659:+19292 None:intergenic
TGCTAATGGAAGCCCTCGCG+AGG 0.649571 tig0026659:-21963 Msa1430440:CDS
CAATAACTCGGAGCAGACCG+TGG 0.649994 tig0026659:-20989 Msa1430440:CDS
ATTAGATGTGGAATGAGCAA+GGG 0.654490 tig0026659:-20004 Msa1430440:CDS
CTGTTGATGGAATATCTGAT+CGG 0.655109 tig0026659:+19285 None:intergenic
GATGCTGTTCTTGCCGCATG+TGG 0.655400 tig0026659:-20490 Msa1430440:CDS
TCTCCAAGTCCTGATTCAGA+GGG 0.656047 tig0026659:-15382 Msa1430440:CDS
AGAATTCAACAAACCTCCAG+AGG 0.657878 tig0026659:+20859 None:intergenic
GGTGATGGAGGTAAAGCTGG+TGG 0.663403 tig0026659:+22519 None:intergenic
CATCCCTAAAATCATCGTTG+GGG 0.665242 tig0026659:+19331 None:intergenic
AAATGGAGAAGACAATAACT+CGG 0.665330 tig0026659:-21001 Msa1430440:CDS
AAGAGTTCTTGAGACACCAA+AGG 0.666572 tig0026659:-20431 Msa1430440:intron
TTGATCAGTGATCTTGAGAG+GGG 0.679194 tig0026659:+19572 None:intergenic
AGTATTTACAGAATATTGAG+CGG 0.680400 tig0026659:-19892 Msa1430440:intron
TGATACTAGTTACATAACAA+GGG 0.689799 tig0026659:-20032 Msa1430440:CDS
ATACTAGACAGCACATCAGG+AGG 0.702332 tig0026659:+22498 None:intergenic
GAAGTGTCTGAGTGATGTTG+GGG 0.703380 tig0026659:-19613 Msa1430440:CDS
GGGTTCTTGATACCGTACTG+AGG 0.710755 tig0026659:-21802 Msa1430440:CDS
TCAGTCAAAGACATTCACAG+TGG 0.721924 tig0026659:-21915 Msa1430440:CDS
GGCGGAGTAGAAGGAGTTCG+GGG 0.726067 tig0026659:-21577 Msa1430440:CDS
TTTGCCCAGTCAATATAACG+AGG 0.751855 tig0026659:+21342 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! GAAATATTATTTGATAAAAT+AGG - tig0026659:19420-19439 Msa1430440:intron 10.0%
!!! TATATTAGAAAAGTATATTA+TGG + tig0026659:20050-20069 None:intergenic 10.0%
!! TTTAGCAAAATATTCATATA+CGG + tig0026659:16461-16480 None:intergenic 15.0%
!! GAAATAGTATTTGATAAAAA+AGG - tig0026659:18772-18791 Msa1430440:intron 15.0%
!!! TTATATTTTAGTCTGATTAA+TGG + tig0026659:19216-19235 None:intergenic 15.0%
!!! TGCTAACATAATTTTTTTAT+AGG - tig0026659:20078-20097 Msa1430440:CDS 15.0%
!!! GCTAACATAATTTTTTTATA+GGG - tig0026659:20079-20098 Msa1430440:CDS 15.0%
!!! TGGTATTTTTTTTTTTTAAG+TGG - tig0026659:20112-20131 Msa1430440:intron 15.0%
!!! TATCATATTTTAGTTTTTTC+AGG - tig0026659:20933-20952 Msa1430440:CDS 15.0%
!! TATAGAGTAAAAGATTAAAA+AGG + tig0026659:21639-21658 None:intergenic 15.0%
!!! TCTTTTACTCTATATATAAT+AGG - tig0026659:21645-21664 Msa1430440:intron 15.0%
!!! CTTTTACTCTATATATAATA+GGG - tig0026659:21646-21665 Msa1430440:intron 15.0%
!! ATAGATATTTACACTTTAAT+TGG + tig0026659:22157-22176 None:intergenic 15.0%
!! AATTAAAGTGTAAATATCTA+TGG - tig0026659:22156-22175 Msa1430440:CDS 15.0%
!! ATTAAAGTGTAAATATCTAT+GGG - tig0026659:22157-22176 Msa1430440:CDS 15.0%
!! GAGATTACAAAAAAAAAATT+GGG + tig0026659:22209-22228 None:intergenic 15.0%
!! TGAGATTACAAAAAAAAAAT+TGG + tig0026659:22210-22229 None:intergenic 15.0%
!! TTGAACTCAAATTTATTATC+TGG + tig0026659:15307-15326 None:intergenic 20.0%
!!! AAAGTAGTATCTTGAAATTT+TGG - tig0026659:15685-15704 Msa1430440:CDS 20.0%
!! GAATTTAGTTATTATGTTCA+TGG - tig0026659:15713-15732 Msa1430440:CDS 20.0%
!! ACTAAATAAGATTCTTAACT+TGG - tig0026659:16110-16129 Msa1430440:CDS 20.0%
!!! TAAATTTTTAAGGATTCTCT+TGG + tig0026659:16183-16202 None:intergenic 20.0%
!! AACCAAGAATTCAAAATTTA+TGG - tig0026659:16224-16243 Msa1430440:intron 20.0%
!! TTAACTTTAAATCTCAGAAA+AGG - tig0026659:16314-16333 Msa1430440:intron 20.0%
!! TAACTTTAAATCTCAGAAAA+GGG - tig0026659:16315-16334 Msa1430440:intron 20.0%
!!! CATGAAGTTTTTTATTTCTT+CGG - tig0026659:16373-16392 Msa1430440:CDS 20.0%
!! TTTAGTATGAAGATGAAAAA+TGG - tig0026659:16400-16419 Msa1430440:intron 20.0%
!! TTACAGCAAAATAATACAAT+TGG + tig0026659:16622-16641 None:intergenic 20.0%
!!! TTAAATTTGAGATAAGAAAC+AGG + tig0026659:17263-17282 None:intergenic 20.0%
!! ACTTCTTAAAATCAATTCTA+AGG - tig0026659:17883-17902 Msa1430440:intron 20.0%
!! TTACGCATTTAAATATAACA+TGG + tig0026659:17930-17949 None:intergenic 20.0%
!!! ATTTTAGAAAAAAAGGATGA+TGG - tig0026659:18420-18439 Msa1430440:intron 20.0%
!! AGATGAATATCAAATAGTTA+GGG + tig0026659:19249-19268 None:intergenic 20.0%
!! TAGATGAATATCAAATAGTT+AGG + tig0026659:19250-19269 None:intergenic 20.0%
!! AAAATAGGAATATTTCACAT+AGG - tig0026659:19435-19454 Msa1430440:intron 20.0%
!! AAATAGGAATATTTCACATA+GGG - tig0026659:19436-19455 Msa1430440:intron 20.0%
!! ATATTTCAAGAAACTAGAAA+TGG + tig0026659:18903-18922 None:intergenic 20.0%
!!! AGTGAAAATTTAATGCTTTT+CGG - tig0026659:19738-19757 Msa1430440:CDS 20.0%
!! AGTATATTATGGAATATATG+AGG + tig0026659:20039-20058 None:intergenic 20.0%
!!! TTTTAAGTGGTAATCATATA+TGG - tig0026659:20125-20144 Msa1430440:intron 20.0%
!! ACTAATAACTAGATATCAAT+AGG + tig0026659:20884-20903 None:intergenic 20.0%
!!! TTTTAGTTTTTTCAGGAAAA+TGG - tig0026659:20940-20959 Msa1430440:CDS 20.0%
!! AAAAATCTTACAAGAGATAA+AGG + tig0026659:20990-21009 None:intergenic 20.0%
!! AACAGTTTATCATTTATTGT+TGG + tig0026659:21209-21228 None:intergenic 20.0%
!! ATAACTAAAAAAGAAAAGTG+AGG + tig0026659:21528-21547 None:intergenic 20.0%
!! CAAACATGATAATATAAACA+AGG + tig0026659:21780-21799 None:intergenic 20.0%
!!! GAATACCTTTTACTTATTTT+AGG - tig0026659:21823-21842 Msa1430440:CDS 20.0%
!!! TTTTTTTTGTAATCTCAGTA+AGG - tig0026659:22213-22232 Msa1430440:CDS 20.0%
!!! TTTTTTTGTAATCTCAGTAA+GGG - tig0026659:22214-22233 Msa1430440:CDS 20.0%
! TACTGATAATAGAAAAGGTT+GGG + tig0026659:14967-14986 None:intergenic 25.0%
! ACATACATTATACTGGAAAA+AGG + tig0026659:15071-15090 None:intergenic 25.0%
! TCAAATTTATTATCTGGAAG+AGG + tig0026659:15301-15320 None:intergenic 25.0%
!! CACGAACTCTTAAATTTTTA+AGG + tig0026659:16193-16212 None:intergenic 25.0%
!! AGCCATAAATTTTGAATTCT+TGG + tig0026659:16229-16248 None:intergenic 25.0%
!!! CTGTAAGTGCTTATTTTTTA+TGG - tig0026659:16275-16294 Msa1430440:intron 25.0%
! AAAGGGAAAATAAAAAGTGA+TGG - tig0026659:16332-16351 Msa1430440:intron 25.0%
! AAGGGAAAATAAAAAGTGAT+GGG - tig0026659:16333-16352 Msa1430440:intron 25.0%
!! TAACAGTTTTTCTTTTGGAT+TGG - tig0026659:16639-16658 Msa1430440:intron 25.0%
!!! AGAACTTTGATTTTTTCTTG+AGG + tig0026659:16796-16815 None:intergenic 25.0%
! TAATGCTCATTAAGATTTAC+AGG - tig0026659:16879-16898 Msa1430440:intron 25.0%
! TGATACTAGTTACATAACAA+GGG - tig0026659:17386-17405 Msa1430440:intron 25.0%
! ATGTATTATACCTTGTTCTA+TGG - tig0026659:17443-17462 Msa1430440:intron 25.0%
! CAATTAAATGCAGAATAAGA+TGG + tig0026659:17489-17508 None:intergenic 25.0%
! TCAATATTCTGTAAATACTC+AGG + tig0026659:17525-17544 None:intergenic 25.0%
! AGTATTTACAGAATATTGAG+CGG - tig0026659:17526-17545 Msa1430440:intron 25.0%
! CAACAAAAATATCAACGTAA+AGG + tig0026659:17737-17756 None:intergenic 25.0%
! CATATATTCTTATTACAGCT+TGG - tig0026659:18005-18024 Msa1430440:intron 25.0%
! ATTGCTTACAACAAAAATAG+GGG + tig0026659:18189-18208 None:intergenic 25.0%
! GATTGCTTACAACAAAAATA+GGG + tig0026659:18190-18209 None:intergenic 25.0%
! TGATTGCTTACAACAAAAAT+AGG + tig0026659:18191-18210 None:intergenic 25.0%
!! TACAACCTGTTTTGTATTTT+TGG - tig0026659:18237-18256 Msa1430440:intron 25.0%
!! ATTCTAGTTATGTTGGATTT+AGG - tig0026659:18275-18294 Msa1430440:intron 25.0%
!!! TGCTGGTATTTTAGAAAAAA+AGG - tig0026659:18413-18432 Msa1430440:intron 25.0%
!! ATTTTATATATGAAGGTTGG+AGG + tig0026659:18494-18513 None:intergenic 25.0%
!! AGGATTTTATATATGAAGGT+TGG + tig0026659:18497-18516 None:intergenic 25.0%
!! CAAGAGGATTTTATATATGA+AGG + tig0026659:18501-18520 None:intergenic 25.0%
!! TTGAATGGGTCTTATAAAAA+AGG + tig0026659:18538-18557 None:intergenic 25.0%
! ATGCATCTTGTAATTTGAAT+GGG + tig0026659:18552-18571 None:intergenic 25.0%
! AATGCATCTTGTAATTTGAA+TGG + tig0026659:18553-18572 None:intergenic 25.0%
! TGATTCTCTCTGTTTAATTA+GGG + tig0026659:18594-18613 None:intergenic 25.0%
! TTGATTCTCTCTGTTTAATT+AGG + tig0026659:18595-18614 None:intergenic 25.0%
! AATTAAACAGAGAGAATCAA+AGG - tig0026659:18595-18614 Msa1430440:intron 25.0%
! AAAAAAGGAATATTTCACAC+AGG - tig0026659:18787-18806 Msa1430440:intron 25.0%
! AAAAAGGAATATTTCACACA+GGG - tig0026659:18788-18807 Msa1430440:intron 25.0%
!! TTTCAAATTTTCATGCTATG+TGG + tig0026659:19014-19033 None:intergenic 25.0%
!! AGTGAAAATCTAATGCTTTT+CGG - tig0026659:19110-19129 Msa1430440:CDS 25.0%
! ATAGACTTAGAATATTCTAG+AGG - tig0026659:19281-19300 Msa1430440:CDS 25.0%
! TAGACTTAGAATATTCTAGA+GGG - tig0026659:19282-19301 Msa1430440:CDS 25.0%
! AATAGGAATATTTCACATAG+GGG - tig0026659:19437-19456 Msa1430440:intron 25.0%
!! CATCTTGTAGAATTTTTCTT+TGG - tig0026659:19482-19501 Msa1430440:intron 25.0%
!! TTTTATAGGGTAATCATACA+TGG - tig0026659:20092-20111 Msa1430440:CDS 25.0%
! TCATATATGGTTTACAATGA+AGG - tig0026659:20138-20157 Msa1430440:intron 25.0%
! CATATATGGTTTACAATGAA+GGG - tig0026659:20139-20158 Msa1430440:intron 25.0%
!!! CTTTAGGATGTTTTTGATAA+TGG - tig0026659:20368-20387 Msa1430440:intron 25.0%
! ATCAAGAAAACATTAATGCA+TGG - tig0026659:20404-20423 Msa1430440:intron 25.0%
! AGCTACTTGTATTTATTAGT+GGG - tig0026659:20429-20448 Msa1430440:intron 25.0%
! TGTATTTATTAGTGGGAATT+AGG - tig0026659:20436-20455 Msa1430440:CDS 25.0%
!! GATATGTATTAAAGCACTTA+GGG + tig0026659:20775-20794 None:intergenic 25.0%
!! TGATATGTATTAAAGCACTT+AGG + tig0026659:20776-20795 None:intergenic 25.0%
! GACATTAAGTGTCTAATTTA+AGG - tig0026659:20840-20859 Msa1430440:intron 25.0%
! ATCAAATTGATCAACGAAAA+GGG + tig0026659:21120-21139 None:intergenic 25.0%
! AATCAAATTGATCAACGAAA+AGG + tig0026659:21121-21140 None:intergenic 25.0%
!! TTTTCGTTGATCAATTTGAT+TGG - tig0026659:21120-21139 Msa1430440:intron 25.0%
!! TCTTCTTTTGGTAAATTTTG+TGG + tig0026659:21172-21191 None:intergenic 25.0%
!! ATTCAATTAGGATCTTCTTT+TGG + tig0026659:21184-21203 None:intergenic 25.0%
!!! TTATTGTTGGTGATTCAATT+AGG + tig0026659:21196-21215 None:intergenic 25.0%
! TGATAAACTGTTGTAATTAC+AGG - tig0026659:21217-21236 Msa1430440:CDS 25.0%
! AACCTCATCAATATGTTTAT+AGG + tig0026659:21243-21262 None:intergenic 25.0%
! CTATACATATACAAACACTT+GGG - tig0026659:21378-21397 Msa1430440:CDS 25.0%
!! TATCATAAATTTTCCTCTAC+AGG - tig0026659:21408-21427 Msa1430440:CDS 25.0%
!! ATCATAAATTTTCCTCTACA+GGG - tig0026659:21409-21428 Msa1430440:CDS 25.0%
! ATGTAGAAATCGTAATTTCT+TGG + tig0026659:21462-21481 None:intergenic 25.0%
! ACATGATAATATAAACAAGG+AGG + tig0026659:21777-21796 None:intergenic 25.0%
! TGGTTCCTAAAATAAGTAAA+AGG + tig0026659:21831-21850 None:intergenic 25.0%
!! GAATGAGAAGTGAATTATTT+TGG - tig0026659:22417-22436 Msa1430440:CDS 25.0%
! TCTAGAAAAATGTTTCAACT+CGG + tig0026659:22452-22471 None:intergenic 25.0%
!! TTTTTCTAGATGTGAAACAT+AGG - tig0026659:22462-22481 Msa1430440:CDS 25.0%
CTACTGATAATAGAAAAGGT+TGG + tig0026659:14968-14987 None:intergenic 30.0%
! CAACCTTTTCTATTATCAGT+AGG - tig0026659:14966-14985 Msa1430440:three_prime_UTR 30.0%
TCACTTGACATACATTATAC+TGG + tig0026659:15078-15097 None:intergenic 30.0%
TCATTGCAATTTCCCTTATT+TGG - tig0026659:15103-15122 Msa1430440:three_prime_UTR 30.0%
TAAAAGAACTGTTGAAAGCA+AGG - tig0026659:15171-15190 Msa1430440:three_prime_UTR 30.0%
AAAAGAACTGTTGAAAGCAA+GGG - tig0026659:15172-15191 Msa1430440:three_prime_UTR 30.0%
TCAGGAGAAAACTGATTAAT+AGG - tig0026659:15197-15216 Msa1430440:three_prime_UTR 30.0%
TTCTTGAAGAAACATTTGCA+AGG - tig0026659:15332-15351 Msa1430440:CDS 30.0%
!!! CTTTTTTTCATAATGACTCG+AGG - tig0026659:15800-15819 Msa1430440:intron 30.0%
CAAGATTCCATGATAAGTAT+GGG + tig0026659:15928-15947 None:intergenic 30.0%
GATAGGAGAAAATCAATTAC+AGG + tig0026659:16037-16056 None:intergenic 30.0%
AAATGGAGAAGACAATAACT+CGG - tig0026659:16417-16436 Msa1430440:intron 30.0%
TTCATATACGGTAATATCCA+CGG + tig0026659:16449-16468 None:intergenic 30.0%
AACAAGGATATAGTTCATTC+GGG + tig0026659:16588-16607 None:intergenic 30.0%
GAACAAGGATATAGTTCATT+CGG + tig0026659:16589-16608 None:intergenic 30.0%
ATTGGTACAAAAGAAGAACA+AGG + tig0026659:16604-16623 None:intergenic 30.0%
! TGCTGTAACAGTTTTTCTTT+TGG - tig0026659:16634-16653 Msa1430440:intron 30.0%
CTACACAAATAGAACAGAAA+AGG + tig0026659:16686-16705 None:intergenic 30.0%
!!! TGATTTTTTCTTGAGGCTTT+TGG + tig0026659:16789-16808 None:intergenic 30.0%
CATTAAGATTTACAGGCTAT+TGG - tig0026659:16886-16905 Msa1430440:intron 30.0%
TTACAGGCTATTGGAAATTA+TGG - tig0026659:16895-16914 Msa1430440:intron 30.0%
TAATAGAGAAAGCAGTGTAA+AGG - tig0026659:17064-17083 Msa1430440:intron 30.0%
TCTCAAAGAGAACTGTATTA+GGG + tig0026659:17130-17149 None:intergenic 30.0%
!!! AAGGTGGAATTTTAAAACGA+AGG - tig0026659:17196-17215 Msa1430440:intron 30.0%
GTGATACTAGTTACATAACA+AGG - tig0026659:17385-17404 Msa1430440:intron 30.0%
TCCTCCTCTAATAAAGTAAA+TGG + tig0026659:17552-17571 None:intergenic 30.0%
AAAATTTAACCCTGTTGCAA+GGG - tig0026659:17584-17603 Msa1430440:intron 30.0%
ATTAAGTTTAGATGACAGCA+AGG + tig0026659:17625-17644 None:intergenic 30.0%
TTGCTGTCATCTAAACTTAA+TGG - tig0026659:17624-17643 Msa1430440:intron 30.0%
AAGACACAAAGAATCAACTT+TGG + tig0026659:17654-17673 None:intergenic 30.0%
CCTGAAATTTACAAAGAACA+CGG + tig0026659:17773-17792 None:intergenic 30.0%
CGTGTTCTTTGTAAATTTCA+GGG - tig0026659:17771-17790 Msa1430440:intron 30.0%
!! TTTTAAGAAGTACGTTAGTG+AGG + tig0026659:17874-17893 None:intergenic 30.0%
ATATTCTTATTACAGCTTGG+AGG - tig0026659:18008-18027 Msa1430440:intron 30.0%
GATGACCAAAAATACAAAAC+AGG + tig0026659:18245-18264 None:intergenic 30.0%
!! TTATGTTGGATTTAGGTTGT+TGG - tig0026659:18282-18301 Msa1430440:intron 30.0%
! AAAAGGATGATGGTATTATC+AGG - tig0026659:18430-18449 Msa1430440:intron 30.0%
TTCTCTCACTGAATAATTGA+AGG - tig0026659:18626-18645 Msa1430440:intron 30.0%
! TACTTTTCTTAGTTGTGCTT+TGG - tig0026659:18698-18717 Msa1430440:intron 30.0%
AAAGGAATAGAATGACTATG+TGG - tig0026659:18721-18740 Msa1430440:intron 30.0%
AAGGAATAGAATGACTATGT+GGG - tig0026659:18722-18741 Msa1430440:intron 30.0%
AAAAGGAATATTTCACACAG+GGG - tig0026659:18789-18808 Msa1430440:intron 30.0%
CAAATTAATAGACTCAAAGC+TGG + tig0026659:18931-18950 None:intergenic 30.0%
TTTAATAAAGCTCACAAGCA+TGG + tig0026659:19037-19056 None:intergenic 30.0%
!! TTGTGAGCTTTATTAAACTC+CGG - tig0026659:19040-19059 Msa1430440:CDS 30.0%
GTAGGAATATAATGACTGTA+CGG - tig0026659:19364-19383 Msa1430440:CDS 30.0%
TAGGAATATAATGACTGTAC+GGG - tig0026659:19365-19384 Msa1430440:CDS 30.0%
! CCAAATCTCAGTTTTTATCA+CGG + tig0026659:19697-19716 None:intergenic 30.0%
ATCCATTAATCAGACTCAAA+CGG - tig0026659:19824-19843 Msa1430440:CDS 30.0%
!! GCAGAACTTCTAGAATATTA+TGG + tig0026659:19321-19340 None:intergenic 30.0%
TATTATGGAATATATGAGGC+TGG + tig0026659:20035-20054 None:intergenic 30.0%
CTAGATTTCTATAGTTCAAG+TGG - tig0026659:20262-20281 Msa1430440:CDS 30.0%
!! GAATAATTTGAGTTGGTTTG+CGG + tig0026659:20291-20310 None:intergenic 30.0%
CTGAAGAGAATAATTTGAGT+TGG + tig0026659:20298-20317 None:intergenic 30.0%
CAACTCAAATTATTCTCTTC+AGG - tig0026659:20296-20315 Msa1430440:intron 30.0%
TATAGTCGTCTTTGTTCTTT+AGG - tig0026659:20352-20371 Msa1430440:intron 30.0%
GAGCTACTTGTATTTATTAG+TGG - tig0026659:20428-20447 Msa1430440:intron 30.0%
ACATCTCATACTACTCATAT+GGG + tig0026659:20474-20493 None:intergenic 30.0%
AACATCTCATACTACTCATA+TGG + tig0026659:20475-20494 None:intergenic 30.0%
TATGAGTAGTATGAGATGTT+CGG - tig0026659:20475-20494 Msa1430440:CDS 30.0%
TTAAAAGCTAGCTATCAAGA+GGG + tig0026659:20527-20546 None:intergenic 30.0%
!!! TCTTGATAGCTAGCTTTTAA+GGG - tig0026659:20527-20546 Msa1430440:intron 30.0%
!! CATTTTACTCGGTTTTTTTC+CGG + tig0026659:20591-20610 None:intergenic 30.0%
!! GCACATTAGACTATTTTAAG+TGG - tig0026659:20707-20726 Msa1430440:CDS 30.0%
!!! CCTTGACATCTAGTTTTTAT+GGG - tig0026659:20743-20762 Msa1430440:intron 30.0%
TTGTGCTAGTATTTGATTAG+TGG - tig0026659:20909-20928 Msa1430440:CDS 30.0%
AGAGCTTAACCAGATAATAA+AGG - tig0026659:21080-21099 Msa1430440:intron 30.0%
CCAAGTGTTTGTATATGTAT+AGG + tig0026659:21380-21399 None:intergenic 30.0%
CCTATACATATACAAACACT+TGG - tig0026659:21377-21396 Msa1430440:CDS 30.0%
ATATATAATAGGGAACGTCT+AGG - tig0026659:21656-21675 Msa1430440:intron 30.0%
!! ATAAGTAAAAGGTATTCAGC+AGG + tig0026659:21820-21839 None:intergenic 30.0%
!!! TTACTTATTTTAGGAACCAG+AGG - tig0026659:21832-21851 Msa1430440:CDS 30.0%
AAAGTTGAATTGGAATGTCA+GGG - tig0026659:22083-22102 Msa1430440:intron 30.0%
AAATTGGGTCTTAACATCTA+TGG + tig0026659:22194-22213 None:intergenic 30.0%
TATTCCTATTACCATGATTG+TGG - tig0026659:22247-22266 Msa1430440:CDS 30.0%
ATTACCACAATCATGGTAAT+AGG + tig0026659:22254-22273 None:intergenic 30.0%
ACTCAATATTACCACAATCA+TGG + tig0026659:22261-22280 None:intergenic 30.0%
TTCATAAATTTCGTCAGTTG+AGG - tig0026659:22512-22531 Msa1430440:CDS 30.0%
TCATAAATTTCGTCAGTTGA+GGG - tig0026659:22513-22532 Msa1430440:CDS 30.0%
CAGCCTACTGATAATAGAAA+AGG + tig0026659:14972-14991 None:intergenic 35.0%
! CAATTTCCCTTATTTGGCTT+TGG - tig0026659:15109-15128 Msa1430440:three_prime_UTR 35.0%
AGTAAGCCAAAGCCAAATAA+GGG + tig0026659:15118-15137 None:intergenic 35.0%
! CAAGTTCAGAAGAGTATGTT+TGG + tig0026659:15228-15247 None:intergenic 35.0%
CAAACATACTCTTCTGAACT+TGG - tig0026659:15226-15245 Msa1430440:three_prime_UTR 35.0%
AGAAAGAACTTTGTACACAG+TGG - tig0026659:15273-15292 Msa1430440:three_prime_UTR 35.0%
GAAAGAACTTTGTACACAGT+GGG - tig0026659:15274-15293 Msa1430440:three_prime_UTR 35.0%
TTGAAGAAACATTTGCAAGG+TGG - tig0026659:15335-15354 Msa1430440:CDS 35.0%
AGCTTCAACACTAGAAAACA+AGG + tig0026659:15391-15410 None:intergenic 35.0%
ACTGCTGCTAGAGTTTAAAA+AGG + tig0026659:15421-15440 None:intergenic 35.0%
TCCATTGTTCTTTCCCTTAA+AGG - tig0026659:15558-15577 Msa1430440:intron 35.0%
CCATTGTTCTTTCCCTTAAA+GGG - tig0026659:15559-15578 Msa1430440:intron 35.0%
ATATGACTCGATCCCTTTAA+GGG + tig0026659:15574-15593 None:intergenic 35.0%
TAATTCTCAGGATGCATTGA+GGG - tig0026659:15596-15615 Msa1430440:intron 35.0%
GGAGGATTGTCTCTTAATAT+GGG - tig0026659:15892-15911 Msa1430440:intron 35.0%
GATTGTCTCTTAATATGGGT+AGG - tig0026659:15896-15915 Msa1430440:intron 35.0%
CCAAGATTCCATGATAAGTA+TGG + tig0026659:15929-15948 None:intergenic 35.0%
CCATACTTATCATGGAATCT+TGG - tig0026659:15926-15945 Msa1430440:intron 35.0%
AGAAAATCAATTACAGGTCC+AGG + tig0026659:16031-16050 None:intergenic 35.0%
TGGCATAAGTAATTTCCTGA+AGG - tig0026659:16130-16149 Msa1430440:CDS 35.0%
!!! CTGAAGGCATTTTTCTTTCT+GGG - tig0026659:16146-16165 Msa1430440:CDS 35.0%
TTTCTTTCTGGGTAATCTGT+AGG - tig0026659:16157-16176 Msa1430440:CDS 35.0%
ACTTACAGTTGTTGAATGCA+GGG + tig0026659:16263-16282 None:intergenic 35.0%
! GAATATTTTGCTAAACACCG+TGG - tig0026659:16466-16485 Msa1430440:intron 35.0%
TACTTTCCATGTCTTGATGT+TGG - tig0026659:16511-16530 Msa1430440:intron 35.0%
ACTTTCCATGTCTTGATGTT+GGG - tig0026659:16512-16531 Msa1430440:intron 35.0%
GTCAATAGAAATACCACATG+CGG + tig0026659:16944-16963 None:intergenic 35.0%
!! AGCAAGTTGATACATACCTT+TGG + tig0026659:17006-17025 None:intergenic 35.0%
GTCTCAAAGAGAACTGTATT+AGG + tig0026659:17131-17150 None:intergenic 35.0%
AAATTCCACCTTCCATTACT+GGG + tig0026659:17188-17207 None:intergenic 35.0%
AAAATTCCACCTTCCATTAC+TGG + tig0026659:17189-17208 None:intergenic 35.0%
! AGCCATCAGATATTGGTTAT+TGG - tig0026659:17337-17356 Msa1430440:intron 35.0%
! GCCATCAGATATTGGTTATT+GGG - tig0026659:17338-17357 Msa1430440:intron 35.0%
ATTAGATGTGGAATGAGCAA+GGG - tig0026659:17414-17433 Msa1430440:intron 35.0%
GCCATTTACTTTATTAGAGG+AGG - tig0026659:17548-17567 Msa1430440:intron 35.0%
GAAAATTTAACCCTGTTGCA+AGG - tig0026659:17583-17602 Msa1430440:intron 35.0%
ACACAAAGAATCAACTTTGG+TGG + tig0026659:17651-17670 None:intergenic 35.0%
AGGAAAAACTGTGACATCTA+TGG - tig0026659:17681-17700 Msa1430440:intron 35.0%
TATCAACGTAAAGGAAACAC+TGG + tig0026659:17728-17747 None:intergenic 35.0%
CCGTGTTCTTTGTAAATTTC+AGG - tig0026659:17770-17789 Msa1430440:intron 35.0%
ATTGATCAGTGATCTTGAGA+GGG + tig0026659:17850-17869 None:intergenic 35.0%
TATTGATCAGTGATCTTGAG+AGG + tig0026659:17851-17870 None:intergenic 35.0%
TGGAGGAATAAATTCTTTGC+TGG - tig0026659:18025-18044 Msa1430440:intron 35.0%
! GTTGGGGTATCTTTAATCAA+GGG + tig0026659:18074-18093 None:intergenic 35.0%
! ATACCCCAACGATGATTTTA+GGG - tig0026659:18084-18103 Msa1430440:intron 35.0%
! CTGTTGATGGAATATCTGAT+CGG + tig0026659:18136-18155 None:intergenic 35.0%
ACAAAACAGGTTGTATTGCA+AGG + tig0026659:18232-18251 None:intergenic 35.0%
! GCAGCTAATTCTAGTTATGT+TGG - tig0026659:18268-18287 Msa1430440:intron 35.0%
GCTCTATATCTCGAAATTAG+AGG + tig0026659:18321-18340 None:intergenic 35.0%
! GGACAACAAGATTTTACAAG+AGG + tig0026659:18517-18536 None:intergenic 35.0%
!! TTCTTAGTTGTGCTTTGGAA+AGG - tig0026659:18703-18722 Msa1430440:intron 35.0%
AGGAATAGAATGACTATGTG+GGG - tig0026659:18723-18742 Msa1430440:intron 35.0%
AAAGGAATATTTCACACAGG+GGG - tig0026659:18790-18809 Msa1430440:intron 35.0%
GTTAGTGTACAAAACCAGAA+TGG - tig0026659:18982-19001 Msa1430440:intron 35.0%
CCAAATCTCAGTTTCTATCA+CGG + tig0026659:19069-19088 None:intergenic 35.0%
TCTGCATCATACAGTAAACA+CGG - tig0026659:19336-19355 Msa1430440:CDS 35.0%
AGGAATATAATGACTGTACG+GGG - tig0026659:19366-19385 Msa1430440:CDS 35.0%
CAAATTAATAGACTCGAAGC+TGG + tig0026659:19563-19582 None:intergenic 35.0%
! GGCATGGTTTCAAATTTTCA+TGG + tig0026659:19649-19668 None:intergenic 35.0%
! TCAGTTTTTATCACGGTATC+CGG + tig0026659:19690-19709 None:intergenic 35.0%
CCGTGATAAAAACTGAGATT+TGG - tig0026659:19694-19713 Msa1430440:intron 35.0%
TTCCGTTTGAGTCTGATTAA+TGG + tig0026659:19829-19848 None:intergenic 35.0%
ACAGACTTAGAATGTTCTAG+AGG - tig0026659:19894-19913 Msa1430440:intron 35.0%
! TTAGTGGGAATTAGGTATTG+TGG - tig0026659:20444-20463 Msa1430440:CDS 35.0%
! TAGTGGGAATTAGGTATTGT+GGG - tig0026659:20445-20464 Msa1430440:CDS 35.0%
CTTAAAAGCTAGCTATCAAG+AGG + tig0026659:20528-20547 None:intergenic 35.0%
!!! CTCTTGATAGCTAGCTTTTA+AGG - tig0026659:20526-20545 Msa1430440:intron 35.0%
GATTTAGGCAACCCATTAAA+CGG + tig0026659:20666-20685 None:intergenic 35.0%
!!! GCCTTGACATCTAGTTTTTA+TGG - tig0026659:20742-20761 Msa1430440:intron 35.0%
CCCATAAAAACTAGATGTCA+AGG + tig0026659:20746-20765 None:intergenic 35.0%
!!! TGACATCTAGTTTTTATGGG+AGG - tig0026659:20746-20765 Msa1430440:intron 35.0%
!!! GACATCTAGTTTTTATGGGA+GGG - tig0026659:20747-20766 Msa1430440:intron 35.0%
! TCTGATGTCTTTTCTTGTTC+AGG - tig0026659:21016-21035 Msa1430440:CDS 35.0%
! CTGATGTCTTTTCTTGTTCA+GGG - tig0026659:21017-21036 Msa1430440:CDS 35.0%
TGGTGAATCTCAATTTCAAC+AGG - tig0026659:21047-21066 Msa1430440:intron 35.0%
TGCACACAACCTTTATTATC+TGG + tig0026659:21092-21111 None:intergenic 35.0%
AATTGATCAACGAAAAGGGA+GGG + tig0026659:21116-21135 None:intergenic 35.0%
AAATTGATCAACGAAAAGGG+AGG + tig0026659:21117-21136 None:intergenic 35.0%
GGCCTATAAACATATTGATG+AGG - tig0026659:21238-21257 Msa1430440:CDS 35.0%
! TAGCTTGAAACAGCTTTGTA+TGG + tig0026659:21316-21335 None:intergenic 35.0%
GCTCTACTAATGCTTGTAAA+AGG + tig0026659:21554-21573 None:intergenic 35.0%
TAAAATGCCAACTCTTCAAC+TGG + tig0026659:21604-21623 None:intergenic 35.0%
CATGCAAAAGACAATTCTGA+TGG + tig0026659:21885-21904 None:intergenic 35.0%
! AACTTTGGAAGCTCTTGAAT+GGG + tig0026659:22069-22088 None:intergenic 35.0%
AAGAGCTTCCAAAGTTGAAT+TGG - tig0026659:22073-22092 Msa1430440:intron 35.0%
CTGACATTCCAATTCAACTT+TGG + tig0026659:22084-22103 None:intergenic 35.0%
CAAAGTTGAATTGGAATGTC+AGG - tig0026659:22082-22101 Msa1430440:intron 35.0%
TCAATGTTCTTCTGTTGAGA+TGG - tig0026659:22108-22127 Msa1430440:CDS 35.0%
AATTTACGCACAAAAGCTAC+TGG + tig0026659:22297-22316 None:intergenic 35.0%
TCAGTGACATTACTACAAGA+CGG + tig0026659:22349-22368 None:intergenic 35.0%
AATAGTGAAACCACGAAAGT+AGG + tig0026659:22379-22398 None:intergenic 35.0%
! CTTTCGTGGTTTCACTATTT+TGG - tig0026659:22380-22399 Msa1430440:CDS 35.0%
TTCTAGATGTGAAACATAGG+TGG - tig0026659:22465-22484 Msa1430440:CDS 35.0%
! TCAGTTGAGGGCATATTTAA+GGG - tig0026659:22525-22544 Msa1430440:CDS 35.0%
ATTATCAGTAGGCTGAGTGT+CGG - tig0026659:14977-14996 Msa1430440:three_prime_UTR 40.0%
! CAAATGTATGCGTTTTCCTG+TGG + tig0026659:15005-15024 None:intergenic 40.0%
AAAGGTTGCATCTGTAGCAT+CGG + tig0026659:15053-15072 None:intergenic 40.0%
CAGTAAGCCAAAGCCAAATA+AGG + tig0026659:15119-15138 None:intergenic 40.0%
!! ATTTGGCTTTGGCTTACTGA+AGG - tig0026659:15120-15139 Msa1430440:three_prime_UTR 40.0%
! TGGCTTACTGAAGGTTTTTC+AGG - tig0026659:15129-15148 Msa1430440:three_prime_UTR 40.0%
ACATACTCTTCTGAACTTGG+TGG - tig0026659:15229-15248 Msa1430440:three_prime_UTR 40.0%
!!! ACTGAGAGTTTTGGTGCTAA+TGG - tig0026659:15441-15460 Msa1430440:CDS 40.0%
!!! ACCTTTTATTTTCCTCGCGA+GGG + tig0026659:15470-15489 None:intergenic 40.0%
TCAGTCAAAGACATTCACAG+TGG - tig0026659:15503-15522 Msa1430440:intron 40.0%
!!! AATGGACTGCAAGGGTATTT+TGG + tig0026659:15544-15563 None:intergenic 40.0%
!! GAAAGAACAATGGACTGCAA+GGG + tig0026659:15552-15571 None:intergenic 40.0%
! CCCTTTAAGGGAAAGAACAA+TGG + tig0026659:15562-15581 None:intergenic 40.0%
CATATGACTCGATCCCTTTA+AGG + tig0026659:15575-15594 None:intergenic 40.0%
CGAGTCATATGCTAATTCTC+AGG - tig0026659:15584-15603 Msa1430440:intron 40.0%
CTAATTCTCAGGATGCATTG+AGG - tig0026659:15595-15614 Msa1430440:intron 40.0%
ACATGAATCCTTTCTTTGCG+TGG - tig0026659:15750-15769 Msa1430440:CDS 40.0%
TCGAGGAATTTCATCGATGT+TGG - tig0026659:15817-15836 Msa1430440:intron 40.0%
AGGAATTTCATCGATGTTGG+AGG - tig0026659:15820-15839 Msa1430440:intron 40.0%
AATTTCATCGATGTTGGAGG+CGG - tig0026659:15823-15842 Msa1430440:intron 40.0%
! TTCCAGTTTTCGTCTTACAC+AGG - tig0026659:15870-15889 Msa1430440:intron 40.0%
! TCCAGTTTTCGTCTTACACA+GGG - tig0026659:15871-15890 Msa1430440:intron 40.0%
GGGAGGATTGTCTCTTAATA+TGG - tig0026659:15891-15910 Msa1430440:intron 40.0%
GAATGCTCCCATACTTATCA+TGG - tig0026659:15918-15937 Msa1430440:intron 40.0%
!! AGGTTTTATGATCGTCGTTG+CGG + tig0026659:16011-16030 None:intergenic 40.0%
! GGAACCTCGTTATATTGACT+GGG - tig0026659:16072-16091 Msa1430440:intron 40.0%
TTTGCCCAGTCAATATAACG+AGG + tig0026659:16079-16098 None:intergenic 40.0%
! TCGTTATATTGACTGGGCAA+AGG - tig0026659:16078-16097 Msa1430440:intron 40.0%
CCAGAAAGAAAAATGCCTTC+AGG + tig0026659:16148-16167 None:intergenic 40.0%
!!! CCTGAAGGCATTTTTCTTTC+TGG - tig0026659:16145-16164 Msa1430440:CDS 40.0%
CACTTACAGTTGTTGAATGC+AGG + tig0026659:16264-16283 None:intergenic 40.0%
ACATGGAAAGTAAGCAGAAG+AGG + tig0026659:16503-16522 None:intergenic 40.0%
TTGATGTTGGGAAGCCAAAT+CGG - tig0026659:16524-16543 Msa1430440:intron 40.0%
AGAATTCAACAAACCTCCAG+AGG + tig0026659:16562-16581 None:intergenic 40.0%
ATAATGCCTTTGTATACCGC+TGG + tig0026659:16729-16748 None:intergenic 40.0%
ACTAAAGATGCTCTTTGCAC+AGG + tig0026659:16754-16773 None:intergenic 40.0%
AAGCAATTCACTCCAGTTGA+AGG - tig0026659:16964-16983 Msa1430440:intron 40.0%
TCAAGAACTCTTCCTTCAAC+TGG + tig0026659:16979-16998 None:intergenic 40.0%
AAGAGTTCTTGAGACACCAA+AGG - tig0026659:16987-17006 Msa1430440:intron 40.0%
CTATTATCATTCCGACTCTC+TGG + tig0026659:17050-17069 None:intergenic 40.0%
!! TCTCTTTGAGACACAGTTGA+AGG - tig0026659:17139-17158 Msa1430440:intron 40.0%
! TTTGAGACACAGTTGAAGGT+AGG - tig0026659:17143-17162 Msa1430440:intron 40.0%
AATTCCACCTTCCATTACTG+GGG + tig0026659:17187-17206 None:intergenic 40.0%
CTTCTACAGCCATCAGATAT+TGG - tig0026659:17330-17349 Msa1430440:intron 40.0%
GCCCAATAACCAATATCTGA+TGG + tig0026659:17342-17361 None:intergenic 40.0%
GATTAGATGTGGAATGAGCA+AGG - tig0026659:17413-17432 Msa1430440:intron 40.0%
TACTCTGACACCATAGAACA+AGG + tig0026659:17456-17475 None:intergenic 40.0%
GCGGCCATTTACTTTATTAG+AGG - tig0026659:17545-17564 Msa1430440:intron 40.0%
! TCTTTTCAACCCTTGCAACA+GGG + tig0026659:17596-17615 None:intergenic 40.0%
! ATCTTTTCAACCCTTGCAAC+AGG + tig0026659:17597-17616 None:intergenic 40.0%
! ATGTCACAGTTTTTCCTCTC+TGG + tig0026659:17678-17697 None:intergenic 40.0%
CTTTGTAAATTTCAGGGCCT+TGG - tig0026659:17777-17796 Msa1430440:intron 40.0%
AAATTTCAGGGCCTTGGAAA+AGG - tig0026659:17783-17802 Msa1430440:intron 40.0%
TTGATCAGTGATCTTGAGAG+GGG + tig0026659:17849-17868 None:intergenic 40.0%
! CGTTGGGGTATCTTTAATCA+AGG + tig0026659:18075-18094 None:intergenic 40.0%
! GATACCCCAACGATGATTTT+AGG - tig0026659:18083-18102 Msa1430440:intron 40.0%
CATCCCTAAAATCATCGTTG+GGG + tig0026659:18090-18109 None:intergenic 40.0%
CCATCCCTAAAATCATCGTT+GGG + tig0026659:18091-18110 None:intergenic 40.0%
TCCATCCCTAAAATCATCGT+TGG + tig0026659:18092-18111 None:intergenic 40.0%
TGTAAGATCACAGTCTCCTA+AGG - tig0026659:18344-18363 Msa1430440:intron 40.0%
GAATCAATCATCTCCACCTT+AGG + tig0026659:18363-18382 None:intergenic 40.0%
TGATTCTCTATTCAAGCCTG+TGG - tig0026659:18377-18396 Msa1430440:intron 40.0%
GCATCATTCATCTTATCCAC+AGG + tig0026659:18396-18415 None:intergenic 40.0%
GTGGATAAGATGAATGATGC+TGG - tig0026659:18396-18415 Msa1430440:intron 40.0%
AATAGAATGACTATGTGGGG+AGG - tig0026659:18726-18745 Msa1430440:intron 40.0%
ATAGAATGACTATGTGGGGA+GGG - tig0026659:18727-18746 Msa1430440:intron 40.0%
AAGGAATATTTCACACAGGG+GGG - tig0026659:18791-18810 Msa1430440:intron 40.0%
! GGGCATACAGAACTTTTCTT+AGG - tig0026659:18849-18868 Msa1430440:intron 40.0%
CTATGTGGATGATTCCATTC+TGG + tig0026659:18999-19018 None:intergenic 40.0%
TCAGTTTCTATCACGGTATC+CGG + tig0026659:19062-19081 None:intergenic 40.0%
CCGTGATAGAAACTGAGATT+TGG - tig0026659:19066-19085 Msa1430440:CDS 40.0%
!! TACATGAGTCTTAGCTTGTC+AGG - tig0026659:19186-19205 Msa1430440:intron 40.0%
CTGCATCATACAGTAAACAC+GGG - tig0026659:19337-19356 Msa1430440:CDS 40.0%
AATATAATGACTGTACGGGG+AGG - tig0026659:19369-19388 Msa1430440:CDS 40.0%
ATATAATGACTGTACGGGGA+GGG - tig0026659:19370-19389 Msa1430440:CDS 40.0%
TTTGATAAAGCTCACAGGCA+TGG + tig0026659:19665-19684 None:intergenic 40.0%
! CTGTGAGCTTTATCAAACTC+CGG - tig0026659:19668-19687 Msa1430440:intron 40.0%
! TCGTTTGTCGCTTATCTACA+GGG + tig0026659:19976-19995 None:intergenic 40.0%
! TTCGTTTGTCGCTTATCTAC+AGG + tig0026659:19977-19996 None:intergenic 40.0%
TATGGAATATATGAGGCTGG+AGG + tig0026659:20032-20051 None:intergenic 40.0%
!!! TGATAGCTAGCTTTTAAGGG+AGG - tig0026659:20530-20549 Msa1430440:intron 40.0%
!!! GATAGCTAGCTTTTAAGGGA+GGG - tig0026659:20531-20550 Msa1430440:intron 40.0%
! GCACTCTGCAACATTTTACT+CGG + tig0026659:20602-20621 None:intergenic 40.0%
TACTACTGGATGTGGGATTT+AGG + tig0026659:20681-20700 None:intergenic 40.0%
AAATCCCACATCCAGTAGTA+TGG - tig0026659:20681-20700 Msa1430440:CDS 40.0%
AATCCCACATCCAGTAGTAT+GGG - tig0026659:20682-20701 Msa1430440:CDS 40.0%
TAATGTGCATCCCATACTAC+TGG + tig0026659:20695-20714 None:intergenic 40.0%
!! CAGGAAAATGGACTCACTTT+TGG - tig0026659:20952-20971 Msa1430440:CDS 40.0%
!! GAAAATGGACTCACTTTTGG+TGG - tig0026659:20955-20974 Msa1430440:CDS 40.0%
! TGTCTTTTCTTGTTCAGGGA+TGG - tig0026659:21021-21040 Msa1430440:CDS 40.0%
TCCCAAGTTCACTGTAATTG+TGG - tig0026659:21277-21296 Msa1430440:intron 40.0%
GCCACAATTACAGTGAACTT+GGG + tig0026659:21281-21300 None:intergenic 40.0%
TGCCACAATTACAGTGAACT+TGG + tig0026659:21282-21301 None:intergenic 40.0%
CAAAAAAGTAGCATACCAGG+AGG + tig0026659:21356-21375 None:intergenic 40.0%
GGACAAAAAAGTAGCATACC+AGG + tig0026659:21359-21378 None:intergenic 40.0%
!! CACGTGTTGCTTGATGAAAT+TGG - tig0026659:21691-21710 Msa1430440:intron 40.0%
GAAATTGGATTCTCACCAGA+TGG - tig0026659:21706-21725 Msa1430440:intron 40.0%
! ATCAAGTTTTGCAAGCCATC+TGG + tig0026659:21724-21743 None:intergenic 40.0%
TGCCACTGAAGAAAAAAGGA+GGG + tig0026659:21944-21963 None:intergenic 40.0%
!! TAGGTGCCACTGAAGAAAAA+AGG + tig0026659:21948-21967 None:intergenic 40.0%
! ACTTTGGAAGCTCTTGAATG+GGG + tig0026659:22068-22087 None:intergenic 40.0%
! CAACTTTGGAAGCTCTTGAA+TGG + tig0026659:22070-22089 None:intergenic 40.0%
GTAATCTCAGTAAGGGTTGT+CGG - tig0026659:22221-22240 Msa1430440:CDS 40.0%
CAGTGACATTACTACAAGAC+GGG + tig0026659:22348-22367 None:intergenic 40.0%
! GTCAGTTGAGGGCATATTTA+AGG - tig0026659:22524-22543 Msa1430440:CDS 40.0%
! ACCTGACTTTGAAGAAGCTG+TGG - tig0026659:14874-14893 Msa1430440:three_prime_UTR 45.0%
TCCACAGCTTCTTCAAAGTC+AGG + tig0026659:14878-14897 None:intergenic 45.0%
ATACTAGACAGCACATCAGG+AGG + tig0026659:14923-14942 None:intergenic 45.0%
TCCTGATGTGCTGTCTAGTA+TGG - tig0026659:14922-14941 Msa1430440:three_prime_UTR 45.0%
TCCATACTAGACAGCACATC+AGG + tig0026659:14926-14945 None:intergenic 45.0%
TGTGCTGTCTAGTATGGAAG+CGG - tig0026659:14928-14947 Msa1430440:three_prime_UTR 45.0%
GAAAAGGTTGGGAGAGCTAT+TGG + tig0026659:14956-14975 None:intergenic 45.0%
TTATCAGTAGGCTGAGTGTC+GGG - tig0026659:14978-14997 Msa1430440:three_prime_UTR 45.0%
!! AGCAGCAGTACTGAGAGTTT+TGG - tig0026659:15432-15451 Msa1430440:CDS 45.0%
!!! GACCTTTTATTTTCCTCGCG+AGG + tig0026659:15471-15490 None:intergenic 45.0%
!! GGAAAGAACAATGGACTGCA+AGG + tig0026659:15553-15572 None:intergenic 45.0%
TCCTTTCTTTGCGTGGAAAG+AGG - tig0026659:15757-15776 Msa1430440:intron 45.0%
CCTTTCTTTGCGTGGAAAGA+GGG - tig0026659:15758-15777 Msa1430440:intron 45.0%
!! AAAGAGGGTGTCTCTTGGTA+AGG - tig0026659:15773-15792 Msa1430440:intron 45.0%
TCCCTGTGTAAGACGAAAAC+TGG + tig0026659:15875-15894 None:intergenic 45.0%
! AGTTTTCGTCTTACACAGGG+AGG - tig0026659:15874-15893 Msa1430440:intron 45.0%
GCAACGACGATCATAAAACC+TGG - tig0026659:16010-16029 Msa1430440:intron 45.0%
GGGAACCTCGTTATATTGAC+TGG - tig0026659:16071-16090 Msa1430440:intron 45.0%
!! AAAGTGATGGGTCTCATGAC+TGG - tig0026659:16345-16364 Msa1430440:CDS 45.0%
ACCTCCAGAGGCAAAAAGTT+GGG + tig0026659:16550-16569 None:intergenic 45.0%
AACCTCCAGAGGCAAAAAGT+TGG + tig0026659:16551-16570 None:intergenic 45.0%
! TTTTGTGTGCACCAGAGAGT+CGG - tig0026659:17036-17055 Msa1430440:intron 45.0%
ACAAGGGAGCTGATTAGATG+TGG - tig0026659:17402-17421 Msa1430440:intron 45.0%
ATGTGGAATGAGCAAGGGAA+TGG - tig0026659:17419-17438 Msa1430440:intron 45.0%
TTCTTTGTGTCTTGCCAGAG+AGG - tig0026659:17661-17680 Msa1430440:intron 45.0%
! CTCAGACACTTCCTTTTCCA+AGG + tig0026659:17797-17816 None:intergenic 45.0%
!! AGGAAGTGTCTGAGTGATGT+TGG - tig0026659:17803-17822 Msa1430440:intron 45.0%
!! GGAAGTGTCTGAGTGATGTT+GGG - tig0026659:17804-17823 Msa1430440:intron 45.0%
! GAAGTGTCTGAGTGATGTTG+GGG - tig0026659:17805-17824 Msa1430440:intron 45.0%
! TTGCTGGCAATAGAGCATTC+TGG - tig0026659:18041-18060 Msa1430440:intron 45.0%
! TGCTGGCAATAGAGCATTCT+GGG - tig0026659:18042-18061 Msa1430440:intron 45.0%
!! CCCAACGATGATTTTAGGGA+TGG - tig0026659:18088-18107 Msa1430440:intron 45.0%
TTAGGGATGGATGTCTCTCA+TGG - tig0026659:18101-18120 Msa1430440:intron 45.0%
ATGGAATATCTGATCGGCCA+GGG + tig0026659:18130-18149 None:intergenic 45.0%
TTCCATCAACAGCTGCTGTA+AGG - tig0026659:18144-18163 Msa1430440:intron 45.0%
AAGATCACAGTCTCCTAAGG+TGG - tig0026659:18347-18366 Msa1430440:intron 45.0%
TGAGGTTTCATCTTGTAGCC+TGG - tig0026659:18827-18846 Msa1430440:intron 45.0%
GAGGTTTCATCTTGTAGCCT+GGG - tig0026659:18828-18847 Msa1430440:intron 45.0%
AGGTTTCATCTTGTAGCCTG+GGG - tig0026659:18829-18848 Msa1430440:intron 45.0%
AGAAAAGTTCTGTATGCCCC+AGG + tig0026659:18848-18867 None:intergenic 45.0%
GGGGAATGCATATCACTTTG+AGG - tig0026659:19456-19475 Msa1430440:intron 45.0%
CATGGTATGTCGATGATTGC+TGG + tig0026659:19631-19650 None:intergenic 45.0%
CGGAGTTTGATAAAGCTCAC+AGG + tig0026659:19670-19689 None:intergenic 45.0%
GAGTAGTATGAGATGTTCGG+TGG - tig0026659:20478-20497 Msa1430440:CDS 45.0%
! ATGTTCGGTGGAGTACTCAA+GGG - tig0026659:20490-20509 Msa1430440:CDS 45.0%
TTCGTAGGTAGCCACTACTT+GGG + tig0026659:20560-20579 None:intergenic 45.0%
AAGTAGTGGCTACCTACGAA+GGG - tig0026659:20560-20579 Msa1430440:intron 45.0%
CCATTAAACGGAAGTGACTG+CGG + tig0026659:20654-20673 None:intergenic 45.0%
CGCAGTCACTTCCGTTTAAT+GGG - tig0026659:20652-20671 Msa1430440:CDS 45.0%
CATCCCATACTACTGGATGT+GGG + tig0026659:20688-20707 None:intergenic 45.0%
TTCTTGTTCAGGGATGGAGT+TGG - tig0026659:21027-21046 Msa1430440:intron 45.0%
! GCTGTTTCAAGCTAATGCTC+TGG - tig0026659:21322-21341 Msa1430440:intron 45.0%
TTCTACATGTGTGCTCATGC+TGG - tig0026659:21474-21493 Msa1430440:intron 45.0%
GCTCATGCTGGAATGATTGT+AGG - tig0026659:21486-21505 Msa1430440:intron 45.0%
AATGCCAACTCTTCAACTGG+CGG + tig0026659:21601-21620 None:intergenic 45.0%
! AGCAACACGTGATAATGCAC+AGG + tig0026659:21682-21701 None:intergenic 45.0%
TATTCAGCAGGACAATCTGG+GGG + tig0026659:21808-21827 None:intergenic 45.0%
GTATTCAGCAGGACAATCTG+GGG + tig0026659:21809-21828 None:intergenic 45.0%
GGTATTCAGCAGGACAATCT+GGG + tig0026659:21810-21829 None:intergenic 45.0%
AGGTATTCAGCAGGACAATC+TGG + tig0026659:21811-21830 None:intergenic 45.0%
! TTCTGATGGCGTACCAATTG+AGG + tig0026659:21871-21890 None:intergenic 45.0%
!!! CTCCCTCCTTTTTTCTTCAG+TGG - tig0026659:21939-21958 Msa1430440:CDS 45.0%
! GTGCCACTGAAGAAAAAAGG+AGG + tig0026659:21945-21964 None:intergenic 45.0%
!! GCATGGTGGGCATAGTATAT+AGG + tig0026659:21967-21986 None:intergenic 45.0%
TTCTCATTTGAGCTGCAGCA+TGG + tig0026659:21984-22003 None:intergenic 45.0%
ATCTCCAAGTCCTGATTCAG+AGG - tig0026659:22035-22054 Msa1430440:intron 45.0%
TCTCCAAGTCCTGATTCAGA+GGG - tig0026659:22036-22055 Msa1430440:intron 45.0%
TTTCCCTCTGAATCAGGACT+TGG + tig0026659:22042-22061 None:intergenic 45.0%
TGATGTGAAGCCTACTTTCG+TGG - tig0026659:22366-22385 Msa1430440:CDS 45.0%
ACATAGGTGGATCTAGTGAC+TGG - tig0026659:22478-22497 Msa1430440:CDS 45.0%
!! CTGTTGAAAGCAAGGGCATC+AGG - tig0026659:15179-15198 Msa1430440:three_prime_UTR 50.0%
GGCAAAAGCTTTGCGTACGA+TGG - tig0026659:15250-15269 Msa1430440:three_prime_UTR 50.0%
GCCCTCGCGAGGAAAATAAA+AGG - tig0026659:15466-15485 Msa1430440:intron 50.0%
GGGTTCTTGATACCGTACTG+AGG - tig0026659:15616-15635 Msa1430440:intron 50.0%
CCCTCTTTCCACGCAAAGAA+AGG + tig0026659:15761-15780 None:intergenic 50.0%
TCCTATCCAACCAGAGTGTG+AGG - tig0026659:16050-16069 Msa1430440:intron 50.0%
CCTATCCAACCAGAGTGTGA+GGG - tig0026659:16051-16070 Msa1430440:intron 50.0%
AAGAGGTCAGCTCAATGCCA+CGG + tig0026659:16486-16505 None:intergenic 50.0%
GGCTTCCCAACATCAAGACA+TGG + tig0026659:16520-16539 None:intergenic 50.0%
GGCAAAAAGTTGGGCCGATT+TGG + tig0026659:16541-16560 None:intergenic 50.0%
TGCCTTTGTATACCGCTGGA+GGG + tig0026659:16725-16744 None:intergenic 50.0%
ATGCCTTTGTATACCGCTGG+AGG + tig0026659:16726-16745 None:intergenic 50.0%
GAAGACTGCTTCCCCAGTAA+TGG - tig0026659:17173-17192 Msa1430440:intron 50.0%
! ACTGCTTCCCCAGTAATGGA+AGG - tig0026659:17177-17196 Msa1430440:intron 50.0%
TGGAATATCTGATCGGCCAG+GGG + tig0026659:18129-18148 None:intergenic 50.0%
GATGGAATATCTGATCGGCC+AGG + tig0026659:18131-18150 None:intergenic 50.0%
AGCCTTACAGCAGCTGTTGA+TGG + tig0026659:18149-18168 None:intergenic 50.0%
AGGTTGTTGGATCTCGATGC+TGG - tig0026659:18295-18314 Msa1430440:intron 50.0%
GGGGGATGCATATCACTTTG+AGG - tig0026659:18809-18828 Msa1430440:intron 50.0%
! ACAGTAAACACGGGCACTGT+AGG - tig0026659:19346-19365 Msa1430440:CDS 50.0%
! GATGTTCGGTGGAGTACTCA+AGG - tig0026659:20489-20508 Msa1430440:CDS 50.0%
! TGTTCGGTGGAGTACTCAAG+GGG - tig0026659:20491-20510 Msa1430440:CDS 50.0%
TCGTAGGTAGCCACTACTTG+GGG + tig0026659:20559-20578 None:intergenic 50.0%
CTTCGTAGGTAGCCACTACT+TGG + tig0026659:20561-20580 None:intergenic 50.0%
CAAGTAGTGGCTACCTACGA+AGG - tig0026659:20559-20578 Msa1430440:intron 50.0%
AGTAGTGGCTACCTACGAAG+GGG - tig0026659:20561-20580 Msa1430440:intron 50.0%
CTTGAGAGATGACGTCTTGG+CGG + tig0026659:20627-20646 None:intergenic 50.0%
GCCAAGACGTCATCTCTCAA+GGG - tig0026659:20626-20645 Msa1430440:CDS 50.0%
CCGCAGTCACTTCCGTTTAA+TGG - tig0026659:20651-20670 Msa1430440:CDS 50.0%
GCATCCCATACTACTGGATG+TGG + tig0026659:20689-20708 None:intergenic 50.0%
ATCGACAACTGTCCCTGTAG+AGG + tig0026659:21424-21443 None:intergenic 50.0%
CTGGCGGTGAGATATTTCAC+TGG + tig0026659:21585-21604 None:intergenic 50.0%
AGCACAGCTGCAACCTCAAT+TGG - tig0026659:21855-21874 Msa1430440:CDS 50.0%
CATTTGAGCTGCAGCATGGT+GGG + tig0026659:21980-21999 None:intergenic 50.0%
TCATTTGAGCTGCAGCATGG+TGG + tig0026659:21981-22000 None:intergenic 50.0%
GGGATGTTTCCCTCTGAATC+AGG + tig0026659:22048-22067 None:intergenic 50.0%
CATTACTACAAGACGGGCAG+AGG + tig0026659:22342-22361 None:intergenic 50.0%
!! GGTGATGGAGGTAAAGCTGG+TGG + tig0026659:14902-14921 None:intergenic 55.0%
!! GGAGGTGATGGAGGTAAAGC+TGG + tig0026659:14905-14924 None:intergenic 55.0%
! AGCACATCAGGAGGTGATGG+AGG + tig0026659:14914-14933 None:intergenic 55.0%
GACAGCACATCAGGAGGTGA+TGG + tig0026659:14917-14936 None:intergenic 55.0%
!! CGTGGAAAGAGGGTGTCTCT+TGG - tig0026659:15768-15787 Msa1430440:intron 55.0%
GATGTTGGAGGCGGAGTAGA+AGG - tig0026659:15832-15851 Msa1430440:intron 55.0%
GAGGCGGAGTAGAAGGAGTT+CGG - tig0026659:15839-15858 Msa1430440:intron 55.0%
AGGCGGAGTAGAAGGAGTTC+GGG - tig0026659:15840-15859 Msa1430440:intron 55.0%
CCCTCACACTCTGGTTGGAT+AGG + tig0026659:16054-16073 None:intergenic 55.0%
AGGTTCCCTCACACTCTGGT+TGG + tig0026659:16059-16078 None:intergenic 55.0%
AACGAGGTTCCCTCACACTC+TGG + tig0026659:16063-16082 None:intergenic 55.0%
CAATAACTCGGAGCAGACCG+TGG - tig0026659:16429-16448 Msa1430440:intron 55.0%
! TCGGCCCAACTTTTTGCCTC+TGG - tig0026659:16543-16562 Msa1430440:intron 55.0%
! GCCCAACTTTTTGCCTCTGG+AGG - tig0026659:16546-16565 Msa1430440:intron 55.0%
GTTCACTTGTTCCCCTCCAG+CGG - tig0026659:16710-16729 Msa1430440:intron 55.0%
TCCCCTCCAGCGGTATACAA+AGG - tig0026659:16720-16739 Msa1430440:intron 55.0%
GCCTTTGTATACCGCTGGAG+GGG + tig0026659:16724-16743 None:intergenic 55.0%
GATGCTGTTCTTGCCGCATG+TGG - tig0026659:16928-16947 Msa1430440:intron 55.0%
! GCTTCCCCAGTAATGGAAGG+TGG - tig0026659:17180-17199 Msa1430440:intron 55.0%
GATGTCTCTCATGGTTCCCC+TGG - tig0026659:18110-18129 Msa1430440:intron 55.0%
CGCCAAGACGTCATCTCTCA+AGG - tig0026659:20625-20644 Msa1430440:CDS 55.0%
GCCCTTGAGAGATGACGTCT+TGG + tig0026659:20630-20649 None:intergenic 55.0%
!! GCTCTGGAAAACGTTCCTCC+TGG - tig0026659:21338-21357 Msa1430440:intron 55.0%
CTCACCGCCAGTTGAAGAGT+TGG - tig0026659:21594-21613 Msa1430440:CDS 55.0%
TGCTAATGGAAGCCCTCGCG+AGG - tig0026659:15455-15474 Msa1430440:CDS 60.0%
AGCTGCTCGCTGCCTCAGTA+CGG + tig0026659:15631-15650 None:intergenic 60.0%
TGAGGCAGCGAGCAGCTAAC+AGG - tig0026659:15634-15653 Msa1430440:intron 60.0%
GGCGGAGTAGAAGGAGTTCG+GGG - tig0026659:15841-15860 Msa1430440:intron 60.0%
! GGTGGAGTACTCAAGGGGCT+TGG - tig0026659:20496-20515 Msa1430440:CDS 60.0%
AGGGAGGGTTCCCCAAGTAG+TGG - tig0026659:20546-20565 Msa1430440:intron 60.0%
GTGGCTACCTACGAAGGGGA+TGG - tig0026659:20565-20584 Msa1430440:intron 60.0%
CTACCTACGAAGGGGATGGC+CGG - tig0026659:20569-20588 Msa1430440:intron 60.0%
TTTCCGGCCATCCCCTTCGT+AGG + tig0026659:20575-20594 None:intergenic 60.0%
GAGAGATGACGTCTTGGCGG+CGG + tig0026659:20624-20643 None:intergenic 60.0%
CAGCAGGACAATCTGGGGGT+AGG + tig0026659:21804-21823 None:intergenic 60.0%
AGGTTGCAGCTGTGCTCCTC+TGG + tig0026659:21851-21870 None:intergenic 60.0%
!! AGGCTGAGTGTCGGGACCAC+AGG - tig0026659:14986-15005 Msa1430440:three_prime_UTR 65.0%
Chromosome Type Strat End Strand Name
tig0026659 gene 14863 22577 14863 ID=Msa1430440;Name=Msa1430440
tig0026659 mRNA 14863 22577 14863 ID=Msa1430440-mRNA-1;Parent=Msa1430440;Name=Msa1430440-mRNA-1;_AED=0.13;_eAED=0.13;_QI=0|0.89|0.9|1|1|1|20|452|897
tig0026659 exon 14863 15481 14863 ID=Msa1430440-mRNA-1:exon:7029;Parent=Msa1430440-mRNA-1
tig0026659 exon 15564 15595 15564 ID=Msa1430440-mRNA-1:exon:7028;Parent=Msa1430440-mRNA-1
tig0026659 exon 15679 15773 15679 ID=Msa1430440-mRNA-1:exon:7027;Parent=Msa1430440-mRNA-1
tig0026659 exon 15937 16010 15937 ID=Msa1430440-mRNA-1:exon:7026;Parent=Msa1430440-mRNA-1
tig0026659 exon 16081 16201 16081 ID=Msa1430440-mRNA-1:exon:7025;Parent=Msa1430440-mRNA-1
tig0026659 exon 16339 16402 16339 ID=Msa1430440-mRNA-1:exon:7024;Parent=Msa1430440-mRNA-1
tig0026659 exon 18989 19143 18989 ID=Msa1430440-mRNA-1:exon:7023;Parent=Msa1430440-mRNA-1
tig0026659 exon 19280 19417 19280 ID=Msa1430440-mRNA-1:exon:7022;Parent=Msa1430440-mRNA-1
tig0026659 exon 19536 19648 19536 ID=Msa1430440-mRNA-1:exon:7021;Parent=Msa1430440-mRNA-1
tig0026659 exon 19738 19903 19738 ID=Msa1430440-mRNA-1:exon:7020;Parent=Msa1430440-mRNA-1
tig0026659 exon 20000 20113 20000 ID=Msa1430440-mRNA-1:exon:7019;Parent=Msa1430440-mRNA-1
tig0026659 exon 20223 20285 20223 ID=Msa1430440-mRNA-1:exon:7018;Parent=Msa1430440-mRNA-1
tig0026659 exon 20432 20539 20432 ID=Msa1430440-mRNA-1:exon:7017;Parent=Msa1430440-mRNA-1
tig0026659 exon 20618 20734 20618 ID=Msa1430440-mRNA-1:exon:7016;Parent=Msa1430440-mRNA-1
tig0026659 exon 20873 21041 20873 ID=Msa1430440-mRNA-1:exon:7015;Parent=Msa1430440-mRNA-1
tig0026659 exon 21164 21261 21164 ID=Msa1430440-mRNA-1:exon:7014;Parent=Msa1430440-mRNA-1
tig0026659 exon 21341 21438 21341 ID=Msa1430440-mRNA-1:exon:7013;Parent=Msa1430440-mRNA-1
tig0026659 exon 21527 21618 21527 ID=Msa1430440-mRNA-1:exon:7012;Parent=Msa1430440-mRNA-1
tig0026659 exon 21785 22003 21785 ID=Msa1430440-mRNA-1:exon:7011;Parent=Msa1430440-mRNA-1
tig0026659 exon 22087 22577 22087 ID=Msa1430440-mRNA-1:exon:7010;Parent=Msa1430440-mRNA-1
tig0026659 CDS 22087 22577 22087 ID=Msa1430440-mRNA-1:cds;Parent=Msa1430440-mRNA-1
tig0026659 CDS 21785 22003 21785 ID=Msa1430440-mRNA-1:cds;Parent=Msa1430440-mRNA-1
tig0026659 CDS 21527 21618 21527 ID=Msa1430440-mRNA-1:cds;Parent=Msa1430440-mRNA-1
tig0026659 CDS 21341 21438 21341 ID=Msa1430440-mRNA-1:cds;Parent=Msa1430440-mRNA-1
tig0026659 CDS 21164 21261 21164 ID=Msa1430440-mRNA-1:cds;Parent=Msa1430440-mRNA-1
tig0026659 CDS 20873 21041 20873 ID=Msa1430440-mRNA-1:cds;Parent=Msa1430440-mRNA-1
tig0026659 CDS 20618 20734 20618 ID=Msa1430440-mRNA-1:cds;Parent=Msa1430440-mRNA-1
tig0026659 CDS 20432 20539 20432 ID=Msa1430440-mRNA-1:cds;Parent=Msa1430440-mRNA-1
tig0026659 CDS 20223 20285 20223 ID=Msa1430440-mRNA-1:cds;Parent=Msa1430440-mRNA-1
tig0026659 CDS 20000 20113 20000 ID=Msa1430440-mRNA-1:cds;Parent=Msa1430440-mRNA-1
tig0026659 CDS 19738 19903 19738 ID=Msa1430440-mRNA-1:cds;Parent=Msa1430440-mRNA-1
tig0026659 CDS 19536 19648 19536 ID=Msa1430440-mRNA-1:cds;Parent=Msa1430440-mRNA-1
tig0026659 CDS 19280 19417 19280 ID=Msa1430440-mRNA-1:cds;Parent=Msa1430440-mRNA-1
tig0026659 CDS 18989 19143 18989 ID=Msa1430440-mRNA-1:cds;Parent=Msa1430440-mRNA-1
tig0026659 CDS 16339 16402 16339 ID=Msa1430440-mRNA-1:cds;Parent=Msa1430440-mRNA-1
tig0026659 CDS 16081 16201 16081 ID=Msa1430440-mRNA-1:cds;Parent=Msa1430440-mRNA-1
tig0026659 CDS 15937 16010 15937 ID=Msa1430440-mRNA-1:cds;Parent=Msa1430440-mRNA-1
tig0026659 CDS 15679 15773 15679 ID=Msa1430440-mRNA-1:cds;Parent=Msa1430440-mRNA-1
tig0026659 CDS 15564 15595 15564 ID=Msa1430440-mRNA-1:cds;Parent=Msa1430440-mRNA-1
tig0026659 CDS 15315 15481 15315 ID=Msa1430440-mRNA-1:cds;Parent=Msa1430440-mRNA-1
tig0026659 three_prime_UTR 14863 15314 14863 ID=Msa1430440-mRNA-1:three_prime_utr;Parent=Msa1430440-mRNA-1
Gene Sequence

>Msa1430440

ATGGTGAGTGTACCTGACTTTGAAGAAGCTGTGGAGCCACCAGCTTTACCTCCATCACCTCCTGATGTGCTGTCTAGTATGGAAGCGGAACCAATAGCTCTCCCAACCTTTTCTATTATCAGTAGGCTGAGTGTCGGGACCACAGGAAAACGCATACATTTGCTTGCAAATTTCTTTAAAGCTGCTGCCGATGCTACAGATGCAACCTTTTTCCAGTATAATGTATGTCAAGTGATTCTGTCATTGCAATTTCCCTTATTTGGCTTTGGCTTACTGAAGGTTTTTCAGGTTGCTATCATTTCAGAAGATAAAAGAACTGTTGAAAGCAAGGGCATCAGGAGAAAACTGATTAATAGGCTTCACCAAACATACTCTTCTGAACTTGGTGGCAAAAGCTTTGCGTACGATGGAGAAAGAACTTTGTACACAGTGGGTCCTCTTCCAGATAATAAATTTGAGTTCAATGTATTTCTTGAAGAAACATTTGCAAGCAGTACTGAGAGTTTTGGTGCTAATGGAAGCCCTCGCGAGGAAAATAAAAGGTCAAAACGTTCTTTTCAGTCAAAGACATTCACAGTGGAGATATGTTTTGCTGCCAAAATACCCTTGCAGTCCATTGTTCTTTCCCTTAAAGGGATCGAGTCATATGCTAATTCTCAGGATGCATTGAGGGTTCTTGATACCGTACTGAGGCAGCGAGCAGCTAACAGGAATTTCATCGATGTTGGAGGCGGAGTAGAAGGAGTTCGGGGTATTCATTCCAGTTTTCGTCTTACACAGGGAGGATTGTCTCTTAATATGGATGTGTCCGCAACGACGATCATAAAACCTGGACCTGTAATTGATTTTCTCCTATCCAACCAGAGTGTGAGGGAACCTCGTTATATTGACTGGGCAAAGGCCAAGAGAATCCTTAAAAATTTAAGAGTTCGTGCTACACATCGTAACCAAGAATTCAAAATTTATGGCTTGAGTGAGAAACCCTGCATTCAACAACTTTTTAGTATGAAGATGAAAAATGGAGAAGACAATAACTCGGAGCAGACCGTGGATATTACCGTATATGAATATTTTGCTAAACACCGTGGCATTGAGCTGACCTCTTCTGCTTACTTTCCATGTCTTGATGTTGGGAAGCCAAATCGGCCCAACTTTTTGCCTCTGGAGCTATGTTCACTTGTTCCCCTCCAGCGGTATACAAAGGCATTATCTCCTGTGCAAAGAGCATCTTTAGTAGAAAAATCACGCCAAAAGCCTCAAGAAAAAATCAAAGTTCTGACAAATGCTATTGGAAATTATGGCTATGATGATGATGCTGTTCTTGCCGCATGTGGTATTTCTATTGACAAGCAATTCACTCCAGTTGAAGGAAGAGTTCTTGAGACACCAAAGTTGAAGGTAGGTAATAATGAAGACTGCTTCCCCAGTAATGGAAGGTGGAATTTTAAAACGAAGAAACTTCTACAGCCATCAGATATTGGTTATTGGGCTGTTGTAAACTTTTCTAAACAATGTGATACTAGTTACATAACAAGGGAGCTGATTAGATGTGGAATGAGCAAGGGAATGAATATTGAGCGGCCATTTACTTTATTAGAGGAGGAAGCACAAATGAGAAAATTTAACCCTGTTGCAAGGGTTGAAAAGATGTTTTCCTTGCTGTCATCTAAACTTAATGGTCCACCAAAGTTGATTCTTTGTGTCTTGCCAGAGAGGAAAAACTGTGACATCTATGGGCCTTGGAAAAGGAAGTGTCTGAGTGATGTTGGGGTTGTCACACAGTGCATTTCCCCTCTCAAGATCACTGATCAATACCTCACTAACGTACTTCTTAAAATCAATTCTAAGCTTGGAGGAATAAATTCTTTGCTGGCAATAGAGCATTCTGGGCATCTTCCCTTGATTAAAGATACCCCAACGATGATTTTAGGGATGGATGTCTCTCATGGTTCCCCTGGCCGATCAGATATTCCATCAACAGCTGCTGTTGTTGGATCTCGATGCTGGCCTCTAATTTCGAGATATAGAGCATCTGTAAGATCACAGTCTCCTAAGGTGGAGATGATTGATTCTCTATTCAAGCCTGTGGATAAGATGAATGATGCTGGTATTTTAGAAAAAAAGGATGATGGTATTATCAGGGATGGAGTTGGTGAATCTCAATTTCAACAGGTTTTAGATGTAGAGCTTAACCAGATAATAAAGGCCTATAAACATATTGATGAGGTTGAGAACGATGATGTTCCCAAGTTCACTGTAATTGTGGCACAGAAGAATCACCATACAAAGCTGTTTCAAGCTAATGCTCTGGAAAACGTTCCTCCTGGGACAGTTGTCGATACAAACATTGTGCATCCAAGAAATTACGATTTCTACATGTGTGCTCATGCTGGAATGATTGGAACGTCTAGGCCTGTGCATTATCACGTGTTGCTTGATGAAATTGGATTCTCACCAGATGGCTTGCAAAACTTGATCAATTCGCTGTCTTACGTGAACCAGAGGAGCACAGCTGCAACCTCAATTGTGGCACCTATATACTATGCCCACCATGCTGCAGCTCAAATGAGAAAATTTATGAATTTTGATGATTTATCAGAAGCATCTCCAAGTCCTGATTCAGAGGGAAACATCCCCATTCAAGAGCTTCCAAAGTTGAATTGGAATGTCAGGGACTCAATGTTCTTCTGTTGA
Protein sequence

>Msa1430440

MVSVPDFEEAVEPPALPPSPPDVLSSMEAEPIALPTFSIISRLSVGTTGKRIHLLANFFKAAADATDATFFQYNVCQVILSLQFPLFGFGLLKVFQVAIISEDKRTVESKGIRRKLINRLHQTYSSELGGKSFAYDGERTLYTVGPLPDNKFEFNVFLEETFASSTESFGANGSPREENKRSKRSFQSKTFTVEICFAAKIPLQSIVLSLKGIESYANSQDALRVLDTVLRQRAANRNFIDVGGGVEGVRGIHSSFRLTQGGLSLNMDVSATTIIKPGPVIDFLLSNQSVREPRYIDWAKAKRILKNLRVRATHRNQEFKIYGLSEKPCIQQLFSMKMKNGEDNNSEQTVDITVYEYFAKHRGIELTSSAYFPCLDVGKPNRPNFLPLELCSLVPLQRYTKALSPVQRASLVEKSRQKPQEKIKVLTNAIGNYGYDDDAVLAACGISIDKQFTPVEGRVLETPKLKVGNNEDCFPSNGRWNFKTKKLLQPSDIGYWAVVNFSKQCDTSYITRELIRCGMSKGMNIERPFTLLEEEAQMRKFNPVARVEKMFSLLSSKLNGPPKLILCVLPERKNCDIYGPWKRKCLSDVGVVTQCISPLKITDQYLTNVLLKINSKLGGINSLLAIEHSGHLPLIKDTPTMILGMDVSHGSPGRSDIPSTAAVVGSRCWPLISRYRASVRSQSPKVEMIDSLFKPVDKMNDAGILEKKDDGIIRDGVGESQFQQVLDVELNQIIKAYKHIDEVENDDVPKFTVIVAQKNHHTKLFQANALENVPPGTVVDTNIVHPRNYDFYMCAHAGMIGTSRPVHYHVLLDEIGFSPDGLQNLINSLSYVNQRSTAATSIVAPIYYAHHAAAQMRKFMNFDDLSEASPSPDSEGNIPIQELPKLNWNVRDSMFFC*