Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1432620 | XP_003590964.1 | 99.583 | 240 | 1 | 0 | 1 | 240 | 1 | 240 | 5.82e-176 | 493 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1432620 | sp|Q0P5L0|RBM42_BOVIN | 70.588 | 102 | 30 | 0 | 112 | 213 | 329 | 430 | 7.63e-50 | 172 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1432620 | G7I6S0 | 99.583 | 240 | 1 | 0 | 1 | 240 | 1 | 240 | 2.78e-176 | 493 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0031990 | Msa1432620 | 0.867518 | 1.290411e-65 | -8.615850e-47 |
| Msa0079270 | Msa1432620 | 0.813706 | 2.234470e-51 | -8.615850e-47 |
| Msa1412060 | Msa1432620 | 0.913513 | 5.640057e-84 | -8.615850e-47 |
| Msa0126920 | Msa1432620 | 0.877418 | 6.384008e-69 | -8.615850e-47 |
| Msa0172010 | Msa1432620 | 0.943305 | 1.530154e-102 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1432620 | MtrunA17_Chr1g0190211 | 99.583 | 240 | 1 | 0 | 1 | 240 | 1 | 240 | 5.35e-180 | 493 |
| Msa1432620 | MtrunA17_Chr1g0153871 | 36.782 | 87 | 54 | 1 | 131 | 216 | 189 | 275 | 4.23e-15 | 73.9 |
| Msa1432620 | MtrunA17_Chr3g0139111 | 41.892 | 74 | 43 | 0 | 132 | 205 | 145 | 218 | 1.31e-14 | 72.4 |
| Msa1432620 | MtrunA17_Chr1g0177101 | 27.429 | 175 | 101 | 5 | 54 | 206 | 111 | 281 | 2.40e-14 | 71.2 |
| Msa1432620 | MtrunA17_Chr3g0133651 | 36.782 | 87 | 54 | 1 | 131 | 216 | 186 | 272 | 2.97e-14 | 71.2 |
| Msa1432620 | MtrunA17_Chr2g0328791 | 37.931 | 87 | 53 | 1 | 131 | 216 | 107 | 193 | 3.05e-14 | 71.2 |
| Msa1432620 | MtrunA17_Chr4g0074711 | 43.421 | 76 | 42 | 1 | 131 | 205 | 166 | 241 | 4.63e-14 | 70.9 |
| Msa1432620 | MtrunA17_Chr8g0344491 | 32.381 | 105 | 68 | 1 | 132 | 236 | 147 | 248 | 5.43e-14 | 70.5 |
| Msa1432620 | MtrunA17_Chr4g0070231 | 37.838 | 74 | 46 | 0 | 132 | 205 | 131 | 204 | 7.18e-14 | 70.1 |
| Msa1432620 | MtrunA17_Chr4g0045221 | 40.789 | 76 | 44 | 1 | 131 | 205 | 213 | 288 | 1.16e-13 | 69.7 |
| Msa1432620 | MtrunA17_Chr2g0288251 | 39.474 | 76 | 45 | 1 | 131 | 205 | 154 | 229 | 2.54e-12 | 65.9 |
| Msa1432620 | MtrunA17_Chr4g0035031 | 31.646 | 79 | 54 | 0 | 131 | 209 | 7 | 85 | 4.48e-12 | 63.2 |
| Msa1432620 | MtrunA17_Chr4g0035001 | 30.380 | 79 | 55 | 0 | 131 | 209 | 5 | 83 | 8.50e-12 | 61.6 |
| Msa1432620 | MtrunA17_Chr4g0035051 | 29.114 | 79 | 56 | 0 | 131 | 209 | 7 | 85 | 1.58e-11 | 59.7 |
| Msa1432620 | MtrunA17_Chr7g0267571 | 30.189 | 106 | 73 | 1 | 132 | 236 | 212 | 317 | 8.40e-11 | 60.8 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1432620 | AT3G04500.1 | 77.665 | 197 | 40 | 3 | 45 | 240 | 52 | 245 | 1.40e-110 | 318 |
| Msa1432620 | AT3G04500.3 | 76.471 | 119 | 24 | 3 | 45 | 162 | 52 | 167 | 3.32e-60 | 188 |
| Msa1432620 | AT3G04500.2 | 80.180 | 111 | 19 | 2 | 55 | 164 | 61 | 169 | 3.38e-60 | 187 |
| Msa1432620 | AT3G14100.1 | 43.243 | 74 | 42 | 0 | 132 | 205 | 144 | 217 | 1.87e-15 | 75.5 |
| Msa1432620 | AT1G54080.1 | 44.595 | 74 | 41 | 0 | 132 | 205 | 148 | 221 | 2.41e-15 | 75.1 |
| Msa1432620 | AT1G17370.1 | 35.484 | 93 | 57 | 1 | 132 | 224 | 139 | 228 | 5.84e-15 | 73.9 |
| Msa1432620 | AT1G17370.2 | 35.484 | 93 | 57 | 1 | 132 | 224 | 139 | 228 | 6.20e-15 | 73.9 |
| Msa1432620 | AT5G54900.1 | 43.421 | 76 | 42 | 1 | 131 | 205 | 153 | 228 | 3.31e-14 | 71.6 |
| Msa1432620 | AT3G19130.1 | 43.421 | 76 | 42 | 1 | 131 | 205 | 201 | 276 | 4.20e-14 | 71.2 |
| Msa1432620 | AT4G27000.1 | 41.975 | 81 | 44 | 2 | 125 | 204 | 168 | 246 | 8.42e-14 | 70.5 |
| Msa1432620 | AT1G11650.1 | 42.105 | 76 | 43 | 1 | 131 | 205 | 154 | 229 | 8.46e-14 | 69.7 |
| Msa1432620 | AT1G54080.2 | 42.308 | 78 | 41 | 1 | 132 | 205 | 148 | 225 | 8.77e-14 | 70.5 |
| Msa1432620 | AT1G11650.2 | 42.105 | 76 | 43 | 1 | 131 | 205 | 154 | 229 | 1.91e-13 | 69.3 |
| Msa1432620 | AT5G19350.2 | 40.789 | 76 | 44 | 1 | 131 | 205 | 115 | 190 | 2.58e-13 | 68.9 |
| Msa1432620 | AT5G19350.1 | 40.789 | 76 | 44 | 1 | 131 | 205 | 115 | 190 | 2.60e-13 | 68.9 |
| Msa1432620 | AT1G47490.2 | 35.632 | 87 | 55 | 1 | 131 | 216 | 196 | 282 | 1.00e-12 | 67.0 |
| Msa1432620 | AT3G23830.2 | 32.039 | 103 | 67 | 1 | 106 | 205 | 6 | 108 | 1.43e-12 | 63.5 |
| Msa1432620 | AT3G23830.1 | 32.039 | 103 | 67 | 1 | 106 | 205 | 6 | 108 | 1.43e-12 | 63.5 |
| Msa1432620 | AT1G49600.3 | 40.789 | 76 | 44 | 1 | 131 | 205 | 212 | 287 | 1.49e-12 | 67.0 |
| Msa1432620 | AT1G49600.2 | 40.789 | 76 | 44 | 1 | 131 | 205 | 212 | 287 | 1.49e-12 | 67.0 |
| Msa1432620 | AT1G49600.1 | 40.789 | 76 | 44 | 1 | 131 | 205 | 212 | 287 | 1.62e-12 | 66.6 |
| Msa1432620 | AT1G47490.1 | 35.632 | 87 | 55 | 1 | 131 | 216 | 196 | 282 | 2.40e-12 | 66.2 |
| Msa1432620 | AT4G39260.3 | 30.952 | 84 | 58 | 0 | 128 | 211 | 2 | 85 | 5.91e-12 | 60.5 |
| Msa1432620 | AT4G39260.2 | 30.488 | 82 | 57 | 0 | 128 | 209 | 2 | 83 | 6.44e-12 | 61.6 |
| Msa1432620 | AT1G47500.2 | 38.158 | 76 | 46 | 1 | 131 | 205 | 198 | 273 | 7.64e-12 | 64.3 |
| Msa1432620 | AT1G47500.1 | 38.158 | 76 | 46 | 1 | 131 | 205 | 198 | 273 | 1.29e-11 | 63.9 |
| Msa1432620 | AT4G39260.1 | 30.488 | 82 | 57 | 0 | 128 | 209 | 2 | 83 | 1.53e-11 | 61.6 |
| Msa1432620 | AT1G71770.1 | 23.741 | 139 | 100 | 3 | 79 | 212 | 284 | 421 | 5.75e-11 | 62.4 |
| Msa1432620 | AT1G71770.2 | 23.741 | 139 | 100 | 3 | 79 | 212 | 284 | 421 | 5.75e-11 | 62.4 |
| Msa1432620 | AT1G58470.2 | 34.177 | 79 | 50 | 1 | 130 | 208 | 4 | 80 | 9.56e-11 | 61.2 |
| Msa1432620 | AT1G58470.1 | 34.177 | 79 | 50 | 1 | 130 | 208 | 4 | 80 | 9.56e-11 | 61.2 |
Find 103 sgRNAs with CRISPR-Local
Find 324 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| ACTTACTCTTGCCATGTTAA+AGG | 0.192434 | tig0027132:-35136 | None:intergenic |
| ATACCGTACTGATGAATTAT+TGG | 0.195169 | tig0027132:+38125 | Msa1432620:three_prime_UTR |
| CCGAGGAACAGCTTTCTTCT+TGG | 0.222688 | tig0027132:-33777 | None:intergenic |
| CGGCTCTTCTGCGGTGATCT+TGG | 0.238216 | tig0027132:+35063 | Msa1432620:CDS |
| TCTAAAATCGCGTTTGGTTT+AGG | 0.252268 | tig0027132:-33283 | None:intergenic |
| AACCCGATTTATACATATTC+TGG | 0.256077 | tig0027132:-37924 | None:intergenic |
| ATCTTTAAATAGCACATTCT+TGG | 0.265302 | tig0027132:-38041 | None:intergenic |
| TAAGCAGCAGGCGGTGGAAC+GGG | 0.268956 | tig0027132:-33538 | None:intergenic |
| CGTTTGGTTTAGGTTTGTTT+GGG | 0.272698 | tig0027132:-33273 | None:intergenic |
| TTGTATAATCAGATGATTAT+CGG | 0.298287 | tig0027132:+35043 | Msa1432620:intron |
| GCGTTTGGTTTAGGTTTGTT+TGG | 0.326023 | tig0027132:-33274 | None:intergenic |
| GGCATTGGAATATGTGAATT+GGG | 0.328527 | tig0027132:-33404 | None:intergenic |
| CAATGTTTGATTGATCGAAT+TGG | 0.330230 | tig0027132:-33313 | None:intergenic |
| GGCTCTTCTGCGGTGATCTT+GGG | 0.342878 | tig0027132:+35064 | Msa1432620:CDS |
| TATTCTGCACAAGTGAAAAT+AGG | 0.344778 | tig0027132:+37901 | Msa1432620:exon |
| AGGCCAGAATATGTATAAAT+CGG | 0.347367 | tig0027132:+37921 | Msa1432620:three_prime_UTR |
| CGGAGGAAGCTGCACGGCGG+GGG | 0.354638 | tig0027132:-33500 | None:intergenic |
| CTTCCTCCGCCGCCAATTGT+CGG | 0.356289 | tig0027132:+33514 | Msa1432620:CDS |
| AATGTTTGATTGATCGAATT+GGG | 0.378975 | tig0027132:-33312 | None:intergenic |
| TGTTGAAGGTGAAAGGGAAC+GGG | 0.379503 | tig0027132:-33436 | None:intergenic |
| GGCGGAGGAAGCTGCACGGC+GGG | 0.390499 | tig0027132:-33502 | None:intergenic |
| AGCAGCAAGGTCAGCAGGGT+TGG | 0.390729 | tig0027132:-36815 | None:intergenic |
| GGAAAATCTAAAATCGCGTT+TGG | 0.394601 | tig0027132:-33289 | None:intergenic |
| CAGGTAAGTACGTCGGAAAT+CGG | 0.399897 | tig0027132:+37688 | Msa1432620:intron |
| GGGCATTGGAATATGTGAAT+TGG | 0.406105 | tig0027132:-33405 | None:intergenic |
| TCTTTAAATAGCACATTCTT+GGG | 0.409087 | tig0027132:-38040 | None:intergenic |
| GGTGGAACGGGGCCGACAAT+TGG | 0.409141 | tig0027132:-33526 | None:intergenic |
| TGAAAGGGAACGGGGAAGTA+AGG | 0.412150 | tig0027132:-33427 | None:intergenic |
| AGAGCAGCAGCAAGGTCAGC+AGG | 0.413814 | tig0027132:-36820 | None:intergenic |
| GGGCCGACAATTGGCGGCGG+AGG | 0.430346 | tig0027132:-33517 | None:intergenic |
| GCGGAGGAAGCTGCACGGCG+GGG | 0.443060 | tig0027132:-33501 | None:intergenic |
| GCGTAGTGAGAGGTGGTTGC+GGG | 0.445928 | tig0027132:-33460 | None:intergenic |
| ATATTTGTCAATATATTAAG+TGG | 0.448211 | tig0027132:-38095 | None:intergenic |
| CGGCGGAGGAAGCTGCACGG+CGG | 0.453429 | tig0027132:-33503 | None:intergenic |
| GGAACGGGGCCGACAATTGG+CGG | 0.457314 | tig0027132:-33523 | None:intergenic |
| GGAAAGCTGCAGGTCAAGCT+TGG | 0.458619 | tig0027132:+33798 | Msa1432620:CDS |
| ATTCCAATGTAACAAATTGA+AGG | 0.458975 | tig0027132:+37997 | Msa1432620:three_prime_UTR |
| AACGGGGAAGTAAGGGGCAT+TGG | 0.463371 | tig0027132:-33419 | None:intergenic |
| TCAGGCCACTCTGCAAGAAT+AGG | 0.467965 | tig0027132:-33827 | None:intergenic |
| GAAAGCTGCAGGTCAAGCTT+GGG | 0.471410 | tig0027132:+33799 | Msa1432620:CDS |
| TGCGGGTTGTTGAAGGTGAA+AGG | 0.471510 | tig0027132:-33443 | None:intergenic |
| GGTGGTGTCGTCATTGCAAT+TGG | 0.472771 | tig0027132:-33361 | None:intergenic |
| GTTGTTAGAGATAAGCGAAC+TGG | 0.476084 | tig0027132:+36760 | Msa1432620:CDS |
| AGATGTGTAAACCTCTCGTT+AGG | 0.479688 | tig0027132:+38060 | Msa1432620:three_prime_UTR |
| AGGTGGTTGCGGGTTGTTGA+AGG | 0.484864 | tig0027132:-33450 | None:intergenic |
| ACGGAGTAAGCAGCAGGCGG+TGG | 0.487179 | tig0027132:-33544 | None:intergenic |
| AAAGGGAACGGGGAAGTAAG+GGG | 0.493709 | tig0027132:-33425 | None:intergenic |
| GGCCAGAATATGTATAAATC+GGG | 0.496131 | tig0027132:+37922 | Msa1432620:three_prime_UTR |
| GTAAGCAGCAGGCGGTGGAA+CGG | 0.496822 | tig0027132:-33539 | None:intergenic |
| GAGAACTGATTATGATGCAT+TGG | 0.497577 | tig0027132:+37743 | Msa1432620:CDS |
| AAAGGGTATAACGTGACATA+AGG | 0.500921 | tig0027132:-38162 | None:intergenic |
| GAACCTTCAATTTGTTACAT+TGG | 0.502282 | tig0027132:-38000 | None:intergenic |
| TAAAACTACGCAAGAGTAAG+TGG | 0.505433 | tig0027132:+37715 | Msa1432620:CDS |
| AACTTTGGAACAGCATTCAA+AGG | 0.506140 | tig0027132:-38180 | None:intergenic |
| TTGTTGAAGGTGAAAGGGAA+CGG | 0.508796 | tig0027132:-33437 | None:intergenic |
| GAAAGGGAACGGGGAAGTAA+GGG | 0.516807 | tig0027132:-33426 | None:intergenic |
| ACTCTTGCCATGTTAAAGGA+AGG | 0.519304 | tig0027132:-35132 | None:intergenic |
| GCTGTTCCTCGGAAAGCTGC+AGG | 0.534181 | tig0027132:+33788 | Msa1432620:CDS |
| TGCGGAACGGAGTAAGCAGC+AGG | 0.541336 | tig0027132:-33550 | None:intergenic |
| ACTTTGGAACAGCATTCAAA+GGG | 0.543033 | tig0027132:-38179 | None:intergenic |
| GCGGGTTGTTGAAGGTGAAA+GGG | 0.543608 | tig0027132:-33442 | None:intergenic |
| CTCTTGCCATGTTAAAGGAA+GGG | 0.550026 | tig0027132:-35131 | None:intergenic |
| TCAATATATTAAGTGGCTTG+AGG | 0.551508 | tig0027132:-38088 | None:intergenic |
| TTCACATTCTCAAGAGCCTC+CGG | 0.552039 | tig0027132:-33713 | None:intergenic |
| GCGATTCCCTTCCTTTAACA+TGG | 0.564587 | tig0027132:+35125 | Msa1432620:CDS |
| AAGCAGCAGGCGGTGGAACG+GGG | 0.570100 | tig0027132:-33537 | None:intergenic |
| CCAAGAAGAAAGCTGTTCCT+CGG | 0.572765 | tig0027132:+33777 | Msa1432620:CDS |
| AGCTGCAGGTCAAGCTTGGG+AGG | 0.574905 | tig0027132:+33802 | Msa1432620:CDS |
| GGCGTAGTGAGAGGTGGTTG+CGG | 0.577840 | tig0027132:-33461 | None:intergenic |
| TCTTGGGAAAGAAAATCTAA+AGG | 0.578652 | tig0027132:-38024 | None:intergenic |
| CTCAACGTCGCTACTCGCAA+TGG | 0.579241 | tig0027132:-33741 | None:intergenic |
| GCTTGACCTGCAGCTTTCCG+AGG | 0.583099 | tig0027132:-33794 | None:intergenic |
| AAACCAATAATTCATCAGTA+CGG | 0.589880 | tig0027132:-38128 | None:intergenic |
| GTTGAAGGTGAAAGGGAACG+GGG | 0.590747 | tig0027132:-33435 | None:intergenic |
| GCTGCTCTTAAAGAAATGAA+TGG | 0.593104 | tig0027132:+36835 | Msa1432620:CDS |
| ATTCTTGCAGAGTGGCCTGA+AGG | 0.594669 | tig0027132:+33830 | Msa1432620:CDS |
| ATGTTTGATTGATCGAATTG+GGG | 0.604585 | tig0027132:-33311 | None:intergenic |
| GAGCAGCAGCAAGGTCAGCA+GGG | 0.605494 | tig0027132:-36819 | None:intergenic |
| GTAGGGTGCGGCGTAGTGAG+AGG | 0.607879 | tig0027132:-33470 | None:intergenic |
| GATGATTATCGGCTCTTCTG+CGG | 0.609558 | tig0027132:+35054 | Msa1432620:intron |
| GGGTGCGGCGTAGTGAGAGG+TGG | 0.612059 | tig0027132:-33467 | None:intergenic |
| GGCTCTTGAGAATGTGAAGG+CGG | 0.612668 | tig0027132:+33718 | Msa1432620:CDS |
| ACGGGGCCGACAATTGGCGG+CGG | 0.614773 | tig0027132:-33520 | None:intergenic |
| GGTTGAGATGATGAGGATGA+AGG | 0.616374 | tig0027132:-33382 | None:intergenic |
| TGGAACGAATCGTGAATCGA+TGG | 0.619092 | tig0027132:-33341 | None:intergenic |
| TGATGCATTGGAGAAACAGA+AGG | 0.623280 | tig0027132:+37755 | Msa1432620:CDS |
| TGGCGGCGGAGGAAGCTGCA+CGG | 0.623515 | tig0027132:-33506 | None:intergenic |
| GCATTGGAATATGTGAATTG+GGG | 0.628373 | tig0027132:-33403 | None:intergenic |
| GTTTGGTTTAGGTTTGTTTG+GGG | 0.629522 | tig0027132:-33272 | None:intergenic |
| TTTCTTTAAGAGCAGCAGCA+AGG | 0.635705 | tig0027132:-36828 | None:intergenic |
| AACTACGCAAGAGTAAGTGG+AGG | 0.640310 | tig0027132:+37718 | Msa1432620:CDS |
| TGTTTGATTGATCGAATTGG+GGG | 0.641436 | tig0027132:-33310 | None:intergenic |
| GGAGGCTCTTGAGAATGTGA+AGG | 0.648124 | tig0027132:+33715 | Msa1432620:CDS |
| TTGAGGCATAACCTAACGAG+AGG | 0.655493 | tig0027132:-38071 | None:intergenic |
| TTGGTTTCAGGTAAGTACGT+CGG | 0.656926 | tig0027132:+37681 | Msa1432620:intron |
| TGAGATGATGAGGATGAAGG+TGG | 0.660814 | tig0027132:-33379 | None:intergenic |
| AGGATCCTATTCTTGCAGAG+TGG | 0.663088 | tig0027132:+33822 | Msa1432620:CDS |
| TGCACAGATAATTACGCCGG+AGG | 0.666682 | tig0027132:+33697 | Msa1432620:CDS |
| ACTACGCAAGAGTAAGTGGA+GGG | 0.675815 | tig0027132:+37719 | Msa1432620:CDS |
| GAATTGGGGTTGAGATGATG+AGG | 0.677929 | tig0027132:-33389 | None:intergenic |
| AGATGCACAGATAATTACGC+CGG | 0.679077 | tig0027132:+33694 | Msa1432620:CDS |
| ACTAACTTGATATTGCGGAA+CGG | 0.692194 | tig0027132:-33563 | None:intergenic |
| GGAACGGAGTAAGCAGCAGG+CGG | 0.735035 | tig0027132:-33547 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | AAAATCTAAAATCTAAAAAT+TGG | - | tig0027132:33221-33240 | None:intergenic | 10.0% |
| !! | AAATAAATTAATTAACGAAT+TGG | - | tig0027132:33899-33918 | None:intergenic | 10.0% |
| !!! | AATTATATTTTTGTAAACAA+TGG | - | tig0027132:36228-36247 | None:intergenic | 10.0% |
| !!! | AACATAAAAACTTTTTTATT+TGG | - | tig0027132:36413-36432 | None:intergenic | 10.0% |
| !! | AATGTGAAAATTAAAAATAA+TGG | - | tig0027132:36626-36645 | None:intergenic | 10.0% |
| !!! | AAATTATCAATTTAGAATAT+GGG | + | tig0027132:37130-37149 | Msa1432620:intron | 10.0% |
| !!! | TTCTTTTATACATAAATAAA+TGG | + | tig0027132:37231-37250 | Msa1432620:intron | 10.0% |
| !!! | ATTTTAGAATAAGAAAATTC+TGG | + | tig0027132:33236-33255 | Msa1432620:five_prime_UTR | 15.0% |
| !! | TTTAATGTATATTGGAAATT+TGG | + | tig0027132:33917-33936 | Msa1432620:intron | 15.0% |
| !!! | TATATCTGATATTTTTTGAA+AGG | + | tig0027132:34576-34595 | Msa1432620:intron | 15.0% |
| !!! | AATTCTTTTATTTTTAGTTG+TGG | + | tig0027132:35178-35197 | Msa1432620:intron | 15.0% |
| !!! | TTCATAATTTACATTTTATC+AGG | + | tig0027132:35295-35314 | Msa1432620:intron | 15.0% |
| !!! | GTTATTTATTTTGTTTGTTA+CGG | + | tig0027132:35484-35503 | Msa1432620:intron | 15.0% |
| !!! | TTATTTATTTTGTTTGTTAC+GGG | + | tig0027132:35485-35504 | Msa1432620:intron | 15.0% |
| !! | AAACTTGTAAATTTATATAC+GGG | - | tig0027132:35560-35579 | None:intergenic | 15.0% |
| !! | CAAACTTGTAAATTTATATA+CGG | - | tig0027132:35561-35580 | None:intergenic | 15.0% |
| !!! | TTTGTAATTTGTTTTGATTA+AGG | + | tig0027132:36718-36737 | Msa1432620:intron | 15.0% |
| !!! | ATAATATTGACTTTTTAGTT+AGG | + | tig0027132:36962-36981 | Msa1432620:intron | 15.0% |
| !!! | TAATATTGACTTTTTAGTTA+GGG | + | tig0027132:36963-36982 | Msa1432620:intron | 15.0% |
| !!! | GAAATTATCAATTTAGAATA+TGG | + | tig0027132:37129-37148 | Msa1432620:intron | 15.0% |
| !!! | AATTATCAATTTAGAATATG+GGG | + | tig0027132:37131-37150 | Msa1432620:intron | 15.0% |
| !!! | TACATAAATAAATGGATTTA+TGG | + | tig0027132:37239-37258 | Msa1432620:intron | 15.0% |
| !! | ATATTTGTCAATATATTAAG+TGG | - | tig0027132:38098-38117 | None:intergenic | 15.0% |
| !! | AAAAAACTAACTTGATATTG+CGG | - | tig0027132:33571-33590 | None:intergenic | 20.0% |
| !!! | TCTTCTTTTCAATTTGTATT+TGG | + | tig0027132:33593-33612 | Msa1432620:intron | 20.0% |
| !! | TTCAATTTGTATTTGGAAAT+TGG | + | tig0027132:33600-33619 | Msa1432620:intron | 20.0% |
| !! | TCAATTTGTATTTGGAAATT+GGG | + | tig0027132:33601-33620 | Msa1432620:intron | 20.0% |
| !! | AATGTAGGTTATTTATCATA+GGG | + | tig0027132:34401-34420 | Msa1432620:intron | 20.0% |
| !!! | GATTGTGAAATTAAAGTTTT+TGG | + | tig0027132:34470-34489 | Msa1432620:intron | 20.0% |
| !!! | AAATTAAAGTTTTTGGTGTA+GGG | + | tig0027132:34477-34496 | Msa1432620:intron | 20.0% |
| !! | TCCTTAATTTAAAGAAGAAA+AGG | + | tig0027132:34664-34683 | Msa1432620:intron | 20.0% |
| !!! | TCCTTTTCTTCTTTAAATTA+AGG | - | tig0027132:34668-34687 | None:intergenic | 20.0% |
| !! | ACAAGTTAGATAACTATTTA+TGG | + | tig0027132:35001-35020 | Msa1432620:intron | 20.0% |
| !! | TAATCATCTGATTATACAAA+AGG | - | tig0027132:35042-35061 | None:intergenic | 20.0% |
| !! | TTGTATAATCAGATGATTAT+CGG | + | tig0027132:35043-35062 | Msa1432620:intron | 20.0% |
| !! | TAAAATGTAAATTATGAAGC+AGG | - | tig0027132:35293-35312 | None:intergenic | 20.0% |
| !! | CGTATATAAATTTACAAGTT+TGG | + | tig0027132:35559-35578 | Msa1432620:intron | 20.0% |
| !! | TTCATTTGTGATGATAAAAT+TGG | + | tig0027132:36011-36030 | Msa1432620:intron | 20.0% |
| !! | TAAAAATAAGTCAATCCAAA+CGG | - | tig0027132:36369-36388 | None:intergenic | 20.0% |
| !! | ATTATTTGCAAATATGTTTG+TGG | + | tig0027132:36682-36701 | Msa1432620:intron | 20.0% |
| !! | ACTAAAAAGTCAATATTATC+TGG | - | tig0027132:36961-36980 | None:intergenic | 20.0% |
| !! | TCAAATAATTAAGTGAAGTT+TGG | + | tig0027132:37498-37517 | Msa1432620:intron | 20.0% |
| ! | AATGTTTGATTGATCGAATT+GGG | - | tig0027132:33315-33334 | None:intergenic | 25.0% |
| ! | TGCAAGTGTAAAAATATGTT+TGG | + | tig0027132:34014-34033 | Msa1432620:intron | 25.0% |
| !!! | AGAATTGATTTTGACATGTT+TGG | - | tig0027132:34113-34132 | None:intergenic | 25.0% |
| ! | CAAGAATACAATTTCCATAT+AGG | - | tig0027132:34213-34232 | None:intergenic | 25.0% |
| ! | CAATGTAGGTTATTTATCAT+AGG | + | tig0027132:34400-34419 | Msa1432620:intron | 25.0% |
| ! | ATGTAGGTTATTTATCATAG+GGG | + | tig0027132:34402-34421 | Msa1432620:intron | 25.0% |
| !!! | GAAATTAAAGTTTTTGGTGT+AGG | + | tig0027132:34476-34495 | Msa1432620:intron | 25.0% |
| ! | AATAAAACTTAGGGAATGTT+TGG | - | tig0027132:34721-34740 | None:intergenic | 25.0% |
| !!! | TTTTATTTTTAGTTGTGGCT+GGG | + | tig0027132:35183-35202 | Msa1432620:intron | 25.0% |
| !!! | TTCTCAGATTTTTGTTTGAA+GGG | + | tig0027132:35230-35249 | Msa1432620:intron | 25.0% |
| ! | TCATATTTGAGCTTATATAC+AGG | - | tig0027132:35831-35850 | None:intergenic | 25.0% |
| ! | TACACACAATTGCATATAAA+TGG | + | tig0027132:37181-37200 | Msa1432620:intron | 25.0% |
| ! | ACACACAATTGCATATAAAT+GGG | + | tig0027132:37182-37201 | Msa1432620:intron | 25.0% |
| !! | ATGGGTTATAAATTATACGA+TGG | + | tig0027132:37200-37219 | Msa1432620:intron | 25.0% |
| ! | AATAACTGATCTCATCTATT+TGG | + | tig0027132:37579-37598 | Msa1432620:intron | 25.0% |
| ! | AAACAACAAAGGAATTAAGT+TGG | - | tig0027132:37834-37853 | None:intergenic | 25.0% |
| !! | ATACTCTTTCTTGACATTTT+TGG | - | tig0027132:37884-37903 | None:intergenic | 25.0% |
| ! | ATTCCAATGTAACAAATTGA+AGG | + | tig0027132:37997-38016 | Msa1432620:three_prime_UTR | 25.0% |
| ! | TCTTTAAATAGCACATTCTT+GGG | - | tig0027132:38043-38062 | None:intergenic | 25.0% |
| ! | ATCTTTAAATAGCACATTCT+TGG | - | tig0027132:38044-38063 | None:intergenic | 25.0% |
| ! | AAACCAATAATTCATCAGTA+CGG | - | tig0027132:38131-38150 | None:intergenic | 25.0% |
| ATGTTTGATTGATCGAATTG+GGG | - | tig0027132:33314-33333 | None:intergenic | 30.0% | |
| CAATGTTTGATTGATCGAAT+TGG | - | tig0027132:33316-33335 | None:intergenic | 30.0% | |
| GAAATTGGGAAAAGAGAATT+TGG | + | tig0027132:33615-33634 | Msa1432620:intron | 30.0% | |
| ! | ATCGATTCTAACTTAAAGCT+AGG | - | tig0027132:34057-34076 | None:intergenic | 30.0% |
| CATGTTTCATTGAAGTGATT+TGG | + | tig0027132:34151-34170 | Msa1432620:intron | 30.0% | |
| !! | CTAGGAAGGTTTTTCAATTT+TGG | + | tig0027132:34286-34305 | Msa1432620:intron | 30.0% |
| TCATGATATGTTCACATGTA+AGG | + | tig0027132:34331-34350 | Msa1432620:intron | 30.0% | |
| GAAACAAGATATTGCAATGT+AGG | + | tig0027132:34386-34405 | Msa1432620:intron | 30.0% | |
| ! | TATTTATCATAGGGGTCTTT+TGG | + | tig0027132:34410-34429 | Msa1432620:intron | 30.0% |
| AACTCTCAAACACATTCTTA+AGG | - | tig0027132:34504-34523 | None:intergenic | 30.0% | |
| ! | GGACTGGTAAATAAAACTTA+GGG | - | tig0027132:34730-34749 | None:intergenic | 30.0% |
| GAGATGAAACAAACATAACA+GGG | - | tig0027132:34797-34816 | None:intergenic | 30.0% | |
| AGAGATGAAACAAACATAAC+AGG | - | tig0027132:34798-34817 | None:intergenic | 30.0% | |
| GAGTTACATGAAAACAGTAA+TGG | - | tig0027132:34834-34853 | None:intergenic | 30.0% | |
| TTTCATGTAACTCTTACACT+TGG | + | tig0027132:34841-34860 | Msa1432620:intron | 30.0% | |
| TATGATATGCACGATTCAAT+TGG | + | tig0027132:34897-34916 | Msa1432620:intron | 30.0% | |
| !!! | CTTTTATTTTTAGTTGTGGC+TGG | + | tig0027132:35182-35201 | Msa1432620:intron | 30.0% |
| !! | CTTCTCAGATTTTTGTTTGA+AGG | + | tig0027132:35229-35248 | Msa1432620:intron | 30.0% |
| TTAACGATTTGTGTATCGTA+AGG | + | tig0027132:35262-35281 | Msa1432620:intron | 30.0% | |
| GGGCACTTGAAATTATTAAA+TGG | + | tig0027132:35400-35419 | Msa1432620:intron | 30.0% | |
| AATTCCACAATACTTTCTAG+GGG | - | tig0027132:35603-35622 | None:intergenic | 30.0% | |
| GAATTCCACAATACTTTCTA+GGG | - | tig0027132:35604-35623 | None:intergenic | 30.0% | |
| TTCAATAATACGATCCTGTT+TGG | + | tig0027132:35625-35644 | Msa1432620:intron | 30.0% | |
| ! | GTCGATTTAATAAGCTATCA+TGG | + | tig0027132:35716-35735 | Msa1432620:intron | 30.0% |
| TGAAATAAGTCAATCCAAAC+AGG | + | tig0027132:35848-35867 | Msa1432620:intron | 30.0% | |
| TAAGGATTCAAATAGTGTGT+TGG | + | tig0027132:35883-35902 | Msa1432620:intron | 30.0% | |
| ! | ATTTTGTTACCAGAAAGAAG+AGG | + | tig0027132:36309-36328 | Msa1432620:intron | 30.0% |
| ! | TTTTGTTACCAGAAAGAAGA+GGG | + | tig0027132:36310-36329 | Msa1432620:intron | 30.0% |
| TGAGAGTGGATATATACTTA+TGG | + | tig0027132:36342-36361 | Msa1432620:intron | 30.0% | |
| ATATATACTTATGGTCCGTT+TGG | + | tig0027132:36351-36370 | Msa1432620:intron | 30.0% | |
| TTCATATGAAATTAAGCGTC+TGG | - | tig0027132:36579-36598 | None:intergenic | 30.0% | |
| TCATGTCTAAATATCTGCTT+TGG | + | tig0027132:36912-36931 | Msa1432620:intron | 30.0% | |
| !!! | GACTTTTTAGTTAGGGATAT+AGG | + | tig0027132:36970-36989 | Msa1432620:intron | 30.0% |
| ACAATTCTACCATAGATGAT+TGG | + | tig0027132:37330-37349 | Msa1432620:intron | 30.0% | |
| !!! | TTACTCTTGCGTAGTTTTAT+TGG | - | tig0027132:37714-37733 | None:intergenic | 30.0% |
| !!! | TTTTTGGCTTCTTCTGAATA+TGG | - | tig0027132:37868-37887 | None:intergenic | 30.0% |
| TATTCTGCACAAGTGAAAAT+AGG | + | tig0027132:37901-37920 | Msa1432620:exon | 30.0% | |
| AGGCCAGAATATGTATAAAT+CGG | + | tig0027132:37921-37940 | Msa1432620:three_prime_UTR | 30.0% | |
| AACCCGATTTATACATATTC+TGG | - | tig0027132:37927-37946 | None:intergenic | 30.0% | |
| !! | GAACCTTCAATTTGTTACAT+TGG | - | tig0027132:38003-38022 | None:intergenic | 30.0% |
| TCTTGGGAAAGAAAATCTAA+AGG | - | tig0027132:38027-38046 | None:intergenic | 30.0% | |
| TCAATATATTAAGTGGCTTG+AGG | - | tig0027132:38091-38110 | None:intergenic | 30.0% | |
| ! | ATACCGTACTGATGAATTAT+TGG | + | tig0027132:38125-38144 | Msa1432620:three_prime_UTR | 30.0% |
| ! | GTTTGGTTTAGGTTTGTTTG+GGG | - | tig0027132:33275-33294 | None:intergenic | 35.0% |
| ! | CGTTTGGTTTAGGTTTGTTT+GGG | - | tig0027132:33276-33295 | None:intergenic | 35.0% |
| ! | TCTAAAATCGCGTTTGGTTT+AGG | - | tig0027132:33286-33305 | None:intergenic | 35.0% |
| ! | GGAAAATCTAAAATCGCGTT+TGG | - | tig0027132:33292-33311 | None:intergenic | 35.0% |
| TGTTTGATTGATCGAATTGG+GGG | - | tig0027132:33313-33332 | None:intergenic | 35.0% | |
| GCATTGGAATATGTGAATTG+GGG | - | tig0027132:33406-33425 | None:intergenic | 35.0% | |
| ! | GGCATTGGAATATGTGAATT+GGG | - | tig0027132:33407-33426 | None:intergenic | 35.0% |
| ACTAACTTGATATTGCGGAA+CGG | - | tig0027132:33566-33585 | None:intergenic | 35.0% | |
| ATTGTGTTGTGTGATTGAAC+AGG | + | tig0027132:33652-33671 | Msa1432620:intron | 35.0% | |
| CATGATGATACAATACCTTC+AGG | - | tig0027132:33848-33867 | None:intergenic | 35.0% | |
| ATTGGAAATTTGGTTGTGAG+AGG | + | tig0027132:33927-33946 | Msa1432620:intron | 35.0% | |
| GTCAAAATCAATTATGCGTG+AGG | + | tig0027132:34083-34102 | Msa1432620:intron | 35.0% | |
| !! | ATTTTGGTCTGTTGAGTGTA+TGG | + | tig0027132:34302-34321 | Msa1432620:intron | 35.0% |
| ! | TGTGTTTGAGAGTTGAGTTT+TGG | + | tig0027132:34510-34529 | Msa1432620:intron | 35.0% |
| !!! | TTTGAGAGTTGAGTTTTGGA+GGG | + | tig0027132:34514-34533 | Msa1432620:intron | 35.0% |
| ! | AATGTTTGGATGGAGAGTTT+TGG | - | tig0027132:34707-34726 | None:intergenic | 35.0% |
| AAACTTAGGGAATGTTTGGA+TGG | - | tig0027132:34717-34736 | None:intergenic | 35.0% | |
| ! | GGGACTGGTAAATAAAACTT+AGG | - | tig0027132:34731-34750 | None:intergenic | 35.0% |
| !!! | TCCCCAGTCTTTTTTGTTTA+TGG | + | tig0027132:34747-34766 | Msa1432620:intron | 35.0% |
| CCCATAAACAAAAAAGACTG+GGG | - | tig0027132:34751-34770 | None:intergenic | 35.0% | |
| !!! | CCCCAGTCTTTTTTGTTTAT+GGG | + | tig0027132:34748-34767 | Msa1432620:intron | 35.0% |
| CCCCATAAACAAAAAAGACT+GGG | - | tig0027132:34752-34771 | None:intergenic | 35.0% | |
| !!! | CCCAGTCTTTTTTGTTTATG+GGG | + | tig0027132:34749-34768 | Msa1432620:intron | 35.0% |
| ! | GTTTATGGGGCTTATTGTTT+TGG | + | tig0027132:34762-34781 | Msa1432620:intron | 35.0% |
| CATGAAAACAGTAATGGTTG+AGG | - | tig0027132:34828-34847 | None:intergenic | 35.0% | |
| TAAGAACAAGAGAGGATCAA+CGG | - | tig0027132:34879-34898 | None:intergenic | 35.0% | |
| GCATATCATAAGAACAAGAG+AGG | - | tig0027132:34887-34906 | None:intergenic | 35.0% | |
| !!! | GGCGATGGATTCTATTTTTT+AGG | + | tig0027132:34918-34937 | Msa1432620:intron | 35.0% |
| ACTTACTCTTGCCATGTTAA+AGG | - | tig0027132:35139-35158 | None:intergenic | 35.0% | |
| TTTAACATGGCAAGAGTAAG+TGG | + | tig0027132:35138-35157 | Msa1432620:intron | 35.0% | |
| TTAACATGGCAAGAGTAAGT+GGG | + | tig0027132:35139-35158 | Msa1432620:intron | 35.0% | |
| ! | ATACACTATTTTGTCATCCC+AGG | + | tig0027132:35338-35357 | Msa1432620:intron | 35.0% |
| ! | TACACTATTTTGTCATCCCA+GGG | + | tig0027132:35339-35358 | Msa1432620:intron | 35.0% |
| TGTGAACAATGAGCAATGAA+TGG | - | tig0027132:35374-35393 | None:intergenic | 35.0% | |
| TTTGTTACGGGATCTCAAAT+CGG | + | tig0027132:35497-35516 | Msa1432620:intron | 35.0% | |
| CGAATTCCACAATACTTTCT+AGG | - | tig0027132:35605-35624 | None:intergenic | 35.0% | |
| AAACTGTTTGGTAGAGCTTA+TGG | - | tig0027132:35794-35813 | None:intergenic | 35.0% | |
| GAAACACTAGTGAAACTGTT+TGG | - | tig0027132:35806-35825 | None:intergenic | 35.0% | |
| ! | TTCAAATAGTGTGTTGGCAA+AGG | + | tig0027132:35889-35908 | Msa1432620:intron | 35.0% |
| ! | TCAAATAGTGTGTTGGCAAA+GGG | + | tig0027132:35890-35909 | Msa1432620:intron | 35.0% |
| ATCTGCATTTACATCAAGTC+TGG | + | tig0027132:36154-36173 | Msa1432620:intron | 35.0% | |
| CATAAAGTAACCCAGAATGA+AGG | - | tig0027132:36200-36219 | None:intergenic | 35.0% | |
| TATTGTTCATACGCTTGTCA+AGG | - | tig0027132:36495-36514 | None:intergenic | 35.0% | |
| TATGAAATTAAGCGTCTGGT+TGG | - | tig0027132:36575-36594 | None:intergenic | 35.0% | |
| AGGTATCTTTGATCTTGTCT+AGG | + | tig0027132:36738-36757 | Msa1432620:intron | 35.0% | |
| TAAGCGAACTGGAAAAACAA+AGG | + | tig0027132:36771-36790 | Msa1432620:CDS | 35.0% | |
| AAGCGAACTGGAAAAACAAA+GGG | + | tig0027132:36772-36791 | Msa1432620:CDS | 35.0% | |
| GCTGCTCTTAAAGAAATGAA+TGG | + | tig0027132:36835-36854 | Msa1432620:CDS | 35.0% | |
| TAGGTTTGCCAAAATCAACA+AGG | + | tig0027132:36989-37008 | Msa1432620:intron | 35.0% | |
| !!! | TCAAACCTTGCTGTTGATTT+TGG | - | tig0027132:37111-37130 | None:intergenic | 35.0% |
| ! | TCAATGACGGAATTCAACAA+TGG | - | tig0027132:37276-37295 | None:intergenic | 35.0% |
| ATTGTTGAATTCCGTCATTG+AGG | + | tig0027132:37275-37294 | Msa1432620:intron | 35.0% | |
| GAGTGATATTATCAGCAAGA+AGG | + | tig0027132:37377-37396 | Msa1432620:intron | 35.0% | |
| GTAACATGAGTTCCTATCAT+AGG | + | tig0027132:37399-37418 | Msa1432620:intron | 35.0% | |
| ACTGATCTCATCTATTTGGA+AGG | + | tig0027132:37583-37602 | Msa1432620:intron | 35.0% | |
| !! | ATCTATTTGGAAGGTGCTTT+GGG | + | tig0027132:37592-37611 | Msa1432620:intron | 35.0% |
| AAACCAAGATATCGAAGTCA+GGG | - | tig0027132:37668-37687 | None:intergenic | 35.0% | |
| TAAAACTACGCAAGAGTAAG+TGG | + | tig0027132:37715-37734 | Msa1432620:CDS | 35.0% | |
| GAGAACTGATTATGATGCAT+TGG | + | tig0027132:37743-37762 | Msa1432620:CDS | 35.0% | |
| TTCTGCAATGCAAACAACAA+AGG | - | tig0027132:37845-37864 | None:intergenic | 35.0% | |
| GGCCAGAATATGTATAAATC+GGG | + | tig0027132:37922-37941 | Msa1432620:three_prime_UTR | 35.0% | |
| ! | AAAGGGTATAACGTGACATA+AGG | - | tig0027132:38165-38184 | None:intergenic | 35.0% |
| ! | GCGTTTGGTTTAGGTTTGTT+TGG | - | tig0027132:33277-33296 | None:intergenic | 40.0% |
| !! | GGGCATTGGAATATGTGAAT+TGG | - | tig0027132:33408-33427 | None:intergenic | 40.0% |
| TTGTTGAAGGTGAAAGGGAA+CGG | - | tig0027132:33440-33459 | None:intergenic | 40.0% | |
| AGATGCACAGATAATTACGC+CGG | + | tig0027132:33694-33713 | Msa1432620:CDS | 40.0% | |
| ACAATTTCCATATAGGCTCG+TGG | - | tig0027132:34206-34225 | None:intergenic | 40.0% | |
| TAACATACGAACGTAGTGAC+TGG | + | tig0027132:34247-34266 | Msa1432620:intron | 40.0% | |
| !! | GTTTGAGAGTTGAGTTTTGG+AGG | + | tig0027132:34513-34532 | Msa1432620:intron | 40.0% |
| !!! | TTGAGAGTTGAGTTTTGGAG+GGG | + | tig0027132:34515-34534 | Msa1432620:intron | 40.0% |
| !! | TTTGGATGGAGAGTTTTGGT+GGG | - | tig0027132:34703-34722 | None:intergenic | 40.0% |
| AAACAAAAAAGACTGGGGAC+TGG | - | tig0027132:34746-34765 | None:intergenic | 40.0% | |
| GCCCCATAAACAAAAAAGAC+TGG | - | tig0027132:34753-34772 | None:intergenic | 40.0% | |
| !!! | GGGCTTATTGTTTTGGAAGT+TGG | + | tig0027132:34769-34788 | Msa1432620:intron | 40.0% |
| CTCTTGCCATGTTAAAGGAA+GGG | - | tig0027132:35134-35153 | None:intergenic | 40.0% | |
| ACTCTTGCCATGTTAAAGGA+AGG | - | tig0027132:35135-35154 | None:intergenic | 40.0% | |
| CGATTTGTGTATCGTAAGGT+AGG | + | tig0027132:35266-35285 | Msa1432620:intron | 40.0% | |
| TGAATGGTGAAAGAAACCCT+GGG | - | tig0027132:35358-35377 | None:intergenic | 40.0% | |
| ATGAATGGTGAAAGAAACCC+TGG | - | tig0027132:35359-35378 | None:intergenic | 40.0% | |
| TGCTCATTGTTCACAAAGCA+CGG | + | tig0027132:35379-35398 | Msa1432620:intron | 40.0% | |
| GGATCTCAAATCGGTTGAAT+TGG | + | tig0027132:35506-35525 | Msa1432620:intron | 40.0% | |
| AAATCGGTTGAATTGGAGTC+AGG | + | tig0027132:35513-35532 | Msa1432620:intron | 40.0% | |
| !! | CTTTCCCCTAGAAAGTATTG+TGG | + | tig0027132:35596-35615 | Msa1432620:intron | 40.0% |
| ! | GTTGAGGTGTTTATCCAAAC+AGG | - | tig0027132:35642-35661 | None:intergenic | 40.0% |
| ACGCTATAAGTGCTTAGTTG+AGG | - | tig0027132:35658-35677 | None:intergenic | 40.0% | |
| AAGCTATCATGGAGAGCTTA+TGG | + | tig0027132:35727-35746 | Msa1432620:intron | 40.0% | |
| GAGCTTATGGAAACAGCATA+TGG | - | tig0027132:35781-35800 | None:intergenic | 40.0% | |
| TCAATCCAAACAGGCTCATA+TGG | + | tig0027132:35857-35876 | Msa1432620:intron | 40.0% | |
| TATTGCCATATGAGCCTGTT+TGG | - | tig0027132:35865-35884 | None:intergenic | 40.0% | |
| AACAGGCTCATATGGCAATA+AGG | + | tig0027132:35865-35884 | Msa1432620:intron | 40.0% | |
| ! | CAAATAGTGTGTTGGCAAAG+GGG | + | tig0027132:35891-35910 | Msa1432620:intron | 40.0% |
| AAATATTCCCACCCATAACG+AGG | + | tig0027132:35932-35951 | Msa1432620:intron | 40.0% | |
| AATATTCCCACCCATAACGA+GGG | + | tig0027132:35933-35952 | Msa1432620:intron | 40.0% | |
| TCTCACTTATCCCTCGTTAT+GGG | - | tig0027132:35946-35965 | None:intergenic | 40.0% | |
| !! | TTTGAAAGCACCCTTATCTC+TGG | - | tig0027132:35990-36009 | None:intergenic | 40.0% |
| GTTGACTGATTATTGAGCCA+AGG | + | tig0027132:36094-36113 | Msa1432620:intron | 40.0% | |
| CACTAGAGAAGGAAATACCT+TGG | - | tig0027132:36114-36133 | None:intergenic | 40.0% | |
| ! | CAAGGTATTTCCTTCTCTAG+TGG | + | tig0027132:36112-36131 | Msa1432620:intron | 40.0% |
| TTCACACATTCCACTAGAGA+AGG | - | tig0027132:36125-36144 | None:intergenic | 40.0% | |
| CTAATCAGAGCCTTCATTCT+GGG | + | tig0027132:36187-36206 | Msa1432620:intron | 40.0% | |
| CTAGTTAACACTTAGCAGAC+AGG | - | tig0027132:36652-36671 | None:intergenic | 40.0% | |
| GTTGTTAGAGATAAGCGAAC+TGG | + | tig0027132:36760-36779 | Msa1432620:CDS | 40.0% | |
| ACTGGAAAAACAAAGGGCTA+TGG | + | tig0027132:36778-36797 | Msa1432620:CDS | 40.0% | |
| ! | TTTCTTTAAGAGCAGCAGCA+AGG | - | tig0027132:36831-36850 | None:intergenic | 40.0% |
| !!! | AGCAGCTTCCTTGTTGATTT+TGG | - | tig0027132:37000-37019 | None:intergenic | 40.0% |
| GTTTGCCAAAATCAACAGCA+AGG | + | tig0027132:37103-37122 | Msa1432620:intron | 40.0% | |
| ACGGAATTCAACAATGGCAT+TGG | - | tig0027132:37270-37289 | None:intergenic | 40.0% | |
| GCTTCTTATTGCCTCAATGA+CGG | - | tig0027132:37289-37308 | None:intergenic | 40.0% | |
| CATTGAGGCAATAAGAAGCA+AGG | + | tig0027132:37290-37309 | Msa1432620:intron | 40.0% | |
| CATGTCAGCTTTCCTATGAT+AGG | - | tig0027132:37414-37433 | None:intergenic | 40.0% | |
| AGCTGACATGTTCTTGTTCT+AGG | + | tig0027132:37424-37443 | Msa1432620:intron | 40.0% | |
| ! | TGACATGTTCTTGTTCTAGG+TGG | + | tig0027132:37427-37446 | Msa1432620:intron | 40.0% |
| ! | TGTTCTTGTTCTAGGTGGTT+TGG | + | tig0027132:37432-37451 | Msa1432620:intron | 40.0% |
| TTTGGACGTGTGGAAAAGAT+AGG | + | tig0027132:37450-37469 | Msa1432620:intron | 40.0% | |
| CATGACGACATAATGTCTCA+TGG | - | tig0027132:37552-37571 | None:intergenic | 40.0% | |
| !! | CATCTATTTGGAAGGTGCTT+TGG | + | tig0027132:37591-37610 | Msa1432620:intron | 40.0% |
| GAAACCAAGATATCGAAGTC+AGG | - | tig0027132:37669-37688 | None:intergenic | 40.0% | |
| GACTTCGATATCTTGGTTTC+AGG | + | tig0027132:37669-37688 | Msa1432620:intron | 40.0% | |
| ! | TTGGTTTCAGGTAAGTACGT+CGG | + | tig0027132:37681-37700 | Msa1432620:intron | 40.0% |
| TGATGCATTGGAGAAACAGA+AGG | + | tig0027132:37755-37774 | Msa1432620:CDS | 40.0% | |
| AGATGTGTAAACCTCTCGTT+AGG | + | tig0027132:38060-38079 | Msa1432620:three_prime_UTR | 40.0% | |
| TGGAACGAATCGTGAATCGA+TGG | - | tig0027132:33344-33363 | None:intergenic | 45.0% | |
| TGAGATGATGAGGATGAAGG+TGG | - | tig0027132:33382-33401 | None:intergenic | 45.0% | |
| GGTTGAGATGATGAGGATGA+AGG | - | tig0027132:33385-33404 | None:intergenic | 45.0% | |
| GAATTGGGGTTGAGATGATG+AGG | - | tig0027132:33392-33411 | None:intergenic | 45.0% | |
| TGTTGAAGGTGAAAGGGAAC+GGG | - | tig0027132:33439-33458 | None:intergenic | 45.0% | |
| TTCACATTCTCAAGAGCCTC+CGG | - | tig0027132:33716-33735 | None:intergenic | 45.0% | |
| CCAAGAAGAAAGCTGTTCCT+CGG | + | tig0027132:33777-33796 | Msa1432620:CDS | 45.0% | |
| AGGATCCTATTCTTGCAGAG+TGG | + | tig0027132:33822-33841 | Msa1432620:CDS | 45.0% | |
| TGTGAGAGGTAGTGTGTGTT+TGG | + | tig0027132:33941-33960 | Msa1432620:intron | 45.0% | |
| TTCCATATAGGCTCGTGGAA+GGG | - | tig0027132:34201-34220 | None:intergenic | 45.0% | |
| TTTCCATATAGGCTCGTGGA+AGG | - | tig0027132:34202-34221 | None:intergenic | 45.0% | |
| ! | TAGTGACTGGTTGCGATACT+TGG | + | tig0027132:34260-34279 | Msa1432620:intron | 45.0% |
| ! | AGTGACTGGTTGCGATACTT+GGG | + | tig0027132:34261-34280 | Msa1432620:intron | 45.0% |
| !! | GTTTGGATGGAGAGTTTTGG+TGG | - | tig0027132:34704-34723 | None:intergenic | 45.0% |
| ATGCACGATTCAATTGGCGA+TGG | + | tig0027132:34903-34922 | Msa1432620:intron | 45.0% | |
| !! | GATGATTATCGGCTCTTCTG+CGG | + | tig0027132:35054-35073 | Msa1432620:intron | 45.0% |
| GCGATTCCCTTCCTTTAACA+TGG | + | tig0027132:35125-35144 | Msa1432620:CDS | 45.0% | |
| GCTCATTGTTCACAAAGCAC+GGG | + | tig0027132:35380-35399 | Msa1432620:intron | 45.0% | |
| !!! | TCAGGTCGAGTTTCTGGTTT+TGG | + | tig0027132:35531-35550 | Msa1432620:intron | 45.0% |
| !!! | GGCAAAGGGGTTTTTAAGTG+TGG | + | tig0027132:35904-35923 | Msa1432620:intron | 45.0% |
| ACTTATCCCTCGTTATGGGT+GGG | - | tig0027132:35942-35961 | None:intergenic | 45.0% | |
| GTCTCACTTATCCCTCGTTA+TGG | - | tig0027132:35947-35966 | None:intergenic | 45.0% | |
| TTGAGTGTCCACCAGAGATA+AGG | + | tig0027132:35976-35995 | Msa1432620:intron | 45.0% | |
| TGAGTGTCCACCAGAGATAA+GGG | + | tig0027132:35977-35996 | Msa1432620:intron | 45.0% | |
| GCTAATCAGAGCCTTCATTC+TGG | + | tig0027132:36186-36205 | Msa1432620:intron | 45.0% | |
| ATAACGCACCCTCTTCTTTC+TGG | - | tig0027132:36321-36340 | None:intergenic | 45.0% | |
| CTCGTGTGACCAATCATCTA+TGG | - | tig0027132:37342-37361 | None:intergenic | 45.0% | |
| TTGGTCACACGAGACAAGAT+AGG | + | tig0027132:37349-37368 | Msa1432620:intron | 45.0% | |
| !! | GCTTTGGGTGTTGTTGTAGT+AGG | + | tig0027132:37607-37626 | Msa1432620:intron | 45.0% |
| GTACCCTGACTTCGATATCT+TGG | + | tig0027132:37662-37681 | Msa1432620:intron | 45.0% | |
| CAGGTAAGTACGTCGGAAAT+CGG | + | tig0027132:37688-37707 | Msa1432620:intron | 45.0% | |
| AACTACGCAAGAGTAAGTGG+AGG | + | tig0027132:37718-37737 | Msa1432620:CDS | 45.0% | |
| ACTACGCAAGAGTAAGTGGA+GGG | + | tig0027132:37719-37738 | Msa1432620:CDS | 45.0% | |
| TTGAGGCATAACCTAACGAG+AGG | - | tig0027132:38074-38093 | None:intergenic | 45.0% | |
| !!! | TAATTTATTTTAATGTATAT+TGG | + | tig0027132:33909-33928 | Msa1432620:intron | 5.0% |
| !! | GGTGGTGTCGTCATTGCAAT+TGG | - | tig0027132:33364-33383 | None:intergenic | 50.0% |
| AAAGGGAACGGGGAAGTAAG+GGG | - | tig0027132:33428-33447 | None:intergenic | 50.0% | |
| GAAAGGGAACGGGGAAGTAA+GGG | - | tig0027132:33429-33448 | None:intergenic | 50.0% | |
| TGAAAGGGAACGGGGAAGTA+AGG | - | tig0027132:33430-33449 | None:intergenic | 50.0% | |
| GTTGAAGGTGAAAGGGAACG+GGG | - | tig0027132:33438-33457 | None:intergenic | 50.0% | |
| ! | GCGGGTTGTTGAAGGTGAAA+GGG | - | tig0027132:33445-33464 | None:intergenic | 50.0% |
| ! | TGCGGGTTGTTGAAGGTGAA+AGG | - | tig0027132:33446-33465 | None:intergenic | 50.0% |
| TGCACAGATAATTACGCCGG+AGG | + | tig0027132:33697-33716 | Msa1432620:CDS | 50.0% | |
| GGAGGCTCTTGAGAATGTGA+AGG | + | tig0027132:33715-33734 | Msa1432620:CDS | 50.0% | |
| GGCTCTTGAGAATGTGAAGG+CGG | + | tig0027132:33718-33737 | Msa1432620:CDS | 50.0% | |
| CCGAGGAACAGCTTTCTTCT+TGG | - | tig0027132:33780-33799 | None:intergenic | 50.0% | |
| GAAAGCTGCAGGTCAAGCTT+GGG | + | tig0027132:33799-33818 | Msa1432620:CDS | 50.0% | |
| TCAGGCCACTCTGCAAGAAT+AGG | - | tig0027132:33830-33849 | None:intergenic | 50.0% | |
| ATTCTTGCAGAGTGGCCTGA+AGG | + | tig0027132:33830-33849 | Msa1432620:CDS | 50.0% | |
| TTCCCTTCCACGAGCCTATA+TGG | + | tig0027132:34196-34215 | Msa1432620:intron | 50.0% | |
| !! | GAGTTTTGGTGGGTAGAGGA+GGG | - | tig0027132:34693-34712 | None:intergenic | 50.0% |
| !! | AGAGTTTTGGTGGGTAGAGG+AGG | - | tig0027132:34694-34713 | None:intergenic | 50.0% |
| !! | TGGAGAGTTTTGGTGGGTAG+AGG | - | tig0027132:34697-34716 | None:intergenic | 50.0% |
| TTGGAGTCAGGTCGAGTTTC+TGG | + | tig0027132:35525-35544 | Msa1432620:intron | 50.0% | |
| CACTTATCCCTCGTTATGGG+TGG | - | tig0027132:35943-35962 | None:intergenic | 50.0% | |
| !! | GAAAGCACCCTTATCTCTGG+TGG | - | tig0027132:35987-36006 | None:intergenic | 50.0% |
| ! | GAGGGTGCGTTATTTGAGAG+TGG | + | tig0027132:36328-36347 | Msa1432620:intron | 50.0% |
| ! | TTCTAGGTGGTTTGGACGTG+TGG | + | tig0027132:37440-37459 | Msa1432620:intron | 50.0% |
| ! | AACGGGGAAGTAAGGGGCAT+TGG | - | tig0027132:33422-33441 | None:intergenic | 55.0% |
| ! | AGGTGGTTGCGGGTTGTTGA+AGG | - | tig0027132:33453-33472 | None:intergenic | 55.0% |
| CTCAACGTCGCTACTCGCAA+TGG | - | tig0027132:33744-33763 | None:intergenic | 55.0% | |
| GGAAAGCTGCAGGTCAAGCT+TGG | + | tig0027132:33798-33817 | Msa1432620:CDS | 55.0% | |
| GGTTGCGATACTTGGGAGCT+AGG | + | tig0027132:34268-34287 | Msa1432620:intron | 55.0% | |
| GCGATACTTGGGAGCTAGGA+AGG | + | tig0027132:34272-34291 | Msa1432620:intron | 55.0% | |
| !! | TTGGAGGGGAGCACTTTAGC+AGG | + | tig0027132:34529-34548 | Msa1432620:intron | 55.0% |
| GGCTCTTCTGCGGTGATCTT+GGG | + | tig0027132:35064-35083 | Msa1432620:CDS | 55.0% | |
| GCGTAGTGAGAGGTGGTTGC+GGG | - | tig0027132:33463-33482 | None:intergenic | 60.0% | |
| GGCGTAGTGAGAGGTGGTTG+CGG | - | tig0027132:33464-33483 | None:intergenic | 60.0% | |
| CTTCCTCCGCCGCCAATTGT+CGG | + | tig0027132:33514-33533 | Msa1432620:CDS | 60.0% | |
| TAAGCAGCAGGCGGTGGAAC+GGG | - | tig0027132:33541-33560 | None:intergenic | 60.0% | |
| GTAAGCAGCAGGCGGTGGAA+CGG | - | tig0027132:33542-33561 | None:intergenic | 60.0% | |
| GGAACGGAGTAAGCAGCAGG+CGG | - | tig0027132:33550-33569 | None:intergenic | 60.0% | |
| TGCGGAACGGAGTAAGCAGC+AGG | - | tig0027132:33553-33572 | None:intergenic | 60.0% | |
| GCTGTTCCTCGGAAAGCTGC+AGG | + | tig0027132:33788-33807 | Msa1432620:CDS | 60.0% | |
| GCTTGACCTGCAGCTTTCCG+AGG | - | tig0027132:33797-33816 | None:intergenic | 60.0% | |
| AGCTGCAGGTCAAGCTTGGG+AGG | + | tig0027132:33802-33821 | Msa1432620:CDS | 60.0% | |
| CGGCTCTTCTGCGGTGATCT+TGG | + | tig0027132:35063-35082 | Msa1432620:CDS | 60.0% | |
| AGCAGCAAGGTCAGCAGGGT+TGG | - | tig0027132:36818-36837 | None:intergenic | 60.0% | |
| GAGCAGCAGCAAGGTCAGCA+GGG | - | tig0027132:36822-36841 | None:intergenic | 60.0% | |
| AGAGCAGCAGCAAGGTCAGC+AGG | - | tig0027132:36823-36842 | None:intergenic | 60.0% | |
| GTAGGGTGCGGCGTAGTGAG+AGG | - | tig0027132:33473-33492 | None:intergenic | 65.0% | |
| GGAACGGGGCCGACAATTGG+CGG | - | tig0027132:33526-33545 | None:intergenic | 65.0% | |
| GGTGGAACGGGGCCGACAAT+TGG | - | tig0027132:33529-33548 | None:intergenic | 65.0% | |
| AAGCAGCAGGCGGTGGAACG+GGG | - | tig0027132:33540-33559 | None:intergenic | 65.0% | |
| ACGGAGTAAGCAGCAGGCGG+TGG | - | tig0027132:33547-33566 | None:intergenic | 65.0% | |
| GGGTGCGGCGTAGTGAGAGG+TGG | - | tig0027132:33470-33489 | None:intergenic | 70.0% | |
| TGGCGGCGGAGGAAGCTGCA+CGG | - | tig0027132:33509-33528 | None:intergenic | 70.0% | |
| ACGGGGCCGACAATTGGCGG+CGG | - | tig0027132:33523-33542 | None:intergenic | 70.0% | |
| GGGGGTGGCGACGTAGGGTG+CGG | - | tig0027132:33485-33504 | None:intergenic | 75.0% | |
| ACGGCGGGGGTGGCGACGTA+GGG | - | tig0027132:33490-33509 | None:intergenic | 75.0% | |
| AGGAAGCTGCACGGCGGGGG+TGG | - | tig0027132:33500-33519 | None:intergenic | 75.0% | |
| CGGAGGAAGCTGCACGGCGG+GGG | - | tig0027132:33503-33522 | None:intergenic | 75.0% | |
| GCGGAGGAAGCTGCACGGCG+GGG | - | tig0027132:33504-33523 | None:intergenic | 75.0% | |
| GGCGGAGGAAGCTGCACGGC+GGG | - | tig0027132:33505-33524 | None:intergenic | 75.0% | |
| CGGCGGAGGAAGCTGCACGG+CGG | - | tig0027132:33506-33525 | None:intergenic | 75.0% | |
| GGGCCGACAATTGGCGGCGG+AGG | - | tig0027132:33520-33539 | None:intergenic | 75.0% | |
| ! | CACGGCGGGGGTGGCGACGT+AGG | - | tig0027132:33491-33510 | None:intergenic | 80.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| tig0027132 | gene | 33210 | 38197 | 33210 | ID=Msa1432620;Name=Msa1432620 |
| tig0027132 | mRNA | 33210 | 38197 | 33210 | ID=Msa1432620-mRNA-1;Parent=Msa1432620;Name=Msa1432620-mRNA-1;_AED=0.16;_eAED=0.16;_QI=160|1|1|1|1|1|6|281|240 |
| tig0027132 | exon | 33210 | 33579 | 33210 | ID=Msa1432620-mRNA-1:exon:8199;Parent=Msa1432620-mRNA-1 |
| tig0027132 | exon | 33674 | 33851 | 33674 | ID=Msa1432620-mRNA-1:exon:8200;Parent=Msa1432620-mRNA-1 |
| tig0027132 | exon | 35055 | 35152 | 35055 | ID=Msa1432620-mRNA-1:exon:8201;Parent=Msa1432620-mRNA-1 |
| tig0027132 | exon | 36760 | 36856 | 36760 | ID=Msa1432620-mRNA-1:exon:8202;Parent=Msa1432620-mRNA-1 |
| tig0027132 | exon | 37691 | 37776 | 37691 | ID=Msa1432620-mRNA-1:exon:8203;Parent=Msa1432620-mRNA-1 |
| tig0027132 | exon | 37863 | 38197 | 37863 | ID=Msa1432620-mRNA-1:exon:8204;Parent=Msa1432620-mRNA-1 |
| tig0027132 | five_prime_UTR | 33210 | 33369 | 33210 | ID=Msa1432620-mRNA-1:five_prime_utr;Parent=Msa1432620-mRNA-1 |
| tig0027132 | CDS | 33370 | 33579 | 33370 | ID=Msa1432620-mRNA-1:cds;Parent=Msa1432620-mRNA-1 |
| tig0027132 | CDS | 33674 | 33851 | 33674 | ID=Msa1432620-mRNA-1:cds;Parent=Msa1432620-mRNA-1 |
| tig0027132 | CDS | 35055 | 35152 | 35055 | ID=Msa1432620-mRNA-1:cds;Parent=Msa1432620-mRNA-1 |
| tig0027132 | CDS | 36760 | 36856 | 36760 | ID=Msa1432620-mRNA-1:cds;Parent=Msa1432620-mRNA-1 |
| tig0027132 | CDS | 37691 | 37776 | 37691 | ID=Msa1432620-mRNA-1:cds;Parent=Msa1432620-mRNA-1 |
| tig0027132 | CDS | 37863 | 37916 | 37863 | ID=Msa1432620-mRNA-1:cds;Parent=Msa1432620-mRNA-1 |
| tig0027132 | three_prime_UTR | 37917 | 38197 | 37917 | ID=Msa1432620-mRNA-1:three_prime_utr;Parent=Msa1432620-mRNA-1 |
| Gene Sequence |
| Protein sequence |
