Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1432810 | XP_013463183.2 | 96.683 | 814 | 8 | 2 | 1 | 795 | 1 | 814 | 0.0 | 1623 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1432810 | sp|Q8RWZ3|IBR3_ARATH | 73.555 | 813 | 182 | 8 | 8 | 793 | 15 | 821 | 0.0 | 1223 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1432810 | A0A396J985 | 96.683 | 814 | 8 | 2 | 1 | 795 | 1 | 814 | 0.0 | 1623 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0107400 | Msa1432810 | 0.810396 | 1.176904e-50 | -8.615850e-47 |
| Msa1387240 | Msa1432810 | 0.807481 | 4.950339e-50 | -8.615850e-47 |
| Msa1422430 | Msa1432810 | 0.820199 | 7.782727e-53 | -8.615850e-47 |
| Msa0649100 | Msa1432810 | 0.812474 | 4.162537e-51 | -8.615850e-47 |
| Msa0153980 | Msa1432810 | 0.835796 | 1.361871e-56 | -8.615850e-47 |
| Msa0164910 | Msa1432810 | 0.826869 | 2.140587e-54 | -8.615850e-47 |
| Msa0189610 | Msa1432810 | 0.811893 | 5.575683e-51 | -8.615850e-47 |
| Msa1297530 | Msa1432810 | 0.803735 | 3.024911e-49 | -8.615850e-47 |
| Msa0411240 | Msa1432810 | 0.811045 | 8.519707e-51 | -8.615850e-47 |
| Msa0301170 | Msa1432810 | 0.944161 | 3.240248e-103 | -8.615850e-47 |
| Msa0304100 | Msa1432810 | 0.818070 | 2.374330e-52 | -8.615850e-47 |
| Msa0319290 | Msa1432810 | 0.801748 | 7.779338e-49 | -8.615850e-47 |
| Msa0320430 | Msa1432810 | 0.913579 | 5.227202e-84 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1432810 | MtrunA17_Chr2g0295521 | 96.683 | 814 | 8 | 2 | 1 | 795 | 1 | 814 | 0.0 | 1623 |
| Msa1432810 | MtrunA17_Chr4g0029681 | 26.736 | 288 | 199 | 6 | 500 | 785 | 134 | 411 | 4.09e-21 | 97.1 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1432810 | AT3G06810.1 | 73.555 | 813 | 182 | 8 | 8 | 793 | 15 | 821 | 0.0 | 1223 |
| Msa1432810 | AT3G45300.1 | 26.389 | 288 | 200 | 6 | 500 | 785 | 126 | 403 | 8.75e-18 | 87.0 |
Find 224 sgRNAs with CRISPR-Local
Find 497 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| AACAAACCATACTGGTAATT+TGG | 0.098346 | tig0027178:-36631 | None:intergenic |
| TCTCTGTTATAGATCAATTT+TGG | 0.156428 | tig0027178:+35623 | Msa1432810:five_prime_UTR |
| TATTGTTCTTCCAACGTTTC+TGG | 0.159631 | tig0027178:+35708 | Msa1432810:CDS |
| AATATGATAATTTATTTATT+TGG | 0.169619 | tig0027178:-35415 | None:intergenic |
| TGCAATGATCCAACTGTTAT+TGG | 0.185537 | tig0027178:+36558 | Msa1432810:CDS |
| TGCTGTTGAAAGAGAGTTTC+AGG | 0.187974 | tig0027178:+35998 | Msa1432810:CDS |
| AGTTCATGGGTCATTCTCTT+TGG | 0.203296 | tig0027178:+40323 | Msa1432810:CDS |
| TTATTTGGTCTTTGCCATTT+TGG | 0.239660 | tig0027178:-35400 | None:intergenic |
| GCTCTTAGTAGAAAAGCTTT+TGG | 0.266733 | tig0027178:+42390 | Msa1432810:CDS |
| GGAGATTCATATATTATAAA+TGG | 0.268356 | tig0027178:+41124 | Msa1432810:CDS |
| GGTCTAACAAATCTCGAATA+TGG | 0.272585 | tig0027178:+40289 | Msa1432810:CDS |
| TTGTCAAGAAATATGTTCTT+AGG | 0.273150 | tig0027178:+35940 | Msa1432810:CDS |
| GGAGCAAACCTTCCCTCATT+TGG | 0.284918 | tig0027178:-38955 | None:intergenic |
| ATACAGTGGTGCAGCCTTCC+AGG | 0.288590 | tig0027178:-42318 | None:intergenic |
| TTGCACAAACAGAAAACTTT+AGG | 0.290895 | tig0027178:-36540 | None:intergenic |
| CAGTGTTATGTTAAAGATAT+TGG | 0.292618 | tig0027178:+38062 | Msa1432810:intron |
| TTTGATGGAACACTCAATAT+TGG | 0.293143 | tig0027178:-40615 | None:intergenic |
| TGGCTCATTTGTTTCAGATT+TGG | 0.305296 | tig0027178:+42431 | Msa1432810:CDS |
| CTGCTGCAGGATCGAGTAAT+TGG | 0.307229 | tig0027178:+37747 | Msa1432810:intron |
| GTTCATGGGTCATTCTCTTT+GGG | 0.314341 | tig0027178:+40324 | Msa1432810:CDS |
| AAGAAGGCCTGTGGAACTTA+TGG | 0.315111 | tig0027178:+39130 | Msa1432810:CDS |
| AAATACCCCATAATATAAAA+TGG | 0.316567 | tig0027178:-36585 | None:intergenic |
| GCCTGCCACAAATATCTTAA+TGG | 0.322584 | tig0027178:+41458 | Msa1432810:CDS |
| AAATGTTTGCTTTGATTGAT+TGG | 0.326074 | tig0027178:+37372 | Msa1432810:CDS |
| AAGAGACCTTTGACGGTGTT+TGG | 0.327890 | tig0027178:+41381 | Msa1432810:CDS |
| CTTCCTCAGCATCCTCCTTC+AGG | 0.334960 | tig0027178:+38789 | Msa1432810:CDS |
| TTGAAATGAGTTGGAGAGAG+AGG | 0.334992 | tig0027178:-35735 | None:intergenic |
| TTTGATGCCAGGGAAGAAAA+TGG | 0.339745 | tig0027178:+38249 | Msa1432810:intron |
| TTCTATTTGTTCTCAAAGCT+TGG | 0.349250 | tig0027178:-42925 | None:intergenic |
| ACAAACCATACTGGTAATTT+GGG | 0.349481 | tig0027178:-36630 | None:intergenic |
| CCCACTAATAAAGTGTTCTA+AGG | 0.354056 | tig0027178:+42986 | Msa1432810:three_prime_UTR |
| ATCTAATCCAACATACTTGA+TGG | 0.358938 | tig0027178:+35896 | Msa1432810:CDS |
| ATCCCTTCTGAAGATTCTTC+AGG | 0.367408 | tig0027178:+37407 | Msa1432810:CDS |
| TCCATCGGTCTGGGAAATTA+CGG | 0.368840 | tig0027178:+36985 | Msa1432810:CDS |
| CTTTGCTTGAGGGGAAGATT+AGG | 0.370862 | tig0027178:+40546 | Msa1432810:CDS |
| TCCTACAATCACGACCAAAA+TGG | 0.377339 | tig0027178:+35386 | Msa1432810:five_prime_UTR |
| GAGCAAACCTTCCCTCATTT+GGG | 0.379348 | tig0027178:-38954 | None:intergenic |
| GATTCAAATGACTTGTTGTT+GGG | 0.380148 | tig0027178:+40262 | Msa1432810:CDS |
| AAGAAGAAGAAGATAGAGTT+GGG | 0.382693 | tig0027178:-35557 | None:intergenic |
| TGGATACCTTTGTGAGTTCA+TGG | 0.386228 | tig0027178:+40309 | Msa1432810:CDS |
| GAATAAAATAATTAAGTTCA+TGG | 0.390411 | tig0027178:+39002 | Msa1432810:CDS |
| TTGATGGAAGTTGGTTCAAA+TGG | 0.391634 | tig0027178:+35912 | Msa1432810:CDS |
| GCAAAGAAAATTCTGTTTGA+TGG | 0.394048 | tig0027178:+40217 | Msa1432810:CDS |
| AGAGTAGGAGCGCAATTTAT+CGG | 0.402948 | tig0027178:+36917 | Msa1432810:intron |
| TTGCATTTGCAGGCTAGGTT+AGG | 0.405544 | tig0027178:+42294 | Msa1432810:intron |
| ATATTATAAATGGAACAAAA+TGG | 0.406958 | tig0027178:+41134 | Msa1432810:CDS |
| AAACAGAAAACTTTAGGAAC+TGG | 0.415958 | tig0027178:-36534 | None:intergenic |
| TAATGTGGATTCCATCGGTC+TGG | 0.419244 | tig0027178:+36975 | Msa1432810:CDS |
| CAAGAAGGTATGGAACGTTC+TGG | 0.422589 | tig0027178:+38098 | Msa1432810:CDS |
| CGAGCGAGGCATGCAACTAA+TGG | 0.422857 | tig0027178:+42359 | Msa1432810:CDS |
| ACCTCCATGTTACCTGTGTC+AGG | 0.423889 | tig0027178:-40373 | None:intergenic |
| CACCACTGTATGAGACTAAT+AGG | 0.424060 | tig0027178:+42330 | Msa1432810:CDS |
| TTCAGGAGCAACAGCAGGCT+TGG | 0.424584 | tig0027178:+37424 | Msa1432810:CDS |
| CAGTCCAACGTGCTTCTGAT+TGG | 0.429428 | tig0027178:-39068 | None:intergenic |
| TGATTCAAATGACTTGTTGT+TGG | 0.430057 | tig0027178:+40261 | Msa1432810:CDS |
| ACAACAATCAATGATCTTAG+TGG | 0.430286 | tig0027178:+41332 | Msa1432810:CDS |
| TATATGCAACATCACACATT+TGG | 0.430300 | tig0027178:-37803 | None:intergenic |
| CTTGAGGGGAAGATTAGGTC+TGG | 0.430876 | tig0027178:+40551 | Msa1432810:CDS |
| TTCTAATTCTAACTTGCCTA+TGG | 0.431568 | tig0027178:-42892 | None:intergenic |
| GTACCCAAGTGGACTTCGTC+CGG | 0.432695 | tig0027178:-42870 | None:intergenic |
| CCATCGGTCTGGGAAATTAC+GGG | 0.432973 | tig0027178:+36986 | Msa1432810:CDS |
| ATATCTTTGTAATCATCATC+GGG | 0.434775 | tig0027178:+35484 | Msa1432810:five_prime_UTR |
| GCAACAGCAGGCTTGGTTCA+TGG | 0.436348 | tig0027178:+37431 | Msa1432810:CDS |
| TCCTTAGAACACTTTATTAG+TGG | 0.437054 | tig0027178:-42987 | None:intergenic |
| TTTATAAAACTCCTCTTCCA+TGG | 0.440772 | tig0027178:-39040 | None:intergenic |
| AGTATAAGAATTCTGCATCT+TGG | 0.441984 | tig0027178:-41178 | None:intergenic |
| TAGAACTTCCATTCAGCAAC+AGG | 0.442596 | tig0027178:-38272 | None:intergenic |
| GCTAGAGAAGACTAGGTTGC+TGG | 0.444153 | tig0027178:+42555 | Msa1432810:CDS |
| GAAGAAGAAGAAGATAGAGT+TGG | 0.447217 | tig0027178:-35558 | None:intergenic |
| GAGTAATTGGCATACTTGAC+TGG | 0.449570 | tig0027178:+37760 | Msa1432810:CDS |
| CCAACATACTTGATGGAAGT+TGG | 0.451755 | tig0027178:+35903 | Msa1432810:CDS |
| GGCTTTGATGATGCGCCTCA+TGG | 0.454474 | tig0027178:+41402 | Msa1432810:CDS |
| CTCATCTGTGGGCAGCTGCT+AGG | 0.454573 | tig0027178:+42826 | Msa1432810:CDS |
| CTTCAATTTACAGGTTCTCC+AGG | 0.456137 | tig0027178:+36488 | Msa1432810:intron |
| AGTCCAACGTGCTTCTGATT+GGG | 0.457612 | tig0027178:-39067 | None:intergenic |
| ATAAAGAACAAATGCTAGAA+TGG | 0.458095 | tig0027178:+40516 | Msa1432810:CDS |
| GCACCACAATTAAATATTTG+TGG | 0.460171 | tig0027178:-40349 | None:intergenic |
| TTCACCCATTAAGATATTTG+TGG | 0.461523 | tig0027178:-41463 | None:intergenic |
| CACTGTCCTGGCTCATCTGT+GGG | 0.464840 | tig0027178:+42815 | Msa1432810:CDS |
| GAAGACTAGGTTGCTGGTGT+TGG | 0.467649 | tig0027178:+42561 | Msa1432810:CDS |
| TGGCTTATTCCTTTGCTTGA+GGG | 0.472384 | tig0027178:+40536 | Msa1432810:CDS |
| CCTTAGAACACTTTATTAGT+GGG | 0.475679 | tig0027178:-42986 | None:intergenic |
| ACCAAATAAAAGCTCATGAA+AGG | 0.475898 | tig0027178:+42952 | Msa1432810:three_prime_UTR |
| TGAAATGAGTTGGAGAGAGA+GGG | 0.475918 | tig0027178:-35734 | None:intergenic |
| AAGGTTTGCTCCTAGTCAAA+AGG | 0.476231 | tig0027178:+38966 | Msa1432810:CDS |
| AAAGCCTGCTGGGAAATTGT+TGG | 0.476906 | tig0027178:+35965 | Msa1432810:CDS |
| TATATTATGGGGTATTTGGA+AGG | 0.477908 | tig0027178:+36591 | Msa1432810:CDS |
| TGGTCTCATCGAAGCTGCTT+GGG | 0.478454 | tig0027178:+38743 | Msa1432810:CDS |
| CGAGGCGCTTCAATTTATGC+TGG | 0.479069 | tig0027178:+38314 | Msa1432810:CDS |
| GAGTAGGAGCGCAATTTATC+GGG | 0.479674 | tig0027178:+36918 | Msa1432810:intron |
| AAGATATGTTTGTGTCTGTC+TGG | 0.480589 | tig0027178:-35468 | None:intergenic |
| TTACAGGTTCTCCAGGCTCT+AGG | 0.480647 | tig0027178:+36495 | Msa1432810:intron |
| ATGGTCTCATCGAAGCTGCT+TGG | 0.480972 | tig0027178:+38742 | Msa1432810:CDS |
| AGCTGCTCCATGCACTTGAA+TGG | 0.481994 | tig0027178:-42778 | None:intergenic |
| CGGCCCGGACGAAGTCCACT+TGG | 0.482405 | tig0027178:+42866 | Msa1432810:CDS |
| TGGTATTATTGCCTAGAGCC+TGG | 0.483040 | tig0027178:-36506 | None:intergenic |
| ATTCAAGTGCATGGAGCAGC+TGG | 0.485086 | tig0027178:+42780 | Msa1432810:CDS |
| CCTGCCACAAATATCTTAAT+GGG | 0.485118 | tig0027178:+41459 | Msa1432810:CDS |
| CAAAGAAAATTCTGTTTGAT+GGG | 0.486008 | tig0027178:+40218 | Msa1432810:CDS |
| TACACAGAAGTACTTGCTAA+TGG | 0.487331 | tig0027178:+38723 | Msa1432810:CDS |
| CCCATTAAGATATTTGTGGC+AGG | 0.490072 | tig0027178:-41459 | None:intergenic |
| CCAACTTCCATCAAGTATGT+TGG | 0.490664 | tig0027178:-35903 | None:intergenic |
| CATTAGTTGCATGCCTCGCT+CGG | 0.492548 | tig0027178:-42358 | None:intergenic |
| TTGCAGGCTAGGTTAGGTCC+TGG | 0.494387 | tig0027178:+42300 | Msa1432810:intron |
| GGCTTATTCCTTTGCTTGAG+GGG | 0.499531 | tig0027178:+40537 | Msa1432810:CDS |
| CATATCTTTGTAATCATCAT+CGG | 0.500714 | tig0027178:+35483 | Msa1432810:five_prime_UTR |
| AATGTGGATTCCATCGGTCT+GGG | 0.505364 | tig0027178:+36976 | Msa1432810:CDS |
| AGAAGAAGATAGAGTTGGGG+GGG | 0.505646 | tig0027178:-35553 | None:intergenic |
| TGTATCATCTGACACTGTCC+TGG | 0.505713 | tig0027178:+42803 | Msa1432810:CDS |
| ATTGAGAATCGCAGACGGCC+CGG | 0.509349 | tig0027178:+42851 | Msa1432810:CDS |
| AACTTTAGGAACTGGAACAT+TGG | 0.509463 | tig0027178:-36526 | None:intergenic |
| TTATAAAACTCCTCTTCCAT+GGG | 0.509848 | tig0027178:-39039 | None:intergenic |
| TTCATTACATTCTGCTAATG+TGG | 0.509912 | tig0027178:+36960 | Msa1432810:CDS |
| TGGGAGAGATTGAAATGAGT+TGG | 0.509941 | tig0027178:-35744 | None:intergenic |
| TAGTCTTCTCTAGCTCGATT+CGG | 0.512035 | tig0027178:-42546 | None:intergenic |
| GACTGGGAACTATCTACCCT+TGG | 0.512383 | tig0027178:+37777 | Msa1432810:CDS |
| AGCAGAATGTAATGAAGCTA+AGG | 0.514604 | tig0027178:-36953 | None:intergenic |
| GGGAAAATGATTGCTCAGCA+TGG | 0.516122 | tig0027178:+42411 | Msa1432810:CDS |
| GCATCAGAAGATGCAATTTG+CGG | 0.517746 | tig0027178:-40590 | None:intergenic |
| TGGTTGAAATGGTGAGAGTC+AGG | 0.518209 | tig0027178:-35669 | None:intergenic |
| GATTCTTCAGGAGCAACAGC+AGG | 0.518250 | tig0027178:+37419 | Msa1432810:CDS |
| CAAATGAATCTTACCTCTGT+GGG | 0.518444 | tig0027178:-37485 | None:intergenic |
| GAGAGGGAAGCCAGAAACGT+TGG | 0.518459 | tig0027178:-35718 | None:intergenic |
| ACACTGTCCTGGCTCATCTG+TGG | 0.519285 | tig0027178:+42814 | Msa1432810:CDS |
| TATTGATTATTGCAAAAGAC+AGG | 0.520214 | tig0027178:+37014 | Msa1432810:CDS |
| TCACATAAAGAGACCTTTGA+CGG | 0.521909 | tig0027178:+41374 | Msa1432810:CDS |
| GAAGCCAACAATTTCCCAGC+AGG | 0.522814 | tig0027178:-35969 | None:intergenic |
| AAAGAGCGTACAAGAAGGTA+TGG | 0.523231 | tig0027178:+38088 | Msa1432810:CDS |
| CCAAATAAAAGCTCATGAAA+GGG | 0.524907 | tig0027178:+42953 | Msa1432810:three_prime_UTR |
| ATATTGAGTGTTCCATCAAA+AGG | 0.525028 | tig0027178:+40618 | Msa1432810:CDS |
| GGAGAGAGTCATGGTTGAAA+TGG | 0.525974 | tig0027178:-35680 | None:intergenic |
| ATGGCTTATTCCTTTGCTTG+AGG | 0.526145 | tig0027178:+40535 | Msa1432810:CDS |
| AACTCATTTCAATCTCTCCC+AGG | 0.527848 | tig0027178:+35746 | Msa1432810:CDS |
| GCGGACCAGCTTGATCGGTA+TGG | 0.531048 | tig0027178:+42589 | Msa1432810:CDS |
| ATCTTAATGGGTGAAGGACG+TGG | 0.532330 | tig0027178:+41471 | Msa1432810:CDS |
| ATGCAGAATTCTTATACTCA+TGG | 0.544050 | tig0027178:+41183 | Msa1432810:CDS |
| GCTTTGATGATGCGCCTCAT+GGG | 0.546380 | tig0027178:+41403 | Msa1432810:CDS |
| TCAAAGCCAAACACCGTCAA+AGG | 0.546540 | tig0027178:-41387 | None:intergenic |
| AAGGAGTTGGCAAAGAAAGA+AGG | 0.546612 | tig0027178:+39114 | Msa1432810:CDS |
| TGATGTTGCATATATCTGTA+TGG | 0.546840 | tig0027178:+37812 | Msa1432810:CDS |
| AAGAACATATTTCTTGACAA+TGG | 0.547602 | tig0027178:-35937 | None:intergenic |
| AGGTTTACCCTCACTTGTTG+AGG | 0.547991 | tig0027178:-37336 | None:intergenic |
| ACAAATATCTTAATGGGTGA+AGG | 0.550800 | tig0027178:+41465 | Msa1432810:CDS |
| TTATGGGGTATTTGGAAGGA+CGG | 0.550904 | tig0027178:+36595 | Msa1432810:CDS |
| AATGGTGTTCCAATAACAGT+TGG | 0.555057 | tig0027178:-36567 | None:intergenic |
| TGCACCTGACACAGGTAACA+TGG | 0.556008 | tig0027178:+40369 | Msa1432810:CDS |
| GGATACCTTTGTGAGTTCAT+GGG | 0.560667 | tig0027178:+40310 | Msa1432810:CDS |
| AGGGATAATTGCAATGGCTA+AGG | 0.561079 | tig0027178:+42627 | Msa1432810:CDS |
| CAGGAATCCATAAGTTCCAC+AGG | 0.561699 | tig0027178:-39137 | None:intergenic |
| TGTTTCCATACCGATCAAGC+TGG | 0.562002 | tig0027178:-42594 | None:intergenic |
| GAAAATGGCCTGTTGCTGAA+TGG | 0.562642 | tig0027178:+38264 | Msa1432810:CDS |
| TACCCAAGTGGACTTCGTCC+GGG | 0.563610 | tig0027178:-42869 | None:intergenic |
| AGTGCAGGACCTCCCAAATG+AGG | 0.563664 | tig0027178:+38942 | Msa1432810:CDS |
| ATGGTGGACTAGTGGTGCTA+TGG | 0.566565 | tig0027178:+41153 | Msa1432810:CDS |
| TTCAAATGACTTGTTGTTGG+GGG | 0.566857 | tig0027178:+40264 | Msa1432810:CDS |
| GTTGCTGGTGTTGGAAGCCG+CGG | 0.567966 | tig0027178:+42570 | Msa1432810:CDS |
| ATTCAAATGACTTGTTGTTG+GGG | 0.568686 | tig0027178:+40263 | Msa1432810:CDS |
| CATCACACATTTGGTTACCA+AGG | 0.569073 | tig0027178:-37794 | None:intergenic |
| CTTAGAACACTTTATTAGTG+GGG | 0.569881 | tig0027178:-42985 | None:intergenic |
| CCCGTAATTTCCCAGACCGA+TGG | 0.570449 | tig0027178:-36986 | None:intergenic |
| CAGCATAAATTGAAGCGCCT+CGG | 0.570907 | tig0027178:-38313 | None:intergenic |
| AAGCCGCGGACCAGCTTGAT+CGG | 0.571761 | tig0027178:+42584 | Msa1432810:CDS |
| CGTTGGAAGAACAATAATTG+AGG | 0.574358 | tig0027178:-35701 | None:intergenic |
| GAAGTCCACTTGGGTACCAT+AGG | 0.576126 | tig0027178:+42876 | Msa1432810:CDS |
| ACACATATACCCCATGGAAG+AGG | 0.576431 | tig0027178:+39029 | Msa1432810:CDS |
| GAAGAAGAAGATAGAGTTGG+GGG | 0.576685 | tig0027178:-35555 | None:intergenic |
| ATTTGTTTCAGATTTGGCCA+AGG | 0.577448 | tig0027178:+42437 | Msa1432810:CDS |
| GGAACGTTCTGGATTACCAC+AGG | 0.577705 | tig0027178:+38109 | Msa1432810:CDS |
| CTAATCTTCCCCTCAAGCAA+AGG | 0.578251 | tig0027178:-40545 | None:intergenic |
| CTAATAGGCGCTGCCGAGCG+AGG | 0.578942 | tig0027178:+42345 | Msa1432810:CDS |
| GCTCCTGAAGAATCTTCAGA+AGG | 0.581121 | tig0027178:-37410 | None:intergenic |
| TGAATCTTACCTCTGTGGGA+TGG | 0.582125 | tig0027178:-37481 | None:intergenic |
| GACATGGCCATTCAAGTGCA+TGG | 0.585587 | tig0027178:+42771 | Msa1432810:CDS |
| CAGCTGCCCACAGATGAGCC+AGG | 0.586680 | tig0027178:-42821 | None:intergenic |
| AGGCTAGGTTAGGTCCTGGA+AGG | 0.589143 | tig0027178:+42304 | Msa1432810:intron |
| ATCACACATTTGGTTACCAA+GGG | 0.589581 | tig0027178:-37793 | None:intergenic |
| GCAGGTTGATAGTGCTGCGA+GGG | 0.590311 | tig0027178:+40195 | Msa1432810:intron |
| GCTCCACAAATATTTAATTG+TGG | 0.591755 | tig0027178:+40346 | Msa1432810:CDS |
| GAATCGAGCTAGAGAAGACT+AGG | 0.591766 | tig0027178:+42548 | Msa1432810:CDS |
| AAGAAGAAGATAGAGTTGGG+GGG | 0.592703 | tig0027178:-35554 | None:intergenic |
| AATTGTGGTGCACCTGACAC+AGG | 0.595605 | tig0027178:+40361 | Msa1432810:CDS |
| CGCCTATTAGTCTCATACAG+TGG | 0.598100 | tig0027178:-42332 | None:intergenic |
| ATATGTCTCCTCAACAAGTG+AGG | 0.598130 | tig0027178:+37328 | Msa1432810:CDS |
| CTACCTGAAGGAGGATGCTG+AGG | 0.598252 | tig0027178:-38792 | None:intergenic |
| AGAAGAAGAAGATAGAGTTG+GGG | 0.599540 | tig0027178:-35556 | None:intergenic |
| ATTGTTATATAGTTTGGACA+TGG | 0.603937 | tig0027178:+35870 | Msa1432810:intron |
| AGCTCGAGGGATAATTGCAA+TGG | 0.605648 | tig0027178:+42621 | Msa1432810:CDS |
| CCAAATGAATCTTACCTCTG+TGG | 0.608608 | tig0027178:-37486 | None:intergenic |
| AAATGCAAAAGAATTAGTGC+AGG | 0.608717 | tig0027178:+38927 | Msa1432810:CDS |
| GTGCAGGACCTCCCAAATGA+GGG | 0.609469 | tig0027178:+38943 | Msa1432810:CDS |
| TCTGCTAATGTGGATTCCAT+CGG | 0.611029 | tig0027178:+36970 | Msa1432810:CDS |
| TATGTCTCCTCAACAAGTGA+GGG | 0.612390 | tig0027178:+37329 | Msa1432810:CDS |
| AGTAATTGGCATACTTGACT+GGG | 0.621463 | tig0027178:+37761 | Msa1432810:CDS |
| TTATAAATGGAACAAAATGG+TGG | 0.623779 | tig0027178:+41137 | Msa1432810:CDS |
| GGTCTCTTTATGTGAACACC+AGG | 0.624753 | tig0027178:-41366 | None:intergenic |
| CTCCTGAAGAATCTTCAGAA+GGG | 0.625254 | tig0027178:-37409 | None:intergenic |
| ACTACTTCTGCATGCCCATG+AGG | 0.626044 | tig0027178:-41417 | None:intergenic |
| GGCGAAAAGAGCGTACAAGA+AGG | 0.635332 | tig0027178:+38083 | Msa1432810:CDS |
| TTAGTGGATACTCAGACACC+TGG | 0.636037 | tig0027178:+41348 | Msa1432810:CDS |
| ATACCGATCAAGCTGGTCCG+CGG | 0.638981 | tig0027178:-42587 | None:intergenic |
| GGCCCGGACGAAGTCCACTT+GGG | 0.641188 | tig0027178:+42867 | Msa1432810:CDS |
| CAAACCTTCCCTCATTTGGG+AGG | 0.644225 | tig0027178:-38951 | None:intergenic |
| GGGATTGATGGTACTTGACA+TGG | 0.644700 | tig0027178:+42755 | Msa1432810:CDS |
| AATAATTGAGGAGAGAGTCA+TGG | 0.646534 | tig0027178:-35689 | None:intergenic |
| GGAACAAAATGGTGGACTAG+TGG | 0.652728 | tig0027178:+41145 | Msa1432810:CDS |
| TTGGTATAGCTACCTGAAGG+AGG | 0.653502 | tig0027178:-38801 | None:intergenic |
| GGAGGAACACATATACCCCA+TGG | 0.653714 | tig0027178:+39023 | Msa1432810:CDS |
| TTTCCCAATCAGAAGCACGT+TGG | 0.660462 | tig0027178:+39064 | Msa1432810:CDS |
| TGGCAAAGAAAGAAGGCCTG+TGG | 0.662344 | tig0027178:+39121 | Msa1432810:CDS |
| AGGACCTCCCAAATGAGGGA+AGG | 0.664334 | tig0027178:+38947 | Msa1432810:CDS |
| TTGGACTGTTCACCCAGCAG+AGG | 0.664856 | tig0027178:+39083 | Msa1432810:CDS |
| AATTAAACGAGTGACACACC+AGG | 0.668143 | tig0027178:-43117 | None:intergenic |
| TAAAATAATTAAGTTCATGG+AGG | 0.687419 | tig0027178:+39005 | Msa1432810:CDS |
| AATGACCCATGAACTCACAA+AGG | 0.692236 | tig0027178:-40315 | None:intergenic |
| TGCAGGTTGATAGTGCTGCG+AGG | 0.692729 | tig0027178:+40194 | Msa1432810:intron |
| AAACTGACTTCAATGCAGCA+AGG | 0.693431 | tig0027178:+41304 | Msa1432810:CDS |
| TATAAAACTCCTCTTCCATG+GGG | 0.694997 | tig0027178:-39038 | None:intergenic |
| ACTTGCCTATGGTACCCAAG+TGG | 0.703994 | tig0027178:-42881 | None:intergenic |
| AGGACATTGAGAATCGCAGA+CGG | 0.708119 | tig0027178:+42846 | Msa1432810:CDS |
| GAACGTTCTGGATTACCACA+GGG | 0.724857 | tig0027178:+38110 | Msa1432810:CDS |
| TATCTTTGTAATCATCATCG+GGG | 0.732389 | tig0027178:+35485 | Msa1432810:five_prime_UTR |
| GGTAGAGAAGGAATTCCCTG+TGG | 0.751716 | tig0027178:-38125 | None:intergenic |
| TCTTGTGTTCCATCCCACAG+AGG | 0.767466 | tig0027178:+37472 | Msa1432810:CDS |
| ACCTGACACAGGTAACATGG+AGG | 0.788587 | tig0027178:+40372 | Msa1432810:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | TCAATTAGATATATTTTATT+AGG | + | tig0027178:37103-37122 | Msa1432810:intron | 10.0% |
| !!! | GTTATTATATATTTTCAATT+TGG | + | tig0027178:38188-38207 | Msa1432810:intron | 10.0% |
| !! | CATATAATTAATAATATGTT+TGG | - | tig0027178:38650-38669 | None:intergenic | 10.0% |
| !! | AACATATTATTAATTATATG+CGG | + | tig0027178:38650-38669 | Msa1432810:intron | 10.0% |
| !! | AAAAAAATAAAATAATAGTG+TGG | - | tig0027178:39355-39374 | None:intergenic | 10.0% |
| !!! | ACACTATTATTTTATTTTTT+TGG | + | tig0027178:39354-39373 | Msa1432810:intron | 10.0% |
| !!! | TTTTGAATTGTTATATAGTT+TGG | + | tig0027178:35864-35883 | Msa1432810:intron | 15.0% |
| !! | TTTGGATAAACAAAATTAAT+TGG | + | tig0027178:36148-36167 | Msa1432810:intron | 15.0% |
| !!! | TAGATATATTTTATTAGGAT+AGG | + | tig0027178:37108-37127 | Msa1432810:intron | 15.0% |
| !!! | AGATATATTTTATTAGGATA+GGG | + | tig0027178:37109-37128 | Msa1432810:intron | 15.0% |
| !!! | CTTTATTTTATCTTTTGTTA+TGG | - | tig0027178:38471-38490 | None:intergenic | 15.0% |
| !! | GAATAAAATAATTAAGTTCA+TGG | + | tig0027178:39002-39021 | Msa1432810:CDS | 15.0% |
| !!! | TAATCTAAACTTTAACTTAT+AGG | + | tig0027178:40000-40019 | Msa1432810:intron | 15.0% |
| !! | ATTTAGATGGAATAAAATAT+AGG | + | tig0027178:40040-40059 | Msa1432810:intron | 15.0% |
| !! | ATATTATAAATGGAACAAAA+TGG | + | tig0027178:41134-41153 | Msa1432810:CDS | 15.0% |
| !! | AAATTTAAACCTACAAAATT+TGG | - | tig0027178:41586-41605 | None:intergenic | 15.0% |
| !!! | AATCTTGTTTATACTAATAT+TGG | + | tig0027178:41744-41763 | Msa1432810:intron | 15.0% |
| !! | TAAGTAAACAAAATATAATC+AGG | + | tig0027178:41956-41975 | Msa1432810:intron | 15.0% |
| !!! | AAGATGAAAAATATGATTTT+TGG | - | tig0027178:42266-42285 | None:intergenic | 15.0% |
| !!! | GAGTTTTTTTAATCAAAATA+AGG | + | tig0027178:43078-43097 | Msa1432810:three_prime_UTR | 15.0% |
| !! | AAATATGAGAGAAAAAAAAA+AGG | + | tig0027178:43159-43178 | Msa1432810:three_prime_UTR | 15.0% |
| !!! | TTATAGATCAATTTTGGATT+TGG | + | tig0027178:35629-35648 | Msa1432810:five_prime_UTR | 20.0% |
| !! | ATGCAAAAATGAATGAAAAA+TGG | - | tig0027178:35774-35793 | None:intergenic | 20.0% |
| !! | TATTTACTCATAATCTCTTA+TGG | + | tig0027178:36027-36046 | Msa1432810:intron | 20.0% |
| !!! | TAAGCTATTTCTATAACAAA+AGG | + | tig0027178:36216-36235 | Msa1432810:intron | 20.0% |
| !! | AAATACCCCATAATATAAAA+TGG | - | tig0027178:36588-36607 | None:intergenic | 20.0% |
| !!! | ATTTTATATTATGGGGTATT+TGG | + | tig0027178:36587-36606 | Msa1432810:CDS | 20.0% |
| !!! | ATTTATTTTAGATTGAGAGA+TGG | + | tig0027178:37297-37316 | Msa1432810:intron | 20.0% |
| !!! | TTTATTTTAGATTGAGAGAT+GGG | + | tig0027178:37298-37317 | Msa1432810:intron | 20.0% |
| !! | TAATATCAGAACAAAGAAAA+AGG | - | tig0027178:37558-37577 | None:intergenic | 20.0% |
| !!! | TGTATATATGATTCTGTTTT+AGG | - | tig0027178:37987-38006 | None:intergenic | 20.0% |
| !! | AAAAAAAACATGAATTACAC+TGG | - | tig0027178:38033-38052 | None:intergenic | 20.0% |
| !!! | ATTTTTACTTTCAACAAATC+AGG | + | tig0027178:38901-38920 | Msa1432810:intron | 20.0% |
| !! | TAAAATAATTAAGTTCATGG+AGG | + | tig0027178:39005-39024 | Msa1432810:CDS | 20.0% |
| !! | TGTAATATTTCAAAAACAGA+TGG | - | tig0027178:39237-39256 | None:intergenic | 20.0% |
| !!! | ATGCCTATTGTTAAATATTT+TGG | - | tig0027178:39267-39286 | None:intergenic | 20.0% |
| !! | TGAAACAACATTAGTATTTA+TGG | + | tig0027178:39543-39562 | Msa1432810:intron | 20.0% |
| !! | GAAACAACATTAGTATTTAT+GGG | + | tig0027178:39544-39563 | Msa1432810:intron | 20.0% |
| !! | TTGTTTCACATTATTATAAG+TGG | - | tig0027178:40107-40126 | None:intergenic | 20.0% |
| !! | TCAAATGATTCAATTAATAC+TGG | - | tig0027178:40707-40726 | None:intergenic | 20.0% |
| !! | GGAGATTCATATATTATAAA+TGG | + | tig0027178:41124-41143 | Msa1432810:CDS | 20.0% |
| !! | TTATACTCATGGTAAATATT+TGG | + | tig0027178:41194-41213 | Msa1432810:intron | 20.0% |
| !!! | TTTCGTTTACTTTAAGAATT+AGG | + | tig0027178:41525-41544 | Msa1432810:intron | 20.0% |
| !!! | AGTATTTTAGTAATAGAGAT+AGG | + | tig0027178:41628-41647 | Msa1432810:intron | 20.0% |
| !! | GATATAAACTTTCAATCAAA+CGG | - | tig0027178:41909-41928 | None:intergenic | 20.0% |
| ! | CATATCTTTGTAATCATCAT+CGG | + | tig0027178:35483-35502 | Msa1432810:five_prime_UTR | 25.0% |
| ! | ATATCTTTGTAATCATCATC+GGG | + | tig0027178:35484-35503 | Msa1432810:five_prime_UTR | 25.0% |
| !! | TCTCTGTTATAGATCAATTT+TGG | + | tig0027178:35623-35642 | Msa1432810:five_prime_UTR | 25.0% |
| !! | ATCAATTTTGGATTTGGATA+TGG | + | tig0027178:35635-35654 | Msa1432810:exon | 25.0% |
| !! | TTTTGCATTTTGTATTCATC+TGG | + | tig0027178:35786-35805 | Msa1432810:intron | 25.0% |
| !! | TTTGCATTTTGTATTCATCT+GGG | + | tig0027178:35787-35806 | Msa1432810:intron | 25.0% |
| ! | CCAACAAAATCAAAAACAAA+AGG | - | tig0027178:35840-35859 | None:intergenic | 25.0% |
| !!! | CCTTTTGTTTTTGATTTTGT+TGG | + | tig0027178:35837-35856 | Msa1432810:intron | 25.0% |
| ! | ATTGTTATATAGTTTGGACA+TGG | + | tig0027178:35870-35889 | Msa1432810:intron | 25.0% |
| ! | AAGAACATATTTCTTGACAA+TGG | - | tig0027178:35940-35959 | None:intergenic | 25.0% |
| ! | TTGTCAAGAAATATGTTCTT+AGG | + | tig0027178:35940-35959 | Msa1432810:CDS | 25.0% |
| !! | TTTTGAATGTTAACCAGTTT+TGG | + | tig0027178:36091-36110 | Msa1432810:intron | 25.0% |
| !!! | AACTTTTTCAAATCCAAAAC+TGG | - | tig0027178:36107-36126 | None:intergenic | 25.0% |
| ! | TTTGGATTTGAAAAAGTTGT+TGG | + | tig0027178:36109-36128 | Msa1432810:intron | 25.0% |
| ! | AAACGCTTATTTATGTTACA+CGG | - | tig0027178:36176-36195 | None:intergenic | 25.0% |
| !! | TCAATTTTCTTTCTCACTAA+CGG | - | tig0027178:36451-36470 | None:intergenic | 25.0% |
| !!! | TTTTTTGTCCTTCAATTTAC+AGG | + | tig0027178:36479-36498 | Msa1432810:intron | 25.0% |
| !! | TGGAACACCATTTTATATTA+TGG | + | tig0027178:36578-36597 | Msa1432810:CDS | 25.0% |
| !! | GGAACACCATTTTATATTAT+GGG | + | tig0027178:36579-36598 | Msa1432810:CDS | 25.0% |
| !! | GAACACCATTTTATATTATG+GGG | + | tig0027178:36580-36599 | Msa1432810:CDS | 25.0% |
| !!! | ATGGTTTTAAATTGTGGTTA+TGG | + | tig0027178:36712-36731 | Msa1432810:intron | 25.0% |
| ! | TTGTATTAAATGAATGTGTC+AGG | + | tig0027178:36882-36901 | Msa1432810:intron | 25.0% |
| ! | TGTATTAAATGAATGTGTCA+GGG | + | tig0027178:36883-36902 | Msa1432810:intron | 25.0% |
| !! | TATTGATTATTGCAAAAGAC+AGG | + | tig0027178:37014-37033 | Msa1432810:CDS | 25.0% |
| ! | TATAAATCCATAGTGATACA+AGG | - | tig0027178:37162-37181 | None:intergenic | 25.0% |
| ! | ACTTATATAAGCTACAAAAG+AGG | + | tig0027178:37207-37226 | Msa1432810:intron | 25.0% |
| ! | CTTATATAAGCTACAAAAGA+GGG | + | tig0027178:37208-37227 | Msa1432810:intron | 25.0% |
| ! | TTATATAAGCTACAAAAGAG+GGG | + | tig0027178:37209-37228 | Msa1432810:intron | 25.0% |
| !! | TCAATCAAAGCAAACATTTT+TGG | - | tig0027178:37371-37390 | None:intergenic | 25.0% |
| ! | AAATGTTTGCTTTGATTGAT+TGG | + | tig0027178:37372-37391 | Msa1432810:CDS | 25.0% |
| !! | AATGCATAGATTTTTCTATC+TGG | + | tig0027178:37577-37596 | Msa1432810:intron | 25.0% |
| ! | TACATAGACAGCAAAAATTT+CGG | - | tig0027178:37647-37666 | None:intergenic | 25.0% |
| ! | ATGTATCATATTAAGGAGTT+TGG | + | tig0027178:37662-37681 | Msa1432810:intron | 25.0% |
| ! | TCATGATCTAAACAAAAATC+AGG | - | tig0027178:37922-37941 | None:intergenic | 25.0% |
| !!! | GATTTTTGTTTAGATCATGA+TGG | + | tig0027178:37922-37941 | Msa1432810:intron | 25.0% |
| ! | CAGTGTTATGTTAAAGATAT+TGG | + | tig0027178:38062-38081 | Msa1432810:intron | 25.0% |
| ! | TTGTTAGAATTCTTTAGTAG+AGG | - | tig0027178:38223-38242 | None:intergenic | 25.0% |
| ! | TATTACTACACTAATATCTG+AGG | + | tig0027178:38877-38896 | Msa1432810:intron | 25.0% |
| !!! | CCTATTGTTAAATATTTTGG+AGG | - | tig0027178:39264-39283 | None:intergenic | 25.0% |
| ! | CCTCCAAAATATTTAACAAT+AGG | + | tig0027178:39261-39280 | Msa1432810:intron | 25.0% |
| ! | TTGAATAATAGTGTGAACTT+AGG | - | tig0027178:39510-39529 | None:intergenic | 25.0% |
| !! | ATAAACACATTCTAAAAGCA+TGG | - | tig0027178:39631-39650 | None:intergenic | 25.0% |
| !! | TTTGAAAATTTGAGATGCAA+CGG | - | tig0027178:39871-39890 | None:intergenic | 25.0% |
| !! | CTTTAACTTATAGGTTGAAA+TGG | + | tig0027178:40009-40028 | Msa1432810:intron | 25.0% |
| ! | CAAAGAAAATTCTGTTTGAT+GGG | + | tig0027178:40218-40237 | Msa1432810:CDS | 25.0% |
| ! | ATTACATTTGTGTTCGATAA+GGG | + | tig0027178:40451-40470 | Msa1432810:intron | 25.0% |
| !!! | GTAATATAGTCTTGCATTTT+AGG | + | tig0027178:40475-40494 | Msa1432810:intron | 25.0% |
| ! | ATAAAGAACAAATGCTAGAA+TGG | + | tig0027178:40516-40535 | Msa1432810:CDS | 25.0% |
| !! | TAGATAATTCTACCTTTTGA+TGG | - | tig0027178:40633-40652 | None:intergenic | 25.0% |
| ! | TTTATCTAAACAGAACCTTA+AGG | + | tig0027178:41010-41029 | Msa1432810:intron | 25.0% |
| ! | TTATCTAAACAGAACCTTAA+GGG | + | tig0027178:41011-41030 | Msa1432810:intron | 25.0% |
| !! | CTTAATTTTTCTCTTTTCAC+AGG | + | tig0027178:41098-41117 | Msa1432810:intron | 25.0% |
| ! | TTATAAATGGAACAAAATGG+TGG | + | tig0027178:41137-41156 | Msa1432810:CDS | 25.0% |
| ! | ATTTCAATTGTTGAAGTTGT+AGG | + | tig0027178:41602-41621 | Msa1432810:intron | 25.0% |
| ! | TTAGTAATAGAGATAGGAAA+AGG | + | tig0027178:41634-41653 | Msa1432810:intron | 25.0% |
| ! | CAAATAAGTCGTGATATATA+AGG | + | tig0027178:41789-41808 | Msa1432810:intron | 25.0% |
| !! | CAGACTCAATAACTTTTTAT+TGG | + | tig0027178:41862-41881 | Msa1432810:intron | 25.0% |
| !! | ATATTTTCCTTATAGATGAG+GGG | - | tig0027178:41995-42014 | None:intergenic | 25.0% |
| !! | CATATTTTCCTTATAGATGA+GGG | - | tig0027178:41996-42015 | None:intergenic | 25.0% |
| !! | ACATATTTTCCTTATAGATG+AGG | - | tig0027178:41997-42016 | None:intergenic | 25.0% |
| !! | TAGTTTGAATGTTTTCTACT+AGG | + | tig0027178:42181-42200 | Msa1432810:intron | 25.0% |
| ! | AGTAAGCAAAGATCAAAAAA+GGG | - | tig0027178:42506-42525 | None:intergenic | 25.0% |
| ! | TAGTAAGCAAAGATCAAAAA+AGG | - | tig0027178:42507-42526 | None:intergenic | 25.0% |
| !!! | TTTTCTCTCATATTTAAGAC+AGG | - | tig0027178:43154-43173 | None:intergenic | 25.0% |
| !! | AGAAAAAAAAAAGGCACATT+TGG | + | tig0027178:43168-43187 | Msa1432810:three_prime_UTR | 25.0% |
| !! | TTATTTGGTCTTTGCCATTT+TGG | - | tig0027178:35403-35422 | None:intergenic | 30.0% |
| TATCTTTGTAATCATCATCG+GGG | + | tig0027178:35485-35504 | Msa1432810:five_prime_UTR | 30.0% | |
| AAGAAGAAGAAGATAGAGTT+GGG | - | tig0027178:35560-35579 | None:intergenic | 30.0% | |
| ! | AATTTTGGATTTGGATATGG+CGG | + | tig0027178:35638-35657 | Msa1432810:exon | 30.0% |
| ATGAATGAAAAATGGAACCT+GGG | - | tig0027178:35766-35785 | None:intergenic | 30.0% | |
| AATGAATGAAAAATGGAACC+TGG | - | tig0027178:35767-35786 | None:intergenic | 30.0% | |
| ATCTAATCCAACATACTTGA+TGG | + | tig0027178:35896-35915 | Msa1432810:CDS | 30.0% | |
| ATGGTATAAGTAAGAGATTC+AGG | + | tig0027178:36046-36065 | Msa1432810:intron | 30.0% | |
| AACGCTTATTTATGTTACAC+GGG | - | tig0027178:36175-36194 | None:intergenic | 30.0% | |
| AGTAAGCTGAAAAGAACTTA+TGG | + | tig0027178:36309-36328 | Msa1432810:intron | 30.0% | |
| TAAGCACTTGTAAGACTATT+TGG | - | tig0027178:36365-36384 | None:intergenic | 30.0% | |
| TCAGTAGATAAAATCTGAAG+AGG | + | tig0027178:36387-36406 | Msa1432810:intron | 30.0% | |
| ! | AAACAGAAAACTTTAGGAAC+TGG | - | tig0027178:36537-36556 | None:intergenic | 30.0% |
| TTGCACAAACAGAAAACTTT+AGG | - | tig0027178:36543-36562 | None:intergenic | 30.0% | |
| ! | TATATTATGGGGTATTTGGA+AGG | + | tig0027178:36591-36610 | Msa1432810:CDS | 30.0% |
| ACAAACCATACTGGTAATTT+GGG | - | tig0027178:36633-36652 | None:intergenic | 30.0% | |
| AACAAACCATACTGGTAATT+TGG | - | tig0027178:36634-36653 | None:intergenic | 30.0% | |
| ! | AAACTAAAATTACCGATTGC+AGG | + | tig0027178:36675-36694 | Msa1432810:intron | 30.0% |
| !!! | GTCATCATGGTTTTAAATTG+TGG | + | tig0027178:36706-36725 | Msa1432810:intron | 30.0% |
| !!! | TGCAATTTTGACTGCATTTT+AGG | - | tig0027178:36756-36775 | None:intergenic | 30.0% |
| AACAAAACTAATGACAATCG+TGG | - | tig0027178:36856-36875 | None:intergenic | 30.0% | |
| TTCATTACATTCTGCTAATG+TGG | + | tig0027178:36960-36979 | Msa1432810:CDS | 30.0% | |
| TGATAAACCTTGTATCACTA+TGG | + | tig0027178:37152-37171 | Msa1432810:intron | 30.0% | |
| !! | TACCAACTTGATAGCTTTAA+TGG | + | tig0027178:37267-37286 | Msa1432810:intron | 30.0% |
| ATCCATTAAAGCTATCAAGT+TGG | - | tig0027178:37272-37291 | None:intergenic | 30.0% | |
| ACACTTTATCAAAGTTCCTT+TGG | + | tig0027178:37518-37537 | Msa1432810:intron | 30.0% | |
| GCTGTCTATGTATCATATTA+AGG | + | tig0027178:37655-37674 | Msa1432810:intron | 30.0% | |
| TATATGCAACATCACACATT+TGG | - | tig0027178:37806-37825 | None:intergenic | 30.0% | |
| TGATGTTGCATATATCTGTA+TGG | + | tig0027178:37812-37831 | Msa1432810:CDS | 30.0% | |
| !! | AGTGTATAATAGATGGGTTA+AGG | + | tig0027178:38337-38356 | Msa1432810:intron | 30.0% |
| AATAGCATCTCTAACAAGTT+TGG | - | tig0027178:38366-38385 | None:intergenic | 30.0% | |
| ! | ATGCTATTGTCATTTGAGTT+TGG | + | tig0027178:38378-38397 | Msa1432810:intron | 30.0% |
| ! | TGCTATTGTCATTTGAGTTT+GGG | + | tig0027178:38379-38398 | Msa1432810:intron | 30.0% |
| !!! | CTGATTTCAGCTTTTTTTTC+AGG | - | tig0027178:38538-38557 | None:intergenic | 30.0% |
| TCAGTAGATAAGCTCAAATA+AGG | + | tig0027178:38620-38639 | Msa1432810:intron | 30.0% | |
| GCTTCTTTGTGTTCAATATA+GGG | + | tig0027178:38672-38691 | Msa1432810:intron | 30.0% | |
| AAATGCAAAAGAATTAGTGC+AGG | + | tig0027178:38927-38946 | Msa1432810:CDS | 30.0% | |
| TTATAAAACTCCTCTTCCAT+GGG | - | tig0027178:39042-39061 | None:intergenic | 30.0% | |
| TTTATAAAACTCCTCTTCCA+TGG | - | tig0027178:39043-39062 | None:intergenic | 30.0% | |
| AGCAGAATATAGATACATAC+AGG | - | tig0027178:39159-39178 | None:intergenic | 30.0% | |
| ACCTTAGCAATTAGTATACA+AGG | + | tig0027178:39304-39323 | Msa1432810:intron | 30.0% | |
| CCTTAGCAATTAGTATACAA+GGG | + | tig0027178:39305-39324 | Msa1432810:intron | 30.0% | |
| TTTGGATAAGAAGATGTTAG+TGG | + | tig0027178:39372-39391 | Msa1432810:intron | 30.0% | |
| !! | ATGTTAGTGGTTAGTTTCTT+AGG | + | tig0027178:39385-39404 | Msa1432810:intron | 30.0% |
| ! | GAAGTATTCAACCTTACATA+AGG | + | tig0027178:39604-39623 | Msa1432810:intron | 30.0% |
| GTGTAGAAGTTTCAAAATTG+TGG | + | tig0027178:39726-39745 | Msa1432810:intron | 30.0% | |
| GGAATCATTACAAGTATGTT+TGG | + | tig0027178:39747-39766 | Msa1432810:intron | 30.0% | |
| GACCTATTAAAAGAATCTTG+CGG | + | tig0027178:39801-39820 | Msa1432810:intron | 30.0% | |
| ! | TACCGCAAGATTCTTTTAAT+AGG | - | tig0027178:39806-39825 | None:intergenic | 30.0% |
| ! | AACTTATAGGTTGAAATGGT+AGG | + | tig0027178:40013-40032 | Msa1432810:intron | 30.0% |
| ! | ACTTATAGGTTGAAATGGTA+GGG | + | tig0027178:40014-40033 | Msa1432810:intron | 30.0% |
| GAGAAGATGATAATCTTATG+AGG | + | tig0027178:40067-40086 | Msa1432810:intron | 30.0% | |
| !! | ATGTGTATTTGCTTTTATGC+AGG | + | tig0027178:40177-40196 | Msa1432810:intron | 30.0% |
| GCAAAGAAAATTCTGTTTGA+TGG | + | tig0027178:40217-40236 | Msa1432810:CDS | 30.0% | |
| !! | TGATTCAAATGACTTGTTGT+TGG | + | tig0027178:40261-40280 | Msa1432810:CDS | 30.0% |
| !! | GATTCAAATGACTTGTTGTT+GGG | + | tig0027178:40262-40281 | Msa1432810:CDS | 30.0% |
| !! | ATTCAAATGACTTGTTGTTG+GGG | + | tig0027178:40263-40282 | Msa1432810:CDS | 30.0% |
| GCTCCACAAATATTTAATTG+TGG | + | tig0027178:40346-40365 | Msa1432810:CDS | 30.0% | |
| GCACCACAATTAAATATTTG+TGG | - | tig0027178:40352-40371 | None:intergenic | 30.0% | |
| TGGAGGTAAGATGATATTAT+AGG | + | tig0027178:40389-40408 | Msa1432810:intron | 30.0% | |
| GATGATATTATAGGTTTGCA+AGG | + | tig0027178:40398-40417 | Msa1432810:intron | 30.0% | |
| CATTACATTTGTGTTCGATA+AGG | + | tig0027178:40450-40469 | Msa1432810:intron | 30.0% | |
| !!! | TTTTAGGTTTTATTGCGCAA+CGG | + | tig0027178:40491-40510 | Msa1432810:intron | 30.0% |
| TTTGATGGAACACTCAATAT+TGG | - | tig0027178:40618-40637 | None:intergenic | 30.0% | |
| ATATTGAGTGTTCCATCAAA+AGG | + | tig0027178:40618-40637 | Msa1432810:CDS | 30.0% | |
| !! | CTTATTTTCATTAGTTCTCC+AGG | + | tig0027178:40799-40818 | Msa1432810:intron | 30.0% |
| AGTATAAGAATTCTGCATCT+TGG | - | tig0027178:41181-41200 | None:intergenic | 30.0% | |
| ATGCAGAATTCTTATACTCA+TGG | + | tig0027178:41183-41202 | Msa1432810:CDS | 30.0% | |
| ACAACAATCAATGATCTTAG+TGG | + | tig0027178:41332-41351 | Msa1432810:CDS | 30.0% | |
| TTCACCCATTAAGATATTTG+TGG | - | tig0027178:41466-41485 | None:intergenic | 30.0% | |
| ! | ACAAATATCTTAATGGGTGA+AGG | + | tig0027178:41465-41484 | Msa1432810:CDS | 30.0% |
| TTAAGAATTAGGACATGATG+TGG | + | tig0027178:41536-41555 | Msa1432810:intron | 30.0% | |
| ! | TCCACAAAACCAAATTTTGT+AGG | + | tig0027178:41574-41593 | Msa1432810:intron | 30.0% |
| !!! | ACCTACAAAATTTGGTTTTG+TGG | - | tig0027178:41578-41597 | None:intergenic | 30.0% |
| GCTTATCACTTAAGATTGAT+TGG | - | tig0027178:42023-42042 | None:intergenic | 30.0% | |
| AAATTGACAGATGAAAGTTG+AGG | - | tig0027178:42113-42132 | None:intergenic | 30.0% | |
| CATTTAACTCTTTAAGCCAT+GGG | - | tig0027178:42138-42157 | None:intergenic | 30.0% | |
| TCATTTAACTCTTTAAGCCA+TGG | - | tig0027178:42139-42158 | None:intergenic | 30.0% | |
| ! | CTCTTAGTAGAAAAGCTTTT+GGG | + | tig0027178:42391-42410 | Msa1432810:CDS | 30.0% |
| TGTTACTATCATTTCACTCA+TGG | + | tig0027178:42671-42690 | Msa1432810:intron | 30.0% | |
| TTTCTTTCAAATCACCACTA+TGG | + | tig0027178:42698-42717 | Msa1432810:intron | 30.0% | |
| ! | TTCTAATTCTAACTTGCCTA+TGG | - | tig0027178:42895-42914 | None:intergenic | 30.0% |
| TTCTATTTGTTCTCAAAGCT+TGG | - | tig0027178:42928-42947 | None:intergenic | 30.0% | |
| ACCAAATAAAAGCTCATGAA+AGG | + | tig0027178:42952-42971 | Msa1432810:three_prime_UTR | 30.0% | |
| CCAAATAAAAGCTCATGAAA+GGG | + | tig0027178:42953-42972 | Msa1432810:three_prime_UTR | 30.0% | |
| CTTAGAACACTTTATTAGTG+GGG | - | tig0027178:42988-43007 | None:intergenic | 30.0% | |
| CCTTAGAACACTTTATTAGT+GGG | - | tig0027178:42989-43008 | None:intergenic | 30.0% | |
| TCCTTAGAACACTTTATTAG+TGG | - | tig0027178:42990-43009 | None:intergenic | 30.0% | |
| ! | GGTTTTTCATTGTATATTCC+TGG | + | tig0027178:43099-43118 | Msa1432810:three_prime_UTR | 30.0% |
| AAGATATGTTTGTGTCTGTC+TGG | - | tig0027178:35471-35490 | None:intergenic | 35.0% | |
| AGAAGAAGAAGATAGAGTTG+GGG | - | tig0027178:35559-35578 | None:intergenic | 35.0% | |
| GAAGAAGAAGAAGATAGAGT+TGG | - | tig0027178:35561-35580 | None:intergenic | 35.0% | |
| ! | ATTTTGGATTTGGATATGGC+GGG | + | tig0027178:35639-35658 | Msa1432810:exon | 35.0% |
| AATAATTGAGGAGAGAGTCA+TGG | - | tig0027178:35692-35711 | None:intergenic | 35.0% | |
| CGTTGGAAGAACAATAATTG+AGG | - | tig0027178:35704-35723 | None:intergenic | 35.0% | |
| TATTGTTCTTCCAACGTTTC+TGG | + | tig0027178:35708-35727 | Msa1432810:CDS | 35.0% | |
| ! | TTGATGGAAGTTGGTTCAAA+TGG | + | tig0027178:35912-35931 | Msa1432810:CDS | 35.0% |
| GGTATAGAATGAGACATGTT+TGG | + | tig0027178:36130-36149 | Msa1432810:intron | 35.0% | |
| !!! | AAACTATTTTGACGAGCTTG+TGG | + | tig0027178:36285-36304 | Msa1432810:intron | 35.0% |
| ! | AACTTTAGGAACTGGAACAT+TGG | - | tig0027178:36529-36548 | None:intergenic | 35.0% |
| TGCAATGATCCAACTGTTAT+TGG | + | tig0027178:36558-36577 | Msa1432810:CDS | 35.0% | |
| AATGGTGTTCCAATAACAGT+TGG | - | tig0027178:36570-36589 | None:intergenic | 35.0% | |
| TGCACATAAACAAACCATAC+TGG | - | tig0027178:36642-36661 | None:intergenic | 35.0% | |
| TAAATGAATGTGTCAGGGTT+TGG | + | tig0027178:36888-36907 | Msa1432810:intron | 35.0% | |
| AGCAGAATGTAATGAAGCTA+AGG | - | tig0027178:36956-36975 | None:intergenic | 35.0% | |
| AGGTTTATCAAGCAGTCAAA+TGG | - | tig0027178:37142-37161 | None:intergenic | 35.0% | |
| !! | AAAGCTATCAAGTTGGTATC+TGG | - | tig0027178:37265-37284 | None:intergenic | 35.0% |
| !! | AACATTTTTGGATTGCTTGC+AGG | - | tig0027178:37359-37378 | None:intergenic | 35.0% |
| CAAATGAATCTTACCTCTGT+GGG | - | tig0027178:37488-37507 | None:intergenic | 35.0% | |
| ! | CAGTGCTAAGATTAGCATTT+TGG | + | tig0027178:37686-37705 | Msa1432810:intron | 35.0% |
| CAGCAGAAACAAAACATATC+AGG | - | tig0027178:37733-37752 | None:intergenic | 35.0% | |
| !!! | ATATGTTTTGTTTCTGCTGC+AGG | + | tig0027178:37734-37753 | Msa1432810:intron | 35.0% |
| AGTAATTGGCATACTTGACT+GGG | + | tig0027178:37761-37780 | Msa1432810:CDS | 35.0% | |
| ATCACACATTTGGTTACCAA+GGG | - | tig0027178:37796-37815 | None:intergenic | 35.0% | |
| ! | AAGATCTTGGTGCATAAAGA+TGG | + | tig0027178:37863-37882 | Msa1432810:intron | 35.0% |
| CAATATTCAGCCAAAAACTC+TGG | - | tig0027178:38149-38168 | None:intergenic | 35.0% | |
| ! | AACAATGAGTTTTTGATGCC+AGG | + | tig0027178:38238-38257 | Msa1432810:intron | 35.0% |
| ! | ACAATGAGTTTTTGATGCCA+GGG | + | tig0027178:38239-38258 | Msa1432810:intron | 35.0% |
| ATGCTGGAGTGTATAATAGA+TGG | + | tig0027178:38330-38349 | Msa1432810:intron | 35.0% | |
| TGCTGGAGTGTATAATAGAT+GGG | + | tig0027178:38331-38350 | Msa1432810:intron | 35.0% | |
| ! | GTCATTTGAGTTTGGGATTT+AGG | + | tig0027178:38386-38405 | Msa1432810:intron | 35.0% |
| GGCTTCTTTGTGTTCAATAT+AGG | + | tig0027178:38671-38690 | Msa1432810:intron | 35.0% | |
| TCAATATAGGGTAATGCATC+TGG | + | tig0027178:38684-38703 | Msa1432810:intron | 35.0% | |
| !! | TACACAGAAGTACTTGCTAA+TGG | + | tig0027178:38723-38742 | Msa1432810:CDS | 35.0% |
| !! | AGCACTAAAACCTTTTGACT+AGG | - | tig0027178:38979-38998 | None:intergenic | 35.0% |
| !! | GTCAAAAGGTTTTAGTGCTA+AGG | + | tig0027178:38980-38999 | Msa1432810:CDS | 35.0% |
| TATAAAACTCCTCTTCCATG+GGG | - | tig0027178:39041-39060 | None:intergenic | 35.0% | |
| AGAGGAAAAATTGAAGGAGT+TGG | + | tig0027178:39101-39120 | Msa1432810:CDS | 35.0% | |
| CCCTTGTATACTAATTGCTA+AGG | - | tig0027178:39308-39327 | None:intergenic | 35.0% | |
| !! | TTAGTGGTTAGTTTCTTAGG+AGG | + | tig0027178:39388-39407 | Msa1432810:intron | 35.0% |
| ATACCACTAAGCTACATCTT+AGG | + | tig0027178:39481-39500 | Msa1432810:intron | 35.0% | |
| TACCACTAAGCTACATCTTA+GGG | + | tig0027178:39482-39501 | Msa1432810:intron | 35.0% | |
| ! | AAAAGCATGGACCTTATGTA+AGG | - | tig0027178:39618-39637 | None:intergenic | 35.0% |
| AACTTCTCAAGAATCATGCA+TGG | + | tig0027178:39773-39792 | Msa1432810:intron | 35.0% | |
| TGTAAAGACTTCTCCATAAC+TGG | + | tig0027178:39930-39949 | Msa1432810:intron | 35.0% | |
| TGTCTATGATTCTCCAGTTA+TGG | - | tig0027178:39946-39965 | None:intergenic | 35.0% | |
| AATGGTAGGGCATATTTAGA+TGG | + | tig0027178:40027-40046 | Msa1432810:intron | 35.0% | |
| !! | TTCAAATGACTTGTTGTTGG+GGG | + | tig0027178:40264-40283 | Msa1432810:CDS | 35.0% |
| GGTCTAACAAATCTCGAATA+TGG | + | tig0027178:40289-40308 | Msa1432810:CDS | 35.0% | |
| CTCTTAAATAGTCTCACAAG+TGG | - | tig0027178:40748-40767 | None:intergenic | 35.0% | |
| !! | GCTGTTTTCATAAGTTATCC+TGG | - | tig0027178:40820-40839 | None:intergenic | 35.0% |
| AGTTAAACTCAACACCCTTA+AGG | - | tig0027178:41028-41047 | None:intergenic | 35.0% | |
| ! | GAGTTTAACTTCTCGATAGA+AGG | + | tig0027178:41038-41057 | Msa1432810:intron | 35.0% |
| ! | TTTTTCTCTTTTCACAGGCA+AGG | + | tig0027178:41103-41122 | Msa1432810:intron | 35.0% |
| AGAGTAATTGATCAAGCACA+TGG | + | tig0027178:41271-41290 | Msa1432810:intron | 35.0% | |
| GAGTAATTGATCAAGCACAT+GGG | + | tig0027178:41272-41291 | Msa1432810:intron | 35.0% | |
| TCACATAAAGAGACCTTTGA+CGG | + | tig0027178:41374-41393 | Msa1432810:CDS | 35.0% | |
| CCTGCCACAAATATCTTAAT+GGG | + | tig0027178:41459-41478 | Msa1432810:CDS | 35.0% | |
| GAGCATAGATCAAATTACAC+TGG | + | tig0027178:41814-41833 | Msa1432810:intron | 35.0% | |
| ATTACACTGGTGTAACACTT+AGG | + | tig0027178:41827-41846 | Msa1432810:intron | 35.0% | |
| AGTTTAACCCCTCATCTATA+AGG | + | tig0027178:41985-42004 | Msa1432810:intron | 35.0% | |
| ! | GCTCTTAGTAGAAAAGCTTT+TGG | + | tig0027178:42390-42409 | Msa1432810:CDS | 35.0% |
| TGGCTCATTTGTTTCAGATT+TGG | + | tig0027178:42431-42450 | Msa1432810:CDS | 35.0% | |
| ATTTGTTTCAGATTTGGCCA+AGG | + | tig0027178:42437-42456 | Msa1432810:CDS | 35.0% | |
| TATGGAAACAAAAAAGCTCG+AGG | + | tig0027178:42607-42626 | Msa1432810:CDS | 35.0% | |
| ATGGAAACAAAAAAGCTCGA+GGG | + | tig0027178:42608-42627 | Msa1432810:CDS | 35.0% | |
| ! | AGTACCATCAATCCCATTTT+TGG | - | tig0027178:42750-42769 | None:intergenic | 35.0% |
| ! | CCCTTTCATGAGCTTTTATT+TGG | - | tig0027178:42956-42975 | None:intergenic | 35.0% |
| ! | CCCACTAATAAAGTGTTCTA+AGG | + | tig0027178:42986-43005 | Msa1432810:three_prime_UTR | 35.0% |
| TCCTACAATCACGACCAAAA+TGG | + | tig0027178:35386-35405 | Msa1432810:five_prime_UTR | 40.0% | |
| AAGAAGAAGATAGAGTTGGG+GGG | - | tig0027178:35557-35576 | None:intergenic | 40.0% | |
| GAAGAAGAAGATAGAGTTGG+GGG | - | tig0027178:35558-35577 | None:intergenic | 40.0% | |
| ! | TTTTGGATTTGGATATGGCG+GGG | + | tig0027178:35640-35659 | Msa1432810:exon | 40.0% |
| ! | TGAAATGAGTTGGAGAGAGA+GGG | - | tig0027178:35737-35756 | None:intergenic | 40.0% |
| ! | TTGAAATGAGTTGGAGAGAG+AGG | - | tig0027178:35738-35757 | None:intergenic | 40.0% |
| TGGGAGAGATTGAAATGAGT+TGG | - | tig0027178:35747-35766 | None:intergenic | 40.0% | |
| AACTCATTTCAATCTCTCCC+AGG | + | tig0027178:35746-35765 | Msa1432810:CDS | 40.0% | |
| CCAACTTCCATCAAGTATGT+TGG | - | tig0027178:35906-35925 | None:intergenic | 40.0% | |
| CCAACATACTTGATGGAAGT+TGG | + | tig0027178:35903-35922 | Msa1432810:CDS | 40.0% | |
| TTCTTAGGAAAAAGCCTGCT+GGG | + | tig0027178:35955-35974 | Msa1432810:CDS | 40.0% | |
| TGCTGTTGAAAGAGAGTTTC+AGG | + | tig0027178:35998-36017 | Msa1432810:CDS | 40.0% | |
| GAGCTTACGAAAACAGCTTA+TGG | - | tig0027178:36340-36359 | None:intergenic | 40.0% | |
| CTGGAGAACCTGTAAATTGA+AGG | - | tig0027178:36490-36509 | None:intergenic | 40.0% | |
| CTTCAATTTACAGGTTCTCC+AGG | + | tig0027178:36488-36507 | Msa1432810:intron | 40.0% | |
| ! | TTATGGGGTATTTGGAAGGA+CGG | + | tig0027178:36595-36614 | Msa1432810:CDS | 40.0% |
| TCGATCCCAAATTACCAGTA+TGG | + | tig0027178:36625-36644 | Msa1432810:intron | 40.0% | |
| ! | AAAATTACCGATTGCAGGAC+TGG | + | tig0027178:36680-36699 | Msa1432810:intron | 40.0% |
| !!! | GTTATGGTCGCAGTTTTGTT+GGG | + | tig0027178:36728-36747 | Msa1432810:intron | 40.0% |
| GGATTTAGAGATCTCTGCAA+TGG | - | tig0027178:36788-36807 | None:intergenic | 40.0% | |
| ! | AGAGTAGGAGCGCAATTTAT+CGG | + | tig0027178:36917-36936 | Msa1432810:intron | 40.0% |
| TCTGCTAATGTGGATTCCAT+CGG | + | tig0027178:36970-36989 | Msa1432810:CDS | 40.0% | |
| ! | TGTCTCCTTGTTTACAGTCA+AGG | + | tig0027178:37053-37072 | Msa1432810:intron | 40.0% |
| CACAACCTTGACTGTAAACA+AGG | - | tig0027178:37061-37080 | None:intergenic | 40.0% | |
| TAAGCTACAAAAGAGGGGTT+AGG | + | tig0027178:37214-37233 | Msa1432810:intron | 40.0% | |
| ATATGTCTCCTCAACAAGTG+AGG | + | tig0027178:37328-37347 | Msa1432810:CDS | 40.0% | |
| TATGTCTCCTCAACAAGTGA+GGG | + | tig0027178:37329-37348 | Msa1432810:CDS | 40.0% | |
| ! | ATCCCTTCTGAAGATTCTTC+AGG | + | tig0027178:37407-37426 | Msa1432810:CDS | 40.0% |
| CTCCTGAAGAATCTTCAGAA+GGG | - | tig0027178:37412-37431 | None:intergenic | 40.0% | |
| CCAAATGAATCTTACCTCTG+TGG | - | tig0027178:37489-37508 | None:intergenic | 40.0% | |
| CCACAGAGGTAAGATTCATT+TGG | + | tig0027178:37486-37505 | Msa1432810:intron | 40.0% | |
| GTTCCTTTGGCTGAAAAACT+TGG | + | tig0027178:37531-37550 | Msa1432810:intron | 40.0% | |
| !!! | GCATTTTGGAGTTAGAATCC+AGG | + | tig0027178:37700-37719 | Msa1432810:intron | 40.0% |
| AACATATCAGGCATAAGACC+TGG | - | tig0027178:37721-37740 | None:intergenic | 40.0% | |
| GAGTAATTGGCATACTTGAC+TGG | + | tig0027178:37760-37779 | Msa1432810:CDS | 40.0% | |
| CATCACACATTTGGTTACCA+AGG | - | tig0027178:37797-37816 | None:intergenic | 40.0% | |
| ! | GACGTTCTGAATCAAGATCT+TGG | + | tig0027178:37850-37869 | Msa1432810:intron | 40.0% |
| ! | AAAGAGCGTACAAGAAGGTA+TGG | + | tig0027178:38088-38107 | Msa1432810:CDS | 40.0% |
| ! | TCCTTCTCTACCAGAGTTTT+TGG | + | tig0027178:38136-38155 | Msa1432810:CDS | 40.0% |
| TTTGATGCCAGGGAAGAAAA+TGG | + | tig0027178:38249-38268 | Msa1432810:intron | 40.0% | |
| TAGAACTTCCATTCAGCAAC+AGG | - | tig0027178:38275-38294 | None:intergenic | 40.0% | |
| ! | GTTGCCTTTTCTTTTTTCCG+AGG | + | tig0027178:38296-38315 | Msa1432810:CDS | 40.0% |
| TCAGCGTATAGACATGTCAT+AGG | + | tig0027178:38554-38573 | Msa1432810:intron | 40.0% | |
| ATATAGGGTAATGCATCTGG+TGG | + | tig0027178:38687-38706 | Msa1432810:intron | 40.0% | |
| CTTCAGGTAGCTATACCAAT+GGG | + | tig0027178:38805-38824 | Msa1432810:intron | 40.0% | |
| ! | AAGGTTTGCTCCTAGTCAAA+AGG | + | tig0027178:38966-38985 | Msa1432810:CDS | 40.0% |
| ! | CCTTCAATTTTTCCTCTGCT+GGG | - | tig0027178:39098-39117 | None:intergenic | 40.0% |
| ! | TCCTTCAATTTTTCCTCTGC+TGG | - | tig0027178:39099-39118 | None:intergenic | 40.0% |
| AAGGAGTTGGCAAAGAAAGA+AGG | + | tig0027178:39114-39133 | Msa1432810:CDS | 40.0% | |
| ! | GTTAGTTTCTTAGGAGGAGA+GGG | + | tig0027178:39394-39413 | Msa1432810:intron | 40.0% |
| !! | CTGAAGGAGTATTAAGAAGG+AGG | - | tig0027178:39450-39469 | None:intergenic | 40.0% |
| !! | ACGCTGAAGGAGTATTAAGA+AGG | - | tig0027178:39453-39472 | None:intergenic | 40.0% |
| GTAGCTTAGTGGTATGAGTT+GGG | - | tig0027178:39476-39495 | None:intergenic | 40.0% | |
| TGTAGCTTAGTGGTATGAGT+TGG | - | tig0027178:39477-39496 | None:intergenic | 40.0% | |
| ACCACTAAGCTACATCTTAG+GGG | + | tig0027178:39483-39502 | Msa1432810:intron | 40.0% | |
| ! | CACGTTTAGTTCATTCTCAG+TGG | - | tig0027178:39570-39589 | None:intergenic | 40.0% |
| CACTGAGAATGAACTAAACG+TGG | + | tig0027178:39568-39587 | Msa1432810:intron | 40.0% | |
| TGAGAATGAACTAAACGTGG+TGG | + | tig0027178:39571-39590 | Msa1432810:intron | 40.0% | |
| AAGAATCTTGCGGTAACGAT+CGG | + | tig0027178:39811-39830 | Msa1432810:intron | 40.0% | |
| CGGCTAATTTCATCTCACAT+GGG | - | tig0027178:39851-39870 | None:intergenic | 40.0% | |
| ACGGCTAATTTCATCTCACA+TGG | - | tig0027178:39852-39871 | None:intergenic | 40.0% | |
| TGGATACCTTTGTGAGTTCA+TGG | + | tig0027178:40309-40328 | Msa1432810:CDS | 40.0% | |
| GGATACCTTTGTGAGTTCAT+GGG | + | tig0027178:40310-40329 | Msa1432810:CDS | 40.0% | |
| AATGACCCATGAACTCACAA+AGG | - | tig0027178:40318-40337 | None:intergenic | 40.0% | |
| ATGGCTTATTCCTTTGCTTG+AGG | + | tig0027178:40535-40554 | Msa1432810:CDS | 40.0% | |
| TGGCTTATTCCTTTGCTTGA+GGG | + | tig0027178:40536-40555 | Msa1432810:CDS | 40.0% | |
| GCATCAGAAGATGCAATTTG+CGG | - | tig0027178:40593-40612 | None:intergenic | 40.0% | |
| TCTTTCCATTCAGCTGATTG+AGG | + | tig0027178:40680-40699 | Msa1432810:intron | 40.0% | |
| CTTTCCATTCAGCTGATTGA+GGG | + | tig0027178:40681-40700 | Msa1432810:intron | 40.0% | |
| ! | AAACTGACTTCAATGCAGCA+AGG | + | tig0027178:41304-41323 | Msa1432810:CDS | 40.0% |
| GCCTGCCACAAATATCTTAA+TGG | + | tig0027178:41458-41477 | Msa1432810:CDS | 40.0% | |
| CCCATTAAGATATTTGTGGC+AGG | - | tig0027178:41462-41481 | None:intergenic | 40.0% | |
| TCATCTGTCAATTTCTCCCA+TGG | + | tig0027178:42119-42138 | Msa1432810:intron | 40.0% | |
| CACCACTGTATGAGACTAAT+AGG | + | tig0027178:42330-42349 | Msa1432810:CDS | 40.0% | |
| CTTGCTCAACTCTAATACCT+TGG | - | tig0027178:42457-42476 | None:intergenic | 40.0% | |
| ! | TAGTCTTCTCTAGCTCGATT+CGG | - | tig0027178:42549-42568 | None:intergenic | 40.0% |
| AGGGATAATTGCAATGGCTA+AGG | + | tig0027178:42627-42646 | Msa1432810:CDS | 40.0% | |
| TTTCAAATCACCACTATGGC+TGG | + | tig0027178:42702-42721 | Msa1432810:intron | 40.0% | |
| ! | CAGTGTTCTGCAATGCTTTT+TGG | + | tig0027178:43035-43054 | Msa1432810:three_prime_UTR | 40.0% |
| AATTAAACGAGTGACACACC+AGG | - | tig0027178:43120-43139 | None:intergenic | 40.0% | |
| !! | GCCATTTTGGTCGTGATTGT+AGG | - | tig0027178:35390-35409 | None:intergenic | 45.0% |
| AGAAGAAGATAGAGTTGGGG+GGG | - | tig0027178:35556-35575 | None:intergenic | 45.0% | |
| TGGTTGAAATGGTGAGAGTC+AGG | - | tig0027178:35672-35691 | None:intergenic | 45.0% | |
| GGAGAGAGTCATGGTTGAAA+TGG | - | tig0027178:35683-35702 | None:intergenic | 45.0% | |
| GTTCTTAGGAAAAAGCCTGC+TGG | + | tig0027178:35954-35973 | Msa1432810:CDS | 45.0% | |
| AAAGCCTGCTGGGAAATTGT+TGG | + | tig0027178:35965-35984 | Msa1432810:CDS | 45.0% | |
| TGGTATTATTGCCTAGAGCC+TGG | - | tig0027178:36509-36528 | None:intergenic | 45.0% | |
| TGACAATCCAGTCCTGCAAT+CGG | - | tig0027178:36690-36709 | None:intergenic | 45.0% | |
| !! | GGTTATGGTCGCAGTTTTGT+TGG | + | tig0027178:36727-36746 | Msa1432810:intron | 45.0% |
| AGCTGCAGCTGCAATTCAAA+AGG | - | tig0027178:36809-36828 | None:intergenic | 45.0% | |
| TAAATTGCGCTCCTACTCTG+TGG | - | tig0027178:36916-36935 | None:intergenic | 45.0% | |
| ! | GAGTAGGAGCGCAATTTATC+GGG | + | tig0027178:36918-36937 | Msa1432810:intron | 45.0% |
| TAATGTGGATTCCATCGGTC+TGG | + | tig0027178:36975-36994 | Msa1432810:CDS | 45.0% | |
| AATGTGGATTCCATCGGTCT+GGG | + | tig0027178:36976-36995 | Msa1432810:CDS | 45.0% | |
| TCCATCGGTCTGGGAAATTA+CGG | + | tig0027178:36985-37004 | Msa1432810:CDS | 45.0% | |
| TACAAAAGAGGGGTTAGGTG+AGG | + | tig0027178:37219-37238 | Msa1432810:intron | 45.0% | |
| ACAAAAGAGGGGTTAGGTGA+GGG | + | tig0027178:37220-37239 | Msa1432810:intron | 45.0% | |
| ! | AGGTTTACCCTCACTTGTTG+AGG | - | tig0027178:37339-37358 | None:intergenic | 45.0% |
| GCTCCTGAAGAATCTTCAGA+AGG | - | tig0027178:37413-37432 | None:intergenic | 45.0% | |
| TGAATCTTACCTCTGTGGGA+TGG | - | tig0027178:37484-37503 | None:intergenic | 45.0% | |
| !! | GGACCAAGTTTTTCAGCCAA+AGG | - | tig0027178:37537-37556 | None:intergenic | 45.0% |
| ! | CAAGAAGGTATGGAACGTTC+TGG | + | tig0027178:38098-38117 | Msa1432810:CDS | 45.0% |
| ! | GAACGTTCTGGATTACCACA+GGG | + | tig0027178:38110-38129 | Msa1432810:CDS | 45.0% |
| GCCAAAAACTCTGGTAGAGA+AGG | - | tig0027178:38140-38159 | None:intergenic | 45.0% | |
| GAAAATGGCCTGTTGCTGAA+TGG | + | tig0027178:38264-38283 | Msa1432810:CDS | 45.0% | |
| AGCGCCTCGGAAAAAAGAAA+AGG | - | tig0027178:38303-38322 | None:intergenic | 45.0% | |
| ! | CAGCATAAATTGAAGCGCCT+CGG | - | tig0027178:38316-38335 | None:intergenic | 45.0% |
| TTGGTATAGCTACCTGAAGG+AGG | - | tig0027178:38804-38823 | None:intergenic | 45.0% | |
| CCATTGGTATAGCTACCTGA+AGG | - | tig0027178:38807-38826 | None:intergenic | 45.0% | |
| CCTTCAGGTAGCTATACCAA+TGG | + | tig0027178:38804-38823 | Msa1432810:intron | 45.0% | |
| GAGCAAACCTTCCCTCATTT+GGG | - | tig0027178:38957-38976 | None:intergenic | 45.0% | |
| ACACATATACCCCATGGAAG+AGG | + | tig0027178:39029-39048 | Msa1432810:CDS | 45.0% | |
| ! | TTTCCCAATCAGAAGCACGT+TGG | + | tig0027178:39064-39083 | Msa1432810:CDS | 45.0% |
| AGTCCAACGTGCTTCTGATT+GGG | - | tig0027178:39070-39089 | None:intergenic | 45.0% | |
| CCCAGCAGAGGAAAAATTGA+AGG | + | tig0027178:39095-39114 | Msa1432810:CDS | 45.0% | |
| AAGAAGGCCTGTGGAACTTA+TGG | + | tig0027178:39130-39149 | Msa1432810:CDS | 45.0% | |
| CAGGAATCCATAAGTTCCAC+AGG | - | tig0027178:39140-39159 | None:intergenic | 45.0% | |
| !! | GGTTAGTTTCTTAGGAGGAG+AGG | + | tig0027178:39393-39412 | Msa1432810:intron | 45.0% |
| !! | GAGGGAATTTGTTAGCAGCA+CGG | + | tig0027178:39412-39431 | Msa1432810:intron | 45.0% |
| !! | AGGGAATTTGTTAGCAGCAC+GGG | + | tig0027178:39413-39432 | Msa1432810:intron | 45.0% |
| TCCCCTAAGATGTAGCTTAG+TGG | - | tig0027178:39487-39506 | None:intergenic | 45.0% | |
| GGCTTATTCCTTTGCTTGAG+GGG | + | tig0027178:40537-40556 | Msa1432810:CDS | 45.0% | |
| CTAATCTTCCCCTCAAGCAA+AGG | - | tig0027178:40548-40567 | None:intergenic | 45.0% | |
| CTTTGCTTGAGGGGAAGATT+AGG | + | tig0027178:40546-40565 | Msa1432810:CDS | 45.0% | |
| !! | GGAACAAAATGGTGGACTAG+TGG | + | tig0027178:41145-41164 | Msa1432810:CDS | 45.0% |
| ! | TTAGTGGATACTCAGACACC+TGG | + | tig0027178:41348-41367 | Msa1432810:CDS | 45.0% |
| GGTCTCTTTATGTGAACACC+AGG | - | tig0027178:41369-41388 | None:intergenic | 45.0% | |
| AAGAGACCTTTGACGGTGTT+TGG | + | tig0027178:41381-41400 | Msa1432810:CDS | 45.0% | |
| TCAAAGCCAAACACCGTCAA+AGG | - | tig0027178:41390-41409 | None:intergenic | 45.0% | |
| ! | ATCTTAATGGGTGAAGGACG+TGG | + | tig0027178:41471-41490 | Msa1432810:CDS | 45.0% |
| GGACATGATGTGGACTCAAA+TGG | + | tig0027178:41546-41565 | Msa1432810:intron | 45.0% | |
| !!! | TTTTGCCGACTTGCATTTGC+AGG | + | tig0027178:42284-42303 | Msa1432810:intron | 45.0% |
| TTGCATTTGCAGGCTAGGTT+AGG | + | tig0027178:42294-42313 | Msa1432810:intron | 45.0% | |
| ! | CGCCTATTAGTCTCATACAG+TGG | - | tig0027178:42335-42354 | None:intergenic | 45.0% |
| GGGAAAATGATTGCTCAGCA+TGG | + | tig0027178:42411-42430 | Msa1432810:CDS | 45.0% | |
| GAATCGAGCTAGAGAAGACT+AGG | + | tig0027178:42548-42567 | Msa1432810:CDS | 45.0% | |
| TGTTTCCATACCGATCAAGC+TGG | - | tig0027178:42597-42616 | None:intergenic | 45.0% | |
| AGCTCGAGGGATAATTGCAA+TGG | + | tig0027178:42621-42640 | Msa1432810:CDS | 45.0% | |
| TAGGTAGCTGCGCCAAAAAT+GGG | + | tig0027178:42735-42754 | Msa1432810:intron | 45.0% | |
| TGCGCCAAAAATGGGATTGA+TGG | + | tig0027178:42743-42762 | Msa1432810:CDS | 45.0% | |
| ! | GGGATTGATGGTACTTGACA+TGG | + | tig0027178:42755-42774 | Msa1432810:CDS | 45.0% |
| TGTATCATCTGACACTGTCC+TGG | + | tig0027178:42803-42822 | Msa1432810:CDS | 45.0% | |
| AGGACATTGAGAATCGCAGA+CGG | + | tig0027178:42846-42865 | Msa1432810:CDS | 45.0% | |
| !! | AATATGATAATTTATTTATT+TGG | - | tig0027178:35418-35437 | None:intergenic | 5.0% |
| GAAGCCAACAATTTCCCAGC+AGG | - | tig0027178:35972-35991 | None:intergenic | 50.0% | |
| TTACAGGTTCTCCAGGCTCT+AGG | + | tig0027178:36495-36514 | Msa1432810:intron | 50.0% | |
| GCAGGACTGGATTGTCATCA+TGG | + | tig0027178:36693-36712 | Msa1432810:intron | 50.0% | |
| TTGAATTGCAGCTGCAGCTG+TGG | + | tig0027178:36810-36829 | Msa1432810:intron | 50.0% | |
| CCATCGGTCTGGGAAATTAC+GGG | + | tig0027178:36986-37005 | Msa1432810:CDS | 50.0% | |
| GATTCTTCAGGAGCAACAGC+AGG | + | tig0027178:37419-37438 | Msa1432810:CDS | 50.0% | |
| TCTTGTGTTCCATCCCACAG+AGG | + | tig0027178:37472-37491 | Msa1432810:CDS | 50.0% | |
| CTGCTGCAGGATCGAGTAAT+TGG | + | tig0027178:37747-37766 | Msa1432810:intron | 50.0% | |
| GACTGGGAACTATCTACCCT+TGG | + | tig0027178:37777-37796 | Msa1432810:CDS | 50.0% | |
| ! | GGCGAAAAGAGCGTACAAGA+AGG | + | tig0027178:38083-38102 | Msa1432810:CDS | 50.0% |
| ! | GGAACGTTCTGGATTACCAC+AGG | + | tig0027178:38109-38128 | Msa1432810:CDS | 50.0% |
| GGTAGAGAAGGAATTCCCTG+TGG | - | tig0027178:38128-38147 | None:intergenic | 50.0% | |
| !! | CAACAGGCCATTTTCTTCCC+TGG | - | tig0027178:38259-38278 | None:intergenic | 50.0% |
| ! | CGAGGCGCTTCAATTTATGC+TGG | + | tig0027178:38314-38333 | Msa1432810:CDS | 50.0% |
| ATGGTCTCATCGAAGCTGCT+TGG | + | tig0027178:38742-38761 | Msa1432810:CDS | 50.0% | |
| TGGTCTCATCGAAGCTGCTT+GGG | + | tig0027178:38743-38762 | Msa1432810:CDS | 50.0% | |
| GACGCAATGTGAGATCCCAT+TGG | - | tig0027178:38823-38842 | None:intergenic | 50.0% | |
| CAAACCTTCCCTCATTTGGG+AGG | - | tig0027178:38954-38973 | None:intergenic | 50.0% | |
| GGAGCAAACCTTCCCTCATT+TGG | - | tig0027178:38958-38977 | None:intergenic | 50.0% | |
| GGAGGAACACATATACCCCA+TGG | + | tig0027178:39023-39042 | Msa1432810:CDS | 50.0% | |
| CAGTCCAACGTGCTTCTGAT+TGG | - | tig0027178:39071-39090 | None:intergenic | 50.0% | |
| TGGCAAAGAAAGAAGGCCTG+TGG | + | tig0027178:39121-39140 | Msa1432810:CDS | 50.0% | |
| !! | AATGACTTGTTGTTGGGGGC+TGG | + | tig0027178:40268-40287 | Msa1432810:CDS | 50.0% |
| AATTGTGGTGCACCTGACAC+AGG | + | tig0027178:40361-40380 | Msa1432810:CDS | 50.0% | |
| TGCACCTGACACAGGTAACA+TGG | + | tig0027178:40369-40388 | Msa1432810:CDS | 50.0% | |
| ACCTGACACAGGTAACATGG+AGG | + | tig0027178:40372-40391 | Msa1432810:CDS | 50.0% | |
| ACCTCCATGTTACCTGTGTC+AGG | - | tig0027178:40376-40395 | None:intergenic | 50.0% | |
| CTTGAGGGGAAGATTAGGTC+TGG | + | tig0027178:40551-40570 | Msa1432810:CDS | 50.0% | |
| !! | ATGGTGGACTAGTGGTGCTA+TGG | + | tig0027178:41153-41172 | Msa1432810:CDS | 50.0% |
| TTGATCAAGCACATGGGCAC+AGG | + | tig0027178:41278-41297 | Msa1432810:intron | 50.0% | |
| TGATCAAGCACATGGGCACA+GGG | + | tig0027178:41279-41298 | Msa1432810:intron | 50.0% | |
| !! | GCTTTGATGATGCGCCTCAT+GGG | + | tig0027178:41403-41422 | Msa1432810:CDS | 50.0% |
| ACTACTTCTGCATGCCCATG+AGG | - | tig0027178:41420-41439 | None:intergenic | 50.0% | |
| CCTAGCCTGCAAATGCAAGT+CGG | - | tig0027178:42292-42311 | None:intergenic | 50.0% | |
| CATTAGTTGCATGCCTCGCT+CGG | - | tig0027178:42361-42380 | None:intergenic | 50.0% | |
| GCTAGAGAAGACTAGGTTGC+TGG | + | tig0027178:42555-42574 | Msa1432810:CDS | 50.0% | |
| GAAGACTAGGTTGCTGGTGT+TGG | + | tig0027178:42561-42580 | Msa1432810:CDS | 50.0% | |
| !! | ATCACCACTATGGCTGGTCT+TGG | + | tig0027178:42708-42727 | Msa1432810:intron | 50.0% |
| !! | TATGGCTGGTCTTGGAGTGT+AGG | + | tig0027178:42716-42735 | Msa1432810:intron | 50.0% |
| GTAGGTAGCTGCGCCAAAAA+TGG | + | tig0027178:42734-42753 | Msa1432810:intron | 50.0% | |
| GACATGGCCATTCAAGTGCA+TGG | + | tig0027178:42771-42790 | Msa1432810:CDS | 50.0% | |
| AGCTGCTCCATGCACTTGAA+TGG | - | tig0027178:42781-42800 | None:intergenic | 50.0% | |
| ATTCAAGTGCATGGAGCAGC+TGG | + | tig0027178:42780-42799 | Msa1432810:CDS | 50.0% | |
| GAAGTCCACTTGGGTACCAT+AGG | + | tig0027178:42876-42895 | Msa1432810:CDS | 50.0% | |
| ACTTGCCTATGGTACCCAAG+TGG | - | tig0027178:42884-42903 | None:intergenic | 50.0% | |
| GAGAGGGAAGCCAGAAACGT+TGG | - | tig0027178:35721-35740 | None:intergenic | 55.0% | |
| CCCGTAATTTCCCAGACCGA+TGG | - | tig0027178:36989-37008 | None:intergenic | 55.0% | |
| TTCAGGAGCAACAGCAGGCT+TGG | + | tig0027178:37424-37443 | Msa1432810:CDS | 55.0% | |
| ! | GCAACAGCAGGCTTGGTTCA+TGG | + | tig0027178:37431-37450 | Msa1432810:CDS | 55.0% |
| CTTCCTCAGCATCCTCCTTC+AGG | + | tig0027178:38789-38808 | Msa1432810:CDS | 55.0% | |
| CTACCTGAAGGAGGATGCTG+AGG | - | tig0027178:38795-38814 | None:intergenic | 55.0% | |
| AGTGCAGGACCTCCCAAATG+AGG | + | tig0027178:38942-38961 | Msa1432810:CDS | 55.0% | |
| GTGCAGGACCTCCCAAATGA+GGG | + | tig0027178:38943-38962 | Msa1432810:CDS | 55.0% | |
| AGGACCTCCCAAATGAGGGA+AGG | + | tig0027178:38947-38966 | Msa1432810:CDS | 55.0% | |
| TTGGACTGTTCACCCAGCAG+AGG | + | tig0027178:39083-39102 | Msa1432810:CDS | 55.0% | |
| TTAGCAGCACGGGTCGAATC+TGG | + | tig0027178:39423-39442 | Msa1432810:intron | 55.0% | |
| ! | GGTATGAGTTGGGACGCTGA+AGG | - | tig0027178:39466-39485 | None:intergenic | 55.0% |
| !! | TGCAGGTTGATAGTGCTGCG+AGG | + | tig0027178:40194-40213 | Msa1432810:intron | 55.0% |
| !! | GCAGGTTGATAGTGCTGCGA+GGG | + | tig0027178:40195-40214 | Msa1432810:intron | 55.0% |
| CTGGCCCTCAATCAGCTGAA+TGG | - | tig0027178:40688-40707 | None:intergenic | 55.0% | |
| GATCAAGCACATGGGCACAG+GGG | + | tig0027178:41280-41299 | Msa1432810:intron | 55.0% | |
| !! | GGCTTTGATGATGCGCCTCA+TGG | + | tig0027178:41402-41421 | Msa1432810:CDS | 55.0% |
| ! | CCGACTTGCATTTGCAGGCT+AGG | + | tig0027178:42289-42308 | Msa1432810:intron | 55.0% |
| TTGCAGGCTAGGTTAGGTCC+TGG | + | tig0027178:42300-42319 | Msa1432810:intron | 55.0% | |
| AGGCTAGGTTAGGTCCTGGA+AGG | + | tig0027178:42304-42323 | Msa1432810:intron | 55.0% | |
| ATACAGTGGTGCAGCCTTCC+AGG | - | tig0027178:42321-42340 | None:intergenic | 55.0% | |
| CGAGCGAGGCATGCAACTAA+TGG | + | tig0027178:42359-42378 | Msa1432810:CDS | 55.0% | |
| ATACCGATCAAGCTGGTCCG+CGG | - | tig0027178:42590-42609 | None:intergenic | 55.0% | |
| CACTCCAAGACCAGCCATAG+TGG | - | tig0027178:42715-42734 | None:intergenic | 55.0% | |
| ACACTGTCCTGGCTCATCTG+TGG | + | tig0027178:42814-42833 | Msa1432810:CDS | 55.0% | |
| CACTGTCCTGGCTCATCTGT+GGG | + | tig0027178:42815-42834 | Msa1432810:CDS | 55.0% | |
| ATTGAGAATCGCAGACGGCC+CGG | + | tig0027178:42851-42870 | Msa1432810:CDS | 55.0% | |
| ! | TACCCAAGTGGACTTCGTCC+GGG | - | tig0027178:42872-42891 | None:intergenic | 55.0% |
| ! | GTACCCAAGTGGACTTCGTC+CGG | - | tig0027178:42873-42892 | None:intergenic | 55.0% |
| AGGGTTTGGCGCCACAGAGT+AGG | + | tig0027178:36902-36921 | Msa1432810:intron | 60.0% | |
| ! | GTTGCTGGTGTTGGAAGCCG+CGG | + | tig0027178:42570-42589 | Msa1432810:CDS | 60.0% |
| AAGCCGCGGACCAGCTTGAT+CGG | + | tig0027178:42584-42603 | Msa1432810:CDS | 60.0% | |
| GCGGACCAGCTTGATCGGTA+TGG | + | tig0027178:42589-42608 | Msa1432810:CDS | 60.0% | |
| CTCATCTGTGGGCAGCTGCT+AGG | + | tig0027178:42826-42845 | Msa1432810:CDS | 60.0% | |
| TGCAGCTGCAGCTGTGGCTG+TGG | + | tig0027178:36816-36835 | Msa1432810:intron | 65.0% | |
| ! | CTAATAGGCGCTGCCGAGCG+AGG | + | tig0027178:42345-42364 | Msa1432810:CDS | 65.0% |
| CAGCTGCCCACAGATGAGCC+AGG | - | tig0027178:42824-42843 | None:intergenic | 65.0% | |
| GGCCCGGACGAAGTCCACTT+GGG | + | tig0027178:42867-42886 | Msa1432810:CDS | 65.0% | |
| CGGCCCGGACGAAGTCCACT+TGG | + | tig0027178:42866-42885 | Msa1432810:CDS | 70.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| tig0027178 | gene | 35346 | 43216 | 35346 | ID=Msa1432810;Name=Msa1432810 |
| tig0027178 | mRNA | 35346 | 43216 | 35346 | ID=Msa1432810-mRNA-1;Parent=Msa1432810;Name=Msa1432810-mRNA-1;_AED=0.07;_eAED=0.07;_QI=279|0.88|0.83|1|0.88|0.77|18|281|795 |
| tig0027178 | exon | 35346 | 35579 | 35346 | ID=Msa1432810-mRNA-1:exon:8289;Parent=Msa1432810-mRNA-1 |
| tig0027178 | exon | 35609 | 35767 | 35609 | ID=Msa1432810-mRNA-1:exon:8290;Parent=Msa1432810-mRNA-1 |
| tig0027178 | exon | 35882 | 36019 | 35882 | ID=Msa1432810-mRNA-1:exon:8291;Parent=Msa1432810-mRNA-1 |
| tig0027178 | exon | 36501 | 36641 | 36501 | ID=Msa1432810-mRNA-1:exon:8292;Parent=Msa1432810-mRNA-1 |
| tig0027178 | exon | 36919 | 37035 | 36919 | ID=Msa1432810-mRNA-1:exon:8293;Parent=Msa1432810-mRNA-1 |
| tig0027178 | exon | 37308 | 37493 | 37308 | ID=Msa1432810-mRNA-1:exon:8294;Parent=Msa1432810-mRNA-1 |
| tig0027178 | exon | 37756 | 37833 | 37756 | ID=Msa1432810-mRNA-1:exon:8295;Parent=Msa1432810-mRNA-1 |
| tig0027178 | exon | 38065 | 38178 | 38065 | ID=Msa1432810-mRNA-1:exon:8296;Parent=Msa1432810-mRNA-1 |
| tig0027178 | exon | 38260 | 38337 | 38260 | ID=Msa1432810-mRNA-1:exon:8297;Parent=Msa1432810-mRNA-1 |
| tig0027178 | exon | 38714 | 38810 | 38714 | ID=Msa1432810-mRNA-1:exon:8298;Parent=Msa1432810-mRNA-1 |
| tig0027178 | exon | 38923 | 39158 | 38923 | ID=Msa1432810-mRNA-1:exon:8299;Parent=Msa1432810-mRNA-1 |
| tig0027178 | exon | 40199 | 40393 | 40199 | ID=Msa1432810-mRNA-1:exon:8300;Parent=Msa1432810-mRNA-1 |
| tig0027178 | exon | 40497 | 40639 | 40497 | ID=Msa1432810-mRNA-1:exon:8301;Parent=Msa1432810-mRNA-1 |
| tig0027178 | exon | 41120 | 41204 | 41120 | ID=Msa1432810-mRNA-1:exon:8302;Parent=Msa1432810-mRNA-1 |
| tig0027178 | exon | 41300 | 41509 | 41300 | ID=Msa1432810-mRNA-1:exon:8303;Parent=Msa1432810-mRNA-1 |
| tig0027178 | exon | 42306 | 42458 | 42306 | ID=Msa1432810-mRNA-1:exon:8304;Parent=Msa1432810-mRNA-1 |
| tig0027178 | exon | 42544 | 42648 | 42544 | ID=Msa1432810-mRNA-1:exon:8305;Parent=Msa1432810-mRNA-1 |
| tig0027178 | exon | 42738 | 43216 | 42738 | ID=Msa1432810-mRNA-1:exon:8306;Parent=Msa1432810-mRNA-1 |
| tig0027178 | five_prime_UTR | 35346 | 35579 | 35346 | ID=Msa1432810-mRNA-1:five_prime_utr;Parent=Msa1432810-mRNA-1 |
| tig0027178 | five_prime_UTR | 35609 | 35653 | 35609 | ID=Msa1432810-mRNA-1:five_prime_utr;Parent=Msa1432810-mRNA-1 |
| tig0027178 | CDS | 35654 | 35767 | 35654 | ID=Msa1432810-mRNA-1:cds;Parent=Msa1432810-mRNA-1 |
| tig0027178 | CDS | 35882 | 36019 | 35882 | ID=Msa1432810-mRNA-1:cds;Parent=Msa1432810-mRNA-1 |
| tig0027178 | CDS | 36501 | 36641 | 36501 | ID=Msa1432810-mRNA-1:cds;Parent=Msa1432810-mRNA-1 |
| tig0027178 | CDS | 36919 | 37035 | 36919 | ID=Msa1432810-mRNA-1:cds;Parent=Msa1432810-mRNA-1 |
| tig0027178 | CDS | 37308 | 37493 | 37308 | ID=Msa1432810-mRNA-1:cds;Parent=Msa1432810-mRNA-1 |
| tig0027178 | CDS | 37756 | 37833 | 37756 | ID=Msa1432810-mRNA-1:cds;Parent=Msa1432810-mRNA-1 |
| tig0027178 | CDS | 38065 | 38178 | 38065 | ID=Msa1432810-mRNA-1:cds;Parent=Msa1432810-mRNA-1 |
| tig0027178 | CDS | 38260 | 38337 | 38260 | ID=Msa1432810-mRNA-1:cds;Parent=Msa1432810-mRNA-1 |
| tig0027178 | CDS | 38714 | 38810 | 38714 | ID=Msa1432810-mRNA-1:cds;Parent=Msa1432810-mRNA-1 |
| tig0027178 | CDS | 38923 | 39158 | 38923 | ID=Msa1432810-mRNA-1:cds;Parent=Msa1432810-mRNA-1 |
| tig0027178 | CDS | 40199 | 40393 | 40199 | ID=Msa1432810-mRNA-1:cds;Parent=Msa1432810-mRNA-1 |
| tig0027178 | CDS | 40497 | 40639 | 40497 | ID=Msa1432810-mRNA-1:cds;Parent=Msa1432810-mRNA-1 |
| tig0027178 | CDS | 41120 | 41204 | 41120 | ID=Msa1432810-mRNA-1:cds;Parent=Msa1432810-mRNA-1 |
| tig0027178 | CDS | 41300 | 41509 | 41300 | ID=Msa1432810-mRNA-1:cds;Parent=Msa1432810-mRNA-1 |
| tig0027178 | CDS | 42306 | 42458 | 42306 | ID=Msa1432810-mRNA-1:cds;Parent=Msa1432810-mRNA-1 |
| tig0027178 | CDS | 42544 | 42648 | 42544 | ID=Msa1432810-mRNA-1:cds;Parent=Msa1432810-mRNA-1 |
| tig0027178 | CDS | 42738 | 42935 | 42738 | ID=Msa1432810-mRNA-1:cds;Parent=Msa1432810-mRNA-1 |
| tig0027178 | three_prime_UTR | 42936 | 43216 | 42936 | ID=Msa1432810-mRNA-1:three_prime_utr;Parent=Msa1432810-mRNA-1 |
| Gene Sequence |
| Protein sequence |
