Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1435290 | XP_013451388.1 | 96.690 | 725 | 5 | 3 | 1 | 707 | 1 | 724 | 0.0 | 1407 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1435290 | sp|Q94BP7|AUG6_ARATH | 67.957 | 749 | 190 | 13 | 1 | 707 | 1 | 741 | 0.0 | 934 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1435290 | A0A072U8L1 | 96.690 | 725 | 5 | 3 | 1 | 707 | 1 | 724 | 0.0 | 1407 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa1435290 | Msa1460880 | 0.880134 | 7.049883e-70 | -8.615850e-47 |
| Msa0430230 | Msa1435290 | 0.803046 | 4.201903e-49 | -8.615850e-47 |
| Msa0249850 | Msa1435290 | 0.807419 | 5.101830e-50 | -8.615850e-47 |
| Msa0301520 | Msa1435290 | 0.805450 | 1.326896e-49 | -8.615850e-47 |
| Msa0339020 | Msa1435290 | 0.804973 | 1.670241e-49 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1435290 | MtrunA17_Chr6g0458901 | 96.690 | 725 | 5 | 3 | 1 | 707 | 1 | 724 | 0.0 | 1407 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1435290 | AT5G40740.1 | 67.957 | 749 | 190 | 13 | 1 | 707 | 1 | 741 | 0.0 | 934 |
Find 165 sgRNAs with CRISPR-Local
Find 566 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| CCAGATGAAGTGATTGTTTA+TGG | 0.084032 | tig0027684:+17612 | None:intergenic |
| TCGTATTCTGACAATGTAAA+TGG | 0.134109 | tig0027684:-14374 | Msa1435290:CDS |
| AGCAACTGTTCTCCTAATTT+AGG | 0.165566 | tig0027684:+21591 | None:intergenic |
| CGTCATTCCAACCCTAAATT+AGG | 0.205234 | tig0027684:-21603 | Msa1435290:CDS |
| CTTAAGAAATAAAGTTAAAT+TGG | 0.212850 | tig0027684:-18214 | Msa1435290:CDS |
| TTCAGATATGTTGAGTGATA+TGG | 0.229667 | tig0027684:-14405 | Msa1435290:CDS |
| TTTCTAAGGCTACTCGTCTA+TGG | 0.240376 | tig0027684:-18137 | Msa1435290:CDS |
| GCAGGCTATGTGGTCTAATT+TGG | 0.242822 | tig0027684:-18441 | Msa1435290:CDS |
| GAGTAGCCTTAGAAACTAAA+TGG | 0.258741 | tig0027684:+18145 | None:intergenic |
| GCAACTGTTCTCCTAATTTA+GGG | 0.260315 | tig0027684:+21592 | None:intergenic |
| TCTTTCTGTTAGTAAATCTT+TGG | 0.270475 | tig0027684:-15684 | Msa1435290:CDS |
| TATACGAATTGTTTGTTGTT+AGG | 0.271466 | tig0027684:-21687 | Msa1435290:CDS |
| TTACTGACCTCTTCAAATTC+TGG | 0.277246 | tig0027684:+14663 | None:intergenic |
| GAATTCCCATTTAGTTTCTA+AGG | 0.282446 | tig0027684:-18151 | Msa1435290:CDS |
| TTTAGCATGACCCCATCTTC+TGG | 0.297372 | tig0027684:-15767 | Msa1435290:CDS |
| CCTTATTCAGATGTATTATC+TGG | 0.303449 | tig0027684:-17803 | Msa1435290:CDS |
| ATCATCAATACCTTTGTAAC+TGG | 0.311875 | tig0027684:+19149 | None:intergenic |
| GAAACCCTCGAATTGCTTCT+AGG | 0.319495 | tig0027684:+20332 | None:intergenic |
| GCAACACTTGGCTAGCTTCC+AGG | 0.335028 | tig0027684:-17261 | Msa1435290:intron |
| TTTCTCACCACCCATGCTAA+TGG | 0.343375 | tig0027684:-14273 | Msa1435290:CDS |
| GATATGGACTTCTGAATTGT+TGG | 0.351406 | tig0027684:+16116 | None:intergenic |
| TAACAGAAAGATTCTCTGTT+TGG | 0.354609 | tig0027684:+15696 | None:intergenic |
| TGTGCACTACGCAATATATC+TGG | 0.373608 | tig0027684:+17341 | None:intergenic |
| CCAGATAATACATCTGAATA+AGG | 0.383601 | tig0027684:+17803 | None:intergenic |
| TTGTTGTCTGTTTGCACTGA+AGG | 0.388031 | tig0027684:+17764 | None:intergenic |
| GGTTTGGATCCATCGGTTAT+TGG | 0.388081 | tig0027684:-21666 | Msa1435290:CDS |
| CAACACGAAGTTCTTGCATC+AGG | 0.388473 | tig0027684:-17997 | Msa1435290:CDS |
| TCCTCCCACTGCTCTGTGCT+TGG | 0.391586 | tig0027684:+16006 | None:intergenic |
| CTTGCTACTTCATTATTTGA+AGG | 0.392697 | tig0027684:+15656 | None:intergenic |
| GAATTGTTTGTTGTTAGGTT+TGG | 0.393697 | tig0027684:-21682 | Msa1435290:CDS |
| CAATAGATGTGGAGTTAGAT+TGG | 0.394612 | tig0027684:+16061 | None:intergenic |
| GACACGACACTCTTGTATCT+TGG | 0.396590 | tig0027684:-13307 | Msa1435290:three_prime_UTR |
| ATATGGACTTCTGAATTGTT+GGG | 0.399785 | tig0027684:+16117 | None:intergenic |
| TGATCAGTTTGAAGACTTGC+TGG | 0.400080 | tig0027684:-14234 | Msa1435290:CDS |
| GAGAAAAGCTAGTCTCTGAT+AGG | 0.405446 | tig0027684:+14549 | None:intergenic |
| ATCGGATGTTTCATTTGAAC+CGG | 0.413158 | tig0027684:+14337 | None:intergenic |
| GGCTTATTTACAACAAGAGT+TGG | 0.415735 | tig0027684:-18250 | Msa1435290:CDS |
| GATGTATTATCTGGTGACTC+TGG | 0.426370 | tig0027684:-17794 | Msa1435290:CDS |
| GAGTCATGCATCAGATGAAC+AGG | 0.427425 | tig0027684:-14447 | Msa1435290:CDS |
| TCGACATAGCAGAAGTTATA+CGG | 0.429647 | tig0027684:-17661 | Msa1435290:CDS |
| ACCCCATCTTCTGGAAAAGC+TGG | 0.430284 | tig0027684:-15758 | Msa1435290:CDS |
| ATCATCTCTGCTTGCAGCAA+TGG | 0.433791 | tig0027684:-17843 | Msa1435290:CDS |
| ACAACAGTGGATGACAGAAA+TGG | 0.435162 | tig0027684:-17701 | Msa1435290:CDS |
| CCATAAACAATCACTTCATC+TGG | 0.439575 | tig0027684:-17612 | Msa1435290:intron |
| TGTGCACATTGACTGATTAG+TGG | 0.439728 | tig0027684:-13181 | Msa1435290:three_prime_UTR |
| TTTAATATTATTCAGGAAAG+TGG | 0.440808 | tig0027684:-15884 | Msa1435290:intron |
| CGTATTCTGACAATGTAAAT+GGG | 0.446947 | tig0027684:-14373 | Msa1435290:CDS |
| GATCCATCGGTTATTGGAGT+TGG | 0.448342 | tig0027684:-21660 | Msa1435290:CDS |
| TGAGCTATCAAGTCTTCAAT+AGG | 0.448471 | tig0027684:+17973 | None:intergenic |
| CTTCTGCTATGTCGACAGTT+TGG | 0.451412 | tig0027684:+17669 | None:intergenic |
| CAGTGCAAACAGACAACAAA+GGG | 0.452160 | tig0027684:-17760 | Msa1435290:CDS |
| GTCATCACCTTCTTCTCATA+CGG | 0.456768 | tig0027684:+21756 | None:intergenic |
| TTCAAAACCGTATGAGAAGA+AGG | 0.459620 | tig0027684:-21763 | Msa1435290:five_prime_UTR |
| ATGTATTATCTGGTGACTCT+GGG | 0.464027 | tig0027684:-17793 | Msa1435290:CDS |
| AGAAAGATTCTCTGTTTGGC+TGG | 0.464368 | tig0027684:+15700 | None:intergenic |
| TGAAGACTTGATAGCTCATC+GGG | 0.467705 | tig0027684:-17968 | Msa1435290:CDS |
| CAACAGTGGATGACAGAAAT+GGG | 0.469316 | tig0027684:-17700 | Msa1435290:CDS |
| TCTTCGCTTGCTACTTGTTG+TGG | 0.469798 | tig0027684:-20311 | Msa1435290:CDS |
| CTTGGATAGGTGATGTTGAC+TGG | 0.474209 | tig0027684:+16024 | None:intergenic |
| GACAACAAAGGGGAGATTGA+TGG | 0.475380 | tig0027684:-17749 | Msa1435290:CDS |
| TAACTTCATTGAGGAGCAAA+AGG | 0.479123 | tig0027684:-14505 | Msa1435290:CDS |
| CACCAAACCATATTCAGAAA+AGG | 0.480336 | tig0027684:+13217 | None:intergenic |
| TTGCTACTTGTTGTGGACCT+AGG | 0.481963 | tig0027684:-20304 | Msa1435290:intron |
| TGCTGATTCTTACACGGCGG+AGG | 0.483016 | tig0027684:+21857 | None:intergenic |
| AGAAATAAAGTTAAATTGGA+AGG | 0.485157 | tig0027684:-18210 | Msa1435290:CDS |
| ACGGTCAATGTTTGACTTCG+AGG | 0.489198 | tig0027684:-14309 | Msa1435290:CDS |
| AATAAGGAGCCTGGGAACTC+TGG | 0.489763 | tig0027684:+17819 | None:intergenic |
| TACTGATGATGTTGGTGAGT+TGG | 0.491187 | tig0027684:-15861 | Msa1435290:CDS |
| TTCTAAGGCTACTCGTCTAT+GGG | 0.504439 | tig0027684:-18136 | Msa1435290:CDS |
| ATACATCTGAATAAGGAGCC+TGG | 0.504604 | tig0027684:+17810 | None:intergenic |
| AAGGTTATTTGTATCTCCAA+TGG | 0.505628 | tig0027684:-14486 | Msa1435290:CDS |
| GTTGTTAGGTTTGGATCCAT+CGG | 0.507053 | tig0027684:-21673 | Msa1435290:CDS |
| GATCTTGTAGGATTTCGATA+AGG | 0.507445 | tig0027684:-21430 | Msa1435290:intron |
| AGATATATTGCGTAGTGCAC+AGG | 0.507579 | tig0027684:-17339 | Msa1435290:CDS |
| AATGGGTTTCTCTCATATAC+CGG | 0.507875 | tig0027684:-14356 | Msa1435290:CDS |
| TGTCATTTCAGAGGCTGCCC+AGG | 0.510793 | tig0027684:+13390 | None:intergenic |
| AGTAGCCTTAGAAACTAAAT+GGG | 0.511302 | tig0027684:+18146 | None:intergenic |
| CCACTGCTCTGTGCTTGGAT+AGG | 0.512315 | tig0027684:+16011 | None:intergenic |
| AAACATTGACCGTCGTGCAT+CGG | 0.512464 | tig0027684:+14319 | None:intergenic |
| AGTGTTGCTGATGCTCTGCA+AGG | 0.515631 | tig0027684:+17276 | None:intergenic |
| CTGTTCTCCTAATTTAGGGT+TGG | 0.516338 | tig0027684:+21596 | None:intergenic |
| TTAAATTGGAAGGAGAACTC+TGG | 0.520800 | tig0027684:-18200 | Msa1435290:CDS |
| GAAAAGCTAGTCTCTGATAG+GGG | 0.521418 | tig0027684:+14551 | None:intergenic |
| CACTTCCTAGAAGCAATTCG+AGG | 0.523420 | tig0027684:-20337 | Msa1435290:CDS |
| CAAGAATAGCCCTTGAAAGA+AGG | 0.526000 | tig0027684:-18499 | Msa1435290:CDS |
| AGAAAAGCTAGTCTCTGATA+GGG | 0.528814 | tig0027684:+14550 | None:intergenic |
| TACATCTGAATAAGGAGCCT+GGG | 0.531473 | tig0027684:+17811 | None:intergenic |
| GGCAAAAGCAAATGATGGAG+AGG | 0.532581 | tig0027684:-17366 | Msa1435290:CDS |
| TTCATTCTCTCTTCTCTCAG+AGG | 0.536778 | tig0027684:-21564 | Msa1435290:CDS |
| AGTCAATGTGCACAAAGCAC+TGG | 0.537004 | tig0027684:+13190 | None:intergenic |
| TAAATTGGAAGGAGAACTCT+GGG | 0.537321 | tig0027684:-18199 | Msa1435290:CDS |
| GCAGAGATGATCCAGAGATT+CGG | 0.538579 | tig0027684:+17855 | None:intergenic |
| AGCACAGAGCAGTGGGAGGA+TGG | 0.538880 | tig0027684:-16003 | Msa1435290:intron |
| TCAGTCAATGGTGTAGGCAA+TGG | 0.542136 | tig0027684:+19203 | None:intergenic |
| TTGGGGCAACGTCTTTGAGT+TGG | 0.543115 | tig0027684:+16135 | None:intergenic |
| CTGCAGGCAAAAGCAAATGA+TGG | 0.545593 | tig0027684:-17371 | Msa1435290:intron |
| TGCAGAGCATCAGCAACACT+TGG | 0.546152 | tig0027684:-17273 | Msa1435290:CDS |
| AGAAATGGCTGTACAACGGC+AGG | 0.547477 | tig0027684:-18459 | Msa1435290:CDS |
| GCTCAGAACTTCCGTCAGAA+TGG | 0.551471 | tig0027684:+14585 | None:intergenic |
| GATCAGTTTGAAGACTTGCT+GGG | 0.553408 | tig0027684:-14233 | Msa1435290:intron |
| TCAAGCAAAGGATCGTCCAT+TGG | 0.556519 | tig0027684:+14470 | None:intergenic |
| TTGAAGACTTGATAGCTCAT+CGG | 0.558421 | tig0027684:-17969 | Msa1435290:CDS |
| TGATAGCTCATCGGGAACAT+AGG | 0.563175 | tig0027684:-17960 | Msa1435290:intron |
| CTGTACAACGGCAGGCTATG+TGG | 0.563872 | tig0027684:-18451 | Msa1435290:CDS |
| TTCGTTGCATGCTTTGCGAG+AGG | 0.564868 | tig0027684:-19264 | Msa1435290:CDS |
| ATGATTTGCTGATTCTTACA+CGG | 0.568361 | tig0027684:+21851 | None:intergenic |
| GTCTAATGTTCAGCTTGACA+AGG | 0.569976 | tig0027684:-15828 | Msa1435290:CDS |
| AAGTGACGAGTCCATTAGCA+TGG | 0.570403 | tig0027684:+14262 | None:intergenic |
| TAGCAGAAGTTATACGGCGT+TGG | 0.571529 | tig0027684:-17655 | Msa1435290:CDS |
| GTGTTGCTGATGCTCTGCAA+GGG | 0.575027 | tig0027684:+17277 | None:intergenic |
| TCGTGGGTTATGCGCTGAAG+AGG | 0.577434 | tig0027684:-18396 | Msa1435290:intron |
| CATACAATTTAGAATCATCT+CGG | 0.580767 | tig0027684:-14616 | Msa1435290:CDS |
| AACACGAAGTTCTTGCATCA+GGG | 0.582629 | tig0027684:-17996 | Msa1435290:CDS |
| ATTAGTGAGCTTGAGTCGCA+AGG | 0.584697 | tig0027684:-20362 | Msa1435290:CDS |
| AAATGACATGATTGATGCAG+TGG | 0.585862 | tig0027684:-13375 | Msa1435290:three_prime_UTR |
| AGCAATGGACCAGAGTTCCC+AGG | 0.591813 | tig0027684:-17828 | Msa1435290:CDS |
| CATCAATCATGTCATTTCAG+AGG | 0.592739 | tig0027684:+13381 | None:intergenic |
| GCTACATCAGTCAATGGTGT+AGG | 0.593033 | tig0027684:+19197 | None:intergenic |
| CTATCCAAGCACAGAGCAGT+GGG | 0.596823 | tig0027684:-16010 | Msa1435290:CDS |
| GGAAATGTGCAAAGGCGGCA+TGG | 0.602198 | tig0027684:-15737 | Msa1435290:CDS |
| TGATGTCTGTTCAATAGATG+TGG | 0.605141 | tig0027684:+16050 | None:intergenic |
| GCACAGGAAGGCAGTTCAAG+TGG | 0.607060 | tig0027684:-17323 | Msa1435290:CDS |
| TAGATGTGGAGTTAGATTGG+AGG | 0.607973 | tig0027684:+16064 | None:intergenic |
| TCGAATTCAACTCCTCGTGT+TGG | 0.609098 | tig0027684:-21633 | Msa1435290:CDS |
| GATGCATGACTCTCAAGCAA+AGG | 0.610314 | tig0027684:+14458 | None:intergenic |
| TGTTTGTCCAGAATTTGAAG+AGG | 0.610613 | tig0027684:-14670 | Msa1435290:CDS |
| TACTCTACTTCCAGTTACAA+AGG | 0.612956 | tig0027684:-19159 | Msa1435290:intron |
| ACTTCCTAGAAGCAATTCGA+GGG | 0.613484 | tig0027684:-20336 | Msa1435290:CDS |
| TCATCGACGGACATTTACTT+CGG | 0.615640 | tig0027684:-19240 | Msa1435290:CDS |
| CCTATCCAAGCACAGAGCAG+TGG | 0.620587 | tig0027684:-16011 | Msa1435290:CDS |
| GACGAGTCCATTAGCATGGG+TGG | 0.621953 | tig0027684:+14266 | None:intergenic |
| ATATGTTGAGTGATATGGAA+AGG | 0.622645 | tig0027684:-14400 | Msa1435290:CDS |
| AAATGACTGCTGAATTTCGT+GGG | 0.627185 | tig0027684:-18412 | Msa1435290:CDS |
| GCTCCAACTCCAATAACCGA+TGG | 0.628118 | tig0027684:+21657 | None:intergenic |
| GAGAATGCTACATCAGTCAA+TGG | 0.628328 | tig0027684:+19191 | None:intergenic |
| TTGCTGCTAAAGACTCGGCA+TGG | 0.629858 | tig0027684:+17300 | None:intergenic |
| GAAATGACTGCTGAATTTCG+TGG | 0.630062 | tig0027684:-18413 | Msa1435290:CDS |
| AGATAATGAGATGTGAAATG+TGG | 0.631846 | tig0027684:+21884 | None:intergenic |
| AAGCTGGAAATGTGCAAAGG+CGG | 0.635206 | tig0027684:-15742 | Msa1435290:CDS |
| TGTCGTGTCATACAACGTGA+AGG | 0.636706 | tig0027684:+13321 | None:intergenic |
| TATGGACTTCTGAATTGTTG+GGG | 0.637998 | tig0027684:+16118 | None:intergenic |
| CGGAATAGTAGCCATTCTGA+CGG | 0.638325 | tig0027684:-14596 | Msa1435290:CDS |
| GTCGTGTCATACAACGTGAA+GGG | 0.644151 | tig0027684:+13322 | None:intergenic |
| AGTGACGAGTCCATTAGCAT+GGG | 0.648746 | tig0027684:+14263 | None:intergenic |
| GCCGTGTCGGTCTCTGAGAG+TGG | 0.649363 | tig0027684:+13435 | None:intergenic |
| TGAGAAGAAGGTGATGACGA+TGG | 0.654702 | tig0027684:-21751 | Msa1435290:exon |
| GCAAAAGCAAATGATGGAGA+GGG | 0.656393 | tig0027684:-17365 | Msa1435290:CDS |
| ATGGTCTATCAATGCCGTGT+CGG | 0.659451 | tig0027684:+13422 | None:intergenic |
| GAAAAGCTGGAAATGTGCAA+AGG | 0.664998 | tig0027684:-15745 | Msa1435290:CDS |
| AAAAGCTAGTCTCTGATAGG+GGG | 0.665997 | tig0027684:+14552 | None:intergenic |
| TGTATTATCTGGTGACTCTG+GGG | 0.667191 | tig0027684:-17792 | Msa1435290:CDS |
| GAAAGTGGTACTGATGATGT+TGG | 0.668310 | tig0027684:-15869 | Msa1435290:CDS |
| ATGAAACATCCGATGCACGA+CGG | 0.669917 | tig0027684:-14328 | Msa1435290:CDS |
| ATGCAGAAATGGCTGTACAA+CGG | 0.671114 | tig0027684:-18463 | Msa1435290:CDS |
| AAGGGTTGCTGCTAAAGACT+CGG | 0.676383 | tig0027684:+17295 | None:intergenic |
| TCAGTGCAAACAGACAACAA+AGG | 0.677596 | tig0027684:-17761 | Msa1435290:CDS |
| TCCAAGCACAGAGCAGTGGG+AGG | 0.679082 | tig0027684:-16007 | Msa1435290:CDS |
| CAGTGAGACATTGACAACAG+TGG | 0.682842 | tig0027684:-17714 | Msa1435290:CDS |
| TGACGAAATGCACCAACACG+AGG | 0.689545 | tig0027684:+21621 | None:intergenic |
| GGGGTCATGCTAAATAACTG+AGG | 0.693513 | tig0027684:+15776 | None:intergenic |
| ACCACTCTCAGAGACCGACA+CGG | 0.698385 | tig0027684:-13436 | Msa1435290:CDS |
| ATATTGCGTAGTGCACAGGA+AGG | 0.709357 | tig0027684:-17335 | Msa1435290:CDS |
| CTTTGCGAGAGGTTCATCGA+CGG | 0.712815 | tig0027684:-19253 | Msa1435290:CDS |
| AGTGCAAACAGACAACAAAG+GGG | 0.761282 | tig0027684:-17759 | Msa1435290:CDS |
| ATTTGCTGATTCTTACACGG+CGG | 0.762268 | tig0027684:+21854 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | ATTATATTATATTTTTTAAT+TGG | - | tig0027684:16572-16591 | Msa1435290:intron | 0.0% |
| !!! | TTTTGTTTTTATATTAGAAT+CGG | - | tig0027684:15764-15783 | Msa1435290:CDS | 10.0% |
| !!! | AAAATGAATTATTTTACTTT+GGG | + | tig0027684:16235-16254 | None:intergenic | 10.0% |
| !! | ACAAAAATAATTATAATATC+AGG | - | tig0027684:18398-18417 | Msa1435290:CDS | 10.0% |
| !! | AAACAACTTAATTAATATTT+AGG | - | tig0027684:18430-18449 | Msa1435290:CDS | 10.0% |
| !!! | TATCAATTTTAATATTATTC+AGG | - | tig0027684:19277-19296 | Msa1435290:CDS | 10.0% |
| !!! | TTTAAATTATATTTTAGCAA+AGG | - | tig0027684:19728-19747 | Msa1435290:intron | 10.0% |
| !!! | TTAAATTATATTTTAGCAAA+GGG | - | tig0027684:19729-19748 | Msa1435290:intron | 10.0% |
| !! | ATACCAAAAAATAAAATAAA+GGG | + | tig0027684:19926-19945 | None:intergenic | 10.0% |
| !! | AATACCAAAAAATAAAATAA+AGG | + | tig0027684:19927-19946 | None:intergenic | 10.0% |
| !!! | GGAAAAATAAGTTTTATTTA+GGG | - | tig0027684:14976-14995 | Msa1435290:intron | 15.0% |
| !!! | GAAAAATAAGTTTTATTTAG+GGG | - | tig0027684:14977-14996 | Msa1435290:intron | 15.0% |
| !! | AACACTAATAAATTGAAAAA+AGG | + | tig0027684:15007-15026 | None:intergenic | 15.0% |
| !! | TTATTAGTATTGTATATTGT+TGG | - | tig0027684:15025-15044 | Msa1435290:intron | 15.0% |
| !!! | CAAAATGAATTATTTTACTT+TGG | + | tig0027684:16236-16255 | None:intergenic | 15.0% |
| !! | ATAAAATGACAAATAATTTG+AGG | - | tig0027684:16384-16403 | Msa1435290:intron | 15.0% |
| !! | CTTAAGAAATAAAGTTAAAT+TGG | - | tig0027684:16954-16973 | Msa1435290:intron | 15.0% |
| !! | TTAATTAATATTTAGGTGTT+TGG | - | tig0027684:18437-18456 | Msa1435290:CDS | 15.0% |
| !! | TAATTAATATTTAGGTGTTT+GGG | - | tig0027684:18438-18457 | Msa1435290:CDS | 15.0% |
| !! | CAAAAGCTAAATATTAATTA+AGG | + | tig0027684:18526-18545 | None:intergenic | 15.0% |
| !!! | AATTAATATTTAGCTTTTGA+AGG | - | tig0027684:18527-18546 | Msa1435290:intron | 15.0% |
| !! | GACAATATATCAATATTTAT+CGG | + | tig0027684:18674-18693 | None:intergenic | 15.0% |
| !!! | TTTAGGATTTCTAAATTATA+CGG | - | tig0027684:18826-18845 | Msa1435290:intron | 15.0% |
| !!! | TTTAGGATTTCTAAATTATA+CGG | - | tig0027684:18826-18845 | Msa1435290:intron | 15.0% |
| !!! | TTTTGTTTTCATGATTTTTT+AGG | - | tig0027684:19548-19567 | Msa1435290:intron | 15.0% |
| !! | ATTATAAAAAATGGATATTG+AGG | + | tig0027684:19705-19724 | None:intergenic | 15.0% |
| !!! | TAAATTATATTTTAGCAAAG+GGG | - | tig0027684:19730-19749 | Msa1435290:intron | 15.0% |
| !! | TTAGTAATAAATAAAGGAAA+GGG | + | tig0027684:20245-20264 | None:intergenic | 15.0% |
| !! | TTTAGTAATAAATAAAGGAA+AGG | + | tig0027684:20246-20265 | None:intergenic | 15.0% |
| !!! | TTCAAAAATGGTATTTTTTT+GGG | - | tig0027684:21040-21059 | Msa1435290:intron | 15.0% |
| !!! | AATACTTTTGAAGATTGAAT+TGG | + | tig0027684:13631-13650 | None:intergenic | 20.0% |
| !!! | GTTTAACTTGTTTTTTTGTT+TGG | - | tig0027684:13716-13735 | Msa1435290:intron | 20.0% |
| !!! | TGATTATGTAAAATTGATTC+TGG | - | tig0027684:13853-13872 | Msa1435290:intron | 20.0% |
| !!! | AAAATTGATTCTGATATGTT+TGG | - | tig0027684:14001-14020 | Msa1435290:intron | 20.0% |
| !! | AATATAAAGTGATGCATATT+TGG | + | tig0027684:14287-14306 | None:intergenic | 20.0% |
| !!! | TTATATTCAACTCACTTTTA+AGG | - | tig0027684:14300-14319 | Msa1435290:CDS | 20.0% |
| !!! | TATATTCAACTCACTTTTAA+GGG | - | tig0027684:14301-14320 | Msa1435290:CDS | 20.0% |
| !! | AATTAGAACTTATGATTTCT+AGG | - | tig0027684:14400-14419 | Msa1435290:CDS | 20.0% |
| !! | TTAAACTTTAAGTGTATGTT+TGG | + | tig0027684:14519-14538 | None:intergenic | 20.0% |
| !!! | AAATGTTTTTAATGATCTGA+CGG | - | tig0027684:14630-14649 | Msa1435290:CDS | 20.0% |
| !! | TTCACAACAGAATAAAAAAA+TGG | + | tig0027684:14710-14729 | None:intergenic | 20.0% |
| !!! | AATTGAAATTTGAATGGATT+TGG | - | tig0027684:14728-14747 | Msa1435290:intron | 20.0% |
| !!! | TGTATTTTAGTTCATTGTTT+TGG | - | tig0027684:14954-14973 | Msa1435290:intron | 20.0% |
| !!! | GTATTTTAGTTCATTGTTTT+GGG | - | tig0027684:14955-14974 | Msa1435290:intron | 20.0% |
| !!! | GGGAAAAATAAGTTTTATTT+AGG | - | tig0027684:14975-14994 | Msa1435290:intron | 20.0% |
| !!! | CCATATTTTTCTTAGATAAT+AGG | + | tig0027684:15517-15536 | None:intergenic | 20.0% |
| !! | CCTATTATCTAAGAAAAATA+TGG | - | tig0027684:15514-15533 | Msa1435290:intron | 20.0% |
| !! | TTAGAACTAAATCCTTTAAA+TGG | + | tig0027684:15678-15697 | None:intergenic | 20.0% |
| !!! | TTAAAGGATTTAGTTCTAAA+TGG | - | tig0027684:15679-15698 | Msa1435290:CDS | 20.0% |
| !!! | AATCCAATCCATAAAATTTT+AGG | - | tig0027684:16042-16061 | Msa1435290:CDS | 20.0% |
| !!! | TATCCTAAAATTTTATGGAT+TGG | + | tig0027684:16048-16067 | None:intergenic | 20.0% |
| !!! | CATTCTATCCTAAAATTTTA+TGG | + | tig0027684:16053-16072 | None:intergenic | 20.0% |
| !!! | CAAAATAACAGTTATCTTTT+TGG | - | tig0027684:16136-16155 | Msa1435290:CDS | 20.0% |
| !!! | AATTATTTTACTTTGGGAAT+GGG | + | tig0027684:16229-16248 | None:intergenic | 20.0% |
| !! | ACTTGAGATACAAATAAATA+AGG | - | tig0027684:16317-16336 | Msa1435290:intron | 20.0% |
| !! | AAATAAGGATGTTATGTTAT+CGG | - | tig0027684:16332-16351 | Msa1435290:intron | 20.0% |
| !! | GAACTATATGTAAATAAACT+TGG | + | tig0027684:16823-16842 | None:intergenic | 20.0% |
| !! | AGAAATAAAGTTAAATTGGA+AGG | - | tig0027684:16958-16977 | Msa1435290:intron | 20.0% |
| !! | CCTAAAATTTATGTACAAAA+TGG | + | tig0027684:17291-17310 | None:intergenic | 20.0% |
| !!! | CCATTTTGTACATAAATTTT+AGG | - | tig0027684:17288-17307 | Msa1435290:CDS | 20.0% |
| !! | ATGACAAATAGAAAATGAAA+CGG | + | tig0027684:17996-18015 | None:intergenic | 20.0% |
| !! | TAATTATAATATCAGGTGTT+TGG | - | tig0027684:18405-18424 | Msa1435290:CDS | 20.0% |
| !! | AATTATAATATCAGGTGTTT+GGG | - | tig0027684:18406-18425 | Msa1435290:CDS | 20.0% |
| !! | AAGCTAAATATTAATTAAGG+AGG | + | tig0027684:18523-18542 | None:intergenic | 20.0% |
| !! | TTTAATATTATTCAGGAAAG+TGG | - | tig0027684:19284-19303 | Msa1435290:CDS | 20.0% |
| !!! | AAATTATATTTTAGCAAAGG+GGG | - | tig0027684:19731-19750 | Msa1435290:intron | 20.0% |
| !!! | AATTTGTTTATAACAATCTC+TGG | - | tig0027684:20046-20065 | Msa1435290:intron | 20.0% |
| !!! | CTTTTACAATGCATTAAATT+AGG | - | tig0027684:20097-20116 | Msa1435290:intron | 20.0% |
| !!! | CTTCAAAAATGGTATTTTTT+TGG | - | tig0027684:21039-21058 | Msa1435290:intron | 20.0% |
| !!! | TCAAAAATGGTATTTTTTTG+GGG | - | tig0027684:21041-21060 | Msa1435290:intron | 20.0% |
| !!! | GAAATGTTAAAGCAATATTT+TGG | - | tig0027684:21104-21123 | Msa1435290:intron | 20.0% |
| !!! | TATACGAATTGTTTGTTGTT+AGG | - | tig0027684:13481-13500 | Msa1435290:intron | 25.0% |
| !!! | TTTTTTTGTTTGGATCTTGT+AGG | - | tig0027684:13726-13745 | Msa1435290:intron | 25.0% |
| !!! | GTAAGGATTTGTCATTTTTT+TGG | - | tig0027684:13805-13824 | Msa1435290:intron | 25.0% |
| !! | AGTGATTTATGTTTGAAATG+TGG | - | tig0027684:13897-13916 | Msa1435290:intron | 25.0% |
| !!! | AAGTGGTTTATGTTTTGAAT+TGG | - | tig0027684:14035-14054 | Msa1435290:intron | 25.0% |
| !!! | AGTGGTTTATGTTTTGAATT+GGG | - | tig0027684:14036-14055 | Msa1435290:intron | 25.0% |
| !! | TCAAGTAGAATTAATTTTGG+AGG | + | tig0027684:14189-14208 | None:intergenic | 25.0% |
| !! | GCTTCAAGTAGAATTAATTT+TGG | + | tig0027684:14192-14211 | None:intergenic | 25.0% |
| !!! | TTTAGTTTATGTTGGTTCTA+CGG | + | tig0027684:14356-14375 | None:intergenic | 25.0% |
| !! | CACTCAAATTTAGTTTATGT+TGG | + | tig0027684:14364-14383 | None:intergenic | 25.0% |
| !!! | AGAACTGATTTTGATATGTT+TGG | + | tig0027684:14457-14476 | None:intergenic | 25.0% |
| ! | GTTGTGAATTGAAATTTGAA+TGG | - | tig0027684:14722-14741 | Msa1435290:intron | 25.0% |
| ! | AGTCAAAACTAAATCAAACT+AGG | + | tig0027684:15051-15070 | None:intergenic | 25.0% |
| ! | TGGATTATTCAATATTCATG+AGG | - | tig0027684:15427-15446 | Msa1435290:intron | 25.0% |
| ! | TGTGTAAAATAGTTAATCAC+TGG | - | tig0027684:15545-15564 | Msa1435290:intron | 25.0% |
| ! | CATTAAGTGAAACCATTTAA+AGG | - | tig0027684:15663-15682 | Msa1435290:CDS | 25.0% |
| !! | AAAATAGAAATCTTTTCCCA+AGG | + | tig0027684:15747-15766 | None:intergenic | 25.0% |
| ! | TTGAATGTTCATGTTAATGT+AGG | - | tig0027684:15858-15877 | Msa1435290:CDS | 25.0% |
| ! | AAACAACACTTAATATGAGA+TGG | + | tig0027684:16168-16187 | None:intergenic | 25.0% |
| !!! | CTCATATTAAGTGTTGTTTA+AGG | - | tig0027684:16169-16188 | Msa1435290:intron | 25.0% |
| !!! | GAATTATTTTACTTTGGGAA+TGG | + | tig0027684:16230-16249 | None:intergenic | 25.0% |
| ! | AATAAGGATGTTATGTTATC+GGG | - | tig0027684:16333-16352 | Msa1435290:intron | 25.0% |
| ! | TAAAAACTTCCTTCTTTCAA+GGG | + | tig0027684:16681-16700 | None:intergenic | 25.0% |
| !!! | GTTTTTAGAAAATGCAGAAA+TGG | - | tig0027684:16694-16713 | Msa1435290:intron | 25.0% |
| ! | ATAATGTAAAACCTGAATTC+AGG | - | tig0027684:16897-16916 | Msa1435290:intron | 25.0% |
| !! | TTTTGTCAATATTAATGTGC+AGG | - | tig0027684:17147-17166 | Msa1435290:intron | 25.0% |
| ! | GTTTACAAATTCTCCTTTAA+AGG | - | tig0027684:17585-17604 | Msa1435290:intron | 25.0% |
| ! | AATAGTGTCAAAAATCATTG+AGG | + | tig0027684:18105-18124 | None:intergenic | 25.0% |
| !! | ACACTATTTAGTTGATCTTT+TGG | - | tig0027684:18117-18136 | Msa1435290:CDS | 25.0% |
| !!! | TGGAAACTTAACTTTTGTTT+TGG | - | tig0027684:18173-18192 | Msa1435290:CDS | 25.0% |
| !!! | GGAAACTTAACTTTTGTTTT+GGG | - | tig0027684:18174-18193 | Msa1435290:CDS | 25.0% |
| !!! | GAAACTTAACTTTTGTTTTG+GGG | - | tig0027684:18175-18194 | Msa1435290:CDS | 25.0% |
| ! | TATAAGAAGCTGTTAACAAA+GGG | + | tig0027684:18352-18371 | None:intergenic | 25.0% |
| ! | ATATAAGAAGCTGTTAACAA+AGG | + | tig0027684:18353-18372 | None:intergenic | 25.0% |
| !!! | TAATATTTAGCTTTTGAAGG+AGG | - | tig0027684:18530-18549 | Msa1435290:intron | 25.0% |
| !!! | AATATTTAGCTTTTGAAGGA+GGG | - | tig0027684:18531-18550 | Msa1435290:intron | 25.0% |
| !!! | TTGATAAGTATCGAATCAAT+CGG | + | tig0027684:18561-18580 | None:intergenic | 25.0% |
| ! | AGTATATGAACAGTAATTAC+AGG | + | tig0027684:18764-18783 | None:intergenic | 25.0% |
| !! | ACATTGTTGCATTTTTCTTT+AGG | - | tig0027684:18809-18828 | Msa1435290:intron | 25.0% |
| ! | AGTATATGAACAGTAATTAC+AGG | + | tig0027684:18764-18783 | None:intergenic | 25.0% |
| !! | ACATTGTTGCATTTTTCTTT+AGG | - | tig0027684:18809-18828 | Msa1435290:intron | 25.0% |
| ! | AGTATATGAACAGTAATTAC+AGG | + | tig0027684:18764-18783 | None:intergenic | 25.0% |
| ! | TCTTTCTGTTAGTAAATCTT+TGG | - | tig0027684:19484-19503 | Msa1435290:intron | 25.0% |
| ! | ATAAAAAATGGATATTGAGG+AGG | + | tig0027684:19702-19721 | None:intergenic | 25.0% |
| !!! | AATTATATTTTAGCAAAGGG+GGG | - | tig0027684:19732-19751 | Msa1435290:intron | 25.0% |
| !!! | CTGCCCTTTATTTTATTTTT+TGG | - | tig0027684:19920-19939 | Msa1435290:intron | 25.0% |
| ! | GTTAGTTATTGAGTGTTTAT+GGG | + | tig0027684:20209-20228 | None:intergenic | 25.0% |
| ! | TTATTGGAGAACAATATAAG+GGG | + | tig0027684:20337-20356 | None:intergenic | 25.0% |
| ! | CTTATTGGAGAACAATATAA+GGG | + | tig0027684:20338-20357 | None:intergenic | 25.0% |
| ! | TCTTATTGGAGAACAATATA+AGG | + | tig0027684:20339-20358 | None:intergenic | 25.0% |
| ! | TTATATTGTTCTCCAATAAG+AGG | - | tig0027684:20338-20357 | Msa1435290:CDS | 25.0% |
| !! | CATACAATTTAGAATCATCT+CGG | - | tig0027684:20552-20571 | Msa1435290:intron | 25.0% |
| ! | AAAAAAACGTAACTTCATTG+AGG | - | tig0027684:20654-20673 | Msa1435290:intron | 25.0% |
| !!! | TAGTTTGAAGATTTTGTTTC+AGG | - | tig0027684:20965-20984 | Msa1435290:intron | 25.0% |
| ! | TTAATTCAGAGCTTCAAAAA+TGG | - | tig0027684:21028-21047 | Msa1435290:intron | 25.0% |
| !!! | CAAAAATGGTATTTTTTTGG+GGG | - | tig0027684:21042-21061 | Msa1435290:intron | 25.0% |
| ! | ATAAGTTGTTAATCCAAACA+GGG | + | tig0027684:21153-21172 | None:intergenic | 25.0% |
| ! | AATAAGTTGTTAATCCAAAC+AGG | + | tig0027684:21154-21173 | None:intergenic | 25.0% |
| ! | TCAAACTAGAATAAGGATAT+TGG | - | tig0027684:21511-21530 | Msa1435290:intron | 25.0% |
| !! | TCCAAAATTCTGAAAAATCT+AGG | - | tig0027684:21561-21580 | Msa1435290:CDS | 25.0% |
| !! | CCAAAATTCTGAAAAATCTA+GGG | - | tig0027684:21562-21581 | Msa1435290:CDS | 25.0% |
| !! | CAAAATTCTGAAAAATCTAG+GGG | - | tig0027684:21563-21582 | Msa1435290:CDS | 25.0% |
| !!! | AAAAATCTAGGGGTTATTTT+TGG | - | tig0027684:21573-21592 | Msa1435290:CDS | 25.0% |
| AGATAATGAGATGTGAAATG+TGG | + | tig0027684:13287-13306 | None:intergenic | 30.0% | |
| !! | ATGATTTGCTGATTCTTACA+CGG | + | tig0027684:13320-13339 | None:intergenic | 30.0% |
| !! | GAATTGTTTGTTGTTAGGTT+TGG | - | tig0027684:13486-13505 | Msa1435290:intron | 30.0% |
| TTGATTCTGATATGTTTGGT+TGG | - | tig0027684:14005-14024 | Msa1435290:intron | 30.0% | |
| AGAGAGGCTAAAATTGATTA+CGG | - | tig0027684:14109-14128 | Msa1435290:intron | 30.0% | |
| ! | TTAATTCCGACATGTTTTGT+TGG | - | tig0027684:14142-14161 | Msa1435290:intron | 30.0% |
| TCAAAACCAACAAAACATGT+CGG | + | tig0027684:14151-14170 | None:intergenic | 30.0% | |
| !!! | GTAGCTTTTGATTCTAGAAT+TGG | - | tig0027684:14220-14239 | Msa1435290:intron | 30.0% |
| ! | TGAAATTTGAATGGATTTGG+TGG | - | tig0027684:14731-14750 | Msa1435290:intron | 30.0% |
| ATGTAACTGTTAATTGCAGA+TGG | - | tig0027684:14907-14926 | Msa1435290:intron | 30.0% | |
| !! | TGCGATTGGTTTATTAGTTA+AGG | - | tig0027684:15091-15110 | Msa1435290:intron | 30.0% |
| GTTTATTAGTTAAGGTTCCA+TGG | - | tig0027684:15099-15118 | Msa1435290:intron | 30.0% | |
| ! | GTAATGTTAGTGTTGCTAAT+TGG | - | tig0027684:15315-15334 | Msa1435290:intron | 30.0% |
| GGTGTTTAGAAATCATTATG+TGG | - | tig0027684:15349-15368 | Msa1435290:intron | 30.0% | |
| TCATTATGTGGCTTCTTAAT+AGG | - | tig0027684:15361-15380 | Msa1435290:intron | 30.0% | |
| TCAATATTCATGAGGATAGT+TGG | - | tig0027684:15435-15454 | Msa1435290:intron | 30.0% | |
| CAATATTCATGAGGATAGTT+GGG | - | tig0027684:15436-15455 | Msa1435290:intron | 30.0% | |
| TCTAATCAATACGTCTTACT+AGG | + | tig0027684:15595-15614 | None:intergenic | 30.0% | |
| !! | AGTAAGACGTATTGATTAGA+TGG | - | tig0027684:15595-15614 | Msa1435290:intron | 30.0% |
| !! | TCTAAATGGTTTTACCATAG+AGG | - | tig0027684:15693-15712 | Msa1435290:CDS | 30.0% |
| TCTTTACAAGAATCCAAACA+AGG | + | tig0027684:15823-15842 | None:intergenic | 30.0% | |
| ATCATCAATACCTTTGTAAC+TGG | + | tig0027684:16022-16041 | None:intergenic | 30.0% | |
| AGAATGATACTCTACTTATG+AGG | - | tig0027684:16067-16086 | Msa1435290:CDS | 30.0% | |
| ACTAAAATGTCCTTGCAATT+GGG | - | tig0027684:16256-16275 | Msa1435290:intron | 30.0% | |
| CTCAACTACTCTACATTAAT+TGG | + | tig0027684:16296-16315 | None:intergenic | 30.0% | |
| TAAGTACTTAGTTGTGTCTT+TGG | - | tig0027684:16635-16654 | Msa1435290:intron | 30.0% | |
| CTAAAAACTTCCTTCTTTCA+AGG | + | tig0027684:16682-16701 | None:intergenic | 30.0% | |
| CATAAAGAATTGTCTAGATG+GGG | + | tig0027684:16857-16876 | None:intergenic | 30.0% | |
| GCATAAAGAATTGTCTAGAT+GGG | + | tig0027684:16858-16877 | None:intergenic | 30.0% | |
| TGCATAAAGAATTGTCTAGA+TGG | + | tig0027684:16859-16878 | None:intergenic | 30.0% | |
| TTGTAAATAAGCCTGAATTC+AGG | + | tig0027684:16911-16930 | None:intergenic | 30.0% | |
| ! | GAATTCCCATTTAGTTTCTA+AGG | - | tig0027684:17017-17036 | Msa1435290:intron | 30.0% |
| ! | AGTAGCCTTAGAAACTAAAT+GGG | + | tig0027684:17025-17044 | None:intergenic | 30.0% |
| ATTTACTCGACAAATGCAAA+GGG | + | tig0027684:17107-17126 | None:intergenic | 30.0% | |
| CCAGATAATACATCTGAATA+AGG | + | tig0027684:17368-17387 | None:intergenic | 30.0% | |
| CCTTATTCAGATGTATTATC+TGG | - | tig0027684:17365-17384 | Msa1435290:CDS | 30.0% | |
| ! | TACAAATTCTCCTTTAAAGG+TGG | - | tig0027684:17588-17607 | Msa1435290:intron | 30.0% |
| CAATGCCTATTAGTAGTAAA+CGG | - | tig0027684:17727-17746 | Msa1435290:CDS | 30.0% | |
| GTAATCCGTTTACTACTAAT+AGG | + | tig0027684:17735-17754 | None:intergenic | 30.0% | |
| !! | AGAGAGTTACATTGATTTAG+TGG | - | tig0027684:18153-18172 | Msa1435290:CDS | 30.0% |
| GATACTTATCAAATACCAGT+TGG | - | tig0027684:18569-18588 | Msa1435290:intron | 30.0% | |
| AAATCAATGTAACTAGCACA+AGG | + | tig0027684:18629-18648 | None:intergenic | 30.0% | |
| !!! | TACTCGCAAGATTCTTTTTT+AGG | - | tig0027684:18780-18799 | Msa1435290:intron | 30.0% |
| ACAATGTCAAATTCCTAAAG+AGG | + | tig0027684:18890-18909 | None:intergenic | 30.0% | |
| ACAATGTCAAATTCCTAAAG+AGG | + | tig0027684:18890-18909 | None:intergenic | 30.0% | |
| ! | TTGTTGCATTTTTCATTTGC+AGG | - | tig0027684:19000-19019 | Msa1435290:intron | 30.0% |
| ATATGGACTTCTGAATTGTT+GGG | + | tig0027684:19054-19073 | None:intergenic | 30.0% | |
| ! | TTTTTCTGTACACTCTGATA+TGG | + | tig0027684:19071-19090 | None:intergenic | 30.0% |
| !!! | TAACTGAGGAAGTTTTAAAG+TGG | + | tig0027684:19381-19400 | None:intergenic | 30.0% |
| TAACAGAAAGATTCTCTGTT+TGG | + | tig0027684:19475-19494 | None:intergenic | 30.0% | |
| ! | CTTGCTACTTCATTATTTGA+AGG | + | tig0027684:19515-19534 | None:intergenic | 30.0% |
| ! | TTTTAGGCAAAAGATTTCGT+TGG | - | tig0027684:19564-19583 | Msa1435290:intron | 30.0% |
| TTTAGGCAAAAGATTTCGTT+GGG | - | tig0027684:19565-19584 | Msa1435290:intron | 30.0% | |
| AAGCCTGTGTACAATATATT+AGG | - | tig0027684:19663-19682 | Msa1435290:intron | 30.0% | |
| GATCCTAATATATTGTACAC+AGG | + | tig0027684:19669-19688 | None:intergenic | 30.0% | |
| AAATAAAATAAAGGGCAGTC+TGG | + | tig0027684:19918-19937 | None:intergenic | 30.0% | |
| !!! | TATTTTAGCACAAAGTGAAG+CGG | - | tig0027684:19943-19962 | Msa1435290:intron | 30.0% |
| AGGAGATAACACATAAACTA+AGG | - | tig0027684:20117-20136 | Msa1435290:intron | 30.0% | |
| AGACTCTTGAATTTCTTGAT+AGG | + | tig0027684:20174-20193 | None:intergenic | 30.0% | |
| ATCAAGAAATTCAAGAGTCT+TGG | - | tig0027684:20174-20193 | Msa1435290:intron | 30.0% | |
| ! | GGTTAGTTATTGAGTGTTTA+TGG | + | tig0027684:20210-20229 | None:intergenic | 30.0% |
| TAAATAAAGGAAAGGGAAAG+TGG | + | tig0027684:20238-20257 | None:intergenic | 30.0% | |
| GAAAGGGTAGAAGTAAATTA+TGG | + | tig0027684:20315-20334 | None:intergenic | 30.0% | |
| CATACTATTAGACCTCTTAT+TGG | + | tig0027684:20353-20372 | None:intergenic | 30.0% | |
| !!! | TGATAATGGCTCTATTTTGT+AGG | - | tig0027684:20464-20483 | Msa1435290:intron | 30.0% |
| AAGGTTATTTGTATCTCCAA+TGG | - | tig0027684:20682-20701 | Msa1435290:intron | 30.0% | |
| TTCAGATATGTTGAGTGATA+TGG | - | tig0027684:20763-20782 | Msa1435290:intron | 30.0% | |
| ATATGTTGAGTGATATGGAA+AGG | - | tig0027684:20768-20787 | Msa1435290:intron | 30.0% | |
| TCGTATTCTGACAATGTAAA+TGG | - | tig0027684:20794-20813 | Msa1435290:intron | 30.0% | |
| CGTATTCTGACAATGTAAAT+GGG | - | tig0027684:20795-20814 | Msa1435290:intron | 30.0% | |
| ! | TAAAGTATTTAAGCCCTGTT+TGG | - | tig0027684:21137-21156 | Msa1435290:intron | 30.0% |
| ATTTCTGACACATAAAGTCA+TGG | - | tig0027684:21487-21506 | Msa1435290:intron | 30.0% | |
| TCATGGTTCAAACTAGAATA+AGG | - | tig0027684:21504-21523 | Msa1435290:intron | 30.0% | |
| !! | CCCTAGATTTTTCAGAATTT+TGG | + | tig0027684:21565-21584 | None:intergenic | 30.0% |
| ATAGACCATTGAAAAATTCC+TGG | - | tig0027684:21760-21779 | Msa1435290:exon | 30.0% | |
| TAGACCATTGAAAAATTCCT+GGG | - | tig0027684:21761-21780 | Msa1435290:five_prime_UTR | 30.0% | |
| ! | CATTGTTCCTTTTCTGAATA+TGG | - | tig0027684:21944-21963 | Msa1435290:five_prime_UTR | 30.0% |
| ! | TTCCTTTTCTGAATATGGTT+TGG | - | tig0027684:21949-21968 | Msa1435290:five_prime_UTR | 30.0% |
| ! | GTTTTGCGTTTAAGTGCTTT+TGG | - | tig0027684:13259-13278 | Msa1435290:three_prime_UTR | 35.0% |
| TTCAAAACCGTATGAGAAGA+AGG | - | tig0027684:13405-13424 | Msa1435290:exon | 35.0% | |
| GCAACTGTTCTCCTAATTTA+GGG | + | tig0027684:13579-13598 | None:intergenic | 35.0% | |
| AGCAACTGTTCTCCTAATTT+AGG | + | tig0027684:13580-13599 | None:intergenic | 35.0% | |
| GATCTTGTAGGATTTCGATA+AGG | - | tig0027684:13738-13757 | Msa1435290:intron | 35.0% | |
| TGTAGGATTTCGATAAGGTT+TGG | - | tig0027684:13743-13762 | Msa1435290:intron | 35.0% | |
| ! | TCAATCACGTGATTTTCGTA+AGG | - | tig0027684:13783-13802 | Msa1435290:intron | 35.0% |
| !! | TCTGGCAAAAATTGAGTTGA+AGG | - | tig0027684:13871-13890 | Msa1435290:intron | 35.0% |
| ! | TGTTTGAAATGTGGATGCAT+TGG | - | tig0027684:13906-13925 | Msa1435290:intron | 35.0% |
| ! | TGATTAGTTCCATTCTAGAG+AGG | - | tig0027684:13956-13975 | Msa1435290:intron | 35.0% |
| AGAGAGGTCGAAATTGAATT+TGG | - | tig0027684:13972-13991 | Msa1435290:intron | 35.0% | |
| !!! | GTTTGGTTGGTTTTGTAAAG+TGG | - | tig0027684:14018-14037 | Msa1435290:intron | 35.0% |
| !! | TGTTTTGAATTGGGATGCAT+TGG | - | tig0027684:14045-14064 | Msa1435290:intron | 35.0% |
| !! | GTAATCAATTTTAGCCTCTC+TGG | + | tig0027684:14110-14129 | None:intergenic | 35.0% |
| !! | CAAAATCAGTTCTAAACCTC+TGG | - | tig0027684:14464-14483 | Msa1435290:CDS | 35.0% |
| !! | TAAACCTCTGGAATCAATGT+TGG | - | tig0027684:14476-14495 | Msa1435290:CDS | 35.0% |
| !! | TGTATGTTTGGTTCCACTTT+TGG | + | tig0027684:14507-14526 | None:intergenic | 35.0% |
| !! | TTTGAATGGATTTGGTGGAA+TGG | - | tig0027684:14736-14755 | Msa1435290:intron | 35.0% |
| ATGAGATTGAATACCAACCT+AGG | + | tig0027684:14884-14903 | None:intergenic | 35.0% | |
| !! | TTAGCTCTAGCATAAGTTTG+TGG | - | tig0027684:15137-15156 | Msa1435290:intron | 35.0% |
| TCTAGCATAAGTTTGTGGTT+TGG | - | tig0027684:15142-15161 | Msa1435290:intron | 35.0% | |
| CTAGCATAAGTTTGTGGTTT+GGG | - | tig0027684:15143-15162 | Msa1435290:intron | 35.0% | |
| GTCTTCTGCTTCTTGTTAAT+TGG | - | tig0027684:15200-15219 | Msa1435290:intron | 35.0% | |
| TTCTGCTTCTTGTTAATTGG+TGG | - | tig0027684:15203-15222 | Msa1435290:intron | 35.0% | |
| !! | TAATTGGTGGCTTTTTAGAG+TGG | - | tig0027684:15216-15235 | Msa1435290:intron | 35.0% |
| TTTCAGCTGATGTAGCATTA+CGG | - | tig0027684:15264-15283 | Msa1435290:intron | 35.0% | |
| !! | TGCTAATTGGTCTTCAATAG+AGG | - | tig0027684:15328-15347 | Msa1435290:intron | 35.0% |
| TCTTTGGTAAAACTCCTCTA+TGG | + | tig0027684:15710-15729 | None:intergenic | 35.0% | |
| ! | ATAGAGGAGTTTTACCAAAG+AGG | - | tig0027684:15709-15728 | Msa1435290:CDS | 35.0% |
| ! | TAGAAATCTTTTCCCAAGGT+GGG | + | tig0027684:15743-15762 | None:intergenic | 35.0% |
| ! | ATAGAAATCTTTTCCCAAGG+TGG | + | tig0027684:15744-15763 | None:intergenic | 35.0% |
| AATCGGATAACGTAATCATG+TGG | - | tig0027684:15781-15800 | Msa1435290:CDS | 35.0% | |
| TACTCTACTTCCAGTTACAA+AGG | - | tig0027684:16009-16028 | Msa1435290:CDS | 35.0% | |
| GACTAAAATGTCCTTGCAAT+TGG | - | tig0027684:16255-16274 | Msa1435290:intron | 35.0% | |
| CTAAAATGTCCTTGCAATTG+GGG | - | tig0027684:16257-16276 | Msa1435290:intron | 35.0% | |
| AGACACTTAATATGAGACAG+AGG | - | tig0027684:16427-16446 | Msa1435290:intron | 35.0% | |
| GTAATTGTTTCCAAGACCTT+TGG | - | tig0027684:16451-16470 | Msa1435290:intron | 35.0% | |
| ! | ATACTTTTGTACCATGCCAA+AGG | + | tig0027684:16470-16489 | None:intergenic | 35.0% |
| ATTGTAGACGAAATGTTCAG+AGG | + | tig0027684:16506-16525 | None:intergenic | 35.0% | |
| ! | TTGTGTCTTTGGTCTTTAAC+AGG | - | tig0027684:16646-16665 | Msa1435290:intron | 35.0% |
| AAATGACTGCTGAATTTCGT+GGG | - | tig0027684:16756-16775 | Msa1435290:intron | 35.0% | |
| GGCTTATTTACAACAAGAGT+TGG | - | tig0027684:16918-16937 | Msa1435290:intron | 35.0% | |
| TTAAATTGGAAGGAGAACTC+TGG | - | tig0027684:16968-16987 | Msa1435290:intron | 35.0% | |
| TAAATTGGAAGGAGAACTCT+GGG | - | tig0027684:16969-16988 | Msa1435290:intron | 35.0% | |
| ! | GAGTAGCCTTAGAAACTAAA+TGG | + | tig0027684:17026-17045 | None:intergenic | 35.0% |
| TTTACTCGACAAATGCAAAG+GGG | + | tig0027684:17106-17125 | None:intergenic | 35.0% | |
| CATTTACTCGACAAATGCAA+AGG | + | tig0027684:17108-17127 | None:intergenic | 35.0% | |
| TGAGCTATCAAGTCTTCAAT+AGG | + | tig0027684:17198-17217 | None:intergenic | 35.0% | |
| ! | TTGAAGACTTGATAGCTCAT+CGG | - | tig0027684:17199-17218 | Msa1435290:intron | 35.0% |
| AACAGTTGATCTCCAGATAT+TGG | + | tig0027684:17260-17279 | None:intergenic | 35.0% | |
| !!! | AATTTTAGGTACCGAATCTC+TGG | - | tig0027684:17302-17321 | Msa1435290:CDS | 35.0% |
| ATGTATTATCTGGTGACTCT+GGG | - | tig0027684:17375-17394 | Msa1435290:intron | 35.0% | |
| TCGACATAGCAGAAGTTATA+CGG | - | tig0027684:17507-17526 | Msa1435290:intron | 35.0% | |
| CCAGATGAAGTGATTGTTTA+TGG | + | tig0027684:17559-17578 | None:intergenic | 35.0% | |
| CCATAAACAATCACTTCATC+TGG | - | tig0027684:17556-17575 | Msa1435290:intron | 35.0% | |
| ACATATGTGACCACCTTTAA+AGG | + | tig0027684:17601-17620 | None:intergenic | 35.0% | |
| CATACACAACAATGCAAGAA+AGG | + | tig0027684:17634-17653 | None:intergenic | 35.0% | |
| CTTTCTTGCATTGTTGTGTA+TGG | - | tig0027684:17632-17651 | Msa1435290:CDS | 35.0% | |
| GCATTGTTGTGTATGGTTTA+TGG | - | tig0027684:17639-17658 | Msa1435290:CDS | 35.0% | |
| CTATGTGAATCGCTGTATTT+AGG | + | tig0027684:17701-17720 | None:intergenic | 35.0% | |
| ACACCAAGACAAGACATATA+AGG | + | tig0027684:18280-18299 | None:intergenic | 35.0% | |
| TTAATTAAGGAGGAAGAGCA+AGG | + | tig0027684:18513-18532 | None:intergenic | 35.0% | |
| TATGGACTTCTGAATTGTTG+GGG | + | tig0027684:19053-19072 | None:intergenic | 35.0% | |
| GATATGGACTTCTGAATTGT+TGG | + | tig0027684:19055-19074 | None:intergenic | 35.0% | |
| TACAGAAAAAGTGAACTGCT+TGG | - | tig0027684:19081-19100 | Msa1435290:intron | 35.0% | |
| CAATAGATGTGGAGTTAGAT+TGG | + | tig0027684:19110-19129 | None:intergenic | 35.0% | |
| TGATGTCTGTTCAATAGATG+TGG | + | tig0027684:19121-19140 | None:intergenic | 35.0% | |
| !!! | TGAGGAAGTTTTAAAGTGGA+GGG | + | tig0027684:19377-19396 | None:intergenic | 35.0% |
| AATGAAGTAGCAAGTTCAGA+AGG | - | tig0027684:19521-19540 | Msa1435290:intron | 35.0% | |
| TTAGGCAAAAGATTTCGTTG+GGG | - | tig0027684:19566-19585 | Msa1435290:intron | 35.0% | |
| GGGATAAAAAACCATCCTTT+GGG | - | tig0027684:19587-19606 | Msa1435290:intron | 35.0% | |
| ! | GCTTAAGCTTTTAGCAGAAT+TGG | - | tig0027684:19623-19642 | Msa1435290:intron | 35.0% |
| AAATGGATATTGAGGAGGAT+AGG | + | tig0027684:19697-19716 | None:intergenic | 35.0% | |
| AACCTCCTGTGTAAAAAACA+GGG | - | tig0027684:19820-19839 | Msa1435290:intron | 35.0% | |
| GTACAATACACCAAAATGGT+GGG | - | tig0027684:19852-19871 | Msa1435290:intron | 35.0% | |
| TACAATACACCAAAATGGTG+GGG | - | tig0027684:19853-19872 | Msa1435290:intron | 35.0% | |
| !! | ATTTTAGCACAAAGTGAAGC+GGG | - | tig0027684:19944-19963 | Msa1435290:intron | 35.0% |
| AGAGATAGTATACTGTTGCA+AGG | - | tig0027684:20142-20161 | Msa1435290:intron | 35.0% | |
| GAGAACAATATAAGGGGAAA+GGG | + | tig0027684:20331-20350 | None:intergenic | 35.0% | |
| AGGTCTAATAGTATGTTCAG+AGG | - | tig0027684:20358-20377 | Msa1435290:CDS | 35.0% | |
| TCTGTATGCTAGAAGTAAAG+TGG | - | tig0027684:20440-20459 | Msa1435290:intron | 35.0% | |
| AGAAGTAAAGTGGCTGATAA+TGG | - | tig0027684:20450-20469 | Msa1435290:intron | 35.0% | |
| TGTTTGTCCAGAATTTGAAG+AGG | - | tig0027684:20498-20517 | Msa1435290:intron | 35.0% | |
| TTACTGACCTCTTCAAATTC+TGG | + | tig0027684:20508-20527 | None:intergenic | 35.0% | |
| ! | AGAAAAGCTAGTCTCTGATA+GGG | + | tig0027684:20621-20640 | None:intergenic | 35.0% |
| TAACTTCATTGAGGAGCAAA+AGG | - | tig0027684:20663-20682 | Msa1435290:intron | 35.0% | |
| ! | AATGGGTTTCTCTCATATAC+CGG | - | tig0027684:20812-20831 | Msa1435290:intron | 35.0% |
| ATCGGATGTTTCATTTGAAC+CGG | + | tig0027684:20834-20853 | None:intergenic | 35.0% | |
| !!! | AATGGTATTTTTTTGGGGGT+TGG | - | tig0027684:21046-21065 | Msa1435290:intron | 35.0% |
| !!! | ATGGTATTTTTTTGGGGGTT+GGG | - | tig0027684:21047-21066 | Msa1435290:intron | 35.0% |
| GATGATGAAATGCAGTTTGA+AGG | - | tig0027684:21460-21479 | Msa1435290:intron | 35.0% | |
| GAATTTCCGTTTCTACTGTT+GGG | - | tig0027684:21595-21614 | Msa1435290:CDS | 35.0% | |
| GCAGTTGCTAAAAATTATGC+AGG | + | tig0027684:21657-21676 | None:intergenic | 35.0% | |
| ! | CATCAATCATGTCATTTCAG+AGG | + | tig0027684:21790-21809 | None:intergenic | 35.0% |
| AAATGACATGATTGATGCAG+TGG | - | tig0027684:21793-21812 | Msa1435290:five_prime_UTR | 35.0% | |
| !! | TGGATTGCTATTCTTTTGCT+GGG | - | tig0027684:21813-21832 | Msa1435290:five_prime_UTR | 35.0% |
| CACCAAACCATATTCAGAAA+AGG | + | tig0027684:21954-21973 | None:intergenic | 35.0% | |
| !! | ATTTGCTGATTCTTACACGG+CGG | + | tig0027684:13317-13336 | None:intergenic | 40.0% |
| GTCATCACCTTCTTCTCATA+CGG | + | tig0027684:13415-13434 | None:intergenic | 40.0% | |
| GTTGTTAGGTTTGGATCCAT+CGG | - | tig0027684:13495-13514 | Msa1435290:intron | 40.0% | |
| CGTCATTCCAACCCTAAATT+AGG | - | tig0027684:13565-13584 | Msa1435290:intron | 40.0% | |
| ! | CTGTTCTCCTAATTTAGGGT+TGG | + | tig0027684:13575-13594 | None:intergenic | 40.0% |
| TTCATTCTCTCTTCTCTCAG+AGG | - | tig0027684:13604-13623 | Msa1435290:intron | 40.0% | |
| GATTGAGCGGAATCGAAAAT+CGG | + | tig0027684:13769-13788 | None:intergenic | 40.0% | |
| ACGAAAATCACGTGATTGAG+CGG | + | tig0027684:13782-13801 | None:intergenic | 40.0% | |
| ! | CACGTGATTTTCGTAAGGTA+AGG | - | tig0027684:13788-13807 | Msa1435290:intron | 40.0% |
| ! | CAATTTCGACCTCTCTAGAA+TGG | + | tig0027684:13968-13987 | None:intergenic | 40.0% |
| GAGGTCGAAATTGAATTTGG+AGG | - | tig0027684:13975-13994 | Msa1435290:intron | 40.0% | |
| !! | AATTTTAGCCTCTCTGGAAG+TGG | + | tig0027684:14104-14123 | None:intergenic | 40.0% |
| GAGGCTAAAATTGATTACGG+AGG | - | tig0027684:14112-14131 | Msa1435290:intron | 40.0% | |
| !! | AATGTTGGTTCCTCCAAAAG+TGG | - | tig0027684:14491-14510 | Msa1435290:CDS | 40.0% |
| !! | ATGTTTGGTTCCACTTTTGG+AGG | + | tig0027684:14504-14523 | None:intergenic | 40.0% |
| !! | GTTTAATTTGTATGCACCGC+TGG | - | tig0027684:14533-14552 | Msa1435290:CDS | 40.0% |
| ! | TCTAAAGCCACAAGCACAAT+TGG | + | tig0027684:14591-14610 | None:intergenic | 40.0% |
| ACTTCCTAGAAGCAATTCGA+GGG | - | tig0027684:14832-14851 | Msa1435290:intron | 40.0% | |
| ! | TTGTGGTTTGGGAATCTTGT+TGG | - | tig0027684:15154-15173 | Msa1435290:intron | 40.0% |
| AATCTTGTTGGATTCGTTGC+TGG | - | tig0027684:15166-15185 | Msa1435290:intron | 40.0% | |
| TTACTAGGCTTGGGTTCTAT+TGG | + | tig0027684:15580-15599 | None:intergenic | 40.0% | |
| CAATACGTCTTACTAGGCTT+GGG | + | tig0027684:15589-15608 | None:intergenic | 40.0% | |
| TCAATACGTCTTACTAGGCT+TGG | + | tig0027684:15590-15609 | None:intergenic | 40.0% | |
| GTTTACAGAAGCTCCTTGTT+TGG | - | tig0027684:15807-15826 | Msa1435290:CDS | 40.0% | |
| !!! | GTAGGTTTGTTGAGCTTTTG+TGG | - | tig0027684:15876-15895 | Msa1435290:intron | 40.0% |
| TCATCGACGGACATTTACTT+CGG | - | tig0027684:15928-15947 | Msa1435290:intron | 40.0% | |
| GAGAATGCTACATCAGTCAA+TGG | + | tig0027684:15980-15999 | None:intergenic | 40.0% | |
| TGTTCAGAGGAAAAGAGGTA+TGG | + | tig0027684:16493-16512 | None:intergenic | 40.0% | |
| CGAAATGTTCAGAGGAAAAG+AGG | + | tig0027684:16498-16517 | None:intergenic | 40.0% | |
| CAAGAATAGCCCTTGAAAGA+AGG | - | tig0027684:16669-16688 | Msa1435290:intron | 40.0% | |
| ATGCAGAAATGGCTGTACAA+CGG | - | tig0027684:16705-16724 | Msa1435290:intron | 40.0% | |
| GAAATGACTGCTGAATTTCG+TGG | - | tig0027684:16755-16774 | Msa1435290:intron | 40.0% | |
| !! | TTTCTAAGGCTACTCGTCTA+TGG | - | tig0027684:17031-17050 | Msa1435290:intron | 40.0% |
| !! | TTCTAAGGCTACTCGTCTAT+GGG | - | tig0027684:17032-17051 | Msa1435290:intron | 40.0% |
| AACACGAAGTTCTTGCATCA+GGG | - | tig0027684:17172-17191 | Msa1435290:intron | 40.0% | |
| ! | TGAAGACTTGATAGCTCATC+GGG | - | tig0027684:17200-17219 | Msa1435290:intron | 40.0% |
| TTGATCTCCAGATATTGGAG+AGG | + | tig0027684:17255-17274 | None:intergenic | 40.0% | |
| TATCTGGAGATCAACTGTTC+TGG | - | tig0027684:17261-17280 | Msa1435290:intron | 40.0% | |
| TACATCTGAATAAGGAGCCT+GGG | + | tig0027684:17360-17379 | None:intergenic | 40.0% | |
| ATACATCTGAATAAGGAGCC+TGG | + | tig0027684:17361-17380 | None:intergenic | 40.0% | |
| GATGTATTATCTGGTGACTC+TGG | - | tig0027684:17374-17393 | Msa1435290:intron | 40.0% | |
| TGTATTATCTGGTGACTCTG+GGG | - | tig0027684:17376-17395 | Msa1435290:intron | 40.0% | |
| TTGTTGTCTGTTTGCACTGA+AGG | + | tig0027684:17407-17426 | None:intergenic | 40.0% | |
| TCAGTGCAAACAGACAACAA+AGG | - | tig0027684:17407-17426 | Msa1435290:intron | 40.0% | |
| CAGTGCAAACAGACAACAAA+GGG | - | tig0027684:17408-17427 | Msa1435290:intron | 40.0% | |
| AGTGCAAACAGACAACAAAG+GGG | - | tig0027684:17409-17428 | Msa1435290:intron | 40.0% | |
| ACAACAGTGGATGACAGAAA+TGG | - | tig0027684:17467-17486 | Msa1435290:intron | 40.0% | |
| CAACAGTGGATGACAGAAAT+GGG | - | tig0027684:17468-17487 | Msa1435290:intron | 40.0% | |
| ACACAACAATGCAAGAAAGG+AGG | + | tig0027684:17631-17650 | None:intergenic | 40.0% | |
| ! | TCAAGCTTTTATCCATCTGC+AGG | - | tig0027684:17781-17800 | Msa1435290:CDS | 40.0% |
| ! | GCAAAAGCAAATGATGGAGA+GGG | - | tig0027684:17803-17822 | Msa1435290:CDS | 40.0% |
| TGTGCACTACGCAATATATC+TGG | + | tig0027684:17830-17849 | None:intergenic | 40.0% | |
| AGATATATTGCGTAGTGCAC+AGG | - | tig0027684:17829-17848 | Msa1435290:CDS | 40.0% | |
| !!! | GCTTGTTTTAATGCATCACC+TGG | + | tig0027684:17928-17947 | None:intergenic | 40.0% |
| GGATCAATGAAGTATGGTAG+AGG | + | tig0027684:18046-18065 | None:intergenic | 40.0% | |
| GATGCAGGATCAATGAAGTA+TGG | + | tig0027684:18052-18071 | None:intergenic | 40.0% | |
| !! | TGGCCTTATATGTCTTGTCT+TGG | - | tig0027684:18274-18293 | Msa1435290:intron | 40.0% |
| !! | ATGTCTTGTCTTGGTGTTTG+TGG | - | tig0027684:18283-18302 | Msa1435290:intron | 40.0% |
| TCTCATAGAACAAAGCCAAC+TGG | + | tig0027684:18587-18606 | None:intergenic | 40.0% | |
| TACTCGCAAGATTCCTCTTT+AGG | - | tig0027684:18874-18893 | Msa1435290:intron | 40.0% | |
| TACTCGCAAGATTCCTCTTT+AGG | - | tig0027684:18874-18893 | Msa1435290:intron | 40.0% | |
| TAGATGTGGAGTTAGATTGG+AGG | + | tig0027684:19107-19126 | None:intergenic | 40.0% | |
| !! | GAAAGTGGTACTGATGATGT+TGG | - | tig0027684:19299-19318 | Msa1435290:intron | 40.0% |
| ! | TACTGATGATGTTGGTGAGT+TGG | - | tig0027684:19307-19326 | Msa1435290:intron | 40.0% |
| GTCTAATGTTCAGCTTGACA+AGG | - | tig0027684:19340-19359 | Msa1435290:intron | 40.0% | |
| !!! | CTGAGGAAGTTTTAAAGTGG+AGG | + | tig0027684:19378-19397 | None:intergenic | 40.0% |
| ! | TTCCAGCTTTTCCAGAAGAT+GGG | + | tig0027684:19415-19434 | None:intergenic | 40.0% |
| ! | TTTCCAGCTTTTCCAGAAGA+TGG | + | tig0027684:19416-19435 | None:intergenic | 40.0% |
| GAAAAGCTGGAAATGTGCAA+AGG | - | tig0027684:19423-19442 | Msa1435290:intron | 40.0% | |
| AGAAAGATTCTCTGTTTGGC+TGG | + | tig0027684:19471-19490 | None:intergenic | 40.0% | |
| TAGGCAAAAGATTTCGTTGG+GGG | - | tig0027684:19567-19586 | Msa1435290:intron | 40.0% | |
| GGGGATAAAAAACCATCCTT+TGG | - | tig0027684:19586-19605 | Msa1435290:intron | 40.0% | |
| CAACCTCCTGTGTAAAAAAC+AGG | - | tig0027684:19819-19838 | Msa1435290:intron | 40.0% | |
| !!! | TACCCTGTTTTTTACACAGG+AGG | + | tig0027684:19825-19844 | None:intergenic | 40.0% |
| !!! | CCTTACCCTGTTTTTTACAC+AGG | + | tig0027684:19828-19847 | None:intergenic | 40.0% |
| CCTGTGTAAAAAACAGGGTA+AGG | - | tig0027684:19825-19844 | Msa1435290:intron | 40.0% | |
| CTGCGTACAATACACCAAAA+TGG | - | tig0027684:19848-19867 | Msa1435290:intron | 40.0% | |
| CGTACAATACACCAAAATGG+TGG | - | tig0027684:19851-19870 | Msa1435290:intron | 40.0% | |
| !! | CTCTGCTTTTAGCTAAAGAC+TGG | + | tig0027684:19981-20000 | None:intergenic | 40.0% |
| AGGAAAGGGAAAGTGGTTAT+TGG | + | tig0027684:20231-20250 | None:intergenic | 40.0% | |
| GGAGAACAATATAAGGGGAA+AGG | + | tig0027684:20332-20351 | None:intergenic | 40.0% | |
| TTGAAGCTAATTGCTCTGTG+AGG | - | tig0027684:20406-20425 | Msa1435290:intron | 40.0% | |
| TGAAGCTAATTGCTCTGTGA+GGG | - | tig0027684:20407-20426 | Msa1435290:intron | 40.0% | |
| ! | AAAAGCTAGTCTCTGATAGG+GGG | + | tig0027684:20619-20638 | None:intergenic | 40.0% |
| ! | GAAAAGCTAGTCTCTGATAG+GGG | + | tig0027684:20620-20639 | None:intergenic | 40.0% |
| ! | GAGAAAAGCTAGTCTCTGAT+AGG | + | tig0027684:20622-20641 | None:intergenic | 40.0% |
| TGATCAGTTTGAAGACTTGC+TGG | - | tig0027684:20934-20953 | Msa1435290:intron | 40.0% | |
| ! | GATCAGTTTGAAGACTTGCT+GGG | - | tig0027684:20935-20954 | Msa1435290:intron | 40.0% |
| !!! | TATTTTTTTGGGGGTTGGGT+AGG | - | tig0027684:21051-21070 | Msa1435290:intron | 40.0% |
| TACCTGGTTTCACTTCTCTA+AGG | - | tig0027684:21074-21093 | Msa1435290:intron | 40.0% | |
| TTCCTTAGAGAAGTGAAACC+AGG | + | tig0027684:21079-21098 | None:intergenic | 40.0% | |
| CCAGGATAACTAACGAAAAC+AGG | + | tig0027684:21281-21300 | None:intergenic | 40.0% | |
| ! | CCTGTTTTCGTTAGTTATCC+TGG | - | tig0027684:21278-21297 | Msa1435290:intron | 40.0% |
| TAGTTATCCTGGAGAGCTAA+TGG | - | tig0027684:21289-21308 | Msa1435290:intron | 40.0% | |
| ! | CTTATTTCCATTAGCTCTCC+AGG | + | tig0027684:21299-21318 | None:intergenic | 40.0% |
| TAAGCACTCATGACACTGTT+TGG | + | tig0027684:21366-21385 | None:intergenic | 40.0% | |
| CTAAACAAGCCCATAGTAAG+AGG | - | tig0027684:21415-21434 | Msa1435290:intron | 40.0% | |
| GGAATTTCCGTTTCTACTGT+TGG | - | tig0027684:21594-21613 | Msa1435290:CDS | 40.0% | |
| AGCACAACTACATGTTTCTC+AGG | + | tig0027684:21633-21652 | None:intergenic | 40.0% | |
| !! | GTGGATTGCTATTCTTTTGC+TGG | - | tig0027684:21812-21831 | Msa1435290:five_prime_UTR | 40.0% |
| ! | TGTGCACATTGACTGATTAG+TGG | - | tig0027684:21987-22006 | Msa1435290:five_prime_UTR | 40.0% |
| ! | TGAGAAGAAGGTGATGACGA+TGG | - | tig0027684:13417-13436 | Msa1435290:exon | 45.0% |
| ! | GGTTTGGATCCATCGGTTAT+TGG | - | tig0027684:13502-13521 | Msa1435290:intron | 45.0% |
| ! | GATCCATCGGTTATTGGAGT+TGG | - | tig0027684:13508-13527 | Msa1435290:intron | 45.0% |
| TCGAATTCAACTCCTCGTGT+TGG | - | tig0027684:13535-13554 | Msa1435290:intron | 45.0% | |
| ! | GATTAGTTCCACTTCCAGAG+AGG | - | tig0027684:14093-14112 | Msa1435290:intron | 45.0% |
| !! | GGAACCAACATTGATTCCAG+AGG | + | tig0027684:14483-14502 | None:intergenic | 45.0% |
| CTGTAAAACTGCTACACCAG+CGG | + | tig0027684:14552-14571 | None:intergenic | 45.0% | |
| AACCGAACCAATTGTGCTTG+TGG | - | tig0027684:14581-14600 | Msa1435290:CDS | 45.0% | |
| AGCCACAAGCACAATTGGTT+CGG | + | tig0027684:14586-14605 | None:intergenic | 45.0% | |
| !!! | TGGAATGGTTTTGAACCGTG+TGG | - | tig0027684:14751-14770 | Msa1435290:intron | 45.0% |
| !!! | AATGGTTTTGAACCGTGTGG+TGG | - | tig0027684:14754-14773 | Msa1435290:intron | 45.0% |
| ACCAAACACATTCCACCACA+CGG | + | tig0027684:14769-14788 | None:intergenic | 45.0% | |
| ! | TGTGGTGGAATGTGTTTGGT+AGG | - | tig0027684:14769-14788 | Msa1435290:intron | 45.0% |
| ATTAGTGAGCTTGAGTCGCA+AGG | - | tig0027684:14806-14825 | Msa1435290:intron | 45.0% | |
| CACTTCCTAGAAGCAATTCG+AGG | - | tig0027684:14831-14850 | Msa1435290:intron | 45.0% | |
| GAAACCCTCGAATTGCTTCT+AGG | + | tig0027684:14839-14858 | None:intergenic | 45.0% | |
| ! | TCTTCGCTTGCTACTTGTTG+TGG | - | tig0027684:14857-14876 | Msa1435290:intron | 45.0% |
| !! | TTGCTACTTGTTGTGGACCT+AGG | - | tig0027684:14864-14883 | Msa1435290:intron | 45.0% |
| !! | TACTTGTTGTGGACCTAGGT+TGG | - | tig0027684:14868-14887 | Msa1435290:intron | 45.0% |
| TGTTGTACGCTTACTGCGAT+TGG | - | tig0027684:15077-15096 | Msa1435290:intron | 45.0% | |
| AAGAGAGCGATAGCATTCCA+TGG | + | tig0027684:15119-15138 | None:intergenic | 45.0% | |
| !! | TGGTGATGCATTTTGCAGCA+GGG | - | tig0027684:15236-15255 | Msa1435290:intron | 45.0% |
| TAGCATTACGGTGGCAGATT+TGG | - | tig0027684:15276-15295 | Msa1435290:intron | 45.0% | |
| ! | ATTACGGTGGCAGATTTGGT+GGG | - | tig0027684:15280-15299 | Msa1435290:intron | 45.0% |
| ! | TCGAAAGAGCATAAGCTGAG+TGG | - | tig0027684:15407-15426 | Msa1435290:intron | 45.0% |
| AGGATAGTTGGGTAGATGAG+TGG | - | tig0027684:15447-15466 | Msa1435290:intron | 45.0% | |
| TCAGTCAATGGTGTAGGCAA+TGG | + | tig0027684:15968-15987 | None:intergenic | 45.0% | |
| GCTACATCAGTCAATGGTGT+AGG | + | tig0027684:15974-15993 | None:intergenic | 45.0% | |
| TCCTTGCAATTGGGGTTATG+TGG | - | tig0027684:16265-16284 | Msa1435290:intron | 45.0% | |
| TCCACATAACCCCAATTGCA+AGG | + | tig0027684:16269-16288 | None:intergenic | 45.0% | |
| TGTTTCCAAGACCTTTGGCA+TGG | - | tig0027684:16456-16475 | Msa1435290:intron | 45.0% | |
| TTGTACCATGCCAAAGGTCT+TGG | + | tig0027684:16464-16483 | None:intergenic | 45.0% | |
| GCAGGCTATGTGGTCTAATT+TGG | - | tig0027684:16727-16746 | Msa1435290:intron | 45.0% | |
| GAATTGTCTAGATGGGGAGA+AGG | + | tig0027684:16851-16870 | None:intergenic | 45.0% | |
| CAACACGAAGTTCTTGCATC+AGG | - | tig0027684:17171-17190 | Msa1435290:intron | 45.0% | |
| TGATAGCTCATCGGGAACAT+AGG | - | tig0027684:17208-17227 | Msa1435290:intron | 45.0% | |
| TACCTTGCCTCTCCAATATC+TGG | - | tig0027684:17245-17264 | Msa1435290:intron | 45.0% | |
| GCAGAGATGATCCAGAGATT+CGG | + | tig0027684:17316-17335 | None:intergenic | 45.0% | |
| ATCATCTCTGCTTGCAGCAA+TGG | - | tig0027684:17325-17344 | Msa1435290:CDS | 45.0% | |
| GACAACAAAGGGGAGATTGA+TGG | - | tig0027684:17419-17438 | Msa1435290:intron | 45.0% | |
| CAGTGAGACATTGACAACAG+TGG | - | tig0027684:17454-17473 | Msa1435290:intron | 45.0% | |
| CTTCTGCTATGTCGACAGTT+TGG | + | tig0027684:17502-17521 | None:intergenic | 45.0% | |
| TAGCAGAAGTTATACGGCGT+TGG | - | tig0027684:17513-17532 | Msa1435290:intron | 45.0% | |
| TATGGCCACCAAATGCGAAT+AGG | - | tig0027684:17657-17676 | Msa1435290:CDS | 45.0% | |
| ATGGCCACCAAATGCGAATA+GGG | - | tig0027684:17658-17677 | Msa1435290:CDS | 45.0% | |
| ATAAGCCCCCTATTCGCATT+TGG | + | tig0027684:17668-17687 | None:intergenic | 45.0% | |
| !! | CATTTGCTTTTGCCTGCAGA+TGG | + | tig0027684:17796-17815 | None:intergenic | 45.0% |
| CTGCAGGCAAAAGCAAATGA+TGG | - | tig0027684:17797-17816 | Msa1435290:CDS | 45.0% | |
| ! | GGCAAAAGCAAATGATGGAG+AGG | - | tig0027684:17802-17821 | Msa1435290:CDS | 45.0% |
| ATATTGCGTAGTGCACAGGA+AGG | - | tig0027684:17833-17852 | Msa1435290:CDS | 45.0% | |
| AAGGGTTGCTGCTAAAGACT+CGG | + | tig0027684:17876-17895 | None:intergenic | 45.0% | |
| TCTCTTCAGCGAAAAGATGC+AGG | + | tig0027684:18067-18086 | None:intergenic | 45.0% | |
| ! | TTTTAAGCATGCCTTGCCTG+AGG | - | tig0027684:18239-18258 | Msa1435290:CDS | 45.0% |
| TTTAAGCATGCCTTGCCTGA+GGG | - | tig0027684:18240-18259 | Msa1435290:CDS | 45.0% | |
| AAATTCTAACCCCTCAGGCA+AGG | + | tig0027684:18253-18272 | None:intergenic | 45.0% | |
| ! | GCCTGAGGGGTTAGAATTTT+TGG | - | tig0027684:18254-18273 | Msa1435290:intron | 45.0% |
| GCCAAAAATTCTAACCCCTC+AGG | + | tig0027684:18258-18277 | None:intergenic | 45.0% | |
| CTTGGATAGGTGATGTTGAC+TGG | + | tig0027684:19147-19166 | None:intergenic | 45.0% | |
| GGGGTCATGCTAAATAACTG+AGG | + | tig0027684:19395-19414 | None:intergenic | 45.0% | |
| TTTAGCATGACCCCATCTTC+TGG | - | tig0027684:19401-19420 | Msa1435290:intron | 45.0% | |
| ! | TCCAGCTTTTCCAGAAGATG+GGG | + | tig0027684:19414-19433 | None:intergenic | 45.0% |
| AAGCTGGAAATGTGCAAAGG+CGG | - | tig0027684:19426-19445 | Msa1435290:intron | 45.0% | |
| TTCAGTAGAGACCCAAAGGA+TGG | + | tig0027684:19601-19620 | None:intergenic | 45.0% | |
| GCAATTCAGTAGAGACCCAA+AGG | + | tig0027684:19605-19624 | None:intergenic | 45.0% | |
| AGCAGAATTGGTCCTTGACA+TGG | - | tig0027684:19635-19654 | Msa1435290:intron | 45.0% | |
| ! | CAGGCTTTGATACCATGTCA+AGG | + | tig0027684:19650-19669 | None:intergenic | 45.0% |
| ! | GTTGTTTCCAGGAGTTGAAC+TGG | + | tig0027684:19803-19822 | None:intergenic | 45.0% |
| ! | TTACACAGGAGGTTGTTTCC+AGG | + | tig0027684:19814-19833 | None:intergenic | 45.0% |
| ATATACGCAGGGTCCAAGAA+GGG | + | tig0027684:19880-19899 | None:intergenic | 45.0% | |
| TTCTTGGACCCTGCGTATAT+GGG | - | tig0027684:19880-19899 | Msa1435290:intron | 45.0% | |
| CTAAAGCTCCCATATACGCA+GGG | + | tig0027684:19891-19910 | None:intergenic | 45.0% | |
| ACTAAAGCTCCCATATACGC+AGG | + | tig0027684:19892-19911 | None:intergenic | 45.0% | |
| CGGAATAGTAGCCATTCTGA+CGG | - | tig0027684:20572-20591 | Msa1435290:intron | 45.0% | |
| TCAAGCAAAGGATCGTCCAT+TGG | + | tig0027684:20701-20720 | None:intergenic | 45.0% | |
| GATGCATGACTCTCAAGCAA+AGG | + | tig0027684:20713-20732 | None:intergenic | 45.0% | |
| GAGTCATGCATCAGATGAAC+AGG | - | tig0027684:20721-20740 | Msa1435290:intron | 45.0% | |
| ATGAAACATCCGATGCACGA+CGG | - | tig0027684:20840-20859 | Msa1435290:intron | 45.0% | |
| AAACATTGACCGTCGTGCAT+CGG | + | tig0027684:20852-20871 | None:intergenic | 45.0% | |
| ! | ACGGTCAATGTTTGACTTCG+AGG | - | tig0027684:20859-20878 | Msa1435290:intron | 45.0% |
| TTTCTCACCACCCATGCTAA+TGG | - | tig0027684:20895-20914 | Msa1435290:intron | 45.0% | |
| AGTGACGAGTCCATTAGCAT+GGG | + | tig0027684:20908-20927 | None:intergenic | 45.0% | |
| AAGTGACGAGTCCATTAGCA+TGG | + | tig0027684:20909-20928 | None:intergenic | 45.0% | |
| AGCTGAGGTCCTCTTACTAT+GGG | + | tig0027684:21427-21446 | None:intergenic | 45.0% | |
| AAGCTGAGGTCCTCTTACTA+TGG | + | tig0027684:21428-21447 | None:intergenic | 45.0% | |
| TCTAGAGAACACTGAAGCTG+AGG | + | tig0027684:21442-21461 | None:intergenic | 45.0% | |
| CTCACTCCCAACAGTAGAAA+CGG | + | tig0027684:21604-21623 | None:intergenic | 45.0% | |
| TTTCTACTGTTGGGAGTGAG+TGG | - | tig0027684:21604-21623 | Msa1435290:CDS | 45.0% | |
| ATGGTCTATCAATGCCGTGT+CGG | + | tig0027684:21749-21768 | None:intergenic | 45.0% | |
| !! | GCTGCCCAGGAATTTTTCAA+TGG | + | tig0027684:21768-21787 | None:intergenic | 45.0% |
| GTCGTGTCATACAACGTGAA+GGG | + | tig0027684:21849-21868 | None:intergenic | 45.0% | |
| TGTCGTGTCATACAACGTGA+AGG | + | tig0027684:21850-21869 | None:intergenic | 45.0% | |
| GACACGACACTCTTGTATCT+TGG | - | tig0027684:21861-21880 | Msa1435290:five_prime_UTR | 45.0% | |
| AGTCAATGTGCACAAAGCAC+TGG | + | tig0027684:21981-22000 | None:intergenic | 45.0% | |
| !!! | AAAATTGATAATAAAAAATA+GGG | + | tig0027684:19267-19286 | None:intergenic | 5.0% |
| !!! | TAAAATTGATAATAAAAAAT+AGG | + | tig0027684:19268-19287 | None:intergenic | 5.0% |
| !! | TTTAAATCAATTATAAAAAA+TGG | + | tig0027684:19714-19733 | None:intergenic | 5.0% |
| !!! | TTATTTTTAGTAATAAATAA+AGG | + | tig0027684:20251-20270 | None:intergenic | 5.0% |
| GCTCCAACTCCAATAACCGA+TGG | + | tig0027684:13514-13533 | None:intergenic | 50.0% | |
| TGACGAAATGCACCAACACG+AGG | + | tig0027684:13550-13569 | None:intergenic | 50.0% | |
| ! | ACCGTGTGGTGGAATGTGTT+TGG | - | tig0027684:14765-14784 | Msa1435290:intron | 50.0% |
| !! | GTGGTGATGCATTTTGCAGC+AGG | - | tig0027684:15235-15254 | Msa1435290:intron | 50.0% |
| CAGCTGATGTAGCATTACGG+TGG | - | tig0027684:15267-15286 | Msa1435290:intron | 50.0% | |
| CATTACGGTGGCAGATTTGG+TGG | - | tig0027684:15279-15298 | Msa1435290:intron | 50.0% | |
| !! | TTACGGTGGCAGATTTGGTG+GGG | - | tig0027684:15281-15300 | Msa1435290:intron | 50.0% |
| TTCGTTGCATGCTTTGCGAG+AGG | - | tig0027684:15904-15923 | Msa1435290:intron | 50.0% | |
| CTTTGCGAGAGGTTCATCGA+CGG | - | tig0027684:15915-15934 | Msa1435290:intron | 50.0% | |
| AGAAATGGCTGTACAACGGC+AGG | - | tig0027684:16709-16728 | Msa1435290:intron | 50.0% | |
| CTCCAGATATTGGAGAGGCA+AGG | + | tig0027684:17250-17269 | None:intergenic | 50.0% | |
| AATAAGGAGCCTGGGAACTC+TGG | + | tig0027684:17352-17371 | None:intergenic | 50.0% | |
| TGGCCACCAAATGCGAATAG+GGG | - | tig0027684:17659-17678 | Msa1435290:CDS | 50.0% | |
| TTGCTGCTAAAGACTCGGCA+TGG | + | tig0027684:17871-17890 | None:intergenic | 50.0% | |
| ! | GTGTTGCTGATGCTCTGCAA+GGG | + | tig0027684:17894-17913 | None:intergenic | 50.0% |
| ! | AGTGTTGCTGATGCTCTGCA+AGG | + | tig0027684:17895-17914 | None:intergenic | 50.0% |
| ! | TGCAGAGCATCAGCAACACT+TGG | - | tig0027684:17895-17914 | Msa1435290:intron | 50.0% |
| TTAAGCATGCCTTGCCTGAG+GGG | - | tig0027684:18241-18260 | Msa1435290:CDS | 50.0% | |
| CTTCGCTCTGTTCATGCTAG+TGG | - | tig0027684:18715-18734 | Msa1435290:intron | 50.0% | |
| TTGGGGCAACGTCTTTGAGT+TGG | + | tig0027684:19036-19055 | None:intergenic | 50.0% | |
| CTATCCAAGCACAGAGCAGT+GGG | - | tig0027684:19158-19177 | Msa1435290:intron | 50.0% | |
| ! | ACCCCATCTTCTGGAAAAGC+TGG | - | tig0027684:19410-19429 | Msa1435290:intron | 50.0% |
| CAACTTTACCGTTGCGCCAA+GGG | + | tig0027684:19758-19777 | None:intergenic | 50.0% | |
| AAGGTCACCAGTTCAACTCC+TGG | - | tig0027684:19793-19812 | Msa1435290:intron | 50.0% | |
| TATACGCAGGGTCCAAGAAG+GGG | + | tig0027684:19879-19898 | None:intergenic | 50.0% | |
| CATATACGCAGGGTCCAAGA+AGG | + | tig0027684:19881-19900 | None:intergenic | 50.0% | |
| CTTCTTGGACCCTGCGTATA+TGG | - | tig0027684:19879-19898 | Msa1435290:intron | 50.0% | |
| TAGCACAAAGTGAAGCGGGT+TGG | - | tig0027684:19948-19967 | Msa1435290:intron | 50.0% | |
| GCTCAGAACTTCCGTCAGAA+TGG | + | tig0027684:20586-20605 | None:intergenic | 50.0% | |
| !! | TGCTGATTCTTACACGGCGG+AGG | + | tig0027684:13314-13333 | None:intergenic | 55.0% |
| !! | TACGGTGGCAGATTTGGTGG+GGG | - | tig0027684:15282-15301 | Msa1435290:intron | 55.0% |
| GGTGGGTCTCAACTCCTCTT+TGG | + | tig0027684:15726-15745 | None:intergenic | 55.0% | |
| AGAGGAGTTGAGACCCACCT+TGG | - | tig0027684:15727-15746 | Msa1435290:CDS | 55.0% | |
| GAGGAGTTGAGACCCACCTT+GGG | - | tig0027684:15728-15747 | Msa1435290:CDS | 55.0% | |
| CTGTACAACGGCAGGCTATG+TGG | - | tig0027684:16717-16736 | Msa1435290:intron | 55.0% | |
| ! | TCGTGGGTTATGCGCTGAAG+AGG | - | tig0027684:16772-16791 | Msa1435290:intron | 55.0% |
| AGCAATGGACCAGAGTTCCC+AGG | - | tig0027684:17340-17359 | Msa1435290:CDS | 55.0% | |
| GGCCACCAAATGCGAATAGG+GGG | - | tig0027684:17660-17679 | Msa1435290:CDS | 55.0% | |
| AGCCCCCTATTCGCATTTGG+TGG | + | tig0027684:17665-17684 | None:intergenic | 55.0% | |
| GCACAGGAAGGCAGTTCAAG+TGG | - | tig0027684:17845-17864 | Msa1435290:CDS | 55.0% | |
| !! | GCAACACTTGGCTAGCTTCC+AGG | - | tig0027684:17907-17926 | Msa1435290:intron | 55.0% |
| CCACTGCTCTGTGCTTGGAT+AGG | + | tig0027684:19160-19179 | None:intergenic | 55.0% | |
| CCTATCCAAGCACAGAGCAG+TGG | - | tig0027684:19157-19176 | Msa1435290:intron | 55.0% | |
| GGAAATGTGCAAAGGCGGCA+TGG | - | tig0027684:19431-19450 | Msa1435290:intron | 55.0% | |
| ! | TTTTAGCAAAGGGGGGCCCT+TGG | - | tig0027684:19739-19758 | Msa1435290:intron | 55.0% |
| CCAACTTTACCGTTGCGCCA+AGG | + | tig0027684:19759-19778 | None:intergenic | 55.0% | |
| CCTTGGCGCAACGGTAAAGT+TGG | - | tig0027684:19756-19775 | Msa1435290:intron | 55.0% | |
| !! | GTTGGTGTCGCGTGACTGAA+AGG | - | tig0027684:19774-19793 | Msa1435290:intron | 55.0% |
| ! | AAGAAGGGGCCCCACCATTT+TGG | + | tig0027684:19865-19884 | None:intergenic | 55.0% |
| ! | AAAATGGTGGGGCCCCTTCT+TGG | - | tig0027684:19864-19883 | Msa1435290:intron | 55.0% |
| GACGAGTCCATTAGCATGGG+TGG | + | tig0027684:20905-20924 | None:intergenic | 55.0% | |
| ACCACTCTCAGAGACCGACA+CGG | - | tig0027684:21732-21751 | Msa1435290:CDS | 55.0% | |
| ! | TGTCATTTCAGAGGCTGCCC+AGG | + | tig0027684:21781-21800 | None:intergenic | 55.0% |
| TCCAAGCACAGAGCAGTGGG+AGG | - | tig0027684:19161-19180 | Msa1435290:CDS | 60.0% | |
| TCCTCCCACTGCTCTGTGCT+TGG | + | tig0027684:19165-19184 | None:intergenic | 60.0% | |
| AGCACAGAGCAGTGGGAGGA+TGG | - | tig0027684:19165-19184 | Msa1435290:CDS | 60.0% | |
| TTGGGGGTTGGGTAGGTACC+TGG | - | tig0027684:21058-21077 | Msa1435290:intron | 60.0% | |
| ! | GCCGTGTCGGTCTCTGAGAG+TGG | + | tig0027684:21736-21755 | None:intergenic | 65.0% |
| AAGGGGGGCCCTTGGCGCAA+CGG | - | tig0027684:19747-19766 | Msa1435290:intron | 70.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| tig0027684 | gene | 13155 | 22035 | 13155 | ID=Msa1435290;Name=Msa1435290 |
| tig0027684 | mRNA | 13155 | 22035 | 13155 | ID=Msa1435290-mRNA-1;Parent=Msa1435290;Name=Msa1435290-mRNA-1;_AED=0.08;_eAED=0.08;_QI=275|0.83|0.84|1|0.91|0.92|13|264|707 |
| tig0027684 | exon | 13155 | 13459 | 13155 | ID=Msa1435290-mRNA-1:exon:9596;Parent=Msa1435290-mRNA-1 |
| tig0027684 | exon | 14234 | 14704 | 14234 | ID=Msa1435290-mRNA-1:exon:9595;Parent=Msa1435290-mRNA-1 |
| tig0027684 | exon | 15657 | 15891 | 15657 | ID=Msa1435290-mRNA-1:exon:9594;Parent=Msa1435290-mRNA-1 |
| tig0027684 | exon | 16004 | 16168 | 16004 | ID=Msa1435290-mRNA-1:exon:9593;Parent=Msa1435290-mRNA-1 |
| tig0027684 | exon | 17262 | 17387 | 17262 | ID=Msa1435290-mRNA-1:exon:9592;Parent=Msa1435290-mRNA-1 |
| tig0027684 | exon | 17613 | 17880 | 17613 | ID=Msa1435290-mRNA-1:exon:9591;Parent=Msa1435290-mRNA-1 |
| tig0027684 | exon | 17961 | 18021 | 17961 | ID=Msa1435290-mRNA-1:exon:9590;Parent=Msa1435290-mRNA-1 |
| tig0027684 | exon | 18115 | 18271 | 18115 | ID=Msa1435290-mRNA-1:exon:9589;Parent=Msa1435290-mRNA-1 |
| tig0027684 | exon | 18397 | 18522 | 18397 | ID=Msa1435290-mRNA-1:exon:9588;Parent=Msa1435290-mRNA-1 |
| tig0027684 | exon | 19160 | 19310 | 19160 | ID=Msa1435290-mRNA-1:exon:9587;Parent=Msa1435290-mRNA-1 |
| tig0027684 | exon | 20305 | 20399 | 20305 | ID=Msa1435290-mRNA-1:exon:9586;Parent=Msa1435290-mRNA-1 |
| tig0027684 | exon | 21431 | 21442 | 21431 | ID=Msa1435290-mRNA-1:exon:9585;Parent=Msa1435290-mRNA-1 |
| tig0027684 | exon | 21545 | 22035 | 21545 | ID=Msa1435290-mRNA-1:exon:9584;Parent=Msa1435290-mRNA-1 |
| tig0027684 | five_prime_UTR | 21761 | 22035 | 21761 | ID=Msa1435290-mRNA-1:five_prime_utr;Parent=Msa1435290-mRNA-1 |
| tig0027684 | CDS | 21545 | 21760 | 21545 | ID=Msa1435290-mRNA-1:cds;Parent=Msa1435290-mRNA-1 |
| tig0027684 | CDS | 21431 | 21442 | 21431 | ID=Msa1435290-mRNA-1:cds;Parent=Msa1435290-mRNA-1 |
| tig0027684 | CDS | 20305 | 20399 | 20305 | ID=Msa1435290-mRNA-1:cds;Parent=Msa1435290-mRNA-1 |
| tig0027684 | CDS | 19160 | 19310 | 19160 | ID=Msa1435290-mRNA-1:cds;Parent=Msa1435290-mRNA-1 |
| tig0027684 | CDS | 18397 | 18522 | 18397 | ID=Msa1435290-mRNA-1:cds;Parent=Msa1435290-mRNA-1 |
| tig0027684 | CDS | 18115 | 18271 | 18115 | ID=Msa1435290-mRNA-1:cds;Parent=Msa1435290-mRNA-1 |
| tig0027684 | CDS | 17961 | 18021 | 17961 | ID=Msa1435290-mRNA-1:cds;Parent=Msa1435290-mRNA-1 |
| tig0027684 | CDS | 17613 | 17880 | 17613 | ID=Msa1435290-mRNA-1:cds;Parent=Msa1435290-mRNA-1 |
| tig0027684 | CDS | 17262 | 17387 | 17262 | ID=Msa1435290-mRNA-1:cds;Parent=Msa1435290-mRNA-1 |
| tig0027684 | CDS | 16004 | 16168 | 16004 | ID=Msa1435290-mRNA-1:cds;Parent=Msa1435290-mRNA-1 |
| tig0027684 | CDS | 15657 | 15891 | 15657 | ID=Msa1435290-mRNA-1:cds;Parent=Msa1435290-mRNA-1 |
| tig0027684 | CDS | 14234 | 14704 | 14234 | ID=Msa1435290-mRNA-1:cds;Parent=Msa1435290-mRNA-1 |
| tig0027684 | CDS | 13419 | 13459 | 13419 | ID=Msa1435290-mRNA-1:cds;Parent=Msa1435290-mRNA-1 |
| tig0027684 | three_prime_UTR | 13155 | 13418 | 13155 | ID=Msa1435290-mRNA-1:three_prime_utr;Parent=Msa1435290-mRNA-1 |
| Gene Sequence |
| Protein sequence |
