Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1460880 | XP_013451388.1 | 99.282 | 557 | 3 | 1 | 1 | 557 | 1 | 556 | 0.0 | 1129 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1460880 | sp|Q94BP7|AUG6_ARATH | 76.977 | 569 | 107 | 6 | 1 | 549 | 1 | 565 | 0.0 | 842 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1460880 | A0A072U8L1 | 99.282 | 557 | 3 | 1 | 1 | 557 | 1 | 556 | 0.0 | 1129 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0028340 | Msa1460880 | 0.810575 | 1.076649e-50 | -8.615850e-47 |
| Msa0035320 | Msa1460880 | 0.812097 | 5.033116e-51 | -8.615850e-47 |
| Msa0047640 | Msa1460880 | 0.810595 | 1.065908e-50 | -8.615850e-47 |
| Msa0054530 | Msa1460880 | 0.802930 | 4.441685e-49 | -8.615850e-47 |
| Msa0076170 | Msa1460880 | 0.818765 | 1.652038e-52 | -8.615850e-47 |
| Msa0089980 | Msa1460880 | 0.828998 | 6.580022e-55 | -8.615850e-47 |
| Msa0090010 | Msa1460880 | 0.825221 | 5.274640e-54 | -8.615850e-47 |
| Msa0092940 | Msa1460880 | 0.813643 | 2.307590e-51 | -8.615850e-47 |
| Msa1393820 | Msa1460880 | 0.836539 | 8.820441e-57 | -8.615850e-47 |
| Msa1435290 | Msa1460880 | 0.880134 | 7.049883e-70 | -8.615850e-47 |
| Msa1459910 | Msa1460880 | 0.803802 | 2.929899e-49 | -8.615850e-47 |
| Msa1460880 | Msa1464370 | 0.823764 | 1.161834e-53 | -8.615850e-47 |
| Msa0608270 | Msa1460880 | 0.803701 | 3.074477e-49 | -8.615850e-47 |
| Msa0615060 | Msa1460880 | 0.813143 | 2.971062e-51 | -8.615850e-47 |
| Msa0626270 | Msa1460880 | 0.850378 | 1.765447e-60 | -8.615850e-47 |
| Msa0626460 | Msa1460880 | 0.815263 | 1.011188e-51 | -8.615850e-47 |
| Msa0648830 | Msa1460880 | 0.803686 | 3.096763e-49 | -8.615850e-47 |
| Msa0664540 | Msa1460880 | 0.802110 | 6.552700e-49 | -8.615850e-47 |
| Msa0691340 | Msa1460880 | 0.811587 | 6.499622e-51 | -8.615850e-47 |
| Msa0698100 | Msa1460880 | 0.806090 | 9.737368e-50 | -8.615850e-47 |
| Msa0749400 | Msa1460880 | 0.815109 | 1.094194e-51 | -8.615850e-47 |
| Msa0784220 | Msa1460880 | 0.810916 | 9.083428e-51 | -8.615850e-47 |
| Msa0168570 | Msa1460880 | 0.819696 | 1.014085e-52 | -8.615850e-47 |
| Msa0186410 | Msa1460880 | 0.822514 | 2.274958e-53 | -8.615850e-47 |
| Msa0225480 | Msa1460880 | 0.802591 | 5.215975e-49 | -8.615850e-47 |
| Msa1254620 | Msa1460880 | 0.824292 | 8.735999e-54 | -8.615850e-47 |
| Msa1267040 | Msa1460880 | 0.818997 | 1.463399e-52 | -8.615850e-47 |
| Msa1267170 | Msa1460880 | 0.812530 | 4.048047e-51 | -8.615850e-47 |
| Msa0382360 | Msa1460880 | 0.812381 | 4.362347e-51 | -8.615850e-47 |
| Msa0476690 | Msa1460880 | 0.801408 | 9.134128e-49 | -8.615850e-47 |
| Msa1031390 | Msa1460880 | 0.806561 | 7.747765e-50 | -8.615850e-47 |
| Msa1055200 | Msa1460880 | 0.824301 | 8.694413e-54 | -8.615850e-47 |
| Msa1095790 | Msa1460880 | 0.826085 | 3.291137e-54 | -8.615850e-47 |
| Msa0268110 | Msa1460880 | 0.811841 | 5.721922e-51 | -8.615850e-47 |
| Msa0544730 | Msa1460880 | 0.804292 | 2.317196e-49 | -8.615850e-47 |
| Msa0586450 | Msa1460880 | 0.808199 | 3.483391e-50 | -8.615850e-47 |
| Msa0597770 | Msa1460880 | 0.805659 | 1.199796e-49 | -8.615850e-47 |
| Msa0959520 | Msa1460880 | 0.807825 | 4.184197e-50 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1460880 | MtrunA17_Chr6g0458901 | 99.282 | 557 | 3 | 1 | 1 | 557 | 1 | 556 | 0.0 | 1129 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1460880 | AT5G40740.1 | 76.977 | 569 | 107 | 6 | 1 | 549 | 1 | 565 | 0.0 | 842 |
Find 133 sgRNAs with CRISPR-Local
Find 401 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| CCAGATGAAGTGATTGTTTA+TGG | 0.084032 | tig0041113:+2196 | Msa1460880:intergenic |
| AGCAACTGTTCTCCTAATTT+AGG | 0.165566 | tig0041113:+6175 | Msa1460880:intergenic |
| CGTCATTCCAACCCTAAATT+AGG | 0.205234 | tig0041113:-6187 | Msa1460880:CDS |
| CTTAAGAAATAAAGTTAAAT+TGG | 0.212850 | tig0041113:-2798 | Msa1460880:CDS |
| TTTCTAAGGCTACTCGTCTA+TGG | 0.240376 | tig0041113:-2721 | Msa1460880:CDS |
| GCAGGCTATGTGGTCTAATT+TGG | 0.242822 | tig0041113:-3025 | Msa1460880:CDS |
| GAGTAGCCTTAGAAACTAAA+TGG | 0.258741 | tig0041113:+2729 | Msa1460880:intergenic |
| GCAACTGTTCTCCTAATTTA+GGG | 0.260315 | tig0041113:+6176 | Msa1460880:intergenic |
| TCTTTCTGTTAGTAAATCTT+TGG | 0.270475 | tig0041113:-268 | Msa1460880:CDS |
| TATACGAATTGTTTGTTGTT+AGG | 0.271466 | tig0041113:-6271 | Msa1460880:CDS |
| GAATTCCCATTTAGTTTCTA+AGG | 0.282446 | tig0041113:-2735 | Msa1460880:CDS |
| TTTAGCATGACCCCATCTTC+TGG | 0.297372 | tig0041113:-351 | Msa1460880:CDS |
| CCTTATTCAGATGTATTATC+TGG | 0.303449 | tig0041113:-2387 | Msa1460880:CDS |
| ATCATCAATACCTTTGTAAC+TGG | 0.311875 | tig0041113:+3733 | Msa1460880:intergenic |
| GAAACCCTCGAATTGCTTCT+AGG | 0.319495 | tig0041113:+4916 | Msa1460880:intergenic |
| GCAACACTTGGCTAGCTTCC+AGG | 0.335028 | tig0041113:-1845 | Msa1460880:intron |
| GATATGGACTTCTGAATTGT+TGG | 0.351406 | tig0041113:+700 | Msa1460880:intergenic |
| TAACAGAAAGATTCTCTGTT+TGG | 0.354609 | tig0041113:+280 | Msa1460880:intergenic |
| TGTGCACTACGCAATATATC+TGG | 0.373608 | tig0041113:+1925 | Msa1460880:intergenic |
| CCAGATAATACATCTGAATA+AGG | 0.383601 | tig0041113:+2387 | Msa1460880:intergenic |
| TTGTTGTCTGTTTGCACTGA+AGG | 0.388031 | tig0041113:+2348 | Msa1460880:intergenic |
| GGTTTGGATCCATCGGTTAT+TGG | 0.388081 | tig0041113:-6250 | Msa1460880:CDS |
| CAACACGAAGTTCTTGCATC+AGG | 0.388473 | tig0041113:-2581 | Msa1460880:CDS |
| TCCTCCCACTGCTCTGTGCT+TGG | 0.391586 | tig0041113:+590 | Msa1460880:intergenic |
| CTTGCTACTTCATTATTTGA+AGG | 0.392697 | tig0041113:+240 | Msa1460880:intergenic |
| GAATTGTTTGTTGTTAGGTT+TGG | 0.393697 | tig0041113:-6266 | Msa1460880:CDS |
| CAATAGATGTGGAGTTAGAT+TGG | 0.394612 | tig0041113:+645 | Msa1460880:intergenic |
| ATATGGACTTCTGAATTGTT+GGG | 0.399785 | tig0041113:+701 | Msa1460880:intergenic |
| GGCTTATTTACAACAAGAGT+TGG | 0.415735 | tig0041113:-2834 | Msa1460880:CDS |
| TTTAGGCAAAAGATTTCGTT+GGG | 0.418344 | tig0041113:-187 | Msa1460880:CDS |
| TGTAGGATTTCGATAAGGTT+TGG | 0.422333 | tig0041113:-6009 | Msa1460880:intron |
| GATGTATTATCTGGTGACTC+TGG | 0.426370 | tig0041113:-2378 | Msa1460880:CDS |
| TCGACATAGCAGAAGTTATA+CGG | 0.429647 | tig0041113:-2245 | Msa1460880:CDS |
| ACCCCATCTTCTGGAAAAGC+TGG | 0.430284 | tig0041113:-342 | Msa1460880:CDS |
| ATCATCTCTGCTTGCAGCAA+TGG | 0.433791 | tig0041113:-2427 | Msa1460880:CDS |
| ACAACAGTGGATGACAGAAA+TGG | 0.435162 | tig0041113:-2285 | Msa1460880:CDS |
| CCATAAACAATCACTTCATC+TGG | 0.439575 | tig0041113:-2196 | Msa1460880:intron |
| TTTAATATTATTCAGGAAAG+TGG | 0.440808 | tig0041113:-468 | Msa1460880:intron |
| GATCCATCGGTTATTGGAGT+TGG | 0.448342 | tig0041113:-6244 | Msa1460880:CDS |
| TGAGCTATCAAGTCTTCAAT+AGG | 0.448471 | tig0041113:+2557 | Msa1460880:intergenic |
| CTTCTGCTATGTCGACAGTT+TGG | 0.451412 | tig0041113:+2253 | Msa1460880:intergenic |
| CAGTGCAAACAGACAACAAA+GGG | 0.452160 | tig0041113:-2344 | Msa1460880:CDS |
| GTCATCACCTTCTTCTCATA+CGG | 0.456768 | tig0041113:+6340 | Msa1460880:intergenic |
| TTCAAAACCGTATGAGAAGA+AGG | 0.459620 | tig0041113:-6347 | Msa1460880:five_prime_UTR |
| ATGTATTATCTGGTGACTCT+GGG | 0.464027 | tig0041113:-2377 | Msa1460880:CDS |
| AGAAAGATTCTCTGTTTGGC+TGG | 0.464368 | tig0041113:+284 | Msa1460880:intergenic |
| TGAAGACTTGATAGCTCATC+GGG | 0.467705 | tig0041113:-2552 | Msa1460880:CDS |
| CAACAGTGGATGACAGAAAT+GGG | 0.469316 | tig0041113:-2284 | Msa1460880:CDS |
| TCTTCGCTTGCTACTTGTTG+TGG | 0.469798 | tig0041113:-4895 | Msa1460880:CDS |
| CTTGGATAGGTGATGTTGAC+TGG | 0.474209 | tig0041113:+608 | Msa1460880:intergenic |
| GACAACAAAGGGGAGATTGA+TGG | 0.475380 | tig0041113:-2333 | Msa1460880:CDS |
| TTGCTACTTGTTGTGGACCT+AGG | 0.481963 | tig0041113:-4888 | Msa1460880:intron |
| TGCTGATTCTTACACGGCGG+AGG | 0.483016 | tig0041113:+6441 | Msa1460880:intergenic |
| AGAAATAAAGTTAAATTGGA+AGG | 0.485157 | tig0041113:-2794 | Msa1460880:CDS |
| AATAAGGAGCCTGGGAACTC+TGG | 0.489763 | tig0041113:+2403 | Msa1460880:intergenic |
| TACTGATGATGTTGGTGAGT+TGG | 0.491187 | tig0041113:-445 | Msa1460880:CDS |
| GATTGAGCGGAATCGAAAAT+CGG | 0.498887 | tig0041113:+5986 | Msa1460880:intergenic |
| TTCTAAGGCTACTCGTCTAT+GGG | 0.504439 | tig0041113:-2720 | Msa1460880:CDS |
| ATACATCTGAATAAGGAGCC+TGG | 0.504604 | tig0041113:+2394 | Msa1460880:intergenic |
| GTTGTTAGGTTTGGATCCAT+CGG | 0.507053 | tig0041113:-6257 | Msa1460880:CDS |
| GATCTTGTAGGATTTCGATA+AGG | 0.507445 | tig0041113:-6014 | Msa1460880:intron |
| AGATATATTGCGTAGTGCAC+AGG | 0.507579 | tig0041113:-1923 | Msa1460880:CDS |
| AGTAGCCTTAGAAACTAAAT+GGG | 0.511302 | tig0041113:+2730 | Msa1460880:intergenic |
| CCACTGCTCTGTGCTTGGAT+AGG | 0.512315 | tig0041113:+595 | Msa1460880:intergenic |
| AGTGTTGCTGATGCTCTGCA+AGG | 0.515631 | tig0041113:+1860 | Msa1460880:intergenic |
| CTGTTCTCCTAATTTAGGGT+TGG | 0.516338 | tig0041113:+6180 | Msa1460880:intergenic |
| TTAAATTGGAAGGAGAACTC+TGG | 0.520800 | tig0041113:-2784 | Msa1460880:CDS |
| CACTTCCTAGAAGCAATTCG+AGG | 0.523420 | tig0041113:-4921 | Msa1460880:CDS |
| CAAGAATAGCCCTTGAAAGA+AGG | 0.526000 | tig0041113:-3083 | Msa1460880:CDS |
| TACATCTGAATAAGGAGCCT+GGG | 0.531473 | tig0041113:+2395 | Msa1460880:intergenic |
| GGCAAAAGCAAATGATGGAG+AGG | 0.532581 | tig0041113:-1950 | Msa1460880:CDS |
| TTCATTCTCTCTTCTCTCAG+AGG | 0.536778 | tig0041113:-6148 | Msa1460880:CDS |
| TAAATTGGAAGGAGAACTCT+GGG | 0.537321 | tig0041113:-2783 | Msa1460880:CDS |
| GCAGAGATGATCCAGAGATT+CGG | 0.538579 | tig0041113:+2439 | Msa1460880:intergenic |
| AGCACAGAGCAGTGGGAGGA+TGG | 0.538880 | tig0041113:-587 | Msa1460880:intron |
| TCAGTCAATGGTGTAGGCAA+TGG | 0.542136 | tig0041113:+3787 | Msa1460880:intergenic |
| TTGGGGCAACGTCTTTGAGT+TGG | 0.543115 | tig0041113:+719 | Msa1460880:intergenic |
| CTGCAGGCAAAAGCAAATGA+TGG | 0.545593 | tig0041113:-1955 | Msa1460880:intron |
| TGCAGAGCATCAGCAACACT+TGG | 0.546152 | tig0041113:-1857 | Msa1460880:CDS |
| AGAAATGGCTGTACAACGGC+AGG | 0.547477 | tig0041113:-3043 | Msa1460880:CDS |
| ACGAAAATCACGTGATTGAG+CGG | 0.551126 | tig0041113:+5973 | Msa1460880:intergenic |
| TTGAAGACTTGATAGCTCAT+CGG | 0.558421 | tig0041113:-2553 | Msa1460880:CDS |
| TGATAGCTCATCGGGAACAT+AGG | 0.563175 | tig0041113:-2544 | Msa1460880:intron |
| CTGTACAACGGCAGGCTATG+TGG | 0.563872 | tig0041113:-3035 | Msa1460880:CDS |
| TTCGTTGCATGCTTTGCGAG+AGG | 0.564868 | tig0041113:-3848 | Msa1460880:CDS |
| TTCAGTAGAGACCCAAAGGA+TGG | 0.565729 | tig0041113:+154 | Msa1460880:intergenic |
| ATGATTTGCTGATTCTTACA+CGG | 0.568361 | tig0041113:+6435 | Msa1460880:intergenic |
| GTCTAATGTTCAGCTTGACA+AGG | 0.569976 | tig0041113:-412 | Msa1460880:CDS |
| TAGCAGAAGTTATACGGCGT+TGG | 0.571529 | tig0041113:-2239 | Msa1460880:CDS |
| GTGTTGCTGATGCTCTGCAA+GGG | 0.575027 | tig0041113:+1861 | Msa1460880:intergenic |
| TCGTGGGTTATGCGCTGAAG+AGG | 0.577434 | tig0041113:-2980 | Msa1460880:intron |
| AACACGAAGTTCTTGCATCA+GGG | 0.582629 | tig0041113:-2580 | Msa1460880:CDS |
| ATTAGTGAGCTTGAGTCGCA+AGG | 0.584697 | tig0041113:-4946 | Msa1460880:CDS |
| AGCAATGGACCAGAGTTCCC+AGG | 0.591813 | tig0041113:-2412 | Msa1460880:CDS |
| GCTACATCAGTCAATGGTGT+AGG | 0.593033 | tig0041113:+3781 | Msa1460880:intergenic |
| CTATCCAAGCACAGAGCAGT+GGG | 0.596823 | tig0041113:-594 | Msa1460880:CDS |
| AATGAAGTAGCAAGTTCAGA+AGG | 0.597448 | tig0041113:-231 | Msa1460880:CDS |
| GGAAATGTGCAAAGGCGGCA+TGG | 0.602198 | tig0041113:-321 | Msa1460880:CDS |
| TGATGTCTGTTCAATAGATG+TGG | 0.605141 | tig0041113:+634 | Msa1460880:intergenic |
| GCACAGGAAGGCAGTTCAAG+TGG | 0.607060 | tig0041113:-1907 | Msa1460880:CDS |
| TAGATGTGGAGTTAGATTGG+AGG | 0.607973 | tig0041113:+648 | Msa1460880:intergenic |
| TCGAATTCAACTCCTCGTGT+TGG | 0.609098 | tig0041113:-6217 | Msa1460880:CDS |
| GCAATTCAGTAGAGACCCAA+AGG | 0.611918 | tig0041113:+150 | Msa1460880:intergenic |
| TACTCTACTTCCAGTTACAA+AGG | 0.612956 | tig0041113:-3743 | Msa1460880:intron |
| ACTTCCTAGAAGCAATTCGA+GGG | 0.613484 | tig0041113:-4920 | Msa1460880:CDS |
| TCATCGACGGACATTTACTT+CGG | 0.615640 | tig0041113:-3824 | Msa1460880:CDS |
| CCTATCCAAGCACAGAGCAG+TGG | 0.620587 | tig0041113:-595 | Msa1460880:CDS |
| AAATGACTGCTGAATTTCGT+GGG | 0.627185 | tig0041113:-2996 | Msa1460880:CDS |
| GCTCCAACTCCAATAACCGA+TGG | 0.628118 | tig0041113:+6241 | Msa1460880:intergenic |
| GAGAATGCTACATCAGTCAA+TGG | 0.628328 | tig0041113:+3775 | Msa1460880:intergenic |
| TTGCTGCTAAAGACTCGGCA+TGG | 0.629858 | tig0041113:+1884 | Msa1460880:intergenic |
| GAAATGACTGCTGAATTTCG+TGG | 0.630062 | tig0041113:-2997 | Msa1460880:CDS |
| TAGGCAAAAGATTTCGTTGG+GGG | 0.630770 | tig0041113:-185 | Msa1460880:CDS |
| AGATAATGAGATGTGAAATG+TGG | 0.631846 | tig0041113:+6468 | Msa1460880:intergenic |
| AAGCTGGAAATGTGCAAAGG+CGG | 0.635206 | tig0041113:-326 | Msa1460880:CDS |
| TATGGACTTCTGAATTGTTG+GGG | 0.637998 | tig0041113:+702 | Msa1460880:intergenic |
| TGAGAAGAAGGTGATGACGA+TGG | 0.654702 | tig0041113:-6335 | Msa1460880:exon |
| GCAAAAGCAAATGATGGAGA+GGG | 0.656393 | tig0041113:-1949 | Msa1460880:CDS |
| GAAAAGCTGGAAATGTGCAA+AGG | 0.664998 | tig0041113:-329 | Msa1460880:CDS |
| TGTATTATCTGGTGACTCTG+GGG | 0.667191 | tig0041113:-2376 | Msa1460880:CDS |
| GAAAGTGGTACTGATGATGT+TGG | 0.668310 | tig0041113:-453 | Msa1460880:CDS |
| ATGCAGAAATGGCTGTACAA+CGG | 0.671114 | tig0041113:-3047 | Msa1460880:CDS |
| AAGGGTTGCTGCTAAAGACT+CGG | 0.676383 | tig0041113:+1879 | Msa1460880:intergenic |
| TCAGTGCAAACAGACAACAA+AGG | 0.677596 | tig0041113:-2345 | Msa1460880:CDS |
| TTAGGCAAAAGATTTCGTTG+GGG | 0.678223 | tig0041113:-186 | Msa1460880:CDS |
| TCCAAGCACAGAGCAGTGGG+AGG | 0.679082 | tig0041113:-591 | Msa1460880:CDS |
| CAGTGAGACATTGACAACAG+TGG | 0.682842 | tig0041113:-2298 | Msa1460880:CDS |
| TGACGAAATGCACCAACACG+AGG | 0.689545 | tig0041113:+6205 | Msa1460880:intergenic |
| GGGGTCATGCTAAATAACTG+AGG | 0.693513 | tig0041113:+360 | Msa1460880:intergenic |
| ATATTGCGTAGTGCACAGGA+AGG | 0.709357 | tig0041113:-1919 | Msa1460880:CDS |
| CTTTGCGAGAGGTTCATCGA+CGG | 0.712815 | tig0041113:-3837 | Msa1460880:CDS |
| AGTGCAAACAGACAACAAAG+GGG | 0.761282 | tig0041113:-2343 | Msa1460880:CDS |
| ATTTGCTGATTCTTACACGG+CGG | 0.762268 | tig0041113:+6438 | Msa1460870:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | ATTATATTATATTTTTTAAT+TGG | - | tig0041113:3557-3576 | Msa1460880:intron | 0.0% |
| !!! | TTTTGTTTTTATATTAGAAT+CGG | - | tig0041113:2749-2768 | Msa1460880:CDS | 10.0% |
| !!! | AAAATGAATTATTTTACTTT+GGG | + | tig0041113:3220-3239 | Msa1460880:intergenic | 10.0% |
| !! | ACAAAAATAATTATAATATC+AGG | - | tig0041113:5383-5402 | Msa1460880:intron | 10.0% |
| !! | AAACAACTTAATTAATATTT+AGG | - | tig0041113:5415-5434 | Msa1460880:intron | 10.0% |
| !!! | TATCAATTTTAATATTATTC+AGG | - | tig0041113:6262-6281 | Msa1460880:CDS | 10.0% |
| !!! | GGAAAAATAAGTTTTATTTA+GGG | - | tig0041113:1961-1980 | Msa1460880:intron | 15.0% |
| !!! | GAAAAATAAGTTTTATTTAG+GGG | - | tig0041113:1962-1981 | Msa1460880:intron | 15.0% |
| !! | AACACTAATAAATTGAAAAA+AGG | + | tig0041113:1992-2011 | Msa1460880:intergenic | 15.0% |
| !! | TTATTAGTATTGTATATTGT+TGG | - | tig0041113:2010-2029 | Msa1460880:intron | 15.0% |
| !!! | CAAAATGAATTATTTTACTT+TGG | + | tig0041113:3221-3240 | Msa1460880:intergenic | 15.0% |
| !! | ATAAAATGACAAATAATTTG+AGG | - | tig0041113:3369-3388 | Msa1460880:intron | 15.0% |
| !! | CTTAAGAAATAAAGTTAAAT+TGG | - | tig0041113:3939-3958 | Msa1460880:intron | 15.0% |
| !! | TTAATTAATATTTAGGTGTT+TGG | - | tig0041113:5422-5441 | Msa1460880:intron | 15.0% |
| !! | TAATTAATATTTAGGTGTTT+GGG | - | tig0041113:5423-5442 | Msa1460880:intron | 15.0% |
| !! | CAAAAGCTAAATATTAATTA+AGG | + | tig0041113:5511-5530 | Msa1460880:intergenic | 15.0% |
| !!! | AATTAATATTTAGCTTTTGA+AGG | - | tig0041113:5512-5531 | Msa1460880:intron | 15.0% |
| !! | GACAATATATCAATATTTAT+CGG | + | tig0041113:5659-5678 | Msa1460880:intergenic | 15.0% |
| !!! | TTTAGGATTTCTAAATTATA+CGG | - | tig0041113:5811-5830 | Msa1460880:intron | 15.0% |
| !!! | TTTAGGATTTCTAAATTATA+CGG | - | tig0041113:5811-5830 | Msa1460880:intron | 15.0% |
| !!! | TTTTGTTTTCATGATTTTTT+AGG | - | tig0041113:6533-6552 | Msa1460880:five_prime_UTR | 15.0% |
| !!! | AATACTTTTGAAGATTGAAT+TGG | + | tig0041113:616-635 | Msa1460880:intergenic | 20.0% |
| !!! | GTTTAACTTGTTTTTTTGTT+TGG | - | tig0041113:701-720 | Msa1460880:CDS | 20.0% |
| !!! | TGATTATGTAAAATTGATTC+TGG | - | tig0041113:838-857 | Msa1460880:intron | 20.0% |
| !!! | AAAATTGATTCTGATATGTT+TGG | - | tig0041113:986-1005 | Msa1460880:intron | 20.0% |
| !! | AATATAAAGTGATGCATATT+TGG | + | tig0041113:1272-1291 | Msa1460880:intergenic | 20.0% |
| !!! | TTATATTCAACTCACTTTTA+AGG | - | tig0041113:1285-1304 | Msa1460880:intron | 20.0% |
| !!! | TATATTCAACTCACTTTTAA+GGG | - | tig0041113:1286-1305 | Msa1460880:intron | 20.0% |
| !! | AATTAGAACTTATGATTTCT+AGG | - | tig0041113:1385-1404 | Msa1460880:intron | 20.0% |
| !! | TTAAACTTTAAGTGTATGTT+TGG | + | tig0041113:1504-1523 | Msa1460880:intergenic | 20.0% |
| !!! | AAATGTTTTTAATGATCTGA+CGG | - | tig0041113:1615-1634 | Msa1460880:intron | 20.0% |
| !! | TTCACAACAGAATAAAAAAA+TGG | + | tig0041113:1695-1714 | Msa1460880:intergenic | 20.0% |
| !!! | AATTGAAATTTGAATGGATT+TGG | - | tig0041113:1713-1732 | Msa1460880:intron | 20.0% |
| !!! | TGTATTTTAGTTCATTGTTT+TGG | - | tig0041113:1939-1958 | Msa1460880:CDS | 20.0% |
| !!! | GTATTTTAGTTCATTGTTTT+GGG | - | tig0041113:1940-1959 | Msa1460880:CDS | 20.0% |
| !!! | GGGAAAAATAAGTTTTATTT+AGG | - | tig0041113:1960-1979 | Msa1460880:intron | 20.0% |
| !!! | CCATATTTTTCTTAGATAAT+AGG | + | tig0041113:2502-2521 | Msa1460880:intergenic | 20.0% |
| !! | CCTATTATCTAAGAAAAATA+TGG | - | tig0041113:2499-2518 | Msa1460880:intron | 20.0% |
| !! | TTAGAACTAAATCCTTTAAA+TGG | + | tig0041113:2663-2682 | Msa1460880:intergenic | 20.0% |
| !!! | TTAAAGGATTTAGTTCTAAA+TGG | - | tig0041113:2664-2683 | Msa1460880:intron | 20.0% |
| !!! | AATCCAATCCATAAAATTTT+AGG | - | tig0041113:3027-3046 | Msa1460880:CDS | 20.0% |
| !!! | TATCCTAAAATTTTATGGAT+TGG | + | tig0041113:3033-3052 | Msa1460880:intergenic | 20.0% |
| !!! | CATTCTATCCTAAAATTTTA+TGG | + | tig0041113:3038-3057 | Msa1460880:intergenic | 20.0% |
| !!! | CAAAATAACAGTTATCTTTT+TGG | - | tig0041113:3121-3140 | Msa1460880:intron | 20.0% |
| !!! | AATTATTTTACTTTGGGAAT+GGG | + | tig0041113:3214-3233 | Msa1460880:intergenic | 20.0% |
| !! | ACTTGAGATACAAATAAATA+AGG | - | tig0041113:3302-3321 | Msa1460880:intron | 20.0% |
| !! | AAATAAGGATGTTATGTTAT+CGG | - | tig0041113:3317-3336 | Msa1460880:intron | 20.0% |
| !! | GAACTATATGTAAATAAACT+TGG | + | tig0041113:3808-3827 | Msa1460880:intergenic | 20.0% |
| !! | AGAAATAAAGTTAAATTGGA+AGG | - | tig0041113:3943-3962 | Msa1460880:intron | 20.0% |
| !! | CCTAAAATTTATGTACAAAA+TGG | + | tig0041113:4276-4295 | Msa1460880:intergenic | 20.0% |
| !!! | CCATTTTGTACATAAATTTT+AGG | - | tig0041113:4273-4292 | Msa1460880:intron | 20.0% |
| !! | ATGACAAATAGAAAATGAAA+CGG | + | tig0041113:4981-5000 | Msa1460880:intergenic | 20.0% |
| !! | TAATTATAATATCAGGTGTT+TGG | - | tig0041113:5390-5409 | Msa1460880:intron | 20.0% |
| !! | AATTATAATATCAGGTGTTT+GGG | - | tig0041113:5391-5410 | Msa1460880:intron | 20.0% |
| !! | AAGCTAAATATTAATTAAGG+AGG | + | tig0041113:5508-5527 | Msa1460880:intergenic | 20.0% |
| !! | TTTAATATTATTCAGGAAAG+TGG | - | tig0041113:6269-6288 | Msa1460880:CDS | 20.0% |
| !!! | TATACGAATTGTTTGTTGTT+AGG | - | tig0041113:466-485 | Msa1460880:intron | 25.0% |
| !!! | TTTTTTTGTTTGGATCTTGT+AGG | - | tig0041113:711-730 | Msa1460880:CDS | 25.0% |
| !!! | GTAAGGATTTGTCATTTTTT+TGG | - | tig0041113:790-809 | Msa1460880:intron | 25.0% |
| !! | AGTGATTTATGTTTGAAATG+TGG | - | tig0041113:882-901 | Msa1460880:intron | 25.0% |
| !!! | AAGTGGTTTATGTTTTGAAT+TGG | - | tig0041113:1020-1039 | Msa1460880:intron | 25.0% |
| !!! | AGTGGTTTATGTTTTGAATT+GGG | - | tig0041113:1021-1040 | Msa1460880:intron | 25.0% |
| !! | TCAAGTAGAATTAATTTTGG+AGG | + | tig0041113:1174-1193 | Msa1460880:intergenic | 25.0% |
| !! | GCTTCAAGTAGAATTAATTT+TGG | + | tig0041113:1177-1196 | Msa1460880:intergenic | 25.0% |
| !!! | TTTAGTTTATGTTGGTTCTA+CGG | + | tig0041113:1341-1360 | Msa1460880:intergenic | 25.0% |
| !! | CACTCAAATTTAGTTTATGT+TGG | + | tig0041113:1349-1368 | Msa1460880:intergenic | 25.0% |
| !!! | AGAACTGATTTTGATATGTT+TGG | + | tig0041113:1442-1461 | Msa1460880:intergenic | 25.0% |
| ! | GTTGTGAATTGAAATTTGAA+TGG | - | tig0041113:1707-1726 | Msa1460880:intron | 25.0% |
| ! | AGTCAAAACTAAATCAAACT+AGG | + | tig0041113:2036-2055 | Msa1460880:intergenic | 25.0% |
| ! | TGGATTATTCAATATTCATG+AGG | - | tig0041113:2412-2431 | Msa1460880:CDS | 25.0% |
| ! | TGTGTAAAATAGTTAATCAC+TGG | - | tig0041113:2530-2549 | Msa1460880:intron | 25.0% |
| ! | CATTAAGTGAAACCATTTAA+AGG | - | tig0041113:2648-2667 | Msa1460880:intron | 25.0% |
| !! | AAAATAGAAATCTTTTCCCA+AGG | + | tig0041113:2732-2751 | Msa1460880:intergenic | 25.0% |
| ! | TTGAATGTTCATGTTAATGT+AGG | - | tig0041113:2843-2862 | Msa1460880:intron | 25.0% |
| ! | AAACAACACTTAATATGAGA+TGG | + | tig0041113:3153-3172 | Msa1460880:intergenic | 25.0% |
| !!! | CTCATATTAAGTGTTGTTTA+AGG | - | tig0041113:3154-3173 | Msa1460880:intron | 25.0% |
| !!! | GAATTATTTTACTTTGGGAA+TGG | + | tig0041113:3215-3234 | Msa1460880:intergenic | 25.0% |
| ! | AATAAGGATGTTATGTTATC+GGG | - | tig0041113:3318-3337 | Msa1460880:intron | 25.0% |
| ! | TAAAAACTTCCTTCTTTCAA+GGG | + | tig0041113:3666-3685 | Msa1460880:intergenic | 25.0% |
| !!! | GTTTTTAGAAAATGCAGAAA+TGG | - | tig0041113:3679-3698 | Msa1460880:intron | 25.0% |
| ! | ATAATGTAAAACCTGAATTC+AGG | - | tig0041113:3882-3901 | Msa1460880:intron | 25.0% |
| ! | GTTTACAAATTCTCCTTTAA+AGG | - | tig0041113:4570-4589 | Msa1460880:intron | 25.0% |
| ! | AATAGTGTCAAAAATCATTG+AGG | + | tig0041113:5090-5109 | Msa1460880:intergenic | 25.0% |
| !! | ACACTATTTAGTTGATCTTT+TGG | - | tig0041113:5102-5121 | Msa1460880:intron | 25.0% |
| !!! | TGGAAACTTAACTTTTGTTT+TGG | - | tig0041113:5158-5177 | Msa1460880:intron | 25.0% |
| !!! | GGAAACTTAACTTTTGTTTT+GGG | - | tig0041113:5159-5178 | Msa1460880:intron | 25.0% |
| !!! | GAAACTTAACTTTTGTTTTG+GGG | - | tig0041113:5160-5179 | Msa1460880:intron | 25.0% |
| ! | TATAAGAAGCTGTTAACAAA+GGG | + | tig0041113:5337-5356 | Msa1460880:intergenic | 25.0% |
| ! | ATATAAGAAGCTGTTAACAA+AGG | + | tig0041113:5338-5357 | Msa1460880:intergenic | 25.0% |
| !!! | TAATATTTAGCTTTTGAAGG+AGG | - | tig0041113:5515-5534 | Msa1460880:intron | 25.0% |
| !!! | AATATTTAGCTTTTGAAGGA+GGG | - | tig0041113:5516-5535 | Msa1460880:intron | 25.0% |
| !!! | TTGATAAGTATCGAATCAAT+CGG | + | tig0041113:5546-5565 | Msa1460880:intergenic | 25.0% |
| !! | TGATTTTATCAATTACTTGC+TGG | - | tig0041113:5628-5647 | Msa1460880:intron | 25.0% |
| ! | AGTATATGAACAGTAATTAC+AGG | + | tig0041113:5749-5768 | Msa1460880:intergenic | 25.0% |
| !! | ACATTGTTGCATTTTTCTTT+AGG | - | tig0041113:5794-5813 | Msa1460880:intron | 25.0% |
| ! | AGTATATGAACAGTAATTAC+AGG | + | tig0041113:5749-5768 | Msa1460880:intergenic | 25.0% |
| !! | ACATTGTTGCATTTTTCTTT+AGG | - | tig0041113:5794-5813 | Msa1460880:intron | 25.0% |
| ! | AGTATATGAACAGTAATTAC+AGG | + | tig0041113:5749-5768 | Msa1460880:intergenic | 25.0% |
| ! | TCTTTCTGTTAGTAAATCTT+TGG | - | tig0041113:6469-6488 | Msa1460880:five_prime_UTR | 25.0% |
| AGATAATGAGATGTGAAATG+TGG | + | tig0041113:272-291 | Msa1460880:intergenic | 30.0% | |
| !! | ATGATTTGCTGATTCTTACA+CGG | + | tig0041113:305-324 | Msa1460880:intergenic | 30.0% |
| !! | GAATTGTTTGTTGTTAGGTT+TGG | - | tig0041113:471-490 | Msa1460880:intron | 30.0% |
| TTGATTCTGATATGTTTGGT+TGG | - | tig0041113:990-1009 | Msa1460880:intron | 30.0% | |
| AGAGAGGCTAAAATTGATTA+CGG | - | tig0041113:1094-1113 | Msa1460880:intron | 30.0% | |
| ! | TTAATTCCGACATGTTTTGT+TGG | - | tig0041113:1127-1146 | Msa1460880:intron | 30.0% |
| TCAAAACCAACAAAACATGT+CGG | + | tig0041113:1136-1155 | Msa1460880:intergenic | 30.0% | |
| !!! | GTAGCTTTTGATTCTAGAAT+TGG | - | tig0041113:1205-1224 | Msa1460880:intron | 30.0% |
| ! | TGAAATTTGAATGGATTTGG+TGG | - | tig0041113:1716-1735 | Msa1460880:intron | 30.0% |
| ATGTAACTGTTAATTGCAGA+TGG | - | tig0041113:1892-1911 | Msa1460880:CDS | 30.0% | |
| !! | TGCGATTGGTTTATTAGTTA+AGG | - | tig0041113:2076-2095 | Msa1460880:intron | 30.0% |
| GTTTATTAGTTAAGGTTCCA+TGG | - | tig0041113:2084-2103 | Msa1460880:intron | 30.0% | |
| ! | GTAATGTTAGTGTTGCTAAT+TGG | - | tig0041113:2300-2319 | Msa1460880:CDS | 30.0% |
| GGTGTTTAGAAATCATTATG+TGG | - | tig0041113:2334-2353 | Msa1460880:CDS | 30.0% | |
| TCATTATGTGGCTTCTTAAT+AGG | - | tig0041113:2346-2365 | Msa1460880:CDS | 30.0% | |
| TCAATATTCATGAGGATAGT+TGG | - | tig0041113:2420-2439 | Msa1460880:CDS | 30.0% | |
| CAATATTCATGAGGATAGTT+GGG | - | tig0041113:2421-2440 | Msa1460880:CDS | 30.0% | |
| TCTAATCAATACGTCTTACT+AGG | + | tig0041113:2580-2599 | Msa1460880:intergenic | 30.0% | |
| !! | AGTAAGACGTATTGATTAGA+TGG | - | tig0041113:2580-2599 | Msa1460880:CDS | 30.0% |
| !! | TCTAAATGGTTTTACCATAG+AGG | - | tig0041113:2678-2697 | Msa1460880:intron | 30.0% |
| TCTTTACAAGAATCCAAACA+AGG | + | tig0041113:2808-2827 | Msa1460880:intergenic | 30.0% | |
| ATCATCAATACCTTTGTAAC+TGG | + | tig0041113:3007-3026 | Msa1460880:intergenic | 30.0% | |
| AGAATGATACTCTACTTATG+AGG | - | tig0041113:3052-3071 | Msa1460880:CDS | 30.0% | |
| ACTAAAATGTCCTTGCAATT+GGG | - | tig0041113:3241-3260 | Msa1460880:intron | 30.0% | |
| CTCAACTACTCTACATTAAT+TGG | + | tig0041113:3281-3300 | Msa1460880:intergenic | 30.0% | |
| TAAGTACTTAGTTGTGTCTT+TGG | - | tig0041113:3620-3639 | Msa1460880:intron | 30.0% | |
| CTAAAAACTTCCTTCTTTCA+AGG | + | tig0041113:3667-3686 | Msa1460880:intergenic | 30.0% | |
| CATAAAGAATTGTCTAGATG+GGG | + | tig0041113:3842-3861 | Msa1460880:intergenic | 30.0% | |
| GCATAAAGAATTGTCTAGAT+GGG | + | tig0041113:3843-3862 | Msa1460880:intergenic | 30.0% | |
| TGCATAAAGAATTGTCTAGA+TGG | + | tig0041113:3844-3863 | Msa1460880:intergenic | 30.0% | |
| TTGTAAATAAGCCTGAATTC+AGG | + | tig0041113:3896-3915 | Msa1460880:intergenic | 30.0% | |
| ! | GAATTCCCATTTAGTTTCTA+AGG | - | tig0041113:4002-4021 | Msa1460880:intron | 30.0% |
| ! | AGTAGCCTTAGAAACTAAAT+GGG | + | tig0041113:4010-4029 | Msa1460880:intergenic | 30.0% |
| ATTTACTCGACAAATGCAAA+GGG | + | tig0041113:4092-4111 | Msa1460880:intergenic | 30.0% | |
| CCAGATAATACATCTGAATA+AGG | + | tig0041113:4353-4372 | Msa1460880:intergenic | 30.0% | |
| CCTTATTCAGATGTATTATC+TGG | - | tig0041113:4350-4369 | Msa1460880:intron | 30.0% | |
| ! | TACAAATTCTCCTTTAAAGG+TGG | - | tig0041113:4573-4592 | Msa1460880:intron | 30.0% |
| CAATGCCTATTAGTAGTAAA+CGG | - | tig0041113:4712-4731 | Msa1460880:intron | 30.0% | |
| GTAATCCGTTTACTACTAAT+AGG | + | tig0041113:4720-4739 | Msa1460880:intergenic | 30.0% | |
| !! | AGAGAGTTACATTGATTTAG+TGG | - | tig0041113:5138-5157 | Msa1460880:intron | 30.0% |
| GATACTTATCAAATACCAGT+TGG | - | tig0041113:5554-5573 | Msa1460880:intron | 30.0% | |
| AAATCAATGTAACTAGCACA+AGG | + | tig0041113:5614-5633 | Msa1460880:intergenic | 30.0% | |
| !!! | TACTCGCAAGATTCTTTTTT+AGG | - | tig0041113:5765-5784 | Msa1460880:intron | 30.0% |
| ACAATGTCAAATTCCTAAAG+AGG | + | tig0041113:5875-5894 | Msa1460880:intergenic | 30.0% | |
| ACAATGTCAAATTCCTAAAG+AGG | + | tig0041113:5875-5894 | Msa1460880:intergenic | 30.0% | |
| ! | TTGTTGCATTTTTCATTTGC+AGG | - | tig0041113:5985-6004 | Msa1460880:CDS | 30.0% |
| ATATGGACTTCTGAATTGTT+GGG | + | tig0041113:6039-6058 | Msa1460880:intergenic | 30.0% | |
| ! | TTTTTCTGTACACTCTGATA+TGG | + | tig0041113:6056-6075 | Msa1460880:intergenic | 30.0% |
| !!! | TAACTGAGGAAGTTTTAAAG+TGG | + | tig0041113:6366-6385 | Msa1460880:intergenic | 30.0% |
| TAACAGAAAGATTCTCTGTT+TGG | + | tig0041113:6460-6479 | Msa1460880:intergenic | 30.0% | |
| ! | CTTGCTACTTCATTATTTGA+AGG | + | tig0041113:6500-6519 | Msa1460880:intergenic | 30.0% |
| ! | TTTTAGGCAAAAGATTTCGT+TGG | - | tig0041113:6549-6568 | Msa1460880:five_prime_UTR | 30.0% |
| TTTAGGCAAAAGATTTCGTT+GGG | - | tig0041113:6550-6569 | Msa1460880:five_prime_UTR | 30.0% | |
| ! | GTTTTGCGTTTAAGTGCTTT+TGG | - | tig0041113:244-263 | Msa1460880:CDS | 35.0% |
| TTCAAAACCGTATGAGAAGA+AGG | - | tig0041113:390-409 | Msa1460880:CDS | 35.0% | |
| GCAACTGTTCTCCTAATTTA+GGG | + | tig0041113:564-583 | Msa1460880:intergenic | 35.0% | |
| AGCAACTGTTCTCCTAATTT+AGG | + | tig0041113:565-584 | Msa1460880:intergenic | 35.0% | |
| GATCTTGTAGGATTTCGATA+AGG | - | tig0041113:723-742 | Msa1460880:CDS | 35.0% | |
| TGTAGGATTTCGATAAGGTT+TGG | - | tig0041113:728-747 | Msa1460880:CDS | 35.0% | |
| ! | TCAATCACGTGATTTTCGTA+AGG | - | tig0041113:768-787 | Msa1460880:intron | 35.0% |
| !! | TCTGGCAAAAATTGAGTTGA+AGG | - | tig0041113:856-875 | Msa1460880:intron | 35.0% |
| ! | TGTTTGAAATGTGGATGCAT+TGG | - | tig0041113:891-910 | Msa1460880:intron | 35.0% |
| ! | TGATTAGTTCCATTCTAGAG+AGG | - | tig0041113:941-960 | Msa1460880:intron | 35.0% |
| AGAGAGGTCGAAATTGAATT+TGG | - | tig0041113:957-976 | Msa1460880:intron | 35.0% | |
| !!! | GTTTGGTTGGTTTTGTAAAG+TGG | - | tig0041113:1003-1022 | Msa1460880:intron | 35.0% |
| !! | TGTTTTGAATTGGGATGCAT+TGG | - | tig0041113:1030-1049 | Msa1460880:intron | 35.0% |
| !! | GTAATCAATTTTAGCCTCTC+TGG | + | tig0041113:1095-1114 | Msa1460880:intergenic | 35.0% |
| !! | CAAAATCAGTTCTAAACCTC+TGG | - | tig0041113:1449-1468 | Msa1460880:intron | 35.0% |
| !! | TAAACCTCTGGAATCAATGT+TGG | - | tig0041113:1461-1480 | Msa1460880:intron | 35.0% |
| !! | TGTATGTTTGGTTCCACTTT+TGG | + | tig0041113:1492-1511 | Msa1460880:intergenic | 35.0% |
| !! | TTTGAATGGATTTGGTGGAA+TGG | - | tig0041113:1721-1740 | Msa1460880:intron | 35.0% |
| ATGAGATTGAATACCAACCT+AGG | + | tig0041113:1869-1888 | Msa1460880:intergenic | 35.0% | |
| !! | TTAGCTCTAGCATAAGTTTG+TGG | - | tig0041113:2122-2141 | Msa1460880:intron | 35.0% |
| TCTAGCATAAGTTTGTGGTT+TGG | - | tig0041113:2127-2146 | Msa1460880:intron | 35.0% | |
| CTAGCATAAGTTTGTGGTTT+GGG | - | tig0041113:2128-2147 | Msa1460880:intron | 35.0% | |
| GTCTTCTGCTTCTTGTTAAT+TGG | - | tig0041113:2185-2204 | Msa1460880:intron | 35.0% | |
| TTCTGCTTCTTGTTAATTGG+TGG | - | tig0041113:2188-2207 | Msa1460880:intron | 35.0% | |
| !! | TAATTGGTGGCTTTTTAGAG+TGG | - | tig0041113:2201-2220 | Msa1460880:CDS | 35.0% |
| TTTCAGCTGATGTAGCATTA+CGG | - | tig0041113:2249-2268 | Msa1460880:CDS | 35.0% | |
| !! | TGCTAATTGGTCTTCAATAG+AGG | - | tig0041113:2313-2332 | Msa1460880:CDS | 35.0% |
| TCTTTGGTAAAACTCCTCTA+TGG | + | tig0041113:2695-2714 | Msa1460880:intergenic | 35.0% | |
| ! | ATAGAGGAGTTTTACCAAAG+AGG | - | tig0041113:2694-2713 | Msa1460880:intron | 35.0% |
| ! | TAGAAATCTTTTCCCAAGGT+GGG | + | tig0041113:2728-2747 | Msa1460880:intergenic | 35.0% |
| ! | ATAGAAATCTTTTCCCAAGG+TGG | + | tig0041113:2729-2748 | Msa1460880:intergenic | 35.0% |
| AATCGGATAACGTAATCATG+TGG | - | tig0041113:2766-2785 | Msa1460880:CDS | 35.0% | |
| TACTCTACTTCCAGTTACAA+AGG | - | tig0041113:2994-3013 | Msa1460880:CDS | 35.0% | |
| GACTAAAATGTCCTTGCAAT+TGG | - | tig0041113:3240-3259 | Msa1460880:intron | 35.0% | |
| CTAAAATGTCCTTGCAATTG+GGG | - | tig0041113:3242-3261 | Msa1460880:intron | 35.0% | |
| AGACACTTAATATGAGACAG+AGG | - | tig0041113:3412-3431 | Msa1460880:intron | 35.0% | |
| GTAATTGTTTCCAAGACCTT+TGG | - | tig0041113:3436-3455 | Msa1460880:intron | 35.0% | |
| ! | ATACTTTTGTACCATGCCAA+AGG | + | tig0041113:3455-3474 | Msa1460880:intergenic | 35.0% |
| ATTGTAGACGAAATGTTCAG+AGG | + | tig0041113:3491-3510 | Msa1460880:intergenic | 35.0% | |
| ! | TTGTGTCTTTGGTCTTTAAC+AGG | - | tig0041113:3631-3650 | Msa1460880:intron | 35.0% |
| AAATGACTGCTGAATTTCGT+GGG | - | tig0041113:3741-3760 | Msa1460880:intron | 35.0% | |
| GGCTTATTTACAACAAGAGT+TGG | - | tig0041113:3903-3922 | Msa1460880:intron | 35.0% | |
| TTAAATTGGAAGGAGAACTC+TGG | - | tig0041113:3953-3972 | Msa1460880:intron | 35.0% | |
| TAAATTGGAAGGAGAACTCT+GGG | - | tig0041113:3954-3973 | Msa1460880:intron | 35.0% | |
| ! | GAGTAGCCTTAGAAACTAAA+TGG | + | tig0041113:4011-4030 | Msa1460880:intergenic | 35.0% |
| TTTACTCGACAAATGCAAAG+GGG | + | tig0041113:4091-4110 | Msa1460880:intergenic | 35.0% | |
| CATTTACTCGACAAATGCAA+AGG | + | tig0041113:4093-4112 | Msa1460880:intergenic | 35.0% | |
| TGAGCTATCAAGTCTTCAAT+AGG | + | tig0041113:4183-4202 | Msa1460880:intergenic | 35.0% | |
| ! | TTGAAGACTTGATAGCTCAT+CGG | - | tig0041113:4184-4203 | Msa1460880:intron | 35.0% |
| AACAGTTGATCTCCAGATAT+TGG | + | tig0041113:4245-4264 | Msa1460880:intergenic | 35.0% | |
| !!! | AATTTTAGGTACCGAATCTC+TGG | - | tig0041113:4287-4306 | Msa1460880:intron | 35.0% |
| ATGTATTATCTGGTGACTCT+GGG | - | tig0041113:4360-4379 | Msa1460880:intron | 35.0% | |
| TCGACATAGCAGAAGTTATA+CGG | - | tig0041113:4492-4511 | Msa1460880:intron | 35.0% | |
| CCAGATGAAGTGATTGTTTA+TGG | + | tig0041113:4544-4563 | Msa1460880:intergenic | 35.0% | |
| CCATAAACAATCACTTCATC+TGG | - | tig0041113:4541-4560 | Msa1460880:intron | 35.0% | |
| ACATATGTGACCACCTTTAA+AGG | + | tig0041113:4586-4605 | Msa1460880:intergenic | 35.0% | |
| CATACACAACAATGCAAGAA+AGG | + | tig0041113:4619-4638 | Msa1460880:intergenic | 35.0% | |
| CTTTCTTGCATTGTTGTGTA+TGG | - | tig0041113:4617-4636 | Msa1460880:intron | 35.0% | |
| GCATTGTTGTGTATGGTTTA+TGG | - | tig0041113:4624-4643 | Msa1460880:intron | 35.0% | |
| CTATGTGAATCGCTGTATTT+AGG | + | tig0041113:4686-4705 | Msa1460880:intergenic | 35.0% | |
| ACACCAAGACAAGACATATA+AGG | + | tig0041113:5265-5284 | Msa1460880:intergenic | 35.0% | |
| TTAATTAAGGAGGAAGAGCA+AGG | + | tig0041113:5498-5517 | Msa1460880:intergenic | 35.0% | |
| TATGGACTTCTGAATTGTTG+GGG | + | tig0041113:6038-6057 | Msa1460880:intergenic | 35.0% | |
| GATATGGACTTCTGAATTGT+TGG | + | tig0041113:6040-6059 | Msa1460880:intergenic | 35.0% | |
| TACAGAAAAAGTGAACTGCT+TGG | - | tig0041113:6066-6085 | Msa1460880:intron | 35.0% | |
| CAATAGATGTGGAGTTAGAT+TGG | + | tig0041113:6095-6114 | Msa1460880:intergenic | 35.0% | |
| TGATGTCTGTTCAATAGATG+TGG | + | tig0041113:6106-6125 | Msa1460880:intergenic | 35.0% | |
| !!! | TGAGGAAGTTTTAAAGTGGA+GGG | + | tig0041113:6362-6381 | Msa1460880:intergenic | 35.0% |
| AATGAAGTAGCAAGTTCAGA+AGG | - | tig0041113:6506-6525 | Msa1460880:five_prime_UTR | 35.0% | |
| TTAGGCAAAAGATTTCGTTG+GGG | - | tig0041113:6551-6570 | Msa1460880:five_prime_UTR | 35.0% | |
| GGGATAAAAAACCATCCTTT+GGG | - | tig0041113:6572-6591 | Msa1460880:five_prime_UTR | 35.0% | |
| !! | ATTTGCTGATTCTTACACGG+CGG | + | tig0041113:302-321 | Msa1460880:intergenic | 40.0% |
| GTCATCACCTTCTTCTCATA+CGG | + | tig0041113:400-419 | Msa1460880:intergenic | 40.0% | |
| GTTGTTAGGTTTGGATCCAT+CGG | - | tig0041113:480-499 | Msa1460880:intron | 40.0% | |
| CGTCATTCCAACCCTAAATT+AGG | - | tig0041113:550-569 | Msa1460880:intron | 40.0% | |
| ! | CTGTTCTCCTAATTTAGGGT+TGG | + | tig0041113:560-579 | Msa1460880:intergenic | 40.0% |
| TTCATTCTCTCTTCTCTCAG+AGG | - | tig0041113:589-608 | Msa1460880:CDS | 40.0% | |
| GATTGAGCGGAATCGAAAAT+CGG | + | tig0041113:754-773 | Msa1460880:intergenic | 40.0% | |
| ACGAAAATCACGTGATTGAG+CGG | + | tig0041113:767-786 | Msa1460880:intergenic | 40.0% | |
| ! | CACGTGATTTTCGTAAGGTA+AGG | - | tig0041113:773-792 | Msa1460880:intron | 40.0% |
| ! | CAATTTCGACCTCTCTAGAA+TGG | + | tig0041113:953-972 | Msa1460880:intergenic | 40.0% |
| GAGGTCGAAATTGAATTTGG+AGG | - | tig0041113:960-979 | Msa1460880:intron | 40.0% | |
| !! | AATTTTAGCCTCTCTGGAAG+TGG | + | tig0041113:1089-1108 | Msa1460880:intergenic | 40.0% |
| GAGGCTAAAATTGATTACGG+AGG | - | tig0041113:1097-1116 | Msa1460880:intron | 40.0% | |
| !! | AATGTTGGTTCCTCCAAAAG+TGG | - | tig0041113:1476-1495 | Msa1460880:intron | 40.0% |
| !! | ATGTTTGGTTCCACTTTTGG+AGG | + | tig0041113:1489-1508 | Msa1460880:intergenic | 40.0% |
| !! | GTTTAATTTGTATGCACCGC+TGG | - | tig0041113:1518-1537 | Msa1460880:intron | 40.0% |
| ! | TCTAAAGCCACAAGCACAAT+TGG | + | tig0041113:1576-1595 | Msa1460880:intergenic | 40.0% |
| ACTTCCTAGAAGCAATTCGA+GGG | - | tig0041113:1817-1836 | Msa1460880:intron | 40.0% | |
| ! | TTGTGGTTTGGGAATCTTGT+TGG | - | tig0041113:2139-2158 | Msa1460880:intron | 40.0% |
| AATCTTGTTGGATTCGTTGC+TGG | - | tig0041113:2151-2170 | Msa1460880:intron | 40.0% | |
| TTACTAGGCTTGGGTTCTAT+TGG | + | tig0041113:2565-2584 | Msa1460880:intergenic | 40.0% | |
| CAATACGTCTTACTAGGCTT+GGG | + | tig0041113:2574-2593 | Msa1460880:intergenic | 40.0% | |
| TCAATACGTCTTACTAGGCT+TGG | + | tig0041113:2575-2594 | Msa1460880:intergenic | 40.0% | |
| GTTTACAGAAGCTCCTTGTT+TGG | - | tig0041113:2792-2811 | Msa1460880:CDS | 40.0% | |
| !!! | GTAGGTTTGTTGAGCTTTTG+TGG | - | tig0041113:2861-2880 | Msa1460880:intron | 40.0% |
| TCATCGACGGACATTTACTT+CGG | - | tig0041113:2913-2932 | Msa1460880:intron | 40.0% | |
| GAGAATGCTACATCAGTCAA+TGG | + | tig0041113:2965-2984 | Msa1460880:intergenic | 40.0% | |
| TGTTCAGAGGAAAAGAGGTA+TGG | + | tig0041113:3478-3497 | Msa1460880:intergenic | 40.0% | |
| CGAAATGTTCAGAGGAAAAG+AGG | + | tig0041113:3483-3502 | Msa1460880:intergenic | 40.0% | |
| CAAGAATAGCCCTTGAAAGA+AGG | - | tig0041113:3654-3673 | Msa1460880:intron | 40.0% | |
| ATGCAGAAATGGCTGTACAA+CGG | - | tig0041113:3690-3709 | Msa1460880:intron | 40.0% | |
| GAAATGACTGCTGAATTTCG+TGG | - | tig0041113:3740-3759 | Msa1460880:intron | 40.0% | |
| !! | TTTCTAAGGCTACTCGTCTA+TGG | - | tig0041113:4016-4035 | Msa1460880:intron | 40.0% |
| !! | TTCTAAGGCTACTCGTCTAT+GGG | - | tig0041113:4017-4036 | Msa1460880:intron | 40.0% |
| AACACGAAGTTCTTGCATCA+GGG | - | tig0041113:4157-4176 | Msa1460880:intron | 40.0% | |
| ! | TGAAGACTTGATAGCTCATC+GGG | - | tig0041113:4185-4204 | Msa1460880:intron | 40.0% |
| TTGATCTCCAGATATTGGAG+AGG | + | tig0041113:4240-4259 | Msa1460880:intergenic | 40.0% | |
| TATCTGGAGATCAACTGTTC+TGG | - | tig0041113:4246-4265 | Msa1460880:intron | 40.0% | |
| TACATCTGAATAAGGAGCCT+GGG | + | tig0041113:4345-4364 | Msa1460880:intergenic | 40.0% | |
| ATACATCTGAATAAGGAGCC+TGG | + | tig0041113:4346-4365 | Msa1460880:intergenic | 40.0% | |
| GATGTATTATCTGGTGACTC+TGG | - | tig0041113:4359-4378 | Msa1460880:intron | 40.0% | |
| TGTATTATCTGGTGACTCTG+GGG | - | tig0041113:4361-4380 | Msa1460880:intron | 40.0% | |
| TTGTTGTCTGTTTGCACTGA+AGG | + | tig0041113:4392-4411 | Msa1460880:intergenic | 40.0% | |
| TCAGTGCAAACAGACAACAA+AGG | - | tig0041113:4392-4411 | Msa1460880:intron | 40.0% | |
| CAGTGCAAACAGACAACAAA+GGG | - | tig0041113:4393-4412 | Msa1460880:intron | 40.0% | |
| AGTGCAAACAGACAACAAAG+GGG | - | tig0041113:4394-4413 | Msa1460880:intron | 40.0% | |
| ACAACAGTGGATGACAGAAA+TGG | - | tig0041113:4452-4471 | Msa1460880:intron | 40.0% | |
| CAACAGTGGATGACAGAAAT+GGG | - | tig0041113:4453-4472 | Msa1460880:intron | 40.0% | |
| ACACAACAATGCAAGAAAGG+AGG | + | tig0041113:4616-4635 | Msa1460880:intergenic | 40.0% | |
| ! | TCAAGCTTTTATCCATCTGC+AGG | - | tig0041113:4766-4785 | Msa1460880:intron | 40.0% |
| ! | GCAAAAGCAAATGATGGAGA+GGG | - | tig0041113:4788-4807 | Msa1460880:intron | 40.0% |
| TGTGCACTACGCAATATATC+TGG | + | tig0041113:4815-4834 | Msa1460880:intergenic | 40.0% | |
| AGATATATTGCGTAGTGCAC+AGG | - | tig0041113:4814-4833 | Msa1460880:intron | 40.0% | |
| !!! | GCTTGTTTTAATGCATCACC+TGG | + | tig0041113:4913-4932 | Msa1460880:intergenic | 40.0% |
| GGATCAATGAAGTATGGTAG+AGG | + | tig0041113:5031-5050 | Msa1460880:intergenic | 40.0% | |
| GATGCAGGATCAATGAAGTA+TGG | + | tig0041113:5037-5056 | Msa1460880:intergenic | 40.0% | |
| !! | TGGCCTTATATGTCTTGTCT+TGG | - | tig0041113:5259-5278 | Msa1460880:intron | 40.0% |
| !! | ATGTCTTGTCTTGGTGTTTG+TGG | - | tig0041113:5268-5287 | Msa1460880:intron | 40.0% |
| TCTCATAGAACAAAGCCAAC+TGG | + | tig0041113:5572-5591 | Msa1460880:intergenic | 40.0% | |
| TACTCGCAAGATTCCTCTTT+AGG | - | tig0041113:5859-5878 | Msa1460880:intron | 40.0% | |
| TACTCGCAAGATTCCTCTTT+AGG | - | tig0041113:5859-5878 | Msa1460880:intron | 40.0% | |
| TAGATGTGGAGTTAGATTGG+AGG | + | tig0041113:6092-6111 | Msa1460880:intergenic | 40.0% | |
| !! | GAAAGTGGTACTGATGATGT+TGG | - | tig0041113:6284-6303 | Msa1460880:CDS | 40.0% |
| ! | TACTGATGATGTTGGTGAGT+TGG | - | tig0041113:6292-6311 | Msa1460880:CDS | 40.0% |
| GTCTAATGTTCAGCTTGACA+AGG | - | tig0041113:6325-6344 | Msa1460880:CDS | 40.0% | |
| !!! | CTGAGGAAGTTTTAAAGTGG+AGG | + | tig0041113:6363-6382 | Msa1460880:intergenic | 40.0% |
| ! | TTCCAGCTTTTCCAGAAGAT+GGG | + | tig0041113:6400-6419 | Msa1460880:intergenic | 40.0% |
| ! | TTTCCAGCTTTTCCAGAAGA+TGG | + | tig0041113:6401-6420 | Msa1460880:intergenic | 40.0% |
| GAAAAGCTGGAAATGTGCAA+AGG | - | tig0041113:6408-6427 | Msa1460880:five_prime_UTR | 40.0% | |
| AGAAAGATTCTCTGTTTGGC+TGG | + | tig0041113:6456-6475 | Msa1460880:intergenic | 40.0% | |
| TAGGCAAAAGATTTCGTTGG+GGG | - | tig0041113:6552-6571 | Msa1460880:five_prime_UTR | 40.0% | |
| GGGGATAAAAAACCATCCTT+TGG | - | tig0041113:6571-6590 | Msa1460880:five_prime_UTR | 40.0% | |
| ! | TGAGAAGAAGGTGATGACGA+TGG | - | tig0041113:402-421 | Msa1460880:CDS | 45.0% |
| ! | GGTTTGGATCCATCGGTTAT+TGG | - | tig0041113:487-506 | Msa1460880:intron | 45.0% |
| ! | GATCCATCGGTTATTGGAGT+TGG | - | tig0041113:493-512 | Msa1460880:intron | 45.0% |
| TCGAATTCAACTCCTCGTGT+TGG | - | tig0041113:520-539 | Msa1460880:intron | 45.0% | |
| ! | GATTAGTTCCACTTCCAGAG+AGG | - | tig0041113:1078-1097 | Msa1460880:intron | 45.0% |
| !! | GGAACCAACATTGATTCCAG+AGG | + | tig0041113:1468-1487 | Msa1460880:intergenic | 45.0% |
| CTGTAAAACTGCTACACCAG+CGG | + | tig0041113:1537-1556 | Msa1460880:intergenic | 45.0% | |
| AACCGAACCAATTGTGCTTG+TGG | - | tig0041113:1566-1585 | Msa1460880:intron | 45.0% | |
| AGCCACAAGCACAATTGGTT+CGG | + | tig0041113:1571-1590 | Msa1460880:intergenic | 45.0% | |
| !!! | TGGAATGGTTTTGAACCGTG+TGG | - | tig0041113:1736-1755 | Msa1460880:intron | 45.0% |
| !!! | AATGGTTTTGAACCGTGTGG+TGG | - | tig0041113:1739-1758 | Msa1460880:intron | 45.0% |
| ACCAAACACATTCCACCACA+CGG | + | tig0041113:1754-1773 | Msa1460880:intergenic | 45.0% | |
| ! | TGTGGTGGAATGTGTTTGGT+AGG | - | tig0041113:1754-1773 | Msa1460880:intron | 45.0% |
| ATTAGTGAGCTTGAGTCGCA+AGG | - | tig0041113:1791-1810 | Msa1460880:intron | 45.0% | |
| CACTTCCTAGAAGCAATTCG+AGG | - | tig0041113:1816-1835 | Msa1460880:intron | 45.0% | |
| GAAACCCTCGAATTGCTTCT+AGG | + | tig0041113:1824-1843 | Msa1460880:intergenic | 45.0% | |
| ! | TCTTCGCTTGCTACTTGTTG+TGG | - | tig0041113:1842-1861 | Msa1460880:intron | 45.0% |
| !! | TTGCTACTTGTTGTGGACCT+AGG | - | tig0041113:1849-1868 | Msa1460880:CDS | 45.0% |
| !! | TACTTGTTGTGGACCTAGGT+TGG | - | tig0041113:1853-1872 | Msa1460880:CDS | 45.0% |
| TGTTGTACGCTTACTGCGAT+TGG | - | tig0041113:2062-2081 | Msa1460880:intron | 45.0% | |
| AAGAGAGCGATAGCATTCCA+TGG | + | tig0041113:2104-2123 | Msa1460880:intergenic | 45.0% | |
| !! | TGGTGATGCATTTTGCAGCA+GGG | - | tig0041113:2221-2240 | Msa1460880:CDS | 45.0% |
| TAGCATTACGGTGGCAGATT+TGG | - | tig0041113:2261-2280 | Msa1460880:CDS | 45.0% | |
| ! | ATTACGGTGGCAGATTTGGT+GGG | - | tig0041113:2265-2284 | Msa1460880:CDS | 45.0% |
| ! | TCGAAAGAGCATAAGCTGAG+TGG | - | tig0041113:2392-2411 | Msa1460880:CDS | 45.0% |
| AGGATAGTTGGGTAGATGAG+TGG | - | tig0041113:2432-2451 | Msa1460880:CDS | 45.0% | |
| TCAGTCAATGGTGTAGGCAA+TGG | + | tig0041113:2953-2972 | Msa1460880:intergenic | 45.0% | |
| GCTACATCAGTCAATGGTGT+AGG | + | tig0041113:2959-2978 | Msa1460880:intergenic | 45.0% | |
| TCCTTGCAATTGGGGTTATG+TGG | - | tig0041113:3250-3269 | Msa1460880:intron | 45.0% | |
| TCCACATAACCCCAATTGCA+AGG | + | tig0041113:3254-3273 | Msa1460880:intergenic | 45.0% | |
| TGTTTCCAAGACCTTTGGCA+TGG | - | tig0041113:3441-3460 | Msa1460880:intron | 45.0% | |
| TTGTACCATGCCAAAGGTCT+TGG | + | tig0041113:3449-3468 | Msa1460880:intergenic | 45.0% | |
| GCAGGCTATGTGGTCTAATT+TGG | - | tig0041113:3712-3731 | Msa1460880:intron | 45.0% | |
| GAATTGTCTAGATGGGGAGA+AGG | + | tig0041113:3836-3855 | Msa1460880:intergenic | 45.0% | |
| CAACACGAAGTTCTTGCATC+AGG | - | tig0041113:4156-4175 | Msa1460880:intron | 45.0% | |
| TGATAGCTCATCGGGAACAT+AGG | - | tig0041113:4193-4212 | Msa1460880:intron | 45.0% | |
| TACCTTGCCTCTCCAATATC+TGG | - | tig0041113:4230-4249 | Msa1460880:intron | 45.0% | |
| GCAGAGATGATCCAGAGATT+CGG | + | tig0041113:4301-4320 | Msa1460880:intergenic | 45.0% | |
| ATCATCTCTGCTTGCAGCAA+TGG | - | tig0041113:4310-4329 | Msa1460880:intron | 45.0% | |
| GACAACAAAGGGGAGATTGA+TGG | - | tig0041113:4404-4423 | Msa1460880:intron | 45.0% | |
| CAGTGAGACATTGACAACAG+TGG | - | tig0041113:4439-4458 | Msa1460880:intron | 45.0% | |
| CTTCTGCTATGTCGACAGTT+TGG | + | tig0041113:4487-4506 | Msa1460880:intergenic | 45.0% | |
| TAGCAGAAGTTATACGGCGT+TGG | - | tig0041113:4498-4517 | Msa1460880:intron | 45.0% | |
| TATGGCCACCAAATGCGAAT+AGG | - | tig0041113:4642-4661 | Msa1460880:intron | 45.0% | |
| ATGGCCACCAAATGCGAATA+GGG | - | tig0041113:4643-4662 | Msa1460880:intron | 45.0% | |
| ATAAGCCCCCTATTCGCATT+TGG | + | tig0041113:4653-4672 | Msa1460880:intergenic | 45.0% | |
| !! | CATTTGCTTTTGCCTGCAGA+TGG | + | tig0041113:4781-4800 | Msa1460880:intergenic | 45.0% |
| CTGCAGGCAAAAGCAAATGA+TGG | - | tig0041113:4782-4801 | Msa1460880:intron | 45.0% | |
| ! | GGCAAAAGCAAATGATGGAG+AGG | - | tig0041113:4787-4806 | Msa1460880:intron | 45.0% |
| ATATTGCGTAGTGCACAGGA+AGG | - | tig0041113:4818-4837 | Msa1460880:intron | 45.0% | |
| AAGGGTTGCTGCTAAAGACT+CGG | + | tig0041113:4861-4880 | Msa1460880:intergenic | 45.0% | |
| TCTCTTCAGCGAAAAGATGC+AGG | + | tig0041113:5052-5071 | Msa1460880:intergenic | 45.0% | |
| ! | TTTTAAGCATGCCTTGCCTG+AGG | - | tig0041113:5224-5243 | Msa1460880:intron | 45.0% |
| TTTAAGCATGCCTTGCCTGA+GGG | - | tig0041113:5225-5244 | Msa1460880:intron | 45.0% | |
| AAATTCTAACCCCTCAGGCA+AGG | + | tig0041113:5238-5257 | Msa1460880:intergenic | 45.0% | |
| ! | GCCTGAGGGGTTAGAATTTT+TGG | - | tig0041113:5239-5258 | Msa1460880:intron | 45.0% |
| GCCAAAAATTCTAACCCCTC+AGG | + | tig0041113:5243-5262 | Msa1460880:intergenic | 45.0% | |
| CTTGGATAGGTGATGTTGAC+TGG | + | tig0041113:6132-6151 | Msa1460880:intergenic | 45.0% | |
| GGGGTCATGCTAAATAACTG+AGG | + | tig0041113:6380-6399 | Msa1460880:intergenic | 45.0% | |
| TTTAGCATGACCCCATCTTC+TGG | - | tig0041113:6386-6405 | Msa1460880:five_prime_UTR | 45.0% | |
| ! | TCCAGCTTTTCCAGAAGATG+GGG | + | tig0041113:6399-6418 | Msa1460880:intergenic | 45.0% |
| AAGCTGGAAATGTGCAAAGG+CGG | - | tig0041113:6411-6430 | Msa1460880:five_prime_UTR | 45.0% | |
| TTCAGTAGAGACCCAAAGGA+TGG | + | tig0041113:6586-6605 | Msa1460880:intergenic | 45.0% | |
| GCAATTCAGTAGAGACCCAA+AGG | + | tig0041113:6590-6609 | Msa1460880:intergenic | 45.0% | |
| !!! | AAAATTGATAATAAAAAATA+GGG | + | tig0041113:6252-6271 | Msa1460880:intergenic | 5.0% |
| !!! | TAAAATTGATAATAAAAAAT+AGG | + | tig0041113:6253-6272 | Msa1460880:intergenic | 5.0% |
| GCTCCAACTCCAATAACCGA+TGG | + | tig0041113:499-518 | Msa1460880:intergenic | 50.0% | |
| TGACGAAATGCACCAACACG+AGG | + | tig0041113:535-554 | Msa1460880:intergenic | 50.0% | |
| ! | ACCGTGTGGTGGAATGTGTT+TGG | - | tig0041113:1750-1769 | Msa1460880:intron | 50.0% |
| !! | GTGGTGATGCATTTTGCAGC+AGG | - | tig0041113:2220-2239 | Msa1460880:CDS | 50.0% |
| CAGCTGATGTAGCATTACGG+TGG | - | tig0041113:2252-2271 | Msa1460880:CDS | 50.0% | |
| CATTACGGTGGCAGATTTGG+TGG | - | tig0041113:2264-2283 | Msa1460880:CDS | 50.0% | |
| !! | TTACGGTGGCAGATTTGGTG+GGG | - | tig0041113:2266-2285 | Msa1460880:CDS | 50.0% |
| TTCGTTGCATGCTTTGCGAG+AGG | - | tig0041113:2889-2908 | Msa1460880:intron | 50.0% | |
| CTTTGCGAGAGGTTCATCGA+CGG | - | tig0041113:2900-2919 | Msa1460880:intron | 50.0% | |
| AGAAATGGCTGTACAACGGC+AGG | - | tig0041113:3694-3713 | Msa1460880:intron | 50.0% | |
| CTCCAGATATTGGAGAGGCA+AGG | + | tig0041113:4235-4254 | Msa1460880:intergenic | 50.0% | |
| AATAAGGAGCCTGGGAACTC+TGG | + | tig0041113:4337-4356 | Msa1460880:intergenic | 50.0% | |
| TGGCCACCAAATGCGAATAG+GGG | - | tig0041113:4644-4663 | Msa1460880:intron | 50.0% | |
| TTGCTGCTAAAGACTCGGCA+TGG | + | tig0041113:4856-4875 | Msa1460880:intergenic | 50.0% | |
| ! | GTGTTGCTGATGCTCTGCAA+GGG | + | tig0041113:4879-4898 | Msa1460880:intergenic | 50.0% |
| ! | AGTGTTGCTGATGCTCTGCA+AGG | + | tig0041113:4880-4899 | Msa1460880:intergenic | 50.0% |
| ! | TGCAGAGCATCAGCAACACT+TGG | - | tig0041113:4880-4899 | Msa1460880:intron | 50.0% |
| TTAAGCATGCCTTGCCTGAG+GGG | - | tig0041113:5226-5245 | Msa1460880:intron | 50.0% | |
| CTTCGCTCTGTTCATGCTAG+TGG | - | tig0041113:5700-5719 | Msa1460880:intron | 50.0% | |
| TTGGGGCAACGTCTTTGAGT+TGG | + | tig0041113:6021-6040 | Msa1460880:intergenic | 50.0% | |
| CTATCCAAGCACAGAGCAGT+GGG | - | tig0041113:6143-6162 | Msa1460880:CDS | 50.0% | |
| ! | ACCCCATCTTCTGGAAAAGC+TGG | - | tig0041113:6395-6414 | Msa1460880:five_prime_UTR | 50.0% |
| !! | TGCTGATTCTTACACGGCGG+AGG | + | tig0041113:299-318 | Msa1460880:intergenic | 55.0% |
| !! | TACGGTGGCAGATTTGGTGG+GGG | - | tig0041113:2267-2286 | Msa1460880:CDS | 55.0% |
| GGTGGGTCTCAACTCCTCTT+TGG | + | tig0041113:2711-2730 | Msa1460880:intergenic | 55.0% | |
| AGAGGAGTTGAGACCCACCT+TGG | - | tig0041113:2712-2731 | Msa1460880:CDS | 55.0% | |
| GAGGAGTTGAGACCCACCTT+GGG | - | tig0041113:2713-2732 | Msa1460880:CDS | 55.0% | |
| CTGTACAACGGCAGGCTATG+TGG | - | tig0041113:3702-3721 | Msa1460880:intron | 55.0% | |
| ! | TCGTGGGTTATGCGCTGAAG+AGG | - | tig0041113:3757-3776 | Msa1460880:CDS | 55.0% |
| AGCAATGGACCAGAGTTCCC+AGG | - | tig0041113:4325-4344 | Msa1460880:intron | 55.0% | |
| GGCCACCAAATGCGAATAGG+GGG | - | tig0041113:4645-4664 | Msa1460880:intron | 55.0% | |
| AGCCCCCTATTCGCATTTGG+TGG | + | tig0041113:4650-4669 | Msa1460880:intergenic | 55.0% | |
| GCACAGGAAGGCAGTTCAAG+TGG | - | tig0041113:4830-4849 | Msa1460880:intron | 55.0% | |
| !! | GCAACACTTGGCTAGCTTCC+AGG | - | tig0041113:4892-4911 | Msa1460880:CDS | 55.0% |
| CCACTGCTCTGTGCTTGGAT+AGG | + | tig0041113:6145-6164 | Msa1460880:intergenic | 55.0% | |
| CCTATCCAAGCACAGAGCAG+TGG | - | tig0041113:6142-6161 | Msa1460880:CDS | 55.0% | |
| GGAAATGTGCAAAGGCGGCA+TGG | - | tig0041113:6416-6435 | Msa1460880:five_prime_UTR | 55.0% | |
| TCCAAGCACAGAGCAGTGGG+AGG | - | tig0041113:6146-6165 | Msa1460880:CDS | 60.0% | |
| TCCTCCCACTGCTCTGTGCT+TGG | + | tig0041113:6150-6169 | Msa1460880:intergenic | 60.0% | |
| AGCACAGAGCAGTGGGAGGA+TGG | - | tig0041113:6150-6169 | Msa1460880:CDS | 60.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| tig0041113 | gene | 140 | 6619 | 140 | ID=Msa1460880;Name=Msa1460880 |
| tig0041113 | mRNA | 140 | 6619 | 140 | ID=Msa1460880-mRNA-1;Parent=Msa1460880;Name=Msa1460880-mRNA-1;_AED=0.07;_eAED=0.07;_QI=275|1|1|1|1|1|11|15|580 |
| tig0041113 | exon | 140 | 475 | 140 | ID=Msa1460880-mRNA-1:exon:22931;Parent=Msa1460880-mRNA-1 |
| tig0041113 | exon | 588 | 752 | 588 | ID=Msa1460880-mRNA-1:exon:22930;Parent=Msa1460880-mRNA-1 |
| tig0041113 | exon | 1846 | 1971 | 1846 | ID=Msa1460880-mRNA-1:exon:22929;Parent=Msa1460880-mRNA-1 |
| tig0041113 | exon | 2197 | 2464 | 2197 | ID=Msa1460880-mRNA-1:exon:22928;Parent=Msa1460880-mRNA-1 |
| tig0041113 | exon | 2545 | 2605 | 2545 | ID=Msa1460880-mRNA-1:exon:22927;Parent=Msa1460880-mRNA-1 |
| tig0041113 | exon | 2699 | 2855 | 2699 | ID=Msa1460880-mRNA-1:exon:22926;Parent=Msa1460880-mRNA-1 |
| tig0041113 | exon | 2981 | 3106 | 2981 | ID=Msa1460880-mRNA-1:exon:22925;Parent=Msa1460880-mRNA-1 |
| tig0041113 | exon | 3744 | 3894 | 3744 | ID=Msa1460880-mRNA-1:exon:22924;Parent=Msa1460880-mRNA-1 |
| tig0041113 | exon | 4889 | 4983 | 4889 | ID=Msa1460880-mRNA-1:exon:22923;Parent=Msa1460880-mRNA-1 |
| tig0041113 | exon | 5970 | 6026 | 5970 | ID=Msa1460880-mRNA-1:exon:22922;Parent=Msa1460880-mRNA-1 |
| tig0041113 | exon | 6129 | 6619 | 6129 | ID=Msa1460880-mRNA-1:exon:22921;Parent=Msa1460880-mRNA-1 |
| tig0041113 | five_prime_UTR | 6345 | 6619 | 6345 | ID=Msa1460880-mRNA-1:five_prime_utr;Parent=Msa1460880-mRNA-1 |
| tig0041113 | CDS | 6129 | 6344 | 6129 | ID=Msa1460880-mRNA-1:cds;Parent=Msa1460880-mRNA-1 |
| tig0041113 | CDS | 5970 | 6026 | 5970 | ID=Msa1460880-mRNA-1:cds;Parent=Msa1460880-mRNA-1 |
| tig0041113 | CDS | 4889 | 4983 | 4889 | ID=Msa1460880-mRNA-1:cds;Parent=Msa1460880-mRNA-1 |
| tig0041113 | CDS | 3744 | 3894 | 3744 | ID=Msa1460880-mRNA-1:cds;Parent=Msa1460880-mRNA-1 |
| tig0041113 | CDS | 2981 | 3106 | 2981 | ID=Msa1460880-mRNA-1:cds;Parent=Msa1460880-mRNA-1 |
| tig0041113 | CDS | 2699 | 2855 | 2699 | ID=Msa1460880-mRNA-1:cds;Parent=Msa1460880-mRNA-1 |
| tig0041113 | CDS | 2545 | 2605 | 2545 | ID=Msa1460880-mRNA-1:cds;Parent=Msa1460880-mRNA-1 |
| tig0041113 | CDS | 2197 | 2464 | 2197 | ID=Msa1460880-mRNA-1:cds;Parent=Msa1460880-mRNA-1 |
| tig0041113 | CDS | 1846 | 1971 | 1846 | ID=Msa1460880-mRNA-1:cds;Parent=Msa1460880-mRNA-1 |
| tig0041113 | CDS | 588 | 752 | 588 | ID=Msa1460880-mRNA-1:cds;Parent=Msa1460880-mRNA-1 |
| tig0041113 | CDS | 155 | 475 | 155 | ID=Msa1460880-mRNA-1:cds;Parent=Msa1460880-mRNA-1 |
| tig0041113 | three_prime_UTR | 140 | 154 | 140 | ID=Msa1460880-mRNA-1:three_prime_utr;Parent=Msa1460880-mRNA-1 |
| Gene Sequence |
| Protein sequence |
